Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0007445

Physical Location & Seq

Genomic Coordinates Reverse (-)

30274951 .. 30283547

Gene Structure 8597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG292500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGTGCGGCCAGCCCCTGCACCAGCCCCGGCTCCTGCACCAGCCCCGGCTCCTGCACCAGCCCCGACTCCCGCACCAGCCCCGGAACCCGCCCCGGAACCAACCCCTGCCCCTGCACCTGTGGTTCGACCTACATTGAGGCCGCTAGCTCCTCCTCCTCCTGCTGAACCCACTCCACCACCACCAGCGGTCCGAGCTCCAACTCCGCCAGCACTAGCAGCCCCAACTCCAACTCCACCGCCACCAGCGGTCCGAGCTCCAACTCCGCCCGCACCAGCAGCCCCAACTCCAACTCCACGGCCCCTAGCAGCCCCAACTCCAACTCCACGGCCATCTGCTGTGGCACCCCCACCGGTTGCTGCTGCTCCAACACCACCTTTGGCTGTGACGAGTTCTACTGCATCTGTTCCATCGTCCCCAGCTCGTGGCGTTAGTTCTGCTCCCTCAGCAGCATCCCCTCCTGCAACTGCAATTGCCATCACATCCTCTTCATCAGTACCATCATCTCCTGGAAAGGTAGCCCCATCCTCTACATCAGGGGTGCCATCTCCTAGAAGCAGGGTCACTACTTCAGTGTCCGACTATCCAGCTACCTCCAGAGCAGTACCACCACCACAGACTTCTCCTCCAAAACCCGCAGCTGCTACAATTTCAGTGCCACGACAAACTTATTCTCCGCCTAAACCCAGAAGCACAACCATTTCATTACCCAGTACTGCTCGGGAGCCTAGTCCCAGTTACATTCCGCCTTCCAGAACCCTTAAGCCGGTGAATAATACCCCACCTCAGTCGCCTAGCAGGCCCAAACCTACTGCCCCGCCACCCTCTCCTCTCAAACTGCCACCATCTCAGTTAAGGTCCAGCACTGCAGATCAAACTGATCAAAGGATTCCATTAGAGGCTGAGCAGAAGACGGTGCTGGTCCAAAAGACCATTGATCAAAAGCCGACTTCCTGGTTCAGTACTGGAGTCTCAAAGCAGGATCATGACTCTACTCGTGAGTCCCAAAGGCCTGGCAATCATGTCCACCATGCAAAGCAAGAAGAGAAAATCACCAAGAAGAAGTTATCATCTGATTCTGAGGAGGCTTCAGGCATGAGGGTCATAACTCTTGCAGGTGATAACAAAGGGGCTTTTATGGAACTCATGCGATCTCCTAATAAACATCATGAGCAACGTGGGGAGCATTCTCATTATCTTTTCAAGAAAGGCCACAATGGTAAGTCGGCACAGACAGTTGGGAGTCATGAATCTGATAAAAGCAGCAGCAGCAGTGGTGAGGAAGGCAAGCCAAAAATGAAGGACAAAAGTCACCACAAAGGAATTAAGGCAGGGAGCTCATCACCTCTGAGTTCATTCACAAACAGCAATGTTCAAGGTATCAACAACTCCATTGTGTACAACAGTTCCTGCACTCACCACGACCCGGGCGTGCACCTTGCTCTCACTAGGAAGCCCAATGGGGATGGATTCGATGTCAAGAGCCATAGACGGGCACGAATCAGGAGAGGCTTCTCCGAGAAACAAGAACTTGGTCACGTCACGGGCATGGTATCAGATAAAGTTGGGTTCTTGATTGGATTGGAGTTGCACCCAGAAGAATCTCGGAGGACTGTTGCTTGTTTCCTCGGAAAAGTGTGGGGCCGGGAGAAAGGAGAAAGGAGAAAGATGAGCATCAAGGGAAGAGCATTAGAAAGGGGTACGGTTGAAGGAGCTTTTAGTCTCTTCTGCATCTGCAGAGATACTGGAGCTCCAAGGGGAAGGACACTACAATCAGAGACCAAGTTTCAGTGCTATAAATACTTTGGATATTACCCTGCATTGACACCTGATGAGGTCAAGGAGCGGATAGAGAGAGATCAGAGGCAAGTTCTCACCTCATCATCTGAAATCGGAGGTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

634

Amino Acids

66.85

Weight (kDa)

10.09

Isoelectric Point (pI)

74.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46630
fragaria_vesca	FvH4_4g01200 FvH4_4g01200 FvH4_7g17260
prunus_persica	Prupe.2G193900_v2.0.a1
pyrus_communis	pycom07g15240
rosa_chinensis	RchiOBHm_Chr1g0360631 RchiOBHm_Chr3g0484701
rosa_laevigata	RLG00000023206 RLG00000027793
rosa_multiflora	Rmu_sc0001910.1_g000009
rosa_roxburghii	Rroxscaffold_4G00295940 Rroxscaffold_6G00397490
rosa_rugosa	Rorug01G0280500 Rorug03G0213600
rosa_samantha	Rh1AG292400 Rh1BG257300 Rh1CG275100 Rh1DG287200 Rh3AG263800 Rh3BG298900 Rh3CG296400 Rh3DG292500
rosa_wichuraiana	Rw1G025890 Rw3G023520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1106
Acc36I	ACCTGC	1 cut(s)	1106
AccB1I	GGYRCC	2 cut(s)	343, 541
AccB7I	CCANNNNNTGG	1 cut(s)	425
AccBSI	CCGCTC	1 cut(s)	1846
AclWI	GGATC	1 cut(s)	990
AcoI	YGGCCR	2 cut(s)	8, 329
AcuI	CTGAAG	2 cut(s)	555, 1074
AfaI	GTAC	6 cut(s)	498, 606, 715, 964, 1400, 1702
AfiI	CCNNNNNNNGG	4 cut(s)	425, 766, 1426, 1492
AflII	CTTAAG	1 cut(s)	761
AgeI	ACCGGT	1 cut(s)	352
AgsI	TTSAA	3 cut(s)	1204, 1376, 1709
AjiI	CACGTC	1 cut(s)	1540
AjnI	CCWGG	3 cut(s)	508, 953, 1012
AluBI	AGCT	9 cut(s)	149, 197, 257, 422, 590, 641, 1338, 1715, 1751
AluI	AGCT	9 cut(s)	149, 197, 257, 422, 590, 641, 1338, 1715, 1751
Alw21I	GWGCWC	5 cut(s)	199, 259, 1340, 1437, 1753
Alw26I	GTCTC	3 cut(s)	976, 1727, 1772
Alw44I	GTGCAC	1 cut(s)	1433
AlwI	GGATC	1 cut(s)	990
AlwNI	CAGNNNCTG	2 cut(s)	17, 1410
Ama87I	CYCGRG	2 cut(s)	720, 1426
AoxI	GGCC	8 cut(s)	8, 140, 299, 329, 800, 1010, 1210, 1642
ApaLI	GTGCAC	1 cut(s)	1433
AsiGI	ACCGGT	1 cut(s)	352
AspS9I	GGNCC	7 cut(s)	190, 250, 300, 801, 858, 922, 1642
AsuC2I	CCSGG	7 cut(s)	29, 47, 83, 95, 1427, 1428, 1646
AsuHPI	GGTGA	8 cut(s)	781, 1045, 1130, 1289, 1304, 1335, 1409, 1867
AsuNHI	GCTAGC	1 cut(s)	145
AvaI	CYCGRG	2 cut(s)	720, 1426
AvaII	GGWCC	4 cut(s)	190, 250, 858, 922
BaeGI	GKGCMC	2 cut(s)	1437, 1498
BanI	GGYRCC	2 cut(s)	343, 541
BanII	GRGCYC	4 cut(s)	199, 259, 1340, 1753
BauI	CACGAG	2 cut(s)	423, 996
BbsI	GAAGAC	1 cut(s)	917
Bbv12I	GWGCWC	5 cut(s)	199, 259, 1340, 1437, 1753
BbvCI	CCTCAGC	1 cut(s)	445
BccI	CCATC	8 cut(s)	340, 418, 485, 508, 532, 553, 853, 1460
BceAI	ACGGC	2 cut(s)	314, 344
BciT130I	CCWGG	3 cut(s)	510, 955, 1014
BclI	TGATCA	2 cut(s)	880, 937
BcnI	CCSGG	7 cut(s)	29, 47, 83, 95, 1427, 1428, 1646
BcoDI	GTCTC	3 cut(s)	976, 1727, 1772
BfaI	CTAG	7 cut(s)	146, 215, 305, 552, 729, 795, 1449
BfmI	CTRYAG	2 cut(s)	867, 1735
BfrI	CTTAAG	1 cut(s)	761
BfuAI	ACCTGC	1 cut(s)	1106
BglI	GCCNNNNNGGC	1 cut(s)	799
BlpI	GCTNAGC	1 cut(s)	903
BmcAI	AGTACT	2 cut(s)	715, 964
Bme18I	GGWCC	4 cut(s)	190, 250, 858, 922
BmeT110I	CYCGRG	2 cut(s)	720, 1426
BmgBI	CACGTC	1 cut(s)	1540
BmgT120I	GGNCC	7 cut(s)	190, 250, 300, 801, 858, 922, 1642
BmiI	GGNNCC	9 cut(s)	33, 51, 87, 99, 302, 345, 543, 726, 1643
BmrI	ACTGGG	2 cut(s)	705, 729
BmsI	GCATC	4 cut(s)	410, 461, 1683, 1740
BmtI	GCTAGC	1 cut(s)	149
BmuI	ACTGGG	2 cut(s)	705, 729
BoxI	GACNNNNGTC	1 cut(s)	1308
BpiI	GAAGAC	1 cut(s)	917
BpmI	CTGGAG	3 cut(s)	580, 987, 1767
Bpu10I	CCTNAGC	1 cut(s)	445
Bpu1102I	GCTNAGC	1 cut(s)	903
BpuMI	CCSGG	7 cut(s)	29, 47, 83, 95, 1427, 1428, 1646
BsaBI	GATNNNNATC	1 cut(s)	1673
BsaI	GGTCTC	1 cut(s)	1772
BsaJI	CCNNGG	9 cut(s)	27, 45, 81, 93, 296, 326, 1426, 1627, 1754
BsaWI	WCCGGW	1 cut(s)	352
Bsc4I	CCNNNNNNNGG	4 cut(s)	425, 766, 1426, 1492
Bse118I	RCCGGY	2 cut(s)	352, 766
Bse1I	ACTGG	4 cut(s)	711, 735, 970, 1750
Bse3DI	GCAATG	1 cut(s)	1375
Bse8I	GATNNNNATC	1 cut(s)	1673
BseBI	CCWGG	3 cut(s)	510, 955, 1014
BseDI	CCNNGG	9 cut(s)	27, 45, 81, 93, 296, 326, 1426, 1627, 1754
BseGI	GGATG	4 cut(s)	452, 482, 524, 1471
BseJI	GATNNNNATC	1 cut(s)	1673
BseLI	CCNNNNNNNGG	4 cut(s)	425, 766, 1426, 1492
BseMI	GCAATG	1 cut(s)	1375
BseMII	CTCAG	6 cut(s)	459, 800, 863, 894, 1071, 1340
BseNI	ACTGG	4 cut(s)	711, 735, 970, 1750
BseRI	GAGGAG	6 cut(s)	141, 144, 147, 615, 819, 1097
BseSI	GKGCMC	2 cut(s)	1437, 1498
BseYI	CCCAGC	1 cut(s)	418
BsgI	GTGCAG	4 cut(s)	21, 39, 99, 1396
BshFI	GGCC	8 cut(s)	10, 142, 301, 331, 802, 1012, 1212, 1644
BshNI	GGYRCC	2 cut(s)	343, 541
BshTI	ACCGGT	1 cut(s)	352
BsiHKAI	GWGCWC	5 cut(s)	199, 259, 1340, 1437, 1753
BsiHKCI	CYCGRG	2 cut(s)	720, 1426
BsiSI	CCGG	8 cut(s)	29, 47, 83, 95, 353, 767, 1427, 1645
BslFI	GGGAC	3 cut(s)	400, 717, 988
BslI	CCNNNNNNNGG	4 cut(s)	425, 766, 1426, 1492
BsmAI	GTCTC	3 cut(s)	976, 1727, 1772
BsmFI	GGGAC	3 cut(s)	400, 717, 988
BsmI	GAATGC	1 cut(s)	1186
BsnI	GGCC	8 cut(s)	10, 142, 301, 331, 802, 1012, 1212, 1644
Bso31I	GGTCTC	1 cut(s)	1772
BsoBI	CYCGRG	2 cut(s)	720, 1426
Bsp1286I	GDGCHC	6 cut(s)	199, 259, 1340, 1437, 1498, 1753
Bsp1407I	TGTACA	1 cut(s)	1398
Bsp143I	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
Bsp1720I	GCTNAGC	1 cut(s)	903
BspANI	GGCC	8 cut(s)	10, 142, 301, 331, 802, 1012, 1212, 1644
BspCNI	CTCAG	6 cut(s)	458, 799, 862, 895, 1072, 1341
BspHI	TCATGA	3 cut(s)	985, 1168, 1246
BspLI	GGNNCC	9 cut(s)	33, 51, 87, 99, 302, 345, 543, 726, 1643
BspMAI	CTGCAG	2 cut(s)	871, 1739
BspMI	ACCTGC	1 cut(s)	1106
BspOI	GCTAGC	1 cut(s)	149
BspPI	GGATC	1 cut(s)	990
BspQI	GCTCTTC	1 cut(s)	1678
BspT107I	GGYRCC	2 cut(s)	343, 541
BspTI	CTTAAG	1 cut(s)	761
BspTNI	GGTCTC	1 cut(s)	1772
BsrBI	CCGCTC	1 cut(s)	1846
BsrDI	GCAATG	1 cut(s)	1375
BsrFI	RCCGGY	2 cut(s)	352, 766
BsrGI	TGTACA	1 cut(s)	1398
BsrI	ACTGG	4 cut(s)	711, 735, 970, 1750
BssAI	RCCGGY	2 cut(s)	352, 766
BssECI	CCNNGG	9 cut(s)	27, 45, 81, 93, 296, 326, 1426, 1627, 1754
BssMI	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
BssSI	CACGAG	2 cut(s)	423, 996
BssT1I	CCWWGG	1 cut(s)	1754
Bst2BI	CACGAG	2 cut(s)	423, 996
Bst2UI	CCWGG	3 cut(s)	510, 955, 1014
Bst4CI	ACNGT	5 cut(s)	916, 1237, 1406, 1615, 1705
Bst6I	CTCTTC	4 cut(s)	493, 1038, 1678, 1730
BstAFI	CTTAAG	1 cut(s)	761
BstAUI	TGTACA	1 cut(s)	1398
BstC8I	GCNNGC	7 cut(s)	12, 147, 210, 270, 800, 1289, 1433
BstDEI	CTNAG	6 cut(s)	445, 786, 849, 903, 1080, 1349
BstDSI	CCRYGG	2 cut(s)	296, 326
BstF5I	GGATG	4 cut(s)	452, 482, 524, 1471
BstKTI	GATC	6 cut(s)	874, 883, 940, 985, 1154, 1861
BstMAI	GTCTC	3 cut(s)	976, 1727, 1772
BstMBI	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
BstMWI	GCNNNNNNNGC	7 cut(s)	194, 218, 254, 278, 446, 799, 1269
BstNI	CCWGG	3 cut(s)	510, 955, 1014
BstPAI	GACNNNNGTC	1 cut(s)	1308
BstSFI	CTRYAG	2 cut(s)	867, 1735
BstSLI	GKGCMC	2 cut(s)	1437, 1498
BstV2I	GAAGAC	1 cut(s)	917
BstXI	CCANNNNNNTGG	1 cut(s)	1013
BsuRI	GGCC	8 cut(s)	10, 142, 301, 331, 802, 1012, 1212, 1644
BtgI	CCRYGG	2 cut(s)	296, 326
BtrI	CACGTC	1 cut(s)	1540
BtsCI	GGATG	4 cut(s)	452, 482, 524, 1471
BtsI	GCAGTG	2 cut(s)	864, 1279
BtsIMutI	CAGTG	5 cut(s)	579, 660, 864, 1279, 1796
BveI	ACCTGC	1 cut(s)	1106
Cac8I	GCNNGC	7 cut(s)	12, 147, 210, 270, 800, 1289, 1433
CaiI	CAGNNNCTG	2 cut(s)	17, 1410
CciI	TCATGA	3 cut(s)	985, 1168, 1246
Cfr10I	RCCGGY	2 cut(s)	352, 766
Cfr13I	GGNCC	7 cut(s)	190, 250, 300, 801, 858, 922, 1642
Cfr9I	CCCGGG	1 cut(s)	1426
CpoI	CGGWCCG	2 cut(s)	190, 250
Csp6I	GTAC	6 cut(s)	497, 605, 714, 963, 1399, 1701
CspAI	ACCGGT	1 cut(s)	352
CspI	CGGWCCG	2 cut(s)	190, 250
CviAII	CATG	8 cut(s)	986, 1022, 1031, 1096, 1147, 1169, 1247, 1549
CviQI	GTAC	6 cut(s)	497, 605, 714, 963, 1399, 1701
DdeI	CTNAG	6 cut(s)	445, 786, 849, 903, 1080, 1349
DpnI	GATC	6 cut(s)	873, 882, 939, 984, 1153, 1860
DpnII	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
EaeI	YGGCCR	2 cut(s)	8, 329
Eam1104I	CTCTTC	4 cut(s)	493, 1038, 1678, 1730
EarI	CTCTTC	4 cut(s)	493, 1038, 1678, 1730
EciI	GGCGGA	4 cut(s)	195, 255, 666, 735
Ecl136II	GAGCTC	4 cut(s)	197, 257, 1338, 1751
Eco130I	CCWWGG	1 cut(s)	1754
Eco147I	AGGCCT	1 cut(s)	1012
Eco24I	GRGCYC	4 cut(s)	199, 259, 1340, 1753
Eco31I	GGTCTC	1 cut(s)	1772
Eco47I	GGWCC	4 cut(s)	190, 250, 858, 922
Eco53kI	GAGCTC	4 cut(s)	197, 257, 1338, 1751
Eco57I	CTGAAG	2 cut(s)	555, 1074
Eco88I	CYCGRG	2 cut(s)	720, 1426
EcoICRI	GAGCTC	4 cut(s)	197, 257, 1338, 1751
EcoRII	CCWGG	3 cut(s)	508, 953, 1012
EcoT14I	CCWWGG	1 cut(s)	1754
EcoT38I	GRGCYC	4 cut(s)	199, 259, 1340, 1753
ErhI	CCWWGG	1 cut(s)	1754
FaeI	CATG	8 cut(s)	989, 1025, 1034, 1099, 1150, 1172, 1250, 1552
FaqI	GGGAC	3 cut(s)	400, 717, 988
FatI	CATG	8 cut(s)	985, 1021, 1030, 1095, 1146, 1168, 1246, 1548
FauI	CCCGC	5 cut(s)	79, 97, 277, 643, 825
FbaI	TGATCA	2 cut(s)	880, 937
FokI	GGATG	4 cut(s)	439, 469, 511, 1478
FriOI	GRGCYC	4 cut(s)	199, 259, 1340, 1753
FspBI	CTAG	7 cut(s)	146, 215, 305, 552, 729, 795, 1449
GsaI	CCCAGC	1 cut(s)	422
GsuI	CTGGAG	3 cut(s)	580, 987, 1767
HaeIII	GGCC	8 cut(s)	10, 142, 301, 331, 802, 1012, 1212, 1644
HapII	CCGG	8 cut(s)	29, 47, 83, 95, 353, 767, 1427, 1645
Hin1II	CATG	8 cut(s)	989, 1025, 1034, 1099, 1150, 1172, 1250, 1552
HpaII	CCGG	8 cut(s)	29, 47, 83, 95, 353, 767, 1427, 1645
HphI	GGTGA	8 cut(s)	781, 1045, 1130, 1289, 1304, 1335, 1409, 1867
Hpy166II	GTNNAC	3 cut(s)	1027, 1399, 1435
Hpy8I	GTNNAC	3 cut(s)	1027, 1399, 1435
HpyAV	CCTTC	5 cut(s)	759, 1277, 1294, 1703, 1755
HpyCH4III	ACNGT	5 cut(s)	916, 1237, 1406, 1615, 1705
HpyCH4IV	ACGT	2 cut(s)	1177, 1539
HpyF10VI	GCNNNNNNNGC	7 cut(s)	194, 218, 254, 278, 446, 799, 1269
HpyF3I	CTNAG	6 cut(s)	445, 786, 849, 903, 1080, 1349
HpySE526I	ACGT	2 cut(s)	1177, 1539
Hsp92II	CATG	8 cut(s)	989, 1025, 1034, 1099, 1150, 1172, 1250, 1552
Ksp22I	TGATCA	2 cut(s)	880, 937
Kzo9I	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
LguI	GCTCTTC	1 cut(s)	1678
LweI	GCATC	4 cut(s)	410, 461, 1683, 1740
MaeI	CTAG	7 cut(s)	146, 215, 305, 552, 729, 795, 1449
MaeII	ACGT	2 cut(s)	1177, 1539
MaeIII	GTNAC	6 cut(s)	385, 562, 737, 1310, 1535, 1540
MalI	GATC	6 cut(s)	873, 882, 939, 984, 1153, 1860
MbiI	CCGCTC	1 cut(s)	1846
MboI	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
MboII	GAAGA	7 cut(s)	480, 922, 1055, 1072, 1610, 1695, 1717
MfeI	CAATTG	1 cut(s)	471
MhlI	GDGCHC	6 cut(s)	199, 259, 1340, 1437, 1498, 1753
MluCI	AATT	3 cut(s)	471, 648, 1323
MlyI	GAGTC	5 cut(s)	61, 978, 983, 1010, 1252
MmeI	TCCRAC	7 cut(s)	224, 254, 284, 314, 344, 392, 603
MseI	TTAA	4 cut(s)	762, 854, 1326, 1903
MslI	CAYNNNNRTG	1 cut(s)	1547
MspA1I	CMGCKG	3 cut(s)	188, 248, 641
MspCI	CTTAAG	1 cut(s)	761
MspI	CCGG	8 cut(s)	29, 47, 83, 95, 353, 767, 1427, 1645
MunI	CAATTG	1 cut(s)	471
Mva1269I	GAATGC	1 cut(s)	1186
MvaI	CCWGG	3 cut(s)	510, 955, 1014
MwoI	GCNNNNNNNGC	7 cut(s)	194, 218, 254, 278, 446, 799, 1269
NciI	CCSGG	7 cut(s)	29, 47, 83, 95, 1427, 1428, 1646
NdeII	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
NheI	GCTAGC	1 cut(s)	145
NlaIII	CATG	8 cut(s)	989, 1025, 1034, 1099, 1150, 1172, 1250, 1552
NlaIV	GGNNCC	9 cut(s)	33, 51, 87, 99, 302, 345, 543, 726, 1643
NmuCI	GTSAC	5 cut(s)	385, 562, 1310, 1535, 1540
PagI	TCATGA	3 cut(s)	985, 1168, 1246
PaqCI	CACCTGC	1 cut(s)	1106
PceI	AGGCCT	1 cut(s)	1012
PciSI	GCTCTTC	1 cut(s)	1678
PcsI	WCGNNNNNNNCGW	1 cut(s)	1428
PctI	GAATGC	1 cut(s)	1186
PfeI	GAWTC	6 cut(s)	889, 1076, 1250, 1470, 1500, 1601
PflMI	CCANNNNNTGG	1 cut(s)	425
PfoI	TCCNGGA	1 cut(s)	508
PinAI	ACCGGT	1 cut(s)	352
PleI	GAGTC	5 cut(s)	61, 977, 983, 1009, 1251
PpsI	GAGTC	5 cut(s)	61, 977, 983, 1009, 1251
PshAI	GACNNNNGTC	1 cut(s)	1308
Psp124BI	GAGCTC	4 cut(s)	199, 259, 1340, 1753
Psp6I	CCWGG	3 cut(s)	508, 953, 1012
PspFI	CCCAGC	1 cut(s)	418
PspGI	CCWGG	3 cut(s)	508, 953, 1012
PspN4I	GGNNCC	9 cut(s)	33, 51, 87, 99, 302, 345, 543, 726, 1643
PspPI	GGNCC	7 cut(s)	190, 250, 300, 801, 858, 922, 1642
PstI	CTGCAG	2 cut(s)	871, 1739
PstNI	CAGNNNCTG	2 cut(s)	17, 1410
PvuII	CAGCTG	1 cut(s)	641
RsaI	GTAC	6 cut(s)	498, 606, 715, 964, 1400, 1702
RsaNI	GTAC	6 cut(s)	497, 605, 714, 963, 1399, 1701
RseI	CAYNNNNRTG	1 cut(s)	1547
Rsr2I	CGGWCCG	2 cut(s)	190, 250
RsrII	CGGWCCG	2 cut(s)	190, 250
SacI	GAGCTC	4 cut(s)	199, 259, 1340, 1753
SapI	GCTCTTC	1 cut(s)	1678
SaqAI	TTAA	4 cut(s)	762, 854, 1326, 1903
Sau3AI	GATC	6 cut(s)	871, 880, 937, 982, 1151, 1858
Sau96I	GGNCC	7 cut(s)	190, 250, 300, 801, 858, 922, 1642
ScaI	AGTACT	2 cut(s)	715, 964
SchI	GAGTC	5 cut(s)	61, 978, 983, 1010, 1252
SduI	GDGCHC	6 cut(s)	199, 259, 1340, 1437, 1498, 1753
SfaNI	GCATC	4 cut(s)	410, 461, 1683, 1740
SfcI	CTRYAG	2 cut(s)	867, 1735
SinI	GGWCC	4 cut(s)	190, 250, 858, 922
SmaI	CCCGGG	1 cut(s)	1428
SmiMI	CAYNNNNRTG	1 cut(s)	1547
SmlI	CTYRAG	1 cut(s)	761
SmoI	CTYRAG	1 cut(s)	761
Sse9I	AATT	3 cut(s)	471, 648, 1323
SseBI	AGGCCT	1 cut(s)	1012
SspMI	CTAG	7 cut(s)	146, 215, 305, 552, 729, 795, 1449
SstI	GAGCTC	4 cut(s)	199, 259, 1340, 1753
StuI	AGGCCT	1 cut(s)	1012
StyI	CCWWGG	1 cut(s)	1754
TaaI	ACNGT	5 cut(s)	916, 1237, 1406, 1615, 1705
TaiI	ACGT	2 cut(s)	1180, 1542
TaqI	TCGA	2 cut(s)	127, 1473
TasI	AATT	3 cut(s)	471, 648, 1323
TatI	WGTACW	3 cut(s)	713, 962, 1398
TauI	GCSGC	2 cut(s)	10, 145
TfiI	GAWTC	6 cut(s)	889, 1076, 1250, 1470, 1500, 1601
Tru1I	TTAA	4 cut(s)	762, 854, 1326, 1903
Tru9I	TTAA	4 cut(s)	762, 854, 1326, 1903
TscAI	CASTG	5 cut(s)	579, 660, 871, 1279, 1796
TseFI	GTSAC	5 cut(s)	385, 562, 1310, 1535, 1540
Tsp45I	GTSAC	5 cut(s)	385, 562, 1310, 1535, 1540
TspDTI	ATGAA	5 cut(s)	480, 693, 1263, 1313, 1344
TspMI	CCCGGG	1 cut(s)	1426
TspRI	CASTG	5 cut(s)	579, 660, 871, 1279, 1796
Van91I	CCANNNNNTGG	1 cut(s)	425
Vha464I	CTTAAG	1 cut(s)	761
VneI	GTGCAC	1 cut(s)	1433
VpaK11BI	GGWCC	4 cut(s)	190, 250, 858, 922
XmaI	CCCGGG	1 cut(s)	1426
XspI	CTAG	7 cut(s)	146, 215, 305, 552, 729, 795, 1449
ZrmI	AGTACT	2 cut(s)	715, 964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.