Vegetative cell wall protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46630 |
| fragaria_vesca | FvH4_4g01200 FvH4_4g01200 FvH4_7g17260 |
| prunus_persica | Prupe.2G193900_v2.0.a1 |
| pyrus_communis | pycom07g15240 |
| rosa_chinensis | RchiOBHm_Chr1g0360631 RchiOBHm_Chr3g0484701 |
| rosa_laevigata | RLG00000023206 RLG00000027793 |
| rosa_multiflora | Rmu_sc0001910.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00295940 Rroxscaffold_6G00397490 |
| rosa_rugosa | Rorug01G0280500 Rorug03G0213600 |
| rosa_samantha | Rh1AG292400 Rh1BG257300 Rh1CG275100 Rh1DG287200 Rh3AG263800 Rh3BG298900 Rh3CG296400 Rh3DG292500 |
| rosa_wichuraiana | Rw1G025890 Rw3G023520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1133 |
| Acc36I | ACCTGC | 1 cut(s) | 1133 |
| AccB1I | GGYRCC | 6 cut(s) | 61, 127, 157, 187, 439, 598 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 482 |
| AclI | AACGTT | 1 cut(s) | 1413 |
| AclWI | GGATC | 2 cut(s) | 1017, 1173 |
| AcoI | YGGCCR | 4 cut(s) | 50, 395, 425, 1537 |
| AcuI | CTGAAG | 2 cut(s) | 612, 1101 |
| AfaI | GTAC | 5 cut(s) | 555, 663, 772, 991, 1442 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 48, 482, 1468 |
| AflII | CTTAAG | 1 cut(s) | 818 |
| AgsI | TTSAA | 3 cut(s) | 257, 1231, 1418 |
| AjnI | CCWGG | 3 cut(s) | 565, 980, 1039 |
| Alw21I | GWGCWC | 4 cut(s) | 289, 349, 1376, 1479 |
| Alw26I | GTCTC | 1 cut(s) | 1003 |
| Alw44I | GTGCAC | 1 cut(s) | 1475 |
| AlwI | GGATC | 2 cut(s) | 1017, 1173 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 77, 1452 |
| Ama87I | CYCGRG | 2 cut(s) | 777, 1468 |
| AoxI | GGCC | 8 cut(s) | 50, 230, 395, 425, 828, 1037, 1237, 1537 |
| ApaLI | GTGCAC | 1 cut(s) | 1475 |
| AspS9I | GGNCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| AsuC2I | CCSGG | 8 cut(s) | 59, 89, 125, 155, 185, 446, 1469, 1470 |
| AsuHPI | GGTGA | 4 cut(s) | 1072, 1157, 1340, 1451 |
| AsuNHI | GCTAGC | 1 cut(s) | 235 |
| AvaI | CYCGRG | 2 cut(s) | 777, 1468 |
| AvaII | GGWCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| BaeGI | GKGCMC | 1 cut(s) | 1479 |
| BanI | GGYRCC | 6 cut(s) | 61, 127, 157, 187, 439, 598 |
| BanII | GRGCYC | 3 cut(s) | 289, 349, 1376 |
| BauI | CACGAG | 2 cut(s) | 480, 1023 |
| BbsI | GAAGAC | 1 cut(s) | 944 |
| Bbv12I | GWGCWC | 4 cut(s) | 289, 349, 1376, 1479 |
| BbvCI | CCTCAGC | 1 cut(s) | 502 |
| BccI | CCATC | 8 cut(s) | 436, 475, 542, 565, 589, 610, 880, 1502 |
| BceAI | ACGGC | 2 cut(s) | 410, 440 |
| BciT130I | CCWGG | 3 cut(s) | 567, 982, 1041 |
| BclI | TGATCA | 2 cut(s) | 907, 964 |
| BcnI | CCSGG | 8 cut(s) | 59, 89, 125, 155, 185, 446, 1469, 1470 |
| BcoDI | GTCTC | 1 cut(s) | 1003 |
| BfaI | CTAG | 6 cut(s) | 236, 365, 401, 609, 786, 1491 |
| BfmI | CTRYAG | 2 cut(s) | 894, 1291 |
| BfrI | CTTAAG | 1 cut(s) | 818 |
| BfuAI | ACCTGC | 1 cut(s) | 1133 |
| BlpI | GCTNAGC | 1 cut(s) | 930 |
| BmcAI | AGTACT | 2 cut(s) | 772, 991 |
| Bme18I | GGWCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| BmeT110I | CYCGRG | 2 cut(s) | 777, 1468 |
| BmgT120I | GGNCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| BmiI | GGNNCC | 8 cut(s) | 63, 93, 129, 159, 189, 441, 600, 783 |
| BmrI | ACTGGG | 2 cut(s) | 762, 786 |
| BmsI | GCATC | 3 cut(s) | 14, 467, 518 |
| BmtI | GCTAGC | 1 cut(s) | 239 |
| BmuI | ACTGGG | 2 cut(s) | 762, 786 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1344 |
| BpiI | GAAGAC | 1 cut(s) | 944 |
| BpmI | CTGGAG | 2 cut(s) | 637, 1014 |
| Bpu10I | CCTNAGC | 1 cut(s) | 502 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 930 |
| BpuMI | CCSGG | 8 cut(s) | 59, 89, 125, 155, 185, 446, 1469, 1470 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 48, 482, 1468 |
| Bse1I | ACTGG | 3 cut(s) | 768, 792, 997 |
| BseBI | CCWGG | 3 cut(s) | 567, 982, 1041 |
| BseGI | GGATG | 3 cut(s) | 509, 581, 1513 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 48, 482, 1468 |
| BseMII | CTCAG | 5 cut(s) | 516, 890, 921, 1098, 1382 |
| BseNI | ACTGG | 3 cut(s) | 768, 792, 997 |
| BseRI | GAGGAG | 3 cut(s) | 672, 846, 1124 |
| BseSI | GKGCMC | 1 cut(s) | 1479 |
| BseYI | CCCAGC | 3 cut(s) | 70, 106, 475 |
| BsgI | GTGCAG | 5 cut(s) | 63, 129, 159, 189, 1438 |
| BshFI | GGCC | 8 cut(s) | 52, 232, 397, 427, 830, 1039, 1239, 1539 |
| BshNI | GGYRCC | 6 cut(s) | 61, 127, 157, 187, 439, 598 |
| BsiHKAI | GWGCWC | 4 cut(s) | 289, 349, 1376, 1479 |
| BsiHKCI | CYCGRG | 2 cut(s) | 777, 1468 |
| BsiSI | CCGG | 7 cut(s) | 59, 89, 125, 155, 185, 446, 1469 |
| BslFI | GGGAC | 3 cut(s) | 457, 774, 1015 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 48, 482, 1468 |
| BsmAI | GTCTC | 1 cut(s) | 1003 |
| BsmFI | GGGAC | 3 cut(s) | 457, 774, 1015 |
| BsmI | GAATGC | 1 cut(s) | 1213 |
| BsnI | GGCC | 8 cut(s) | 52, 232, 397, 427, 830, 1039, 1239, 1539 |
| BsoBI | CYCGRG | 2 cut(s) | 777, 1468 |
| Bsp1286I | GDGCHC | 4 cut(s) | 289, 349, 1376, 1479 |
| Bsp1407I | TGTACA | 1 cut(s) | 1440 |
| Bsp143I | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 930 |
| Bsp19I | CCATGG | 1 cut(s) | 42 |
| BspANI | GGCC | 8 cut(s) | 52, 232, 397, 427, 830, 1039, 1239, 1539 |
| BspCNI | CTCAG | 5 cut(s) | 515, 889, 922, 1099, 1383 |
| BspHI | TCATGA | 3 cut(s) | 1012, 1195, 1273 |
| BspLI | GGNNCC | 8 cut(s) | 63, 93, 129, 159, 189, 441, 600, 783 |
| BspMAI | CTGCAG | 1 cut(s) | 898 |
| BspMI | ACCTGC | 1 cut(s) | 1133 |
| BspOI | GCTAGC | 1 cut(s) | 239 |
| BspPI | GGATC | 2 cut(s) | 1017, 1173 |
| BspT107I | GGYRCC | 6 cut(s) | 61, 127, 157, 187, 439, 598 |
| BspTI | CTTAAG | 1 cut(s) | 818 |
| BsrGI | TGTACA | 1 cut(s) | 1440 |
| BsrI | ACTGG | 3 cut(s) | 768, 792, 997 |
| BssMI | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| BssSI | CACGAG | 2 cut(s) | 480, 1023 |
| BssT1I | CCWWGG | 2 cut(s) | 23, 42 |
| Bst2BI | CACGAG | 2 cut(s) | 480, 1023 |
| Bst2UI | CCWGG | 3 cut(s) | 567, 982, 1041 |
| Bst4CI | ACNGT | 4 cut(s) | 943, 1264, 1448, 1547 |
| Bst6I | CTCTTC | 3 cut(s) | 249, 550, 1065 |
| BstAFI | CTTAAG | 1 cut(s) | 818 |
| BstAUI | TGTACA | 1 cut(s) | 1440 |
| BstC8I | GCNNGC | 7 cut(s) | 54, 237, 300, 360, 828, 1325, 1475 |
| BstDEI | CTNAG | 6 cut(s) | 35, 502, 876, 930, 1107, 1391 |
| BstDSI | CCRYGG | 3 cut(s) | 42, 392, 422 |
| BstF5I | GGATG | 3 cut(s) | 509, 581, 1513 |
| BstKTI | GATC | 5 cut(s) | 901, 910, 967, 1012, 1181 |
| BstMAI | GTCTC | 1 cut(s) | 1003 |
| BstMBI | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| BstNI | CCWGG | 3 cut(s) | 567, 982, 1041 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1344 |
| BstSFI | CTRYAG | 2 cut(s) | 894, 1291 |
| BstSLI | GKGCMC | 1 cut(s) | 1479 |
| BstV2I | GAAGAC | 1 cut(s) | 944 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1040, 1535 |
| BsuRI | GGCC | 8 cut(s) | 52, 232, 397, 427, 830, 1039, 1239, 1539 |
| BtgI | CCRYGG | 3 cut(s) | 42, 392, 422 |
| BtsCI | GGATG | 3 cut(s) | 509, 581, 1513 |
| BtsI | GCAGTG | 1 cut(s) | 891 |
| BtsIMutI | CAGTG | 3 cut(s) | 636, 717, 891 |
| BveI | ACCTGC | 1 cut(s) | 1133 |
| Cac8I | GCNNGC | 7 cut(s) | 54, 237, 300, 360, 828, 1325, 1475 |
| CaiI | CAGNNNCTG | 2 cut(s) | 77, 1452 |
| CciI | TCATGA | 3 cut(s) | 1012, 1195, 1273 |
| Cfr13I | GGNCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| Cfr9I | CCCGGG | 1 cut(s) | 1468 |
| CpoI | CGGWCCG | 2 cut(s) | 280, 340 |
| Csp6I | GTAC | 5 cut(s) | 554, 662, 771, 990, 1441 |
| CspI | CGGWCCG | 2 cut(s) | 280, 340 |
| CviQI | GTAC | 5 cut(s) | 554, 662, 771, 990, 1441 |
| DdeI | CTNAG | 6 cut(s) | 35, 502, 876, 930, 1107, 1391 |
| DpnI | GATC | 5 cut(s) | 900, 909, 966, 1011, 1180 |
| DpnII | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| EaeI | YGGCCR | 4 cut(s) | 50, 395, 425, 1537 |
| Eam1104I | CTCTTC | 3 cut(s) | 249, 550, 1065 |
| EarI | CTCTTC | 3 cut(s) | 249, 550, 1065 |
| EciI | GGCGGA | 4 cut(s) | 285, 345, 723, 792 |
| Ecl136II | GAGCTC | 3 cut(s) | 287, 347, 1374 |
| Eco130I | CCWWGG | 2 cut(s) | 23, 42 |
| Eco147I | AGGCCT | 1 cut(s) | 1039 |
| Eco24I | GRGCYC | 3 cut(s) | 289, 349, 1376 |
| Eco47I | GGWCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| Eco53kI | GAGCTC | 3 cut(s) | 287, 347, 1374 |
| Eco57I | CTGAAG | 2 cut(s) | 612, 1101 |
| Eco88I | CYCGRG | 2 cut(s) | 777, 1468 |
| EcoICRI | GAGCTC | 3 cut(s) | 287, 347, 1374 |
| EcoRII | CCWGG | 3 cut(s) | 565, 980, 1039 |
| EcoT14I | CCWWGG | 2 cut(s) | 23, 42 |
| EcoT38I | GRGCYC | 3 cut(s) | 289, 349, 1376 |
| ErhI | CCWWGG | 2 cut(s) | 23, 42 |
| FaqI | GGGAC | 3 cut(s) | 457, 774, 1015 |
| FauI | CCCGC | 3 cut(s) | 367, 700, 852 |
| FbaI | TGATCA | 2 cut(s) | 907, 964 |
| FokI | GGATG | 3 cut(s) | 496, 568, 1520 |
| FriOI | GRGCYC | 3 cut(s) | 289, 349, 1376 |
| FspBI | CTAG | 6 cut(s) | 236, 365, 401, 609, 786, 1491 |
| GsaI | CCCAGC | 3 cut(s) | 74, 110, 479 |
| GsuI | CTGGAG | 2 cut(s) | 637, 1014 |
| HaeIII | GGCC | 8 cut(s) | 52, 232, 397, 427, 830, 1039, 1239, 1539 |
| HapII | CCGG | 7 cut(s) | 59, 89, 125, 155, 185, 446, 1469 |
| HinfI | GANTC | 8 cut(s) | 916, 996, 1016, 1028, 1103, 1270, 1277, 1512 |
| HpaII | CCGG | 7 cut(s) | 59, 89, 125, 155, 185, 446, 1469 |
| HphI | GGTGA | 4 cut(s) | 1072, 1157, 1340, 1451 |
| Hpy166II | GTNNAC | 2 cut(s) | 1441, 1477 |
| Hpy188I | TCNGA | 7 cut(s) | 284, 344, 637, 1102, 1108, 1282, 1392 |
| Hpy188III | TCNNGA | 8 cut(s) | 654, 779, 1013, 1025, 1196, 1231, 1274, 1522 |
| Hpy8I | GTNNAC | 2 cut(s) | 1441, 1477 |
| HpyAV | CCTTC | 2 cut(s) | 1313, 1330 |
| HpyCH4III | ACNGT | 4 cut(s) | 943, 1264, 1448, 1547 |
| HpyCH4IV | ACGT | 2 cut(s) | 1204, 1413 |
| HpyF3I | CTNAG | 6 cut(s) | 35, 502, 876, 930, 1107, 1391 |
| HpySE526I | ACGT | 2 cut(s) | 1204, 1413 |
| Ksp22I | TGATCA | 2 cut(s) | 907, 964 |
| Kzo9I | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| LmnI | GCTCC | 9 cut(s) | 44, 79, 97, 292, 352, 502, 781, 1210, 1371 |
| LweI | GCATC | 3 cut(s) | 14, 467, 518 |
| MaeI | CTAG | 6 cut(s) | 236, 365, 401, 609, 786, 1491 |
| MaeII | ACGT | 2 cut(s) | 1204, 1413 |
| MaeIII | GTNAC | 3 cut(s) | 619, 794, 1346 |
| MalI | GATC | 5 cut(s) | 900, 909, 966, 1011, 1180 |
| MboI | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| MboII | GAAGA | 5 cut(s) | 236, 537, 949, 1082, 1099 |
| MfeI | CAATTG | 1 cut(s) | 528 |
| MhlI | GDGCHC | 4 cut(s) | 289, 349, 1376, 1479 |
| MluCI | AATT | 3 cut(s) | 528, 705, 1359 |
| MlyI | GAGTC | 4 cut(s) | 1005, 1010, 1037, 1279 |
| MmeI | TCCRAC | 7 cut(s) | 314, 344, 374, 404, 410, 440, 660 |
| MseI | TTAA | 4 cut(s) | 819, 881, 1362, 1549 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1533 |
| MspA1I | CMGCKG | 5 cut(s) | 278, 338, 698, 1308, 1384 |
| MspCI | CTTAAG | 1 cut(s) | 818 |
| MspI | CCGG | 7 cut(s) | 59, 89, 125, 155, 185, 446, 1469 |
| MunI | CAATTG | 1 cut(s) | 528 |
| Mva1269I | GAATGC | 1 cut(s) | 1213 |
| MvaI | CCWGG | 3 cut(s) | 567, 982, 1041 |
| NciI | CCSGG | 8 cut(s) | 59, 89, 125, 155, 185, 446, 1469, 1470 |
| NcoI | CCATGG | 1 cut(s) | 42 |
| NdeII | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| NheI | GCTAGC | 1 cut(s) | 235 |
| NlaIV | GGNNCC | 8 cut(s) | 63, 93, 129, 159, 189, 441, 600, 783 |
| NmuCI | GTSAC | 2 cut(s) | 619, 1346 |
| PagI | TCATGA | 3 cut(s) | 1012, 1195, 1273 |
| PaqCI | CACCTGC | 1 cut(s) | 1133 |
| PceI | AGGCCT | 1 cut(s) | 1039 |
| PctI | GAATGC | 1 cut(s) | 1213 |
| PfeI | GAWTC | 4 cut(s) | 916, 1103, 1277, 1512 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 482 |
| PfoI | TCCNGGA | 1 cut(s) | 565 |
| PleI | GAGTC | 4 cut(s) | 1004, 1010, 1036, 1278 |
| PpsI | GAGTC | 4 cut(s) | 1004, 1010, 1036, 1278 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1344 |
| Psp124BI | GAGCTC | 3 cut(s) | 289, 349, 1376 |
| Psp1406I | AACGTT | 1 cut(s) | 1413 |
| Psp6I | CCWGG | 3 cut(s) | 565, 980, 1039 |
| PspFI | CCCAGC | 3 cut(s) | 70, 106, 475 |
| PspGI | CCWGG | 3 cut(s) | 565, 980, 1039 |
| PspN4I | GGNNCC | 8 cut(s) | 63, 93, 129, 159, 189, 441, 600, 783 |
| PspPI | GGNCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| PstI | CTGCAG | 1 cut(s) | 898 |
| PstNI | CAGNNNCTG | 2 cut(s) | 77, 1452 |
| PvuII | CAGCTG | 2 cut(s) | 698, 1384 |
| RsaI | GTAC | 5 cut(s) | 555, 663, 772, 991, 1442 |
| RsaNI | GTAC | 5 cut(s) | 554, 662, 771, 990, 1441 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1533 |
| Rsr2I | CGGWCCG | 2 cut(s) | 280, 340 |
| RsrII | CGGWCCG | 2 cut(s) | 280, 340 |
| SacI | GAGCTC | 3 cut(s) | 289, 349, 1376 |
| SaqAI | TTAA | 4 cut(s) | 819, 881, 1362, 1549 |
| Sau3AI | GATC | 5 cut(s) | 898, 907, 964, 1009, 1178 |
| Sau96I | GGNCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| ScaI | AGTACT | 2 cut(s) | 772, 991 |
| SchI | GAGTC | 4 cut(s) | 1005, 1010, 1037, 1279 |
| SduI | GDGCHC | 4 cut(s) | 289, 349, 1376, 1479 |
| SfaNI | GCATC | 3 cut(s) | 14, 467, 518 |
| SfcI | CTRYAG | 2 cut(s) | 894, 1291 |
| SinI | GGWCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| SmaI | CCCGGG | 1 cut(s) | 1470 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1533 |
| SmlI | CTYRAG | 1 cut(s) | 818 |
| SmoI | CTYRAG | 1 cut(s) | 818 |
| Sse9I | AATT | 3 cut(s) | 528, 705, 1359 |
| SseBI | AGGCCT | 1 cut(s) | 1039 |
| SspMI | CTAG | 6 cut(s) | 236, 365, 401, 609, 786, 1491 |
| SstI | GAGCTC | 3 cut(s) | 289, 349, 1376 |
| StuI | AGGCCT | 1 cut(s) | 1039 |
| StyI | CCWWGG | 2 cut(s) | 23, 42 |
| TaaI | ACNGT | 4 cut(s) | 943, 1264, 1448, 1547 |
| TaiI | ACGT | 2 cut(s) | 1207, 1416 |
| TaqI | TCGA | 3 cut(s) | 31, 217, 1515 |
| TasI | AATT | 3 cut(s) | 528, 705, 1359 |
| TatI | WGTACW | 3 cut(s) | 770, 989, 1440 |
| TauI | GCSGC | 6 cut(s) | 52, 235, 826, 1311, 1314, 1542 |
| TfiI | GAWTC | 4 cut(s) | 916, 1103, 1277, 1512 |
| Tru1I | TTAA | 4 cut(s) | 819, 881, 1362, 1549 |
| Tru9I | TTAA | 4 cut(s) | 819, 881, 1362, 1549 |
| TscAI | CASTG | 3 cut(s) | 636, 717, 898 |
| TseFI | GTSAC | 2 cut(s) | 619, 1346 |
| Tsp45I | GTSAC | 2 cut(s) | 619, 1346 |
| TspDTI | ATGAA | 5 cut(s) | 537, 750, 1290, 1349, 1386 |
| TspMI | CCCGGG | 1 cut(s) | 1468 |
| TspRI | CASTG | 3 cut(s) | 636, 717, 898 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 482 |
| Vha464I | CTTAAG | 1 cut(s) | 818 |
| VneI | GTGCAC | 1 cut(s) | 1475 |
| VpaK11BI | GGWCC | 5 cut(s) | 280, 340, 885, 949, 957 |
| XmaI | CCCGGG | 1 cut(s) | 1468 |
| XspI | CTAG | 6 cut(s) | 236, 365, 401, 609, 786, 1491 |
| ZrmI | AGTACT | 2 cut(s) | 772, 991 |