Rmu_sc0001910.1_g000009

Vegetative cell wall protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001910.1
Physical Location & Seq
Reverse (-)
40129 .. 41685
1557 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001910.1_g000009.1.cds

Sequence Viewer

Length: 1557 bp
atggtgcggccagccccagcaccaaccccgactcctgcaccagccccggctccttccccagccccagccccagctcccgcaccggcaccaaccccggcccctgcaccagtcccggctcctgcaccagccctggctccttccccagccccgactcctgcagcagcccaggcacccaccccgacaccaacccctgcccctgcacctgtggttcgacctacattgaggccgctagctcctcctcctcctgctgaacccactccaccaccagcagcggtccgagctccaactctgccagcaccagcagccccaactccaactccactgccacaagcggtccgagctccaactccgctcgcaccagcagccccaactccaactccacggccactagcagccccagctccaactccacgaccatctgcggtggcacccccaccgattgctgttgctccaacaccaccaccacctctggctgtcactagttctactgcatctgttccgtcgtccccagctcgtggcgttagttttgctccctcaatagcatcccctcctgcaactgcaattgccatcacatccgcttcatcagtaccatcatctcctggaaaggtagccccattctctacatcaggggtgccatctcctaaaagcagggtcactacttcagtgtccgactatccagctacctccagagcagtaccaccaccacagacttctccaccaaaacccgcaactactacaatttcagtgccacgacaaacttattctccacctaaacccagaagcacaaccatttcattacccagtactgctcgggagcctagtccaagttacattccacctaagcctactgtcccgccaccctctcctctcaaactgccaccatctcagttaaggtccagcactgcagatcaaactgatcaaaggattccattagaggttgagcagaagacggtgctggtccaaaagaccattgatcaaaagccgacttcctggttcagtactggagtctcaaagcaggatcatgactctactcgtgaatcccaaaggcctggcaatcatgcccaccatgtaaagcaggaagagaaaatcaccaagaagaagttatcatcttatactgaggaggctccaagcatgagggttataactcttgcaggtgataacaaaggggcttatatggaactcattcgatcccctaataaacatcatgagcaacgtggggagcattctcattatcttttcaagaaaggccacaatggtaagtcggcacagacagttgggagtcatgaatctgataaaagctacagcagcagcagtagtggcgaggaaggtaagccaaaaatgaaggagaaaagtcaccataaaggaattaaggcagggagctcatcactgctacctctgagttcattcacaaacagcaatgttcaaggtatcaacaactccattgtgtacaatagttcctgcactcaccatgacccaggcgtgcaccttgctctcactaggaagcccaatggggatggattcgatgtcaagagccatgttaatggccgacacagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

518

Amino Acids

53.36

Weight (kDa)

10.15

Isoelectric Point (pI)

77.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1142
AarI CACCTGC 1 cut(s) 1142
Acc36I ACCTGC 1 cut(s) 1142
AccB1I GGYRCC 4 cut(s) 85, 169, 427, 631
AccB7I CCANNNNNTGG 1 cut(s) 515
AccBSI CCGCTC 1 cut(s) 352
AclWI GGATC 2 cut(s) 1026, 1182
AcoI YGGCCR 3 cut(s) 8, 383, 1543
AcuI CTGAAG 1 cut(s) 645
AfaI GTAC 5 cut(s) 588, 696, 805, 1000, 1448
AfiI CCNNNNNNNGG 1 cut(s) 515
AgsI TTSAA 2 cut(s) 1240, 1424
AhlI ACTAGT 1 cut(s) 479
AjnI CCWGG 6 cut(s) 129, 165, 598, 989, 1048, 1474
AluBI AGCT 9 cut(s) 74, 233, 281, 341, 401, 512, 680, 1299, 1380
AluI AGCT 9 cut(s) 74, 233, 281, 341, 401, 512, 680, 1299, 1380
Alw21I GWGCWC 4 cut(s) 283, 343, 1382, 1485
Alw26I GTCTC 1 cut(s) 1012
Alw44I GTGCAC 1 cut(s) 1481
AlwI GGATC 2 cut(s) 1026, 1182
Ama87I CYCGRG 1 cut(s) 810
AoxI GGCC 7 cut(s) 8, 96, 224, 383, 1046, 1246, 1543
ApaLI GTGCAC 1 cut(s) 1481
ApeKI GCWGC 8 cut(s) 158, 161, 269, 302, 362, 392, 1305, 1308
Asp700I GAANNNNTTC 1 cut(s) 1182
AspS9I GGNCC 5 cut(s) 97, 274, 334, 894, 958
AsuC2I CCSGG 3 cut(s) 47, 95, 113
AsuHPI GGTGA 4 cut(s) 1081, 1166, 1346, 1457
AsuNHI GCTAGC 1 cut(s) 229
AvaI CYCGRG 1 cut(s) 810
AvaII GGWCC 4 cut(s) 274, 334, 894, 958
BaeGI GKGCMC 1 cut(s) 1485
BanI GGYRCC 4 cut(s) 85, 169, 427, 631
BanII GRGCYC 3 cut(s) 283, 343, 1382
BauI CACGAG 2 cut(s) 513, 1032
BbsI GAAGAC 1 cut(s) 953
Bbv12I GWGCWC 4 cut(s) 283, 343, 1382, 1485
BbvI GCAGC 8 cut(s) 170, 173, 281, 314, 374, 404, 1317, 1320
BccI CCATC 6 cut(s) 424, 575, 598, 643, 889, 1508
BceAI ACGGC 1 cut(s) 398
BciT130I CCWGG 6 cut(s) 131, 167, 600, 991, 1050, 1476
BclI TGATCA 2 cut(s) 916, 973
BcnI CCSGG 3 cut(s) 47, 95, 113
BcoDI GTCTC 1 cut(s) 1012
BcuI ACTAGT 1 cut(s) 479
BfaI CTAG 5 cut(s) 230, 389, 480, 819, 1497
BfmI CTRYAG 3 cut(s) 156, 903, 1300
BfuAI ACCTGC 1 cut(s) 1142
BmcAI AGTACT 2 cut(s) 805, 1000
Bme1390I CCNGG 9 cut(s) 47, 95, 113, 131, 167, 600, 991, 1050, 1476
Bme18I GGWCC 4 cut(s) 274, 334, 894, 958
BmeT110I CYCGRG 1 cut(s) 810
BmgT120I GGNCC 5 cut(s) 97, 274, 334, 894, 958
BmrFI CCNGG 9 cut(s) 47, 95, 113, 131, 167, 600, 991, 1050, 1476
BmrI ACTGGG 1 cut(s) 795
BmsI GCATC 2 cut(s) 500, 551
BmtI GCTAGC 1 cut(s) 233
BmuI ACTGGG 1 cut(s) 795
BpiI GAAGAC 1 cut(s) 953
BpmI CTGGAG 2 cut(s) 670, 1023
Bpu10I CCTNAGC 1 cut(s) 840
BpuMI CCSGG 3 cut(s) 47, 95, 113
BsaJI CCNNGG 6 cut(s) 45, 93, 129, 165, 380, 1474
BsaXI ACNNNNNCTCC 8 cut(s) 16, 46, 301, 331, 361, 391, 748, 778
Bsc4I CCNNNNNNNGG 1 cut(s) 515
Bse118I RCCGGY 1 cut(s) 82
Bse1I ACTGG 3 cut(s) 107, 801, 1006
Bse3DI GCAATG 1 cut(s) 1423
BseBI CCWGG 6 cut(s) 131, 167, 600, 991, 1050, 1476
BseDI CCNNGG 6 cut(s) 45, 93, 129, 165, 380, 1474
BseGI GGATG 3 cut(s) 542, 572, 1519
BseLI CCNNNNNNNGG 1 cut(s) 515
BseMI GCAATG 1 cut(s) 1423
BseMII CTCAG 3 cut(s) 899, 1107, 1388
BseNI ACTGG 3 cut(s) 107, 801, 1006
BseRI GAGGAG 5 cut(s) 225, 228, 231, 855, 1133
BseSI GKGCMC 1 cut(s) 1485
BseXI GCAGC 8 cut(s) 170, 173, 281, 314, 374, 404, 1317, 1320
BseYI CCCAGC 7 cut(s) 16, 58, 64, 70, 142, 397, 508
BsgI GTGCAG 5 cut(s) 21, 87, 105, 183, 1444
BshFI GGCC 7 cut(s) 10, 98, 226, 385, 1048, 1248, 1545
BshNI GGYRCC 4 cut(s) 85, 169, 427, 631
BsiHKAI GWGCWC 4 cut(s) 283, 343, 1382, 1485
BsiHKCI CYCGRG 1 cut(s) 810
BsiSI CCGG 4 cut(s) 47, 83, 95, 113
BslFI GGGAC 3 cut(s) 95, 490, 836
BslI CCNNNNNNNGG 1 cut(s) 515
BsmAI GTCTC 1 cut(s) 1012
BsmFI GGGAC 3 cut(s) 95, 490, 836
BsmI GAATGC 1 cut(s) 1222
BsnI GGCC 7 cut(s) 10, 98, 226, 385, 1048, 1248, 1545
BsoBI CYCGRG 1 cut(s) 810
Bsp1286I GDGCHC 4 cut(s) 283, 343, 1382, 1485
Bsp1407I TGTACA 1 cut(s) 1446
Bsp143I GATC 5 cut(s) 907, 916, 973, 1018, 1187
BspANI GGCC 7 cut(s) 10, 98, 226, 385, 1048, 1248, 1545
BspCNI CTCAG 3 cut(s) 898, 1108, 1389
BspHI TCATGA 3 cut(s) 1021, 1204, 1282
BspMAI CTGCAG 2 cut(s) 160, 907
BspMI ACCTGC 1 cut(s) 1142
BspOI GCTAGC 1 cut(s) 233
BspPI GGATC 2 cut(s) 1026, 1182
BspT107I GGYRCC 4 cut(s) 85, 169, 427, 631
BsrBI CCGCTC 1 cut(s) 352
BsrDI GCAATG 1 cut(s) 1423
BsrFI RCCGGY 1 cut(s) 82
BsrGI TGTACA 1 cut(s) 1446
BsrI ACTGG 3 cut(s) 107, 801, 1006
BssAI RCCGGY 1 cut(s) 82
BssECI CCNNGG 6 cut(s) 45, 93, 129, 165, 380, 1474
BssMI GATC 5 cut(s) 907, 916, 973, 1018, 1187
BssSI CACGAG 2 cut(s) 513, 1032
Bst2BI CACGAG 2 cut(s) 513, 1032
Bst2UI CCWGG 6 cut(s) 131, 167, 600, 991, 1050, 1476
Bst4CI ACNGT 4 cut(s) 850, 952, 1273, 1553
Bst6I CTCTTC 1 cut(s) 1074
BstAUI TGTACA 1 cut(s) 1446
BstC8I GCNNGC 5 cut(s) 12, 231, 294, 354, 1481
BstDEI CTNAG 4 cut(s) 840, 885, 1116, 1397
BstDSI CCRYGG 1 cut(s) 380
BstF5I GGATG 3 cut(s) 542, 572, 1519
BstKTI GATC 5 cut(s) 910, 919, 976, 1021, 1190
BstMAI GTCTC 1 cut(s) 1012
BstMBI GATC 5 cut(s) 907, 916, 973, 1018, 1187
BstMWI GCNNNNNNNGC 8 cut(s) 167, 278, 302, 338, 362, 398, 1305, 1317
BstNI CCWGG 6 cut(s) 131, 167, 600, 991, 1050, 1476
BstSCI CCNGG 9 cut(s) 45, 93, 111, 129, 165, 598, 989, 1048, 1474
BstSFI CTRYAG 3 cut(s) 156, 903, 1300
BstSLI GKGCMC 1 cut(s) 1485
BstV1I GCAGC 8 cut(s) 170, 173, 281, 314, 374, 404, 1317, 1320
BstV2I GAAGAC 1 cut(s) 953
BstXI CCANNNNNNTGG 2 cut(s) 1049, 1541
BsuRI GGCC 7 cut(s) 10, 98, 226, 385, 1048, 1248, 1545
BtgI CCRYGG 1 cut(s) 380
BtsCI GGATG 3 cut(s) 542, 572, 1519
BtsI GCAGTG 3 cut(s) 320, 900, 1385
BtsIMutI CAGTG 5 cut(s) 320, 669, 750, 900, 1385
BveI ACCTGC 1 cut(s) 1142
Cac8I GCNNGC 5 cut(s) 12, 231, 294, 354, 1481
CciI TCATGA 3 cut(s) 1021, 1204, 1282
Cfr10I RCCGGY 1 cut(s) 82
Cfr13I GGNCC 5 cut(s) 97, 274, 334, 894, 958
CpoI CGGWCCG 2 cut(s) 274, 334
Csp6I GTAC 5 cut(s) 587, 695, 804, 999, 1447
CspI CGGWCCG 2 cut(s) 274, 334
CviAII CATG 8 cut(s) 1022, 1058, 1067, 1132, 1205, 1283, 1469, 1535
CviQI GTAC 5 cut(s) 587, 695, 804, 999, 1447
DdeI CTNAG 4 cut(s) 840, 885, 1116, 1397
DpnI GATC 5 cut(s) 909, 918, 975, 1020, 1189
DpnII GATC 5 cut(s) 907, 916, 973, 1018, 1187
EaeI YGGCCR 3 cut(s) 8, 383, 1543
Eam1104I CTCTTC 1 cut(s) 1074
EarI CTCTTC 1 cut(s) 1074
Ecl136II GAGCTC 3 cut(s) 281, 341, 1380
Eco147I AGGCCT 1 cut(s) 1048
Eco24I GRGCYC 3 cut(s) 283, 343, 1382
Eco47I GGWCC 4 cut(s) 274, 334, 894, 958
Eco53kI GAGCTC 3 cut(s) 281, 341, 1380
Eco57I CTGAAG 1 cut(s) 645
Eco88I CYCGRG 1 cut(s) 810
EcoICRI GAGCTC 3 cut(s) 281, 341, 1380
EcoRII CCWGG 6 cut(s) 129, 165, 598, 989, 1048, 1474
EcoT38I GRGCYC 3 cut(s) 283, 343, 1382
FaeI CATG 8 cut(s) 1025, 1061, 1070, 1135, 1208, 1286, 1472, 1538
FaqI GGGAC 3 cut(s) 95, 490, 836
FatI CATG 8 cut(s) 1021, 1057, 1066, 1131, 1204, 1282, 1468, 1534
FauI CCCGC 3 cut(s) 85, 733, 861
FbaI TGATCA 2 cut(s) 916, 973
FokI GGATG 3 cut(s) 529, 559, 1526
FriOI GRGCYC 3 cut(s) 283, 343, 1382
FspBI CTAG 5 cut(s) 230, 389, 480, 819, 1497
GsaI CCCAGC 7 cut(s) 20, 62, 68, 74, 146, 401, 512
GsuI CTGGAG 2 cut(s) 670, 1023
HaeIII GGCC 7 cut(s) 10, 98, 226, 385, 1048, 1248, 1545
HapII CCGG 4 cut(s) 47, 83, 95, 113
Hin1II CATG 8 cut(s) 1025, 1061, 1070, 1135, 1208, 1286, 1472, 1538
HinfI GANTC 9 cut(s) 31, 151, 925, 1005, 1025, 1037, 1279, 1286, 1518
HpaII CCGG 4 cut(s) 47, 83, 95, 113
HphI GGTGA 4 cut(s) 1081, 1166, 1346, 1457
Hpy166II GTNNAC 2 cut(s) 1447, 1483
Hpy188I TCNGA 5 cut(s) 278, 338, 670, 1291, 1398
Hpy188III TCNNGA 8 cut(s) 687, 812, 1022, 1034, 1205, 1240, 1283, 1528
Hpy8I GTNNAC 2 cut(s) 1447, 1483
Hpy99I CGWCG 1 cut(s) 505
HpyAV CCTTC 4 cut(s) 63, 147, 1319, 1336
HpyCH4III ACNGT 4 cut(s) 850, 952, 1273, 1553
HpyCH4IV ACGT 1 cut(s) 1213
HpyF10VI GCNNNNNNNGC 8 cut(s) 167, 278, 302, 338, 362, 398, 1305, 1317
HpyF3I CTNAG 4 cut(s) 840, 885, 1116, 1397
HpySE526I ACGT 1 cut(s) 1213
Hsp92II CATG 8 cut(s) 1025, 1061, 1070, 1135, 1208, 1286, 1472, 1538
Ksp22I TGATCA 2 cut(s) 916, 973
Kzo9I GATC 5 cut(s) 907, 916, 973, 1018, 1187
Lsp1109I GCAGC 8 cut(s) 170, 173, 281, 314, 374, 404, 1317, 1320
LweI GCATC 2 cut(s) 500, 551
MaeI CTAG 5 cut(s) 230, 389, 480, 819, 1497
MaeII ACGT 1 cut(s) 1213
MaeIII GTNAC 4 cut(s) 475, 652, 827, 1352
MalI GATC 5 cut(s) 909, 918, 975, 1020, 1189
MbiI CCGCTC 1 cut(s) 352
MboI GATC 5 cut(s) 907, 916, 973, 1018, 1187
MboII GAAGA 3 cut(s) 958, 1091, 1108
MfeI CAATTG 1 cut(s) 561
MhlI GDGCHC 4 cut(s) 283, 343, 1382, 1485
MluCI AATT 3 cut(s) 561, 738, 1365
MlyI GAGTC 5 cut(s) 25, 145, 1014, 1019, 1288
MmeI TCCRAC 7 cut(s) 308, 338, 368, 398, 428, 476, 693
MroXI GAANNNNTTC 1 cut(s) 1182
MseI TTAA 4 cut(s) 890, 1368, 1539, 1555
MslI CAYNNNNRTG 1 cut(s) 1539
MspA1I CMGCKG 1 cut(s) 272
MspI CCGG 4 cut(s) 47, 83, 95, 113
MspR9I CCNGG 9 cut(s) 47, 95, 113, 131, 167, 600, 991, 1050, 1476
MunI CAATTG 1 cut(s) 561
Mva1269I GAATGC 1 cut(s) 1222
MvaI CCWGG 6 cut(s) 131, 167, 600, 991, 1050, 1476
MwoI GCNNNNNNNGC 8 cut(s) 167, 278, 302, 338, 362, 398, 1305, 1317
NciI CCSGG 3 cut(s) 47, 95, 113
NdeII GATC 5 cut(s) 907, 916, 973, 1018, 1187
NheI GCTAGC 1 cut(s) 229
NlaIII CATG 8 cut(s) 1025, 1061, 1070, 1135, 1208, 1286, 1472, 1538
NmuCI GTSAC 3 cut(s) 475, 652, 1352
PagI TCATGA 3 cut(s) 1021, 1204, 1282
PaqCI CACCTGC 1 cut(s) 1142
PceI AGGCCT 1 cut(s) 1048
PctI GAATGC 1 cut(s) 1222
PdmI GAANNNNTTC 1 cut(s) 1182
PfeI GAWTC 4 cut(s) 925, 1037, 1286, 1518
PflMI CCANNNNNTGG 1 cut(s) 515
PfoI TCCNGGA 1 cut(s) 598
PleI GAGTC 5 cut(s) 25, 145, 1013, 1019, 1287
PpsI GAGTC 5 cut(s) 25, 145, 1013, 1019, 1287
PsiI TTATAA 1 cut(s) 1142
Psp124BI GAGCTC 3 cut(s) 283, 343, 1382
Psp6I CCWGG 6 cut(s) 129, 165, 598, 989, 1048, 1474
PspFI CCCAGC 7 cut(s) 16, 58, 64, 70, 142, 397, 508
PspGI CCWGG 6 cut(s) 129, 165, 598, 989, 1048, 1474
PspPI GGNCC 5 cut(s) 97, 274, 334, 894, 958
PstI CTGCAG 2 cut(s) 160, 907
RsaI GTAC 5 cut(s) 588, 696, 805, 1000, 1448
RsaNI GTAC 5 cut(s) 587, 695, 804, 999, 1447
RseI CAYNNNNRTG 1 cut(s) 1539
Rsr2I CGGWCCG 2 cut(s) 274, 334
RsrII CGGWCCG 2 cut(s) 274, 334
SacI GAGCTC 3 cut(s) 283, 343, 1382
SaqAI TTAA 4 cut(s) 890, 1368, 1539, 1555
Sau3AI GATC 5 cut(s) 907, 916, 973, 1018, 1187
Sau96I GGNCC 5 cut(s) 97, 274, 334, 894, 958
ScaI AGTACT 2 cut(s) 805, 1000
SchI GAGTC 5 cut(s) 25, 145, 1014, 1019, 1288
ScrFI CCNGG 9 cut(s) 47, 95, 113, 131, 167, 600, 991, 1050, 1476
SduI GDGCHC 4 cut(s) 283, 343, 1382, 1485
SfaNI GCATC 2 cut(s) 500, 551
SfcI CTRYAG 3 cut(s) 156, 903, 1300
SinI GGWCC 4 cut(s) 274, 334, 894, 958
SmiMI CAYNNNNRTG 1 cut(s) 1539
SpeI ACTAGT 1 cut(s) 479
Sse9I AATT 3 cut(s) 561, 738, 1365
SseBI AGGCCT 1 cut(s) 1048
SspMI CTAG 5 cut(s) 230, 389, 480, 819, 1497
SstI GAGCTC 3 cut(s) 283, 343, 1382
StuI AGGCCT 1 cut(s) 1048
StyD4I CCNGG 9 cut(s) 45, 93, 111, 129, 165, 598, 989, 1048, 1474
TaaI ACNGT 4 cut(s) 850, 952, 1273, 1553
TaiI ACGT 1 cut(s) 1216
TaqI TCGA 3 cut(s) 211, 1186, 1521
TasI AATT 3 cut(s) 561, 738, 1365
TatI WGTACW 3 cut(s) 803, 998, 1446
TauI GCSGC 2 cut(s) 10, 229
TfiI GAWTC 4 cut(s) 925, 1037, 1286, 1518
Tru1I TTAA 4 cut(s) 890, 1368, 1539, 1555
Tru9I TTAA 4 cut(s) 890, 1368, 1539, 1555
TscAI CASTG 5 cut(s) 327, 669, 750, 907, 1392
TseFI GTSAC 3 cut(s) 475, 652, 1352
TseI GCWGC 8 cut(s) 158, 161, 269, 302, 362, 392, 1305, 1308
Tsp45I GTSAC 3 cut(s) 475, 652, 1352
TspDTI ATGAA 5 cut(s) 570, 783, 1299, 1355, 1392
TspGWI ACGGA 1 cut(s) 489
TspRI CASTG 5 cut(s) 327, 669, 750, 907, 1392
Van91I CCANNNNNTGG 1 cut(s) 515
VneI GTGCAC 1 cut(s) 1481
VpaK11BI GGWCC 4 cut(s) 274, 334, 894, 958
XmnI GAANNNNTTC 1 cut(s) 1182
XspI CTAG 5 cut(s) 230, 389, 480, 819, 1497
ZrmI AGTACT 2 cut(s) 805, 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.