Prupe.2G204100_v2.0.a1
ERF Family

Phosphorylase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0006017
Physical Location & Seq
Forward (+)
23956651 .. 23958744
2094 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G204100.1

Sequence Viewer

Length: 1005 bp
ATGGCTGCAAAACGATTTGCAGCATGTTTTCTTAGGCTGGTTTTGATCTCCCTGCTAGTTGCTTATTCATTTTCTTTACCACTAAACTGGAGATCTTTGAATTTAATCAAAAAGGTAAACCGCGAAGGACCATACATTGGCCTTATCACAGTGTTTCCACCAGAAGAGACTGCCTTTTTTCAGATTGGGGCGTTTAAGCCTAATCAAAAGCATCCTTTTGTGGATCTCTCAGGGCGGCGATTCCTGGTGGGAAAGATCCATGACAAGAAAGTAGTCTATGTGAGATGTGGAGTTGGGATGATGAATGCTGCTGCAGCAACACAGCAAATGCTGGATCTATTTGACATTCTGGGAATTGTCCATTTTGGCATTGCTGGAAATGCCAACAATTCCTTGTCTATAGGTGATGTGACCATTCCTCAACAGTTTTCTCACACTGGCATTTGGGATTGGCTGAACTCAAATCGATCTTTGAATTACGATGAAGCAAGCTTGGACTTTAAAAGATACAATGTACCAAGAGGAGATAACCTGTTGGGACACATTGGATTTAGATATGAACAATTTTTTTCTGAGTACGGGAAGGCCAACACTGCTCGGCGGCTGTTTTGGGCAAATACTACTCGGCAGTGGCTTCAGGTTGCTGCCAACTTGAAGGGGATCAAACTGAACCAATGTTTGAATTCAAGTGTGTGTCTGCCACAGAAGCCGCAGTTAGTTGTTGGTCTTAGGGGCTCAACAGCCAATATTTTTGTGGACAATGCAGCTTACAGGGACTTCCTTTTTCAAACTTTTCGAGTTTCATCCGTGGACATGGAAAGTTCAGCTGTGGTAATGACAAGCTTGTCAAATGGCTTCCCGGTGATCGTCATTCGAGGGCTATCCGATCTTGCAGGAGGACAATCAGGACATAACTCAATTGACACCTTTGGGTCTCTTGCAGCTATAAACGCTTGCAAAGTAGTTGTACAATTTATCAAGCAACTGCATCATGATACTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PNP_UDP_1

Protein Analysis

335

Amino Acids

37.19

Weight (kDa)

9.63

Isoelectric Point (pI)

28.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 844
AccB7I CCANNNNNTGG 1 cut(s) 137
AccII CGCG 1 cut(s) 123
AciI CCGC 4 cut(s) 121, 235, 601, 710
AclWI GGATC 4 cut(s) 231, 250, 342, 668
AcsI RAATTY 2 cut(s) 100, 682
AcuI CTGAAG 1 cut(s) 620
AfaI GTAC 3 cut(s) 516, 578, 969
AfiI CCNNNNNNNGG 1 cut(s) 137
AgsI TTSAA 6 cut(s) 100, 475, 655, 682, 687, 788
AjnI CCWGG 1 cut(s) 243
AluBI AGCT 5 cut(s) 492, 767, 827, 843, 944
AluI AGCT 5 cut(s) 492, 767, 827, 843, 944
Alw26I GTCTC 2 cut(s) 161, 939
AlwI GGATC 4 cut(s) 231, 250, 342, 668
AoxI GGCC 2 cut(s) 139, 585
ApeKI GCWGC 8 cut(s) 5, 20, 308, 311, 314, 644, 764, 941
ApoI RAATTY 2 cut(s) 100, 682
AspS9I GGNCC 1 cut(s) 128
AsuC2I CCSGG 1 cut(s) 860
AsuHPI GGTGA 2 cut(s) 416, 874
AvaII GGWCC 1 cut(s) 128
BanII GRGCYC 1 cut(s) 737
BbvI GCAGC 7 cut(s) 32, 295, 298, 326, 631, 776, 953
BciT130I CCWGG 1 cut(s) 245
BcnI CCSGG 1 cut(s) 860
BcoDI GTCTC 2 cut(s) 161, 939
BfaI CTAG 2 cut(s) 56, 999
BfmI CTRYAG 2 cut(s) 312, 399
BglII AGATCT 1 cut(s) 92
Bme1390I CCNGG 2 cut(s) 245, 860
Bme18I GGWCC 1 cut(s) 128
BmgT120I GGNCC 1 cut(s) 128
BmrFI CCNGG 2 cut(s) 245, 860
BmsI GCATC 2 cut(s) 220, 997
BpmI CTGGAG 1 cut(s) 109
BpuMI CCSGG 1 cut(s) 860
Bsa29I ATCGAT 1 cut(s) 466
BsaI GGTCTC 1 cut(s) 939
BsaJI CCNNGG 1 cut(s) 807
Bsc4I CCNNNNNNNGG 1 cut(s) 137
Bse1I ACTGG 2 cut(s) 92, 442
Bse3DI GCAATG 1 cut(s) 369
BseBI CCWGG 1 cut(s) 245
BseCI ATCGAT 1 cut(s) 466
BseDI CCNNGG 1 cut(s) 807
BseGI GGATG 3 cut(s) 211, 303, 803
BseLI CCNNNNNNNGG 1 cut(s) 137
BseMI GCAATG 1 cut(s) 369
BseMII CTCAG 2 cut(s) 243, 564
BseNI ACTGG 2 cut(s) 92, 442
BseRI GAGGAG 1 cut(s) 537
BseXI GCAGC 7 cut(s) 32, 295, 298, 326, 631, 776, 953
Bsh1236I CGCG 1 cut(s) 123
BshFI GGCC 2 cut(s) 141, 587
BshVI ATCGAT 1 cut(s) 466
BsiSI CCGG 1 cut(s) 860
BslFI GGGAC 2 cut(s) 552, 788
BslI CCNNNNNNNGG 1 cut(s) 137
BsmAI GTCTC 2 cut(s) 161, 939
BsmFI GGGAC 2 cut(s) 552, 788
BsmI GAATGC 1 cut(s) 310
BsnI GGCC 2 cut(s) 141, 587
Bso31I GGTCTC 1 cut(s) 939
Bsp1286I GDGCHC 1 cut(s) 737
Bsp1407I TGTACA 1 cut(s) 967
Bsp143I GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
BspACI CCGC 4 cut(s) 121, 235, 601, 710
BspANI GGCC 2 cut(s) 141, 587
BspCNI CTCAG 2 cut(s) 242, 565
BspDI ATCGAT 1 cut(s) 466
BspFNI CGCG 1 cut(s) 123
BspHI TCATGA 1 cut(s) 991
BspMAI CTGCAG 1 cut(s) 316
BspPI GGATC 4 cut(s) 231, 250, 342, 668
BspTNI GGTCTC 1 cut(s) 939
BsrDI GCAATG 1 cut(s) 369
BsrGI TGTACA 1 cut(s) 967
BsrI ACTGG 2 cut(s) 92, 442
BssECI CCNNGG 1 cut(s) 807
BssMI GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
Bst2UI CCWGG 1 cut(s) 245
Bst4CI ACNGT 2 cut(s) 151, 426
Bst6I CTCTTC 1 cut(s) 159
BstAUI TGTACA 1 cut(s) 967
BstC8I GCNNGC 2 cut(s) 490, 955
BstDEI CTNAG 4 cut(s) 32, 229, 573, 728
BstDSI CCRYGG 1 cut(s) 807
BstF5I GGATG 3 cut(s) 211, 303, 803
BstFNI CGCG 1 cut(s) 123
BstKTI GATC 9 cut(s) 48, 95, 226, 258, 337, 470, 663, 867, 889
BstMAI GTCTC 2 cut(s) 161, 939
BstMBI GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
BstMWI GCNNNNNNNGC 5 cut(s) 314, 380, 593, 706, 950
BstNI CCWGG 1 cut(s) 245
BstNSI RCATGY 1 cut(s) 27
BstSCI CCNGG 2 cut(s) 243, 858
BstSFI CTRYAG 2 cut(s) 312, 399
BstUI CGCG 1 cut(s) 123
BstV1I GCAGC 7 cut(s) 32, 295, 298, 326, 631, 776, 953
BstX2I RGATCY 4 cut(s) 92, 223, 255, 334
BstXI CCANNNNNNTGG 1 cut(s) 87
BstYI RGATCY 4 cut(s) 92, 223, 255, 334
Bsu15I ATCGAT 1 cut(s) 466
BsuRI GGCC 2 cut(s) 141, 587
BsuTUI ATCGAT 1 cut(s) 466
BtgI CCRYGG 1 cut(s) 807
BtsCI GGATG 3 cut(s) 211, 303, 803
BtsI GCAGTG 2 cut(s) 591, 635
BtsIMutI CAGTG 4 cut(s) 156, 435, 591, 635
Cac8I GCNNGC 2 cut(s) 490, 955
CciI TCATGA 1 cut(s) 991
Cfr13I GGNCC 1 cut(s) 128
ClaI ATCGAT 1 cut(s) 466
Csp6I GTAC 3 cut(s) 515, 577, 968
CviAII CATG 4 cut(s) 24, 260, 814, 992
CviQI GTAC 3 cut(s) 515, 577, 968
DdeI CTNAG 4 cut(s) 32, 229, 573, 728
DpnI GATC 9 cut(s) 47, 94, 225, 257, 336, 469, 662, 866, 888
DpnII GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
DraI TTTAAA 1 cut(s) 502
DrdI GACNNNNNNGTC 1 cut(s) 844
DseDI GACNNNNNNGTC 1 cut(s) 844
Eam1104I CTCTTC 1 cut(s) 159
EarI CTCTTC 1 cut(s) 159
Eco24I GRGCYC 1 cut(s) 737
Eco31I GGTCTC 1 cut(s) 939
Eco47I GGWCC 1 cut(s) 128
Eco57I CTGAAG 1 cut(s) 620
EcoRI GAATTC 1 cut(s) 682
EcoRII CCWGG 1 cut(s) 243
EcoT38I GRGCYC 1 cut(s) 737
FaeI CATG 4 cut(s) 27, 263, 817, 995
FaqI GGGAC 2 cut(s) 552, 788
FatI CATG 4 cut(s) 23, 259, 813, 991
FokI GGATG 3 cut(s) 198, 310, 790
FriOI GRGCYC 1 cut(s) 737
FspBI CTAG 2 cut(s) 56, 999
GsuI CTGGAG 1 cut(s) 109
HaeIII GGCC 2 cut(s) 141, 587
HapII CCGG 1 cut(s) 860
Hin1II CATG 4 cut(s) 27, 263, 817, 995
HindIII AAGCTT 2 cut(s) 490, 841
HinfI GANTC 1 cut(s) 240
HpaII CCGG 1 cut(s) 860
HphI GGTGA 2 cut(s) 416, 874
Hpy166II GTNNAC 3 cut(s) 118, 757, 811
Hpy188I TCNGA 3 cut(s) 183, 574, 886
Hpy188III TCNNGA 2 cut(s) 906, 992
Hpy8I GTNNAC 3 cut(s) 118, 757, 811
HpyAV CCTTC 3 cut(s) 119, 577, 649
HpyCH4III ACNGT 2 cut(s) 151, 426
HpyCH4V TGCA 8 cut(s) 8, 20, 314, 764, 893, 941, 957, 988
HpyF10VI GCNNNNNNNGC 5 cut(s) 314, 380, 593, 706, 950
HpyF3I CTNAG 4 cut(s) 32, 229, 573, 728
Hsp92II CATG 4 cut(s) 27, 263, 817, 995
Kzo9I GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
Lsp1109I GCAGC 7 cut(s) 32, 295, 298, 326, 631, 776, 953
LweI GCATC 2 cut(s) 220, 997
MaeI CTAG 2 cut(s) 56, 999
MaeIII GTNAC 1 cut(s) 409
MalI GATC 9 cut(s) 47, 94, 225, 257, 336, 469, 662, 866, 888
MboI GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
MboII GAAGA 1 cut(s) 176
MfeI CAATTG 1 cut(s) 918
MflI RGATCY 4 cut(s) 92, 223, 255, 334
MhlI GDGCHC 1 cut(s) 737
MluCI AATT 8 cut(s) 100, 354, 388, 475, 563, 682, 918, 971
MnlI CCTC 4 cut(s) 429, 515, 869, 890
MseI TTAA 3 cut(s) 104, 195, 501
MspA1I CMGCKG 1 cut(s) 827
MspI CCGG 1 cut(s) 860
MspR9I CCNGG 2 cut(s) 245, 860
MunI CAATTG 1 cut(s) 918
Mva1269I GAATGC 1 cut(s) 310
MvaI CCWGG 1 cut(s) 245
MvnI CGCG 1 cut(s) 123
MwoI GCNNNNNNNGC 5 cut(s) 314, 380, 593, 706, 950
NciI CCSGG 1 cut(s) 860
NdeII GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
NlaIII CATG 4 cut(s) 27, 263, 817, 995
NmeAIII GCCGAG 2 cut(s) 577, 604
NmuCI GTSAC 1 cut(s) 409
NspI RCATGY 1 cut(s) 27
PagI TCATGA 1 cut(s) 991
PctI GAATGC 1 cut(s) 310
PfeI GAWTC 1 cut(s) 240
PflMI CCANNNNNTGG 1 cut(s) 137
Psp6I CCWGG 1 cut(s) 243
PspGI CCWGG 1 cut(s) 243
PspPI GGNCC 1 cut(s) 128
PstI CTGCAG 1 cut(s) 316
PsuI RGATCY 4 cut(s) 92, 223, 255, 334
PvuII CAGCTG 1 cut(s) 827
RsaI GTAC 3 cut(s) 516, 578, 969
RsaNI GTAC 3 cut(s) 515, 577, 968
SaqAI TTAA 3 cut(s) 104, 195, 501
Sau3AI GATC 9 cut(s) 45, 92, 223, 255, 334, 467, 660, 864, 886
Sau96I GGNCC 1 cut(s) 128
ScrFI CCNGG 2 cut(s) 245, 860
SduI GDGCHC 1 cut(s) 737
SfaNI GCATC 2 cut(s) 220, 997
SfcI CTRYAG 2 cut(s) 312, 399
SinI GGWCC 1 cut(s) 128
Sse9I AATT 8 cut(s) 100, 354, 388, 475, 563, 682, 918, 971
SsiI CCGC 4 cut(s) 121, 235, 601, 710
SspI AATATT 1 cut(s) 748
SspMI CTAG 2 cut(s) 56, 999
StyD4I CCNGG 2 cut(s) 243, 858
TaaI ACNGT 2 cut(s) 151, 426
TaqI TCGA 3 cut(s) 466, 796, 874
TasI AATT 8 cut(s) 100, 354, 388, 475, 563, 682, 918, 971
TatI WGTACW 1 cut(s) 967
TauI GCSGC 3 cut(s) 238, 604, 712
TfiI GAWTC 1 cut(s) 240
Tru1I TTAA 3 cut(s) 104, 195, 501
Tru9I TTAA 3 cut(s) 104, 195, 501
TscAI CASTG 4 cut(s) 156, 442, 598, 635
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 8 cut(s) 5, 20, 308, 311, 314, 644, 764, 941
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 5 cut(s) 57, 317, 498, 573, 792
TspGWI ACGGA 1 cut(s) 796
TspRI CASTG 4 cut(s) 156, 442, 598, 635
Van91I CCANNNNNTGG 1 cut(s) 137
VpaK11BI GGWCC 1 cut(s) 128
XapI RAATTY 2 cut(s) 100, 682
XceI RCATGY 1 cut(s) 27
XcmI CCANNNNNNNNNTGG 1 cut(s) 751
XspI CTAG 2 cut(s) 56, 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.