Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0005668

Physical Location & Seq

Genomic Coordinates Forward (+)

14172407 .. 14180083

Gene Structure 7677 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00293970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGATGCGTTTCGGGTTTAAAGTGACTGTTTTGGAGGGTAGGAAGCGTGCAGGTGGGCGGGTGTATACTAAGAAAATGGAGGGAGGAATTAGGGTATGTCAAGCAGCGGCAGATTTAGGTGGTAGTGTTTTGACTGGTACATTAGGGAACCCACTTGGCATTGTTGCTCGACAATTGGGCTACTCGCTTCATAAGATTAGAGACAAGTGCCCACTTTATAATGTGGAGGGGAAACCGGTAGATCATGATATGGATATGAAGGTGGAAAGTGTTTTTAACCATCTTTTAGATAAGGCAAGTAGGCTTAGGCAGTTAATGGGTGGGGTTTCGGTTGATGTGTCTCTTGGTTCGGCATTGGAAACATTCTGGCATGTTTCTGGGAATGCTGTGAATGCTGAGGAGATGAACTTGTTCAATTGGCATCTTGCGAATTTGGAATACGCAAATGCAGGTTTACTGTCGAAACTTTCGCTTGCATTTTGGGACCAAGATGATCCATATGATATGGGAGGGGACCATTGCTTCTTACCTGGTGGTAATGGAAGGCTGGTGCAGGCTTTGGCAGAGAATGTGCCGATCCTATATGAGAAAACTGTTCACACCATAAGGTATGGTAGTGACGGGGTACAGATTCTTGCTGGAAGCCAGGTTTTTGAGGGAGATATGGTTTTGTGCACTGTTCCGCTTGGTGTTTTGAAGAGTGGGTCCATCAAGTTTATTCCTGAGTTGCCTCAGCGAAAGCTTGATGGAATTAAGAGGTTGGGGTTTGGTTTGTTGAATAAGGTTGCAATGCTTTTTCCTCATGTGTTTTGGGGCACAGATCTTGATACATTCGGCCATCTGTCTGATGATTCAAGCCGTCGAGGGGAATTCTTCCTGTTTTACAGCTATGCAACAGTTGCTGGTGGTCCTCTCTTGCTTGCTTTAGTAGCAGGTGAAGCTGCACATAAGTTTGAGAGCATGCCCCCTACGGATGCTGTGACCCGGGTTCTTCAGATTCTTAAGGGTATTTATGAACCACAAGGAATTAGTGTCCCAGAGCCCATCCAAACGGTCTGTACCAGATGGGGAAGTGACCCCTTCAGCCTCGGTTCTTACTCTAATGTTGCAGTTGGGGCATCAGGAGATGATTATGATATCTTAGCAGAAAGTGTTGGGGATGGACGACTTTTCTTTGCCGGTGAGGCTACCAATAGGAGATATCCTGCAACTATGCACGGAGCTTTCCTTAGTGGGCTCAGAGAAGCTGCAAATATGGCCAACTATGCTAATGCTCGAGCTCTAAGGATAAAGCTTAACAGGAACCCATCAAAGAATGCCCATTCTTGTGCTTCCCTTCTTGCAGATTTATTCAGAGAGCCTGATTTAGAATTTGGGAGTTTTTCTGTTATTTTTGGTCGAAGAAATGCTGATCCCAAGTCGACAGCAATTTTAAGGGTGACATTTAATGACCCTCGGAAGAAGAGTCATGACGGTTCAAGACCTGATCAACAGCACTCAAATAAGTTACTTTTTCAGCAGCTTCAGTCACATTTTAATCAGCAGCAGCAGCTTCATGTTTACACTTTGTTATCTAGGCAGCAGGCTCTTGAGCTCCGAGAAGTACGAGGTGGTGATGAGATGTGGTTGAATTACCTCTGTGAAAAGCTTGGAGTGAAGCTTGTGGGGAGAAAGGGTTTGGGGCCTTCAGCTGATTCTGTAATTGCCTTAATAAAAGCTGAGAGGGGCAATCGTAAACCTGCTTCAACTTTATCATCTTTGAAGTCTGGTACATCGAAGCTGAAACCTGGCACTTTGAAACGAAAATTGGTCAGAAGGGCTAAAATAATGCGCAACATTAATGTGTCTCCCCTTTCTGCTAATTCAAACTTGGCTATTGGTAAACTCCCAGAGGAAAATAAGAACAGTGTTCAAGTAGTCTCCAACACACTCGGTTCAGGCCAAAACGATTCTGAGGTGTTGAAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009987 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0035601 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0071704 GO:0071840 GO:0098732 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

656

Amino Acids

71.82

Weight (kDa)

9.27

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amino_oxidase	PF01593	2 - 419	4e-78	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10390 AT3G10390 AT3G10390 AT3G10390
fragaria_vesca	FvH4_7g18750 FvH4_7g18750 FvH4_7g18750 FvH4_7g18750
malus_domestica	MD01G1103000.v1.1
prunus_persica	Prupe.2G208600_v2.0.a1 Prupe.2G208600_v2.0.a1
pyrus_communis	pycom01g12950 pycom07g16350
rosa_chinensis	RchiOBHm_Chr1g0362561
rosa_laevigata	RLG00000027639
rosa_multiflora	Rmu_sc0005725.1_g000006
rosa_roxburghii	Rroxscaffold_4G00293970
rosa_rugosa	Rorug01G0299000 Rorug01G0299100 Rorug01G0299200 Rorug01G0299300 Rorug01G0299300 Rorug01G0299400
rosa_samantha	Rh1AG308200 Rh1BG271200 Rh1CG289100 Rh1DG301600
rosa_wichuraiana	Rw1G027350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	219
AarI	CACCTGC	2 cut(s)	41, 923
Acc16I	TGCGCA	1 cut(s)	1832
Acc36I	ACCTGC	4 cut(s)	41, 440, 923, 1747
AccI	GTMKAC	2 cut(s)	65, 1421
AciI	CCGC	3 cut(s)	58, 107, 683
AclWI	GGATC	3 cut(s)	488, 571, 1406
AcoI	YGGCCR	2 cut(s)	835, 1257
AcsI	RAATTY	3 cut(s)	430, 869, 1370
AcuI	CTGAAG	4 cut(s)	977, 1066, 1508, 1671
AfaI	GTAC	5 cut(s)	139, 627, 1060, 1605, 1771
AfiI	CCNNNNNNNGG	1 cut(s)	865
AflII	CTTAAG	1 cut(s)	1001
AgeI	ACCGGT	1 cut(s)	235
AjnI	CCWGG	3 cut(s)	529, 645, 1786
AjuI	GAANNNNNNNTTGG	2 cut(s)	1790, 1822
Alw21I	GWGCWC	3 cut(s)	677, 1282, 1596
Alw26I	GTCTC	4 cut(s)	195, 345, 1851, 1924
Alw44I	GTGCAC	1 cut(s)	673
AlwI	GGATC	3 cut(s)	488, 571, 1406
AlwNI	CAGNNNCTG	1 cut(s)	902
Ama87I	CYCGRG	2 cut(s)	984, 1275
AoxI	GGCC	4 cut(s)	835, 1257, 1682, 1939
ApaLI	GTGCAC	1 cut(s)	673
ApeKI	GCWGC	8 cut(s)	104, 941, 1247, 1519, 1543, 1546, 1549, 1579
ApoI	RAATTY	3 cut(s)	430, 869, 1370
AseI	ATTAAT	1 cut(s)	1839
AsiGI	ACCGGT	1 cut(s)	235
Asp700I	GAANNNNTTC	1 cut(s)	410
AspLEI	GCGC	1 cut(s)	1833
AspS9I	GGNCC	5 cut(s)	484, 514, 705, 908, 1682
AsuC2I	CCSGG	2 cut(s)	985, 986
AsuHPI	GGTGA	4 cut(s)	947, 1193, 1450, 1625
AvaI	CYCGRG	2 cut(s)	984, 1275
AvaII	GGWCC	4 cut(s)	484, 514, 705, 908
BaeGI	GKGCMC	3 cut(s)	212, 677, 818
BalI	TGGCCA	1 cut(s)	1259
BanII	GRGCYC	4 cut(s)	1044, 1239, 1282, 1596
BarI	GAAGNNNNNNTAC	2 cut(s)	1726, 1758
Bbv12I	GWGCWC	3 cut(s)	677, 1282, 1596
BbvCI	CCTCAGC	2 cut(s)	396, 732
BbvI	GCAGC	8 cut(s)	116, 928, 1234, 1531, 1555, 1558, 1561, 1591
BccI	CCATC	8 cut(s)	288, 716, 740, 846, 1052, 1059, 1154, 1315
BceAI	ACGGC	1 cut(s)	843
BciT130I	CCWGG	3 cut(s)	531, 647, 1788
BclI	TGATCA	1 cut(s)	1486
BcnI	CCSGG	2 cut(s)	985, 986
BcoDI	GTCTC	4 cut(s)	195, 345, 1851, 1924
BfaI	CTAG	1 cut(s)	1575
BfrI	CTTAAG	1 cut(s)	1001
BfuAI	ACCTGC	4 cut(s)	41, 440, 923, 1747
BglI	GCCNNNNNGGC	1 cut(s)	1184
BglII	AGATCT	1 cut(s)	820
BisI	GCNGC	9 cut(s)	105, 108, 942, 1248, 1520, 1544, 1547, 1550, 1580
BlsI	GCNGC	9 cut(s)	106, 109, 943, 1249, 1521, 1545, 1548, 1551, 1581
Bme1390I	CCNGG	5 cut(s)	531, 647, 985, 986, 1788
Bme18I	GGWCC	4 cut(s)	484, 514, 705, 908
BmeT110I	CYCGRG	2 cut(s)	984, 1275
BmgT120I	GGNCC	5 cut(s)	484, 514, 705, 908, 1682
BmiI	GGNNCC	6 cut(s)	149, 485, 515, 706, 1304, 1683
BmrFI	CCNGG	5 cut(s)	531, 647, 985, 986, 1788
BmsI	GCATC	3 cut(s)	430, 964, 1127
Bpu10I	CCTNAGC	3 cut(s)	305, 396, 732
BpuEI	CTTGAG	1 cut(s)	1610
BpuMI	CCSGG	2 cut(s)	985, 986
BsaJI	CCNNGG	3 cut(s)	984, 1087, 1454
BsaWI	WCCGGW	1 cut(s)	235
BsaXI	ACNNNNNCTCC	4 cut(s)	651, 681, 1660, 1690
Bsc4I	CCNNNNNNNGG	1 cut(s)	865
Bse118I	RCCGGY	2 cut(s)	235, 1178
Bse1I	ACTGG	1 cut(s)	139
Bse3DI	GCAATG	2 cut(s)	517, 795
BseBI	CCWGG	3 cut(s)	531, 647, 1788
BseDI	CCNNGG	3 cut(s)	984, 1087, 1454
BseGI	GGATG	3 cut(s)	979, 1044, 1165
BseLI	CCNNNNNNNGG	1 cut(s)	865
BseMI	GCAATG	2 cut(s)	517, 795
BseMII	CTCAG	6 cut(s)	387, 714, 746, 1252, 1710, 1944
BseNI	ACTGG	1 cut(s)	139
BseRI	GAGGAG	1 cut(s)	413
BseSI	GKGCMC	3 cut(s)	212, 677, 818
BseXI	GCAGC	8 cut(s)	116, 928, 1234, 1531, 1555, 1558, 1561, 1591
BsgI	GTGCAG	3 cut(s)	69, 572, 927
BshFI	GGCC	4 cut(s)	837, 1259, 1684, 1941
BshTI	ACCGGT	1 cut(s)	235
BsiHKAI	GWGCWC	3 cut(s)	677, 1282, 1596
BsiHKCI	CYCGRG	2 cut(s)	984, 1275
BsiSI	CCGG	3 cut(s)	236, 985, 1179
BslFI	GGGAC	3 cut(s)	497, 527, 1019
BslI	CCNNNNNNNGG	1 cut(s)	865
BsmAI	GTCTC	4 cut(s)	195, 345, 1851, 1924
BsmFI	GGGAC	3 cut(s)	497, 527, 1019
BsmI	GAATGC	3 cut(s)	388, 397, 1321
BsnI	GGCC	4 cut(s)	837, 1259, 1684, 1941
BsoBI	CYCGRG	2 cut(s)	984, 1275
Bsp1286I	GDGCHC	7 cut(s)	212, 677, 818, 1044, 1239, 1282, 1596
Bsp143I	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
BspACI	CCGC	3 cut(s)	58, 107, 683
BspANI	GGCC	4 cut(s)	837, 1259, 1684, 1941
BspCNI	CTCAG	6 cut(s)	388, 715, 745, 1251, 1711, 1945
BspHI	TCATGA	2 cut(s)	244, 1468
BspLI	GGNNCC	6 cut(s)	149, 485, 515, 706, 1304, 1683
BspMI	ACCTGC	4 cut(s)	41, 440, 923, 1747
BspPI	GGATC	3 cut(s)	488, 571, 1406
BspTI	CTTAAG	1 cut(s)	1001
BsrDI	GCAATG	2 cut(s)	517, 795
BsrFI	RCCGGY	2 cut(s)	235, 1178
BsrI	ACTGG	1 cut(s)	139
BssAI	RCCGGY	2 cut(s)	235, 1178
BssECI	CCNNGG	3 cut(s)	984, 1087, 1454
BssMI	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
BssNAI	GTATAC	1 cut(s)	66
Bst1107I	GTATAC	1 cut(s)	66
Bst2UI	CCWGG	3 cut(s)	531, 647, 1788
Bst4CI	ACNGT	8 cut(s)	28, 459, 595, 679, 898, 1054, 1475, 1907
Bst6I	CTCTTC	2 cut(s)	692, 1457
BstAFI	CTTAAG	1 cut(s)	1001
BstAPI	GCANNNNNTGC	1 cut(s)	899
BstC8I	GCNNGC	6 cut(s)	48, 474, 555, 921, 962, 1584
BstF5I	GGATG	3 cut(s)	979, 1044, 1165
BstHHI	GCGC	1 cut(s)	1833
BstKTI	GATC	6 cut(s)	244, 496, 579, 823, 1414, 1489
BstMAI	GTCTC	4 cut(s)	195, 345, 1851, 1924
BstMBI	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
BstMWI	GCNNNNNNNGC	9 cut(s)	392, 899, 929, 938, 1115, 1184, 1256, 1265, 1549
BstNI	CCWGG	3 cut(s)	531, 647, 1788
BstNSI	RCATGY	2 cut(s)	374, 964
BstSCI	CCNGG	5 cut(s)	529, 645, 983, 984, 1786
BstSLI	GKGCMC	3 cut(s)	212, 677, 818
BstV1I	GCAGC	8 cut(s)	116, 928, 1234, 1531, 1555, 1558, 1561, 1591
BstX2I	RGATCY	1 cut(s)	820
BstYI	RGATCY	1 cut(s)	820
BstZ17I	GTATAC	1 cut(s)	66
BsuRI	GGCC	4 cut(s)	837, 1259, 1684, 1941
BtsCI	GGATG	3 cut(s)	979, 1044, 1165
BtsIMutI	CAGTG	2 cut(s)	675, 1912
BveI	ACCTGC	4 cut(s)	41, 440, 923, 1747
Cac8I	GCNNGC	6 cut(s)	48, 474, 555, 921, 962, 1584
CaiI	CAGNNNCTG	1 cut(s)	902
CciI	TCATGA	2 cut(s)	244, 1468
CfoI	GCGC	1 cut(s)	1833
Cfr10I	RCCGGY	2 cut(s)	235, 1178
Cfr13I	GGNCC	5 cut(s)	484, 514, 705, 908, 1682
Cfr9I	CCCGGG	1 cut(s)	984
CsiI	ACCWGGT	1 cut(s)	529
Csp6I	GTAC	5 cut(s)	138, 626, 1059, 1604, 1770
CspAI	ACCGGT	1 cut(s)	235
CviAII	CATG	6 cut(s)	245, 371, 803, 961, 1469, 1556
CviQI	GTAC	5 cut(s)	138, 626, 1059, 1604, 1770
DpnI	GATC	6 cut(s)	243, 495, 578, 822, 1413, 1488
DpnII	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
DraI	TTTAAA	1 cut(s)	19
EaeI	YGGCCR	2 cut(s)	835, 1257
Eam1104I	CTCTTC	2 cut(s)	692, 1457
EarI	CTCTTC	2 cut(s)	692, 1457
Ecl136II	GAGCTC	2 cut(s)	1280, 1594
Eco24I	GRGCYC	4 cut(s)	1044, 1239, 1282, 1596
Eco32I	GATATC	2 cut(s)	1138, 1202
Eco47I	GGWCC	4 cut(s)	484, 514, 705, 908
Eco53kI	GAGCTC	2 cut(s)	1280, 1594
Eco57I	CTGAAG	4 cut(s)	977, 1066, 1508, 1671
Eco88I	CYCGRG	2 cut(s)	984, 1275
EcoICRI	GAGCTC	2 cut(s)	1280, 1594
EcoO109I	RGGNCCY	1 cut(s)	1682
EcoRI	GAATTC	1 cut(s)	869
EcoRII	CCWGG	3 cut(s)	529, 645, 1786
EcoRV	GATATC	2 cut(s)	1138, 1202
EcoT38I	GRGCYC	4 cut(s)	1044, 1239, 1282, 1596
FaeI	CATG	6 cut(s)	248, 374, 806, 964, 1472, 1559
FaqI	GGGAC	3 cut(s)	497, 527, 1019
FatI	CATG	6 cut(s)	244, 370, 802, 960, 1468, 1555
FauI	CCCGC	1 cut(s)	51
FauNDI	CATATG	1 cut(s)	499
FbaI	TGATCA	1 cut(s)	1486
FblI	GTMKAC	2 cut(s)	65, 1421
Fnu4HI	GCNGC	9 cut(s)	105, 108, 942, 1248, 1520, 1544, 1547, 1550, 1580
FokI	GGATG	3 cut(s)	986, 1031, 1172
FriOI	GRGCYC	4 cut(s)	1044, 1239, 1282, 1596
Fsp4HI	GCNGC	9 cut(s)	105, 108, 942, 1248, 1520, 1544, 1547, 1550, 1580
FspBI	CTAG	1 cut(s)	1575
FspI	TGCGCA	1 cut(s)	1832
GlaI	GCGC	1 cut(s)	1832
GluI	GCNGC	9 cut(s)	105, 108, 942, 1248, 1520, 1544, 1547, 1550, 1580
HaeIII	GGCC	4 cut(s)	837, 1259, 1684, 1941
HapII	CCGG	3 cut(s)	236, 985, 1179
HhaI	GCGC	1 cut(s)	1833
Hin1II	CATG	6 cut(s)	248, 374, 806, 964, 1472, 1559
Hin6I	GCGC	1 cut(s)	1831
HinP1I	GCGC	1 cut(s)	1831
HincII	GTYRAC	1 cut(s)	1422
HindII	GTYRAC	1 cut(s)	1422
HindIII	AAGCTT	4 cut(s)	740, 1292, 1646, 1658
HinfI	GANTC	6 cut(s)	631, 851, 997, 1465, 1694, 1949
HpaII	CCGG	3 cut(s)	236, 985, 1179
HphI	GGTGA	4 cut(s)	947, 1193, 1450, 1625
Hpy166II	GTNNAC	8 cut(s)	66, 455, 598, 675, 1422, 1561, 1736, 1883
Hpy188I	TCNGA	8 cut(s)	847, 996, 1241, 1355, 1458, 1598, 1814, 1954
Hpy188III	TCNNGA	7 cut(s)	245, 722, 824, 1122, 1469, 1479, 1589
Hpy8I	GTNNAC	8 cut(s)	66, 455, 598, 675, 1422, 1561, 1736, 1883
Hpy99I	CGWCG	1 cut(s)	864
HpyAV	CCTTC	6 cut(s)	253, 537, 1090, 1346, 1695, 1809
HpyCH4III	ACNGT	8 cut(s)	28, 459, 595, 679, 898, 1054, 1475, 1907
HpyF10VI	GCNNNNNNNGC	9 cut(s)	392, 899, 929, 938, 1115, 1184, 1256, 1265, 1549
Hsp92II	CATG	6 cut(s)	248, 374, 806, 964, 1472, 1559
HspAI	GCGC	1 cut(s)	1831
Ksp22I	TGATCA	1 cut(s)	1486
Kzo9I	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
LmnI	GCTCC	2 cut(s)	1220, 1599
Lsp1109I	GCAGC	8 cut(s)	116, 928, 1234, 1531, 1555, 1558, 1561, 1591
LweI	GCATC	3 cut(s)	430, 964, 1127
MabI	ACCWGGT	1 cut(s)	529
MaeI	CTAG	1 cut(s)	1575
MaeIII	GTNAC	7 cut(s)	22, 617, 979, 1073, 1438, 1506, 1527
MalI	GATC	6 cut(s)	243, 495, 578, 822, 1413, 1488
MboI	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
MboII	GAAGA	6 cut(s)	709, 865, 983, 1413, 1471, 1474
MfeI	CAATTG	2 cut(s)	173, 415
MflI	RGATCY	1 cut(s)	820
MhlI	GDGCHC	7 cut(s)	212, 677, 818, 1044, 1239, 1282, 1596
MlsI	TGGCCA	1 cut(s)	1259
MluNI	TGGCCA	1 cut(s)	1259
MlyI	GAGTC	1 cut(s)	1474
MmeI	TCCRAC	1 cut(s)	1947
Mox20I	TGGCCA	1 cut(s)	1259
MroXI	GAANNNNTTC	1 cut(s)	410
MscI	TGGCCA	1 cut(s)	1259
MslI	CAYNNNNRTG	2 cut(s)	1326, 1841
Msp20I	TGGCCA	1 cut(s)	1259
MspA1I	CMGCKG	2 cut(s)	107, 1691
MspCI	CTTAAG	1 cut(s)	1001
MspI	CCGG	3 cut(s)	236, 985, 1179
MspR9I	CCNGG	5 cut(s)	531, 647, 985, 986, 1788
MunI	CAATTG	2 cut(s)	173, 415
Mva1269I	GAATGC	3 cut(s)	388, 397, 1321
MvaI	CCWGG	3 cut(s)	531, 647, 1788
MwoI	GCNNNNNNNGC	9 cut(s)	392, 899, 929, 938, 1115, 1184, 1256, 1265, 1549
NciI	CCSGG	2 cut(s)	985, 986
NdeI	CATATG	1 cut(s)	499
NdeII	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
NlaIII	CATG	6 cut(s)	248, 374, 806, 964, 1472, 1559
NlaIV	GGNNCC	6 cut(s)	149, 485, 515, 706, 1304, 1683
NmuCI	GTSAC	6 cut(s)	22, 617, 979, 1073, 1438, 1527
NsbI	TGCGCA	1 cut(s)	1832
NspI	RCATGY	2 cut(s)	374, 964
PaeI	GCATGC	1 cut(s)	964
PaeR7I	CTCGAG	1 cut(s)	1275
PagI	TCATGA	2 cut(s)	244, 1468
PaqCI	CACCTGC	2 cut(s)	41, 923
PctI	GAATGC	3 cut(s)	388, 397, 1321
PdmI	GAANNNNTTC	1 cut(s)	410
PfeI	GAWTC	5 cut(s)	631, 851, 997, 1694, 1949
PinAI	ACCGGT	1 cut(s)	235
PkrI	GCNGC	9 cut(s)	106, 109, 943, 1249, 1521, 1545, 1548, 1551, 1581
PleI	GAGTC	1 cut(s)	1473
PpsI	GAGTC	1 cut(s)	1473
PshBI	ATTAAT	1 cut(s)	1839
PsiI	TTATAA	1 cut(s)	219
Psp124BI	GAGCTC	2 cut(s)	1282, 1596
Psp6I	CCWGG	3 cut(s)	529, 645, 1786
PspGI	CCWGG	3 cut(s)	529, 645, 1786
PspN4I	GGNNCC	6 cut(s)	149, 485, 515, 706, 1304, 1683
PspPI	GGNCC	5 cut(s)	484, 514, 705, 908, 1682
PspXI	VCTCGAGB	1 cut(s)	1275
PstNI	CAGNNNCTG	1 cut(s)	902
PsuI	RGATCY	1 cut(s)	820
PvuII	CAGCTG	1 cut(s)	1691
RsaI	GTAC	5 cut(s)	139, 627, 1060, 1605, 1771
RsaNI	GTAC	5 cut(s)	138, 626, 1059, 1604, 1770
RseI	CAYNNNNRTG	2 cut(s)	1326, 1841
SacI	GAGCTC	2 cut(s)	1282, 1596
SalI	GTCGAC	1 cut(s)	1420
SatI	GCNGC	9 cut(s)	105, 108, 942, 1248, 1520, 1544, 1547, 1550, 1580
Sau3AI	GATC	6 cut(s)	241, 493, 576, 820, 1411, 1486
Sau96I	GGNCC	5 cut(s)	484, 514, 705, 908, 1682
SchI	GAGTC	1 cut(s)	1474
ScrFI	CCNGG	5 cut(s)	531, 647, 985, 986, 1788
SduI	GDGCHC	7 cut(s)	212, 677, 818, 1044, 1239, 1282, 1596
SexAI	ACCWGGT	1 cut(s)	529
SfaNI	GCATC	3 cut(s)	430, 964, 1127
Sfr274I	CTCGAG	1 cut(s)	1275
SinI	GGWCC	4 cut(s)	484, 514, 705, 908
SlaI	CTCGAG	1 cut(s)	1275
SmaI	CCCGGG	1 cut(s)	986
SmiMI	CAYNNNNRTG	2 cut(s)	1326, 1841
SmlI	CTYRAG	3 cut(s)	1001, 1275, 1589
SmoI	CTYRAG	3 cut(s)	1001, 1275, 1589
SphI	GCATGC	1 cut(s)	964
SsiI	CCGC	3 cut(s)	58, 107, 683
SspMI	CTAG	1 cut(s)	1575
SstI	GAGCTC	2 cut(s)	1282, 1596
StyD4I	CCNGG	5 cut(s)	529, 645, 983, 984, 1786
TaaI	ACNGT	8 cut(s)	28, 459, 595, 679, 898, 1054, 1475, 1907
TaqI	TCGA	7 cut(s)	169, 461, 862, 1276, 1399, 1421, 1775
TauI	GCSGC	1 cut(s)	110
TfiI	GAWTC	5 cut(s)	631, 851, 997, 1694, 1949
TscAI	CASTG	2 cut(s)	682, 1912
TseFI	GTSAC	6 cut(s)	22, 617, 979, 1073, 1438, 1527
TseI	GCWGC	8 cut(s)	104, 941, 1247, 1519, 1543, 1546, 1549, 1579
Tsp45I	GTSAC	6 cut(s)	22, 617, 979, 1073, 1438, 1527
TspDTI	ATGAA	5 cut(s)	179, 272, 419, 1029, 1544
TspGWI	ACGGA	2 cut(s)	986, 1233
TspMI	CCCGGG	1 cut(s)	984
TspRI	CASTG	2 cut(s)	682, 1912
Vha464I	CTTAAG	1 cut(s)	1001
VneI	GTGCAC	1 cut(s)	673
VpaK11BI	GGWCC	4 cut(s)	484, 514, 705, 908
VspI	ATTAAT	1 cut(s)	1839
XapI	RAATTY	3 cut(s)	430, 869, 1370
XceI	RCATGY	2 cut(s)	374, 964
XhoI	CTCGAG	1 cut(s)	1275
XmaI	CCCGGG	1 cut(s)	984
XmiI	GTMKAC	2 cut(s)	65, 1421
XmnI	GAANNNNTTC	1 cut(s)	410
XspI	CTAG	1 cut(s)	1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.