Prupe.2G204400_v2.0.a1
ERF Family

Phosphorylase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0006017
Physical Location & Seq
Forward (+)
23967624 .. 23969962
2339 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G204400.2

Sequence Viewer

Length: 438 bp
ATGAAGAGACATAAAATTGGTAATTTTTATCCACTATATTTGAGCCTTCAGGATTTTCATTCCTTGAAACCACTTCTCAATCAGAAGAATGCTGCTGCAGCAACACAGCAAATGCTGGATCTATTTGACATTCTGGGAATTGCCAATTTTGGCATTGCTGGAAATGCCAACAATTCCTTGTCTATTGGTGATGTGACCTTTCCTCAACACTTTTCTCACACTGGCATTTGGGATTGGCTGACAAGCTTGTCAAATGGCTTCCCAGTAATCGTCATTCGAGGGCTATCTGATCTTGCAGGAGGACAATCAGGACATAAATCAATTGACACCTTTGGGTCTCTTGCAGCTATAAACGCTTGCAAAGTTGTTGTACAATTTATCAAGCAACTGCATCTTGATACTAGGGAACCTGGCTTCCCAAGATCTATATACCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PNP_UDP_1

Protein Analysis

146

Amino Acids

15.9

Weight (kDa)

8.82

Isoelectric Point (pI)

32.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 247
AclWI GGATC 1 cut(s) 126
AcuI CTGAAG 1 cut(s) 32
AfaI GTAC 1 cut(s) 372
AgsI TTSAA 1 cut(s) 67
AjnI CCWGG 1 cut(s) 409
AloI GAACNNNNNNTCC 2 cut(s) 399, 431
AluBI AGCT 2 cut(s) 246, 347
AluI AGCT 2 cut(s) 246, 347
Alw26I GTCTC 1 cut(s) 342
AlwI GGATC 1 cut(s) 126
ApeKI GCWGC 4 cut(s) 92, 95, 98, 344
AsuHPI GGTGA 1 cut(s) 200
BbvI GCAGC 4 cut(s) 79, 82, 110, 356
BciT130I CCWGG 1 cut(s) 411
BcoDI GTCTC 1 cut(s) 342
BfaI CTAG 1 cut(s) 402
BfmI CTRYAG 1 cut(s) 96
BglII AGATCT 1 cut(s) 422
BisI GCNGC 4 cut(s) 93, 96, 99, 345
BlsI GCNGC 4 cut(s) 94, 97, 100, 346
Bme1390I CCNGG 1 cut(s) 411
BmiI GGNNCC 1 cut(s) 408
BmrFI CCNGG 1 cut(s) 411
BmrI ACTGGG 1 cut(s) 257
BmsI GCATC 1 cut(s) 400
BmuI ACTGGG 1 cut(s) 257
BsaI GGTCTC 1 cut(s) 342
Bse1I ACTGG 2 cut(s) 226, 263
Bse3DI GCAATG 1 cut(s) 153
BseBI CCWGG 1 cut(s) 411
BseMI GCAATG 1 cut(s) 153
BseNI ACTGG 2 cut(s) 226, 263
BseXI GCAGC 4 cut(s) 79, 82, 110, 356
BsmAI GTCTC 1 cut(s) 342
BsmI GAATGC 1 cut(s) 94
Bso31I GGTCTC 1 cut(s) 342
Bsp1407I TGTACA 1 cut(s) 370
Bsp143I GATC 3 cut(s) 118, 289, 422
BspLI GGNNCC 1 cut(s) 408
BspMAI CTGCAG 1 cut(s) 100
BspPI GGATC 1 cut(s) 126
BspTNI GGTCTC 1 cut(s) 342
BsrDI GCAATG 1 cut(s) 153
BsrGI TGTACA 1 cut(s) 370
BsrI ACTGG 2 cut(s) 226, 263
BssMI GATC 3 cut(s) 118, 289, 422
Bst2UI CCWGG 1 cut(s) 411
BstAUI TGTACA 1 cut(s) 370
BstC8I GCNNGC 1 cut(s) 358
BstKTI GATC 3 cut(s) 121, 292, 425
BstMAI GTCTC 1 cut(s) 342
BstMBI GATC 3 cut(s) 118, 289, 422
BstMWI GCNNNNNNNGC 3 cut(s) 98, 164, 353
BstNI CCWGG 1 cut(s) 411
BstSCI CCNGG 1 cut(s) 409
BstSFI CTRYAG 1 cut(s) 96
BstV1I GCAGC 4 cut(s) 79, 82, 110, 356
BstX2I RGATCY 2 cut(s) 118, 422
BstYI RGATCY 2 cut(s) 118, 422
BtsIMutI CAGTG 1 cut(s) 219
Cac8I GCNNGC 1 cut(s) 358
Csp6I GTAC 1 cut(s) 371
CspCI CAANNNNNGTGG 2 cut(s) 21, 56
CviJI RGCY 7 cut(s) 45, 238, 246, 258, 283, 347, 414
CviKI_1 RGCY 7 cut(s) 45, 238, 246, 258, 283, 347, 414
CviQI GTAC 1 cut(s) 371
DpnI GATC 3 cut(s) 120, 291, 424
DpnII GATC 3 cut(s) 118, 289, 422
DrdI GACNNNNNNGTC 1 cut(s) 247
DseDI GACNNNNNNGTC 1 cut(s) 247
Eco31I GGTCTC 1 cut(s) 342
Eco57I CTGAAG 1 cut(s) 32
EcoRII CCWGG 1 cut(s) 409
FaiI YATR 6 cut(s) 12, 37, 315, 350, 428, 430
Fnu4HI GCNGC 4 cut(s) 93, 96, 99, 345
Fsp4HI GCNGC 4 cut(s) 93, 96, 99, 345
FspBI CTAG 1 cut(s) 402
GluI GCNGC 4 cut(s) 93, 96, 99, 345
HindIII AAGCTT 1 cut(s) 244
HphI GGTGA 1 cut(s) 200
Hpy188I TCNGA 2 cut(s) 84, 289
Hpy188III TCNNGA 3 cut(s) 50, 309, 395
HpyAV CCTTC 1 cut(s) 56
HpyCH4V TGCA 5 cut(s) 98, 296, 344, 360, 391
HpyF10VI GCNNNNNNNGC 3 cut(s) 98, 164, 353
Kzo9I GATC 3 cut(s) 118, 289, 422
Lsp1109I GCAGC 4 cut(s) 79, 82, 110, 356
LweI GCATC 1 cut(s) 400
MaeI CTAG 1 cut(s) 402
MaeIII GTNAC 1 cut(s) 193
MalI GATC 3 cut(s) 120, 291, 424
MboI GATC 3 cut(s) 118, 289, 422
MboII GAAGA 2 cut(s) 16, 97
MfeI CAATTG 1 cut(s) 321
MflI RGATCY 2 cut(s) 118, 422
MluCI AATT 7 cut(s) 15, 22, 138, 145, 172, 321, 374
MnlI CCTC 3 cut(s) 213, 272, 293
MspR9I CCNGG 1 cut(s) 411
MunI CAATTG 1 cut(s) 321
Mva1269I GAATGC 1 cut(s) 94
MvaI CCWGG 1 cut(s) 411
MwoI GCNNNNNNNGC 3 cut(s) 98, 164, 353
NdeII GATC 3 cut(s) 118, 289, 422
NlaIV GGNNCC 1 cut(s) 408
NmuCI GTSAC 1 cut(s) 193
PctI GAATGC 1 cut(s) 94
PkrI GCNGC 4 cut(s) 94, 97, 100, 346
Psp6I CCWGG 1 cut(s) 409
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 1 cut(s) 408
PstI CTGCAG 1 cut(s) 100
PsuI RGATCY 2 cut(s) 118, 422
RsaI GTAC 1 cut(s) 372
RsaNI GTAC 1 cut(s) 371
SatI GCNGC 4 cut(s) 93, 96, 99, 345
Sau3AI GATC 3 cut(s) 118, 289, 422
ScrFI CCNGG 1 cut(s) 411
SetI ASST 5 cut(s) 200, 248, 332, 349, 412
SfaNI GCATC 1 cut(s) 400
SfcI CTRYAG 1 cut(s) 96
Sse9I AATT 7 cut(s) 15, 22, 138, 145, 172, 321, 374
SspMI CTAG 1 cut(s) 402
StyD4I CCNGG 1 cut(s) 409
TaqI TCGA 1 cut(s) 277
TasI AATT 7 cut(s) 15, 22, 138, 145, 172, 321, 374
TatI WGTACW 1 cut(s) 370
TscAI CASTG 1 cut(s) 226
TseFI GTSAC 1 cut(s) 193
TseI GCWGC 4 cut(s) 92, 95, 98, 344
Tsp45I GTSAC 1 cut(s) 193
TspDTI ATGAA 2 cut(s) 17, 47
TspRI CASTG 1 cut(s) 226
XspI CTAG 1 cut(s) 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.