Vegetative cell wall protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46630 |
| fragaria_vesca | FvH4_4g01200 FvH4_4g01200 FvH4_7g17260 |
| prunus_persica | Prupe.2G193900_v2.0.a1 |
| pyrus_communis | pycom07g15240 |
| rosa_chinensis | RchiOBHm_Chr1g0360631 RchiOBHm_Chr3g0484701 |
| rosa_laevigata | RLG00000023206 RLG00000027793 |
| rosa_multiflora | Rmu_sc0001910.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00295940 Rroxscaffold_6G00397490 |
| rosa_rugosa | Rorug01G0280500 Rorug03G0213600 |
| rosa_samantha | Rh1AG292400 Rh1BG257300 Rh1CG275100 Rh1DG287200 Rh3AG263800 Rh3BG298900 Rh3CG296400 Rh3DG292500 |
| rosa_wichuraiana | Rw1G025890 Rw3G023520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1172 |
| Acc36I | ACCTGC | 1 cut(s) | 1172 |
| AccB1I | GGYRCC | 4 cut(s) | 145, 157, 403, 607 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 491 |
| AclWI | GGATC | 2 cut(s) | 1056, 1212 |
| AcoI | YGGCCR | 4 cut(s) | 50, 359, 389, 1576 |
| AcsI | RAATTY | 1 cut(s) | 1432 |
| AcuI | CTGAAG | 2 cut(s) | 621, 1140 |
| AfaI | GTAC | 5 cut(s) | 564, 672, 781, 1030, 1481 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 48, 491, 832, 1507 |
| AflII | CTTAAG | 1 cut(s) | 827 |
| AgeI | ACCGGT | 1 cut(s) | 412 |
| AgsI | TTSAA | 3 cut(s) | 227, 1270, 1457 |
| AjnI | CCWGG | 3 cut(s) | 153, 1019, 1078 |
| Alw21I | GWGCWC | 4 cut(s) | 259, 319, 1415, 1518 |
| Alw26I | GTCTC | 1 cut(s) | 1042 |
| Alw44I | GTGCAC | 1 cut(s) | 1514 |
| AlwI | GGATC | 2 cut(s) | 1056, 1212 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 77, 95, 1491 |
| Ama87I | CYCGRG | 2 cut(s) | 786, 1507 |
| AoxI | GGCC | 8 cut(s) | 50, 200, 359, 389, 866, 1076, 1276, 1576 |
| ApaLI | GTGCAC | 1 cut(s) | 1514 |
| ApoI | RAATTY | 1 cut(s) | 1432 |
| AsiGI | ACCGGT | 1 cut(s) | 412 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1436 |
| AspLEI | GCGC | 1 cut(s) | 301 |
| AspS9I | GGNCC | 5 cut(s) | 250, 310, 867, 924, 988 |
| AsuC2I | CCSGG | 5 cut(s) | 107, 125, 143, 1508, 1509 |
| AsuHPI | GGTGA | 5 cut(s) | 847, 1111, 1196, 1379, 1490 |
| AsuNHI | GCTAGC | 1 cut(s) | 205 |
| AvaI | CYCGRG | 2 cut(s) | 786, 1507 |
| AvaII | GGWCC | 4 cut(s) | 250, 310, 924, 988 |
| BaeGI | GKGCMC | 1 cut(s) | 1518 |
| BanI | GGYRCC | 4 cut(s) | 145, 157, 403, 607 |
| BanII | GRGCYC | 3 cut(s) | 259, 319, 1415 |
| BauI | CACGAG | 2 cut(s) | 489, 1062 |
| BbsI | GAAGAC | 1 cut(s) | 983 |
| Bbv12I | GWGCWC | 4 cut(s) | 259, 319, 1415, 1518 |
| BbvCI | CCTCAGC | 1 cut(s) | 511 |
| BccI | CCATC | 8 cut(s) | 400, 484, 551, 574, 598, 619, 919, 1541 |
| BceAI | ACGGC | 2 cut(s) | 374, 404 |
| BciT130I | CCWGG | 3 cut(s) | 155, 1021, 1080 |
| BclI | TGATCA | 2 cut(s) | 946, 1003 |
| BcnI | CCSGG | 5 cut(s) | 107, 125, 143, 1508, 1509 |
| BcoDI | GTCTC | 1 cut(s) | 1042 |
| BfaI | CTAG | 7 cut(s) | 206, 335, 365, 618, 795, 861, 1530 |
| BfmI | CTRYAG | 2 cut(s) | 528, 933 |
| BfoI | RGCGCY | 1 cut(s) | 302 |
| BfrI | CTTAAG | 1 cut(s) | 827 |
| BfuAI | ACCTGC | 1 cut(s) | 1172 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 865 |
| BlpI | GCTNAGC | 1 cut(s) | 969 |
| BmcAI | AGTACT | 2 cut(s) | 781, 1030 |
| Bme1390I | CCNGG | 8 cut(s) | 107, 125, 143, 155, 1021, 1080, 1508, 1509 |
| Bme18I | GGWCC | 4 cut(s) | 250, 310, 924, 988 |
| BmeT110I | CYCGRG | 2 cut(s) | 786, 1507 |
| BmgT120I | GGNCC | 5 cut(s) | 250, 310, 867, 924, 988 |
| BmiI | GGNNCC | 7 cut(s) | 111, 129, 147, 159, 405, 609, 792 |
| BmrFI | CCNGG | 8 cut(s) | 107, 125, 143, 155, 1021, 1080, 1508, 1509 |
| BmrI | ACTGGG | 2 cut(s) | 771, 795 |
| BmsI | GCATC | 3 cut(s) | 14, 476, 527 |
| BmtI | GCTAGC | 1 cut(s) | 209 |
| BmuI | ACTGGG | 2 cut(s) | 771, 795 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1383 |
| BpiI | GAAGAC | 1 cut(s) | 983 |
| BpmI | CTGGAG | 3 cut(s) | 279, 411, 1053 |
| Bpu10I | CCTNAGC | 1 cut(s) | 511 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 969 |
| BpuEI | CTTGAG | 1 cut(s) | 646 |
| BpuMI | CCSGG | 5 cut(s) | 107, 125, 143, 1508, 1509 |
| BsaJI | CCNNGG | 9 cut(s) | 23, 42, 105, 123, 141, 153, 356, 386, 1507 |
| BsaWI | WCCGGW | 1 cut(s) | 412 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 48, 491, 832, 1507 |
| Bse118I | RCCGGY | 2 cut(s) | 412, 832 |
| Bse1I | ACTGG | 3 cut(s) | 777, 801, 1036 |
| Bse3DI | GCAATG | 1 cut(s) | 1456 |
| BseBI | CCWGG | 3 cut(s) | 155, 1021, 1080 |
| BseDI | CCNNGG | 9 cut(s) | 23, 42, 105, 123, 141, 153, 356, 386, 1507 |
| BseGI | GGATG | 4 cut(s) | 518, 548, 590, 1552 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 48, 491, 832, 1507 |
| BseMI | GCAATG | 1 cut(s) | 1456 |
| BseMII | CTCAG | 5 cut(s) | 525, 866, 929, 960, 1137 |
| BseNI | ACTGG | 3 cut(s) | 777, 801, 1036 |
| BseRI | GAGGAG | 3 cut(s) | 681, 885, 1163 |
| BseSI | GKGCMC | 1 cut(s) | 1518 |
| BseX3I | CGGCCG | 1 cut(s) | 1576 |
| BseYI | CCCAGC | 4 cut(s) | 58, 70, 88, 484 |
| BsgI | GTGCAG | 5 cut(s) | 63, 81, 117, 159, 1477 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1579 |
| BshFI | GGCC | 8 cut(s) | 52, 202, 361, 391, 868, 1078, 1278, 1578 |
| BshNI | GGYRCC | 4 cut(s) | 145, 157, 403, 607 |
| BshTI | ACCGGT | 1 cut(s) | 412 |
| BsiEI | CGRYCG | 1 cut(s) | 1579 |
| BsiHKAI | GWGCWC | 4 cut(s) | 259, 319, 1415, 1518 |
| BsiHKCI | CYCGRG | 2 cut(s) | 786, 1507 |
| BsiSI | CCGG | 6 cut(s) | 107, 125, 143, 413, 833, 1508 |
| BslFI | GGGAC | 3 cut(s) | 466, 783, 1054 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 48, 491, 832, 1507 |
| BsmAI | GTCTC | 1 cut(s) | 1042 |
| BsmFI | GGGAC | 3 cut(s) | 466, 783, 1054 |
| BsmI | GAATGC | 1 cut(s) | 1252 |
| BsnI | GGCC | 8 cut(s) | 52, 202, 361, 391, 868, 1078, 1278, 1578 |
| BsoBI | CYCGRG | 2 cut(s) | 786, 1507 |
| Bsp1286I | GDGCHC | 4 cut(s) | 259, 319, 1415, 1518 |
| Bsp1407I | TGTACA | 1 cut(s) | 1479 |
| Bsp143I | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 969 |
| Bsp19I | CCATGG | 1 cut(s) | 42 |
| BspANI | GGCC | 8 cut(s) | 52, 202, 361, 391, 868, 1078, 1278, 1578 |
| BspCNI | CTCAG | 5 cut(s) | 524, 865, 928, 961, 1138 |
| BspHI | TCATGA | 3 cut(s) | 1051, 1234, 1312 |
| BspLI | GGNNCC | 7 cut(s) | 111, 129, 147, 159, 405, 609, 792 |
| BspMAI | CTGCAG | 2 cut(s) | 532, 937 |
| BspMI | ACCTGC | 1 cut(s) | 1172 |
| BspOI | GCTAGC | 1 cut(s) | 209 |
| BspPI | GGATC | 2 cut(s) | 1056, 1212 |
| BspT107I | GGYRCC | 4 cut(s) | 145, 157, 403, 607 |
| BspTI | CTTAAG | 1 cut(s) | 827 |
| BsrDI | GCAATG | 1 cut(s) | 1456 |
| BsrFI | RCCGGY | 2 cut(s) | 412, 832 |
| BsrGI | TGTACA | 1 cut(s) | 1479 |
| BsrI | ACTGG | 3 cut(s) | 777, 801, 1036 |
| BssAI | RCCGGY | 2 cut(s) | 412, 832 |
| BssECI | CCNNGG | 9 cut(s) | 23, 42, 105, 123, 141, 153, 356, 386, 1507 |
| BssMI | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| BssSI | CACGAG | 2 cut(s) | 489, 1062 |
| BssT1I | CCWWGG | 2 cut(s) | 23, 42 |
| Bst2BI | CACGAG | 2 cut(s) | 489, 1062 |
| Bst2UI | CCWGG | 3 cut(s) | 155, 1021, 1080 |
| Bst4CI | ACNGT | 4 cut(s) | 982, 1303, 1487, 1586 |
| Bst6I | CTCTTC | 3 cut(s) | 219, 559, 1104 |
| BstAFI | CTTAAG | 1 cut(s) | 827 |
| BstAUI | TGTACA | 1 cut(s) | 1479 |
| BstC8I | GCNNGC | 7 cut(s) | 54, 207, 270, 330, 866, 1364, 1514 |
| BstDEI | CTNAG | 6 cut(s) | 35, 511, 852, 915, 969, 1146 |
| BstDSI | CCRYGG | 3 cut(s) | 42, 356, 386 |
| BstF5I | GGATG | 4 cut(s) | 518, 548, 590, 1552 |
| BstH2I | RGCGCY | 1 cut(s) | 302 |
| BstHHI | GCGC | 1 cut(s) | 301 |
| BstKTI | GATC | 5 cut(s) | 940, 949, 1006, 1051, 1220 |
| BstMAI | GTCTC | 1 cut(s) | 1042 |
| BstMBI | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| BstMCI | CGRYCG | 1 cut(s) | 1579 |
| BstNI | CCWGG | 3 cut(s) | 155, 1021, 1080 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1383 |
| BstSCI | CCNGG | 8 cut(s) | 105, 123, 141, 153, 1019, 1078, 1506, 1507 |
| BstSFI | CTRYAG | 2 cut(s) | 528, 933 |
| BstSLI | GKGCMC | 1 cut(s) | 1518 |
| BstV2I | GAAGAC | 1 cut(s) | 983 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1079 |
| BstZI | CGGCCG | 1 cut(s) | 1576 |
| BsuRI | GGCC | 8 cut(s) | 52, 202, 361, 391, 868, 1078, 1278, 1578 |
| BtgI | CCRYGG | 3 cut(s) | 42, 356, 386 |
| BtsCI | GGATG | 4 cut(s) | 518, 548, 590, 1552 |
| BtsI | GCAGTG | 2 cut(s) | 930, 1354 |
| BtsIMutI | CAGTG | 4 cut(s) | 645, 726, 930, 1354 |
| BveI | ACCTGC | 1 cut(s) | 1172 |
| Cac8I | GCNNGC | 7 cut(s) | 54, 207, 270, 330, 866, 1364, 1514 |
| CaiI | CAGNNNCTG | 3 cut(s) | 77, 95, 1491 |
| CciI | TCATGA | 3 cut(s) | 1051, 1234, 1312 |
| CfoI | GCGC | 1 cut(s) | 301 |
| Cfr10I | RCCGGY | 2 cut(s) | 412, 832 |
| Cfr13I | GGNCC | 5 cut(s) | 250, 310, 867, 924, 988 |
| Cfr9I | CCCGGG | 1 cut(s) | 1507 |
| CpoI | CGGWCCG | 2 cut(s) | 250, 310 |
| Csp6I | GTAC | 5 cut(s) | 563, 671, 780, 1029, 1480 |
| CspAI | ACCGGT | 1 cut(s) | 412 |
| CspI | CGGWCCG | 2 cut(s) | 250, 310 |
| CviQI | GTAC | 5 cut(s) | 563, 671, 780, 1029, 1480 |
| DdeI | CTNAG | 6 cut(s) | 35, 511, 852, 915, 969, 1146 |
| DpnI | GATC | 5 cut(s) | 939, 948, 1005, 1050, 1219 |
| DpnII | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| EaeI | YGGCCR | 4 cut(s) | 50, 359, 389, 1576 |
| EagI | CGGCCG | 1 cut(s) | 1576 |
| Eam1104I | CTCTTC | 3 cut(s) | 219, 559, 1104 |
| EarI | CTCTTC | 3 cut(s) | 219, 559, 1104 |
| EciI | GGCGGA | 3 cut(s) | 255, 315, 732 |
| Ecl136II | GAGCTC | 3 cut(s) | 257, 317, 1413 |
| EclXI | CGGCCG | 1 cut(s) | 1576 |
| Eco130I | CCWWGG | 2 cut(s) | 23, 42 |
| Eco147I | AGGCCT | 1 cut(s) | 1078 |
| Eco24I | GRGCYC | 3 cut(s) | 259, 319, 1415 |
| Eco47I | GGWCC | 4 cut(s) | 250, 310, 924, 988 |
| Eco52I | CGGCCG | 1 cut(s) | 1576 |
| Eco53kI | GAGCTC | 3 cut(s) | 257, 317, 1413 |
| Eco57I | CTGAAG | 2 cut(s) | 621, 1140 |
| Eco88I | CYCGRG | 2 cut(s) | 786, 1507 |
| EcoICRI | GAGCTC | 3 cut(s) | 257, 317, 1413 |
| EcoRI | GAATTC | 1 cut(s) | 1432 |
| EcoRII | CCWGG | 3 cut(s) | 153, 1019, 1078 |
| EcoT14I | CCWWGG | 2 cut(s) | 23, 42 |
| EcoT38I | GRGCYC | 3 cut(s) | 259, 319, 1415 |
| ErhI | CCWWGG | 2 cut(s) | 23, 42 |
| FaqI | GGGAC | 3 cut(s) | 466, 783, 1054 |
| FauI | CCCGC | 3 cut(s) | 337, 709, 891 |
| FbaI | TGATCA | 2 cut(s) | 946, 1003 |
| FokI | GGATG | 4 cut(s) | 505, 535, 577, 1559 |
| FriOI | GRGCYC | 3 cut(s) | 259, 319, 1415 |
| FspBI | CTAG | 7 cut(s) | 206, 335, 365, 618, 795, 861, 1530 |
| GlaI | GCGC | 1 cut(s) | 300 |
| GsaI | CCCAGC | 4 cut(s) | 62, 74, 92, 488 |
| GsuI | CTGGAG | 3 cut(s) | 279, 411, 1053 |
| HaeII | RGCGCY | 1 cut(s) | 302 |
| HaeIII | GGCC | 8 cut(s) | 52, 202, 361, 391, 868, 1078, 1278, 1578 |
| HapII | CCGG | 6 cut(s) | 107, 125, 143, 413, 833, 1508 |
| HhaI | GCGC | 1 cut(s) | 301 |
| Hin6I | GCGC | 1 cut(s) | 299 |
| HinP1I | GCGC | 1 cut(s) | 299 |
| HincII | GTYRAC | 1 cut(s) | 1573 |
| HindII | GTYRAC | 1 cut(s) | 1573 |
| HinfI | GANTC | 8 cut(s) | 955, 1035, 1055, 1067, 1142, 1309, 1316, 1551 |
| HpaII | CCGG | 6 cut(s) | 107, 125, 143, 413, 833, 1508 |
| HphI | GGTGA | 5 cut(s) | 847, 1111, 1196, 1379, 1490 |
| Hpy166II | GTNNAC | 2 cut(s) | 1516, 1573 |
| Hpy188I | TCNGA | 7 cut(s) | 254, 314, 646, 1141, 1147, 1321, 1431 |
| Hpy188III | TCNNGA | 8 cut(s) | 663, 788, 1052, 1064, 1235, 1270, 1313, 1561 |
| Hpy8I | GTNNAC | 2 cut(s) | 1516, 1573 |
| HpyAV | CCTTC | 2 cut(s) | 1352, 1369 |
| HpyCH4III | ACNGT | 4 cut(s) | 982, 1303, 1487, 1586 |
| HpyCH4IV | ACGT | 1 cut(s) | 1243 |
| HpyF3I | CTNAG | 6 cut(s) | 35, 511, 852, 915, 969, 1146 |
| HpySE526I | ACGT | 1 cut(s) | 1243 |
| HspAI | GCGC | 1 cut(s) | 299 |
| Ksp22I | TGATCA | 2 cut(s) | 946, 1003 |
| Kzo9I | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| LweI | GCATC | 3 cut(s) | 14, 476, 527 |
| MaeI | CTAG | 7 cut(s) | 206, 335, 365, 618, 795, 861, 1530 |
| MaeII | ACGT | 1 cut(s) | 1243 |
| MaeIII | GTNAC | 3 cut(s) | 628, 803, 1385 |
| MalI | GATC | 5 cut(s) | 939, 948, 1005, 1050, 1219 |
| MboI | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| MboII | GAAGA | 5 cut(s) | 206, 546, 988, 1121, 1138 |
| MfeI | CAATTG | 1 cut(s) | 537 |
| MhlI | GDGCHC | 4 cut(s) | 259, 319, 1415, 1518 |
| MluCI | AATT | 3 cut(s) | 537, 1398, 1432 |
| MlyI | GAGTC | 4 cut(s) | 1044, 1049, 1076, 1318 |
| MmeI | TCCRAC | 6 cut(s) | 284, 314, 344, 374, 404, 669 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1436 |
| MseI | TTAA | 4 cut(s) | 828, 920, 1401, 1588 |
| MspA1I | CMGCKG | 5 cut(s) | 248, 308, 533, 707, 1423 |
| MspCI | CTTAAG | 1 cut(s) | 827 |
| MspI | CCGG | 6 cut(s) | 107, 125, 143, 413, 833, 1508 |
| MspR9I | CCNGG | 8 cut(s) | 107, 125, 143, 155, 1021, 1080, 1508, 1509 |
| MunI | CAATTG | 1 cut(s) | 537 |
| Mva1269I | GAATGC | 1 cut(s) | 1252 |
| MvaI | CCWGG | 3 cut(s) | 155, 1021, 1080 |
| NciI | CCSGG | 5 cut(s) | 107, 125, 143, 1508, 1509 |
| NcoI | CCATGG | 1 cut(s) | 42 |
| NdeII | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| NheI | GCTAGC | 1 cut(s) | 205 |
| NlaIV | GGNNCC | 7 cut(s) | 111, 129, 147, 159, 405, 609, 792 |
| NmuCI | GTSAC | 2 cut(s) | 628, 1385 |
| PagI | TCATGA | 3 cut(s) | 1051, 1234, 1312 |
| PaqCI | CACCTGC | 1 cut(s) | 1172 |
| PceI | AGGCCT | 1 cut(s) | 1078 |
| PctI | GAATGC | 1 cut(s) | 1252 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1436 |
| PfeI | GAWTC | 4 cut(s) | 955, 1142, 1316, 1551 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 491 |
| PinAI | ACCGGT | 1 cut(s) | 412 |
| PleI | GAGTC | 4 cut(s) | 1043, 1049, 1075, 1317 |
| PpsI | GAGTC | 4 cut(s) | 1043, 1049, 1075, 1317 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1383 |
| Psp124BI | GAGCTC | 3 cut(s) | 259, 319, 1415 |
| Psp6I | CCWGG | 3 cut(s) | 153, 1019, 1078 |
| PspFI | CCCAGC | 4 cut(s) | 58, 70, 88, 484 |
| PspGI | CCWGG | 3 cut(s) | 153, 1019, 1078 |
| PspN4I | GGNNCC | 7 cut(s) | 111, 129, 147, 159, 405, 609, 792 |
| PspPI | GGNCC | 5 cut(s) | 250, 310, 867, 924, 988 |
| PstI | CTGCAG | 2 cut(s) | 532, 937 |
| PstNI | CAGNNNCTG | 3 cut(s) | 77, 95, 1491 |
| PvuII | CAGCTG | 3 cut(s) | 533, 707, 1423 |
| RsaI | GTAC | 5 cut(s) | 564, 672, 781, 1030, 1481 |
| RsaNI | GTAC | 5 cut(s) | 563, 671, 780, 1029, 1480 |
| Rsr2I | CGGWCCG | 2 cut(s) | 250, 310 |
| RsrII | CGGWCCG | 2 cut(s) | 250, 310 |
| SacI | GAGCTC | 3 cut(s) | 259, 319, 1415 |
| SaqAI | TTAA | 4 cut(s) | 828, 920, 1401, 1588 |
| Sau3AI | GATC | 5 cut(s) | 937, 946, 1003, 1048, 1217 |
| Sau96I | GGNCC | 5 cut(s) | 250, 310, 867, 924, 988 |
| ScaI | AGTACT | 2 cut(s) | 781, 1030 |
| SchI | GAGTC | 4 cut(s) | 1044, 1049, 1076, 1318 |
| ScrFI | CCNGG | 8 cut(s) | 107, 125, 143, 155, 1021, 1080, 1508, 1509 |
| SduI | GDGCHC | 4 cut(s) | 259, 319, 1415, 1518 |
| SfaNI | GCATC | 3 cut(s) | 14, 476, 527 |
| SfcI | CTRYAG | 2 cut(s) | 528, 933 |
| SinI | GGWCC | 4 cut(s) | 250, 310, 924, 988 |
| SmaI | CCCGGG | 1 cut(s) | 1509 |
| SmlI | CTYRAG | 2 cut(s) | 661, 827 |
| SmoI | CTYRAG | 2 cut(s) | 661, 827 |
| Sse9I | AATT | 3 cut(s) | 537, 1398, 1432 |
| SseBI | AGGCCT | 1 cut(s) | 1078 |
| SspMI | CTAG | 7 cut(s) | 206, 335, 365, 618, 795, 861, 1530 |
| SstI | GAGCTC | 3 cut(s) | 259, 319, 1415 |
| StuI | AGGCCT | 1 cut(s) | 1078 |
| StyD4I | CCNGG | 8 cut(s) | 105, 123, 141, 153, 1019, 1078, 1506, 1507 |
| StyI | CCWWGG | 2 cut(s) | 23, 42 |
| TaaI | ACNGT | 4 cut(s) | 982, 1303, 1487, 1586 |
| TaiI | ACGT | 1 cut(s) | 1246 |
| TaqI | TCGA | 3 cut(s) | 31, 187, 1554 |
| TasI | AATT | 3 cut(s) | 537, 1398, 1432 |
| TatI | WGTACW | 3 cut(s) | 779, 1028, 1479 |
| TauI | GCSGC | 2 cut(s) | 52, 205 |
| TfiI | GAWTC | 4 cut(s) | 955, 1142, 1316, 1551 |
| Tru1I | TTAA | 4 cut(s) | 828, 920, 1401, 1588 |
| Tru9I | TTAA | 4 cut(s) | 828, 920, 1401, 1588 |
| TscAI | CASTG | 4 cut(s) | 645, 726, 937, 1354 |
| TseFI | GTSAC | 2 cut(s) | 628, 1385 |
| Tsp45I | GTSAC | 2 cut(s) | 628, 1385 |
| TspDTI | ATGAA | 5 cut(s) | 546, 759, 1329, 1388, 1425 |
| TspMI | CCCGGG | 1 cut(s) | 1507 |
| TspRI | CASTG | 4 cut(s) | 645, 726, 937, 1354 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 491 |
| Vha464I | CTTAAG | 1 cut(s) | 827 |
| VneI | GTGCAC | 1 cut(s) | 1514 |
| VpaK11BI | GGWCC | 4 cut(s) | 250, 310, 924, 988 |
| XapI | RAATTY | 1 cut(s) | 1432 |
| XmaI | CCCGGG | 1 cut(s) | 1507 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1436 |
| XspI | CTAG | 7 cut(s) | 206, 335, 365, 618, 795, 861, 1530 |
| ZrmI | AGTACT | 2 cut(s) | 781, 1030 |