Prupe.2G208600_v2.0.a1

Lysine-specific histone demethylase 1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
24172328 .. 24176703
4376 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G208600.1

Sequence Viewer

Length: 2721 bp
ATGGATCCACCTAACGAATTCCCCGATGATTTTTCTTCGTTCCCTCCAATCCCGTTCGCCCTCTTTGTTCCCCCAGAAAACCCTAACCCCAATTCAAACGCAGCGCCAATTCCAAATACAGTCGAAAACCCTAGCTCAGCTCACCTTCTTTCCTTTTCGGTCCCCAAGAAACGAAGACGAGGCAGGCCTCATAGGGTTCCGACGTCGTTTCAGTTACCTCCAATTCCCAACGGCGTTTTCAACAGTAATAACAACGGTCTTGCTTCTTTTTCCAGTTCAATTTCAGCTCATTCCTCTAGAAACAATGTAGAAATCCCTGGTTCTTCGGCAAGAACCATGCCTGATATGTCCGACGAGATCATCGTGATCAATAAGGAGTCCACGGCGGAGGCGCTGATCGCGCTGTCGGCTGGTTTTCCTGCTGATTCGCTCACCGAGGAGGAAATTGATTTCGGGGTAATTCGAGTTATTGGGGGCATAGAGCAGGTCAATTACATTCTCATTAGGAACCACATAATTGCTAAATGGCGTGAAAATGTGTCGAATTGGGTCACAAAAGATATATTTATTGATTCTATACCTAAACATTGTCATTCCCTGTTGGATTCTACTTATAAATATCTGGTTTCGCATGGTTATATTAACTTTGGGGTTGCTCCGGCTATCAAAGAGAAGATTCCGGCTGAACCCAGTAAACCACATGTGATTGTGATTGGTGCTGGGCTTGCTGGTCTGGCTGCTGCCAGGCAAATGATGCGTTTTGGGTTTAAAGTGACTGTTTTGGAGGGTAGGAAGCGAGCGGGCGGGCGGGTTTATACTAAGAAAATGGAGGGAGGAATTAGGGTATGTGCAGCGGCGGATTTAGGGGGAAGTGTTTTGACTGGTACATTAGGGAACCCACTTGGCATTGTTGCACGCCAATTGGGTTATGTGCTTCATAAAGTGAGGGATAAGTGCCCACTTTATAGTTTTGATGGGAAGCCTGTAGATCCTGATATGGATATGAAGGTGGAAACTGCTTTTAACCAGCTTCTAGATAAGGCAAGTAGGCTTAGGCAGTTAATGGGAGGTGTTTCAGTTGATGTGTCTCTTGGTGCAGCATTGGAAACGTTCTGGCAGGTTTATGGGGATGCTGTGAATGCTGAGGAGATGAACATGTTTAATTGGCATCTTGCAAATTTGGAATATGCAAATGCAGGTTTAATATCAAATCTTTCACTTGCATTTTGGGACCAAGATGATCCATATGATATGGGAGGGGACCATTGCTTCTTGCCTGGAGGTAATGGAAGGTTGGTGCAGGCTTTGGCAGAGAATGTACCGATCTTATATGAGAAAATTGTGCACACCATTAGGTATGGTAGTGATGGAGTGCAGGTTATTGCTGGCAGCCAGGTTTTTGAGGGTGATATGGCATTGTGCACTGTTCCACTTGGGGTTTTGAAGAGTGGGTCCATCAAGTTTATTCCAGAGTTGCCTCAGAGAAAGCTTGATGGAATAAAGAGGTTGGGGTTCGGACTGTTGAATAAGGTTGCAATGCTTTTTCCTCATGTGTTCTGGGGCACAGATCTTGATACCTTTGGCCACCTTTCTGATGATTCAACCCGTCGAGGGGAGTTCTTCCTGTTTTACAGCTATGCAACAGTTGCTGGCGGTCCCCTTTTGATTGCTTTAGTAGCAGGTGAAGCTGCACATAAGTTTGAGAGCATGCCCCCTACGGATGCTGTGACCCGGGTTATTCAGATTCTCAAGGGTATATATGAACCACAAGGAATTAGTGTCCCAGAGCCCATCCAAACAGTCTGTACCAGATGGGGAAGCGACCCCTTCAGCCTAGGTTCTTACTCTAATGTGGCAGTAGGGGCGTCAGGAGATGATTATGATATTTTAGCAGAAAGTGTAGGAGATGGACGGCTTTTCTTTGCAGGTGAGGCTACCAATCGGAGATATCCTGCAACCATGCATGGCGCTTTTCTTAGTGGGTTCAGAGAAGCTGCTAATATGGCTCACTATGCCAACGCTCGTGCCCTGAGGATAAAAATTAACAGGAACCCATCAAAGAATGCCCATTCTTGTGCTTCCCTTCTTGCGGATTTATTTAGGGAGCCTGATTTAGAATTTGGGAGTTTTTCTGTTATCTTTTGTCGAAGGAATGCTGATCCTAAGTCGACAGCAATTTTAAGAGTGACATTTAATGAGCCTCGGAAGAAGAGTCATGACAGTGCAAAACCTGATCAACAGCATTCAAATAAGTTACTTTTTCAGCAGCTTCAGTCACATTTTAATCAGCAGCAGCAACTTCATGTTTACACTTTGTTATCTAGGCAGCAGGTTCTTGACCTCAGAGAGGTGCGAGGAGGTGATGAGATGAGGTTGAATTACCTCTGTGAAAAGCTGGGAGTGAAGCTGGTGGGGAGAAAAGGATTGGGGCCTACTGCTGATTCTGTAATTGCCTTAATAAAAGCTGAAAGGGGCATTCGTAAACCAGCTTCGACTTCATTGGCTTTAAAGTCTGGGACATCAAAGCTGAAAGCTGGCACTTTGAAACGAAAACTGGTCAGAAAGGCAAAAATAATGCGCCATGGCAATGGGTCTGCACCTTCTGCTAATTCAAACTCGGTGAATGATAAAGTGTCAGACGAAACTAAGATCACAAGTCAAGCACCCTCTAACACACTTGGTTCAGGGCAAAATCATTCCGACGTGTTGAAGAATGAGTAG

Protein Analysis

907

Amino Acids

98.85

Weight (kDa)

8.83

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 615
AarI CACCTGC 2 cut(s) 1670, 1916
AatII GACGTC 1 cut(s) 206
Acc36I ACCTGC 7 cut(s) 475, 1108, 1187, 1366, 1670, 1916, 2320
AccBSI CCGCTC 1 cut(s) 800
AccI GTMKAC 1 cut(s) 2168
AccII CGCG 1 cut(s) 401
AciI CCGC 8 cut(s) 386, 800, 804, 808, 854, 857, 1653, 2090
AclI AACGTT 1 cut(s) 1109
AclWI GGATC 4 cut(s) 12, 983, 1235, 2153
AcoI YGGCCR 1 cut(s) 1582
AcsI RAATTY 3 cut(s) 17, 1177, 2117
AcuI CTGAAG 2 cut(s) 1813, 2255
AcyI GRCGYC 2 cut(s) 203, 1865
AfaI GTAC 3 cut(s) 886, 1320, 1807
AfiI CCNNNNNNNGG 4 cut(s) 1611, 1612, 2089, 2347
AflIII ACRYGT 3 cut(s) 700, 1155, 2703
AjiI CACGTC 1 cut(s) 2704
AjnI CCWGG 4 cut(s) 316, 743, 1276, 1392
AjuI GAANNNNNNNTTGG 2 cut(s) 221, 253
Alw21I GWGCWC 2 cut(s) 1347, 1424
Alw26I GTCTC 1 cut(s) 1092
Alw44I GTGCAC 2 cut(s) 1343, 1420
AlwI GGATC 4 cut(s) 12, 983, 1235, 2153
AlwNI CAGNNNCTG 1 cut(s) 1649
Ama87I CYCGRG 1 cut(s) 1731
AoxI GGCC 3 cut(s) 185, 1582, 2429
ApaLI GTGCAC 2 cut(s) 1343, 1420
ApoI RAATTY 3 cut(s) 17, 1177, 2117
AspA2I CCTAGG 1 cut(s) 1834
AspLEI GCGC 5 cut(s) 106, 394, 403, 1970, 2580
AspS9I GGNCC 6 cut(s) 160, 1231, 1261, 1452, 1655, 2429
AsuC2I CCSGG 2 cut(s) 1732, 1733
AsuHPI GGTGA 7 cut(s) 134, 424, 1418, 1694, 1940, 2372, 2632
AvaI CYCGRG 1 cut(s) 1731
AvaII GGWCC 5 cut(s) 160, 1231, 1261, 1452, 1655
AvrII CCTAGG 1 cut(s) 1834
AxyI CCTNAGG 1 cut(s) 2030
BaeGI GKGCMC 5 cut(s) 959, 1347, 1424, 1565, 2029
BalI TGGCCA 1 cut(s) 1584
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 1791
BarI GAAGNNNNNNTAC 2 cut(s) 2473, 2505
BauI CACGAG 1 cut(s) 2022
BbsI GAAGAC 1 cut(s) 181
Bbv12I GWGCWC 2 cut(s) 1347, 1424
BbvCI CCTCAGC 1 cut(s) 1143
BccI CCATC 8 cut(s) 968, 1361, 1463, 1487, 1799, 1806, 1901, 2062
BceAI ACGGC 3 cut(s) 247, 399, 1928
BciT130I CCWGG 4 cut(s) 318, 745, 1278, 1394
BclI TGATCA 2 cut(s) 366, 2233
BcnI CCSGG 2 cut(s) 1732, 1733
BcoDI GTCTC 1 cut(s) 1092
BfaI CTAG 5 cut(s) 132, 297, 1034, 1835, 2322
BfmI CTRYAG 1 cut(s) 984
BfoI RGCGCY 3 cut(s) 107, 395, 1971
BfuAI ACCTGC 7 cut(s) 475, 1108, 1187, 1366, 1670, 1916, 2320
BglII AGATCT 1 cut(s) 1567
BlnI CCTAGG 1 cut(s) 1834
BlpI GCTNAGC 1 cut(s) 136
Bme1390I CCNGG 6 cut(s) 318, 745, 1278, 1394, 1732, 1733
Bme18I GGWCC 5 cut(s) 160, 1231, 1261, 1452, 1655
BmeT110I CYCGRG 1 cut(s) 1731
BmgBI CACGTC 1 cut(s) 2704
BmgT120I GGNCC 6 cut(s) 160, 1231, 1261, 1452, 1655, 2429
BmrFI CCNGG 6 cut(s) 318, 745, 1278, 1394, 1732, 1733
BmrI ACTGGG 1 cut(s) 684
BmsI GCATC 4 cut(s) 744, 1120, 1177, 1711
BmuI ACTGGG 1 cut(s) 684
BpiI GAAGAC 1 cut(s) 181
BpmI CTGGAG 1 cut(s) 1299
Bpu10I CCTNAGC 2 cut(s) 1052, 1143
Bpu1102I GCTNAGC 1 cut(s) 136
BpuEI CTTGAG 1 cut(s) 1733
BpuMI CCSGG 2 cut(s) 1732, 1733
BsaHI GRCGYC 2 cut(s) 203, 1865
BsaJI CCNNGG 7 cut(s) 316, 381, 435, 1731, 1834, 2201, 2581
BsaXI ACNNNNNCTCC 2 cut(s) 1362, 1392
Bsc4I CCNNNNNNNGG 4 cut(s) 1611, 1612, 2089, 2347
Bse1I ACTGG 4 cut(s) 273, 690, 886, 2559
Bse21I CCTNAGG 1 cut(s) 2030
Bse3DI GCAATG 3 cut(s) 1264, 1542, 2593
BseBI CCWGG 4 cut(s) 318, 745, 1278, 1394
BseDI CCNNGG 7 cut(s) 316, 381, 435, 1731, 1834, 2201, 2581
BseGI GGATG 3 cut(s) 1135, 1726, 1791
BseLI CCNNNNNNNGG 4 cut(s) 1611, 1612, 2089, 2347
BseMI GCAATG 3 cut(s) 1264, 1542, 2593
BseMII CTCAG 5 cut(s) 150, 1134, 1493, 2021, 2356
BseNI ACTGG 4 cut(s) 273, 690, 886, 2559
BseRI GAGGAG 3 cut(s) 452, 1160, 2370
BseSI GKGCMC 5 cut(s) 959, 1347, 1424, 1565, 2029
BseYI CCCAGC 2 cut(s) 719, 2395
BsgI GTGCAG 6 cut(s) 870, 1116, 1319, 1394, 1674, 2580
Bsh1236I CGCG 1 cut(s) 401
BshFI GGCC 3 cut(s) 187, 1584, 2431
BsiHKAI GWGCWC 2 cut(s) 1347, 1424
BsiHKCI CYCGRG 1 cut(s) 1731
BsiSI CCGG 3 cut(s) 659, 680, 1732
BslFI GGGAC 6 cut(s) 146, 1244, 1274, 1641, 1766, 2530
BslI CCNNNNNNNGG 4 cut(s) 1611, 1612, 2089, 2347
BsmAI GTCTC 1 cut(s) 1092
BsmFI GGGAC 6 cut(s) 146, 1244, 1274, 1641, 1766, 2530
BsmI GAATGC 5 cut(s) 1144, 2068, 2158, 2242, 2475
BsnI GGCC 3 cut(s) 187, 1584, 2431
BsoBI CYCGRG 1 cut(s) 1731
Bsp1286I GDGCHC 6 cut(s) 959, 1347, 1424, 1565, 1791, 2029
Bsp1720I GCTNAGC 1 cut(s) 136
Bsp19I CCATGG 1 cut(s) 2581
BspACI CCGC 8 cut(s) 386, 800, 804, 808, 854, 857, 1653, 2090
BspANI GGCC 3 cut(s) 187, 1584, 2431
BspCNI CTCAG 5 cut(s) 149, 1135, 1492, 2022, 2355
BspFNI CGCG 1 cut(s) 401
BspHI TCATGA 1 cut(s) 2215
BspMI ACCTGC 7 cut(s) 475, 1108, 1187, 1366, 1670, 1916, 2320
BspPI GGATC 4 cut(s) 12, 983, 1235, 2153
BsrBI CCGCTC 1 cut(s) 800
BsrDI GCAATG 3 cut(s) 1264, 1542, 2593
BsrI ACTGG 4 cut(s) 273, 690, 886, 2559
BssECI CCNNGG 7 cut(s) 316, 381, 435, 1731, 1834, 2201, 2581
BssNI GRCGYC 2 cut(s) 203, 1865
BssSI CACGAG 1 cut(s) 2022
BssT1I CCWWGG 2 cut(s) 1834, 2581
Bst2BI CACGAG 1 cut(s) 2022
Bst2UI CCWGG 4 cut(s) 318, 745, 1278, 1394
Bst4CI ACNGT 9 cut(s) 121, 245, 257, 778, 1426, 1521, 1645, 1801, 2222
Bst6I CTCTTC 2 cut(s) 1439, 2204
BstACI GRCGYC 2 cut(s) 203, 1865
BstAPI GCANNNNNTGC 3 cut(s) 754, 1646, 2603
BstDSI CCRYGG 2 cut(s) 381, 2581
BstENI CCTNNNNNAGG 1 cut(s) 2345
BstF5I GGATG 3 cut(s) 1135, 1726, 1791
BstFNI CGCG 1 cut(s) 401
BstH2I RGCGCY 3 cut(s) 107, 395, 1971
BstHHI GCGC 5 cut(s) 106, 394, 403, 1970, 2580
BstMAI GTCTC 1 cut(s) 1092
BstNI CCWGG 4 cut(s) 318, 745, 1278, 1394
BstNSI RCATGY 3 cut(s) 704, 1159, 1711
BstSCI CCNGG 6 cut(s) 316, 743, 1276, 1392, 1730, 1731
BstSFI CTRYAG 1 cut(s) 984
BstSLI GKGCMC 5 cut(s) 959, 1347, 1424, 1565, 2029
BstUI CGCG 1 cut(s) 401
BstV2I GAAGAC 1 cut(s) 181
BstX2I RGATCY 3 cut(s) 4, 988, 1567
BstXI CCANNNNNNTGG 1 cut(s) 2588
BstYI RGATCY 3 cut(s) 4, 988, 1567
Bsu36I CCTNAGG 1 cut(s) 2030
BsuRI GGCC 3 cut(s) 187, 1584, 2431
BtgI CCRYGG 2 cut(s) 381, 2581
BtrI CACGTC 1 cut(s) 2704
BtsCI GGATG 3 cut(s) 1135, 1726, 1791
BtsIMutI CAGTG 2 cut(s) 1422, 2227
BveI ACCTGC 7 cut(s) 475, 1108, 1187, 1366, 1670, 1916, 2320
CaiI CAGNNNCTG 1 cut(s) 1649
CciI TCATGA 1 cut(s) 2215
CfoI GCGC 5 cut(s) 106, 394, 403, 1970, 2580
Cfr13I GGNCC 6 cut(s) 160, 1231, 1261, 1452, 1655, 2429
Cfr9I CCCGGG 1 cut(s) 1731
CseI GACGC 1 cut(s) 1854
Csp6I GTAC 3 cut(s) 885, 1319, 1806
CviQI GTAC 3 cut(s) 885, 1319, 1806
DraI TTTAAA 2 cut(s) 769, 2508
EaeI YGGCCR 1 cut(s) 1582
Eam1104I CTCTTC 2 cut(s) 1439, 2204
EarI CTCTTC 2 cut(s) 1439, 2204
EciI GGCGGA 2 cut(s) 401, 872
Eco130I CCWWGG 2 cut(s) 1834, 2581
Eco147I AGGCCT 1 cut(s) 187
Eco24I GRGCYC 1 cut(s) 1791
Eco32I GATATC 1 cut(s) 1949
Eco47I GGWCC 5 cut(s) 160, 1231, 1261, 1452, 1655
Eco57I CTGAAG 2 cut(s) 1813, 2255
Eco81I CCTNAGG 1 cut(s) 2030
Eco88I CYCGRG 1 cut(s) 1731
EcoNI CCTNNNNNAGG 1 cut(s) 2345
EcoO109I RGGNCCY 1 cut(s) 2429
EcoRI GAATTC 1 cut(s) 17
EcoRII CCWGG 4 cut(s) 316, 743, 1276, 1392
EcoRV GATATC 1 cut(s) 1949
EcoT14I CCWWGG 2 cut(s) 1834, 2581
EcoT22I ATGCAT 1 cut(s) 1965
EcoT38I GRGCYC 1 cut(s) 1791
ErhI CCWWGG 2 cut(s) 1834, 2581
FaqI GGGAC 6 cut(s) 146, 1244, 1274, 1641, 1766, 2530
FauI CCCGC 3 cut(s) 793, 797, 801
FauNDI CATATG 1 cut(s) 1246
FbaI TGATCA 2 cut(s) 366, 2233
FblI GTMKAC 1 cut(s) 2168
FokI GGATG 3 cut(s) 1142, 1733, 1778
FriOI GRGCYC 1 cut(s) 1791
FspBI CTAG 5 cut(s) 132, 297, 1034, 1835, 2322
GlaI GCGC 5 cut(s) 105, 393, 402, 1969, 2579
GsaI CCCAGC 2 cut(s) 723, 2399
GsuI CTGGAG 1 cut(s) 1299
HaeII RGCGCY 3 cut(s) 107, 395, 1971
HaeIII GGCC 3 cut(s) 187, 1584, 2431
HapII CCGG 3 cut(s) 659, 680, 1732
HgaI GACGC 1 cut(s) 1854
HhaI GCGC 5 cut(s) 106, 394, 403, 1970, 2580
Hin1I GRCGYC 2 cut(s) 203, 1865
Hin6I GCGC 5 cut(s) 104, 392, 401, 1968, 2578
HinP1I GCGC 5 cut(s) 104, 392, 401, 1968, 2578
HincII GTYRAC 1 cut(s) 2169
HindII GTYRAC 1 cut(s) 2169
HindIII AAGCTT 1 cut(s) 1487
HinfI GANTC 9 cut(s) 377, 425, 572, 605, 676, 1598, 1744, 2212, 2441
HpaII CCGG 3 cut(s) 659, 680, 1732
HphI GGTGA 7 cut(s) 134, 424, 1418, 1694, 1940, 2372, 2632
Hpy166II GTNNAC 7 cut(s) 381, 695, 1345, 1422, 2169, 2308, 2483
Hpy188III TCNNGA 9 cut(s) 297, 364, 992, 1034, 1469, 1571, 1869, 2216, 2336
Hpy8I GTNNAC 7 cut(s) 381, 695, 1345, 1422, 2169, 2308, 2483
Hpy99I CGWCG 5 cut(s) 205, 208, 356, 1611, 2705
HpyAV CCTTC 7 cut(s) 155, 1000, 1284, 1837, 2093, 2142, 2610
HpyCH4III ACNGT 9 cut(s) 121, 245, 257, 778, 1426, 1521, 1645, 1801, 2222
HpyCH4IV ACGT 3 cut(s) 203, 1109, 2703
HpySE526I ACGT 3 cut(s) 203, 1109, 2703
Hsp92I GRCGYC 2 cut(s) 203, 1865
HspAI GCGC 5 cut(s) 104, 392, 401, 1968, 2578
Ksp22I TGATCA 2 cut(s) 366, 2233
LmnI GCTCC 2 cut(s) 661, 2104
LweI GCATC 4 cut(s) 744, 1120, 1177, 1711
MaeI CTAG 5 cut(s) 132, 297, 1034, 1835, 2322
MaeII ACGT 3 cut(s) 203, 1109, 2703
MaeIII GTNAC 7 cut(s) 213, 550, 772, 1726, 2185, 2253, 2274
MbiI CCGCTC 1 cut(s) 800
MboII GAAGA 8 cut(s) 27, 186, 315, 685, 1456, 1612, 2218, 2221
MfeI CAATTG 1 cut(s) 920
MflI RGATCY 3 cut(s) 4, 988, 1567
MhlI GDGCHC 6 cut(s) 959, 1347, 1424, 1565, 1791, 2029
MlsI TGGCCA 1 cut(s) 1584
MluNI TGGCCA 1 cut(s) 1584
MlyI GAGTC 2 cut(s) 386, 2221
MmeI TCCRAC 3 cut(s) 224, 375, 582
Mox20I TGGCCA 1 cut(s) 1584
Mph1103I ATGCAT 1 cut(s) 1965
MscI TGGCCA 1 cut(s) 1584
MslI CAYNNNNRTG 3 cut(s) 2073, 2220, 2586
Msp20I TGGCCA 1 cut(s) 1584
MspA1I CMGCKG 1 cut(s) 854
MspI CCGG 3 cut(s) 659, 680, 1732
MspR9I CCNGG 6 cut(s) 318, 745, 1278, 1394, 1732, 1733
MunI CAATTG 1 cut(s) 920
Mva1269I GAATGC 5 cut(s) 1144, 2068, 2158, 2242, 2475
MvaI CCWGG 4 cut(s) 318, 745, 1278, 1394
MvnI CGCG 1 cut(s) 401
NciI CCSGG 2 cut(s) 1732, 1733
NcoI CCATGG 1 cut(s) 2581
NdeI CATATG 1 cut(s) 1246
NmuCI GTSAC 5 cut(s) 550, 772, 1726, 2185, 2274
NsiI ATGCAT 1 cut(s) 1965
NspI RCATGY 3 cut(s) 704, 1159, 1711
PaeI GCATGC 1 cut(s) 1711
PagI TCATGA 1 cut(s) 2215
PaqCI CACCTGC 2 cut(s) 1670, 1916
PceI AGGCCT 1 cut(s) 187
PciI ACATGT 2 cut(s) 700, 1155
PcsI WCGNNNNNNNCGW 2 cut(s) 21, 360
PctI GAATGC 5 cut(s) 1144, 2068, 2158, 2242, 2475
PfeI GAWTC 7 cut(s) 425, 572, 605, 676, 1598, 1744, 2441
PleI GAGTC 2 cut(s) 385, 2220
PpsI GAGTC 2 cut(s) 385, 2220
PscI ACATGT 2 cut(s) 700, 1155
PsiI TTATAA 1 cut(s) 615
Psp1406I AACGTT 1 cut(s) 1109
Psp6I CCWGG 4 cut(s) 316, 743, 1276, 1392
PspFI CCCAGC 2 cut(s) 719, 2395
PspGI CCWGG 4 cut(s) 316, 743, 1276, 1392
PspPI GGNCC 6 cut(s) 160, 1231, 1261, 1452, 1655, 2429
PstNI CAGNNNCTG 1 cut(s) 1649
PsuI RGATCY 3 cut(s) 4, 988, 1567
RsaI GTAC 3 cut(s) 886, 1320, 1807
RsaNI GTAC 3 cut(s) 885, 1319, 1806
RseI CAYNNNNRTG 3 cut(s) 2073, 2220, 2586
SalI GTCGAC 1 cut(s) 2167
Sau96I GGNCC 6 cut(s) 160, 1231, 1261, 1452, 1655, 2429
SchI GAGTC 2 cut(s) 386, 2221
ScrFI CCNGG 6 cut(s) 318, 745, 1278, 1394, 1732, 1733
SduI GDGCHC 6 cut(s) 959, 1347, 1424, 1565, 1791, 2029
SfaNI GCATC 4 cut(s) 744, 1120, 1177, 1711
SfcI CTRYAG 1 cut(s) 984
SinI GGWCC 5 cut(s) 160, 1231, 1261, 1452, 1655
SmaI CCCGGG 1 cut(s) 1733
SmiMI CAYNNNNRTG 3 cut(s) 2073, 2220, 2586
SmlI CTYRAG 1 cut(s) 1748
SmoI CTYRAG 1 cut(s) 1748
SphI GCATGC 1 cut(s) 1711
SseBI AGGCCT 1 cut(s) 187
SsiI CCGC 8 cut(s) 386, 800, 804, 808, 854, 857, 1653, 2090
SspMI CTAG 5 cut(s) 132, 297, 1034, 1835, 2322
StuI AGGCCT 1 cut(s) 187
StyD4I CCNGG 6 cut(s) 316, 743, 1276, 1392, 1730, 1731
StyI CCWWGG 2 cut(s) 1834, 2581
TaaI ACNGT 9 cut(s) 121, 245, 257, 778, 1426, 1521, 1645, 1801, 2222
TaiI ACGT 3 cut(s) 206, 1112, 2706
TaqI TCGA 7 cut(s) 123, 463, 542, 1609, 2146, 2168, 2492
TaqII GACCGA 1 cut(s) 148
TauI GCSGC 1 cut(s) 857
TfiI GAWTC 7 cut(s) 425, 572, 605, 676, 1598, 1744, 2441
TscAI CASTG 2 cut(s) 1429, 2227
TseFI GTSAC 5 cut(s) 550, 772, 1726, 2185, 2274
Tsp45I GTSAC 5 cut(s) 550, 772, 1726, 2185, 2274
TspDTI ATGAA 6 cut(s) 926, 1019, 1166, 1776, 2291, 2487
TspGWI ACGGA 1 cut(s) 1733
TspMI CCCGGG 1 cut(s) 1731
TspRI CASTG 2 cut(s) 1429, 2227
VneI GTGCAC 2 cut(s) 1343, 1420
VpaK11BI GGWCC 5 cut(s) 160, 1231, 1261, 1452, 1655
XagI CCTNNNNNAGG 1 cut(s) 2345
XapI RAATTY 3 cut(s) 17, 1177, 2117
XbaI TCTAGA 2 cut(s) 296, 1033
XceI RCATGY 3 cut(s) 704, 1159, 1711
XmaI CCCGGG 1 cut(s) 1731
XmaJI CCTAGG 1 cut(s) 1834
XmiI GTMKAC 1 cut(s) 2168
XspI CTAG 5 cut(s) 132, 297, 1034, 1835, 2322
ZraI GACGTC 1 cut(s) 204
Zsp2I ATGCAT 1 cut(s) 1965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.