Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005725.1

Orthogroup ID

OG0005668

Physical Location & Seq

Genomic Coordinates Reverse (-)

25981 .. 29514

Gene Structure 3534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005725.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

atgaatcctccaaacgaattccccgacgatttttcgtctttccctcctattccattcgccctcttcgtcccccctgaaaaccctaaccctaaccctaacccgaatcctaattcaaccgcagctccgagtccgacctcaatcgaagaccctagctccgctcatctactctcattcacggtcccgaagaagcggaggcgaggcaggcctcaccgacctgcgacgtcgtttcaggtacctcaaatactcaacggcggtttcaatagtaactcccttgcttcttcttcttctggctcaatttcagctcatccgattagacacaatgcggaaaaccctagttcttctgcaaaggcagggccggatatgtccgacgagatcattgtgatcaataaggagtccacggccgaggcgttgatcgcgctctcggctgggtttcctgccgattctctcacagaggaggaaatcgatttcggggttattcgggttattgggggaatagagcaggtcaattatattctcattcggaaccatatcattgcaaaatggcgcgaaaatgtgtccaattgggtcgcaaaggatatttttgttaactctatacccaagcattgtcatgctcttttagactctacttataactatttggtttcacatggatatattaattttgggattgcaccggccattaaggagaagattcccgcggagcctagtaagccgagtgtgattatcattggtgctgggcttgctggtcttgctgctgccaggcaaatgatgcgtttcgggtttaaagtgactgttttggagggtaggaagcgtgcaggtgggcgggtgtacactaagaaaatggaaggaggaattagggcatgtcaagcagcggcggatttagggggtagtgttttgactggtacattagggaacccacttggcattgttgctcgccaattgggctactcgcttcataagattagagacaagtgcccgctttataatgtggaggggaaaccggtagatcatgatatggatatgaaggtggaaagtgtttttaatcatcttttagataaggcaagtaggcttaggcagtcaatgggtggggtttcggttgatgtgtctcttggttcggcattggaaacattctggcatgtttctgggaatgctgtgaatgctgaggagatgaacttgttcaattggcatcttgcgaatttggaatacgcaaatgcaggtttactgtcgaaactttcgcttgcattttgggaccaagatgatccatatgatatgggaggggaccattgcttcttacctggtggtaatggaaggctggtgcaggctttggcagagaatgtgccgatcctatatgagaaaactgttcacaccataaggtatggtagtgacggggtacagattcttgctggaagccaggcttttgagggtgatatggttttgtgcactgttccgcttggtgttctgaagagtgggtccatcaagtttattcctgagttgcctcagcgaaagcttgatggaattaagaggttgggttttggtttgttgaataaggttgcaatgctttttcctcatgtgttttggggcacagatcttgatacattcggccatctgtctgatgattcaagccgtcgaggggaattcttcctgttttacagctatgcaacagttgctggtggtcctctcttgcttgctttagtagcaggtgaagctgcacataagtttgagagcatgccccctacggatgctgtgacccgggttcttcagattcttaagggtatttatgaaccacaaggaattagtgtcccagagcccatccaaacagtctgtaccagatggggaagtgaccccttcagcctcggttcttactctaatgttgcagttggggcatcaggagatgattatgatatcttagcagaaagtgttggagatgggcgacttttctttgccggtgaggctaccaataggagatatcctgcaactatgcacggagctttccttagtgggctcagagaagctgcaaatatggccaactatgctaatgctcgagctctgaggataaagcttaacaggaacccatcaaagaatgcccattcttgtgcttcccttcttgcagatttattcagagagcctgatttagaatttgggagtttttctgttatttttggtcgaagaaatgctgatcccaagtcaacagcaattttaagggtgacatttaatgaccctcggaagaagagtcatgacggttcaagacctgatcaacagcactcaaataagttactttttcagcagcttcagtcacattttaatcagcagcagcagcttcatgtttacactttgttatctaggcagcaggctcttgagctccgagaagtacgaggtggtgatgagatgaggttgaattacctctgtgaaaagcttggagtgaagcttgtggggagaaagggtttggggccttcagctgattctgtaattgccttaataaaagctgagaggggcaatcgtaaacctgcttcaactttatcatcttttaagtctggtacatcaaagctgaaacctggcactttgaaacgaaaattggtcagaagggctaaaatattgcgcagcattaatgcgtctcccctttctgctaattcaaacttggctagtaaactcccagaggaaaataagaacagtgttcaagtagtctccaacacactcggttcaggccaaaacgattctgaggtgttgaagcaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009987 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0035601 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0071704 GO:0071840 GO:0098732 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

910

Amino Acids

98.93

Weight (kDa)

9.04

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10390 AT3G10390 AT3G10390 AT3G10390
fragaria_vesca	FvH4_7g18750 FvH4_7g18750 FvH4_7g18750 FvH4_7g18750
malus_domestica	MD01G1103000.v1.1
prunus_persica	Prupe.2G208600_v2.0.a1 Prupe.2G208600_v2.0.a1
pyrus_communis	pycom01g12950 pycom07g16350
rosa_chinensis	RchiOBHm_Chr1g0362561
rosa_laevigata	RLG00000027639
rosa_multiflora	Rmu_sc0005725.1_g000006
rosa_roxburghii	Rroxscaffold_4G00293970
rosa_rugosa	Rorug01G0299000 Rorug01G0299100 Rorug01G0299200 Rorug01G0299300 Rorug01G0299300 Rorug01G0299400
rosa_samantha	Rh1AG308200 Rh1BG271200 Rh1CG289100 Rh1DG301600
rosa_wichuraiana	Rw1G027350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	630, 984
AarI	CACCTGC	2 cut(s)	806, 1688
AatII	GACGTC	1 cut(s)	224
Acc16I	TGCGCA	1 cut(s)	2597
Acc36I	ACCTGC	6 cut(s)	223, 490, 806, 1205, 1688, 2512
Acc65I	GGTACC	1 cut(s)	232
AccB1I	GGYRCC	1 cut(s)	232
AccBSI	CCGCTC	1 cut(s)	158
AccII	CGCG	3 cut(s)	416, 546, 698
AclWI	GGATC	3 cut(s)	1253, 1336, 2171
AcoI	YGGCCR	4 cut(s)	399, 675, 1600, 2022
AcsI	RAATTY	4 cut(s)	17, 1195, 1634, 2135
AcuI	CTGAAG	5 cut(s)	1481, 1742, 1831, 2273, 2436
AcyI	GRCGYC	1 cut(s)	221
AfaI	GTAC	7 cut(s)	234, 830, 904, 1392, 1825, 2370, 2536
AfiI	CCNNNNNNNGG	1 cut(s)	1630
AflII	CTTAAG	1 cut(s)	1766
AgeI	ACCGGT	1 cut(s)	1000
AjnI	CCWGG	4 cut(s)	758, 1294, 1410, 2551
AjuI	GAANNNNNNNTTGG	2 cut(s)	2555, 2587
Alw21I	GWGCWC	3 cut(s)	1442, 2047, 2361
Alw26I	GTCTC	4 cut(s)	960, 1110, 2616, 2686
Alw44I	GTGCAC	1 cut(s)	1438
AlwI	GGATC	3 cut(s)	1253, 1336, 2171
AlwNI	CAGNNNCTG	1 cut(s)	1667
Ama87I	CYCGRG	2 cut(s)	1749, 2040
AoxI	GGCC	8 cut(s)	203, 353, 399, 675, 1600, 2022, 2447, 2701
ApaLI	GTGCAC	1 cut(s)	1438
ApoI	RAATTY	4 cut(s)	17, 1195, 1634, 2135
AseI	ATTAAT	2 cut(s)	657, 2604
AsiGI	ACCGGT	1 cut(s)	1000
Asp700I	GAANNNNTTC	1 cut(s)	1175
Asp718I	GGTACC	1 cut(s)	232
AspLEI	GCGC	3 cut(s)	418, 546, 2598
AspS9I	GGNCC	7 cut(s)	178, 353, 1249, 1279, 1470, 1673, 2447
AsuC2I	CCSGG	2 cut(s)	1750, 1751
AsuHPI	GGTGA	6 cut(s)	200, 1436, 1712, 1958, 2215, 2390
AvaI	CYCGRG	2 cut(s)	1749, 2040
AvaII	GGWCC	5 cut(s)	178, 1249, 1279, 1470, 1673
BaeGI	GKGCMC	3 cut(s)	977, 1442, 1583
BalI	TGGCCA	1 cut(s)	2024
BanI	GGYRCC	1 cut(s)	232
BanII	GRGCYC	4 cut(s)	1809, 2004, 2047, 2361
BarI	GAAGNNNNNNTAC	2 cut(s)	2491, 2523
BbsI	GAAGAC	1 cut(s)	150
Bbv12I	GWGCWC	3 cut(s)	1442, 2047, 2361
BbvCI	CCTCAGC	2 cut(s)	1161, 1497
BccI	CCATC	7 cut(s)	1481, 1505, 1611, 1817, 1824, 1919, 2080
BceAI	ACGGC	3 cut(s)	265, 414, 1608
BciT130I	CCWGG	4 cut(s)	760, 1296, 1412, 2553
BclI	TGATCA	2 cut(s)	381, 2251
BcnI	CCSGG	2 cut(s)	1750, 1751
BcoDI	GTCTC	4 cut(s)	960, 1110, 2616, 2686
BfaI	CTAG	5 cut(s)	150, 333, 705, 2340, 2640
BfrI	CTTAAG	1 cut(s)	1766
BfuAI	ACCTGC	6 cut(s)	223, 490, 806, 1205, 1688, 2512
BglI	GCCNNNNNGGC	2 cut(s)	942, 1949
BglII	AGATCT	1 cut(s)	1585
Bme1390I	CCNGG	6 cut(s)	760, 1296, 1412, 1750, 1751, 2553
Bme18I	GGWCC	5 cut(s)	178, 1249, 1279, 1470, 1673
BmeT110I	CYCGRG	2 cut(s)	1749, 2040
BmgT120I	GGNCC	7 cut(s)	178, 353, 1249, 1279, 1470, 1673, 2447
BmrFI	CCNGG	6 cut(s)	760, 1296, 1412, 1750, 1751, 2553
BmsI	GCATC	4 cut(s)	759, 1195, 1729, 1892
BpiI	GAAGAC	1 cut(s)	150
Bpu10I	CCTNAGC	3 cut(s)	1070, 1161, 1497
BpuEI	CTTGAG	1 cut(s)	2375
BpuMI	CCSGG	2 cut(s)	1750, 1751
Bsa29I	ATCGAT	1 cut(s)	462
BsaHI	GRCGYC	1 cut(s)	221
BsaJI	CCNNGG	6 cut(s)	396, 402, 696, 1749, 1852, 2219
BsaWI	WCCGGW	1 cut(s)	1000
BsaXI	ACNNNNNCTCC	6 cut(s)	106, 136, 137, 167, 2425, 2455
Bsc4I	CCNNNNNNNGG	1 cut(s)	1630
Bse118I	RCCGGY	3 cut(s)	673, 1000, 1943
Bse1I	ACTGG	1 cut(s)	904
Bse3DI	GCAATG	3 cut(s)	531, 1282, 1560
BseBI	CCWGG	4 cut(s)	760, 1296, 1412, 2553
BseCI	ATCGAT	1 cut(s)	462
BseDI	CCNNGG	6 cut(s)	396, 402, 696, 1749, 1852, 2219
BseGI	GGATG	3 cut(s)	304, 1744, 1809
BseLI	CCNNNNNNNGG	1 cut(s)	1630
BseMI	GCAATG	3 cut(s)	531, 1282, 1560
BseMII	CTCAG	7 cut(s)	1152, 1479, 1511, 2017, 2039, 2475, 2706
BseNI	ACTGG	1 cut(s)	904
BseRI	GAGGAG	2 cut(s)	467, 1178
BseSI	GKGCMC	3 cut(s)	977, 1442, 1583
BseX3I	CGGCCG	1 cut(s)	399
BseYI	CCCAGC	2 cut(s)	425, 734
BsgI	GTGCAG	3 cut(s)	834, 1337, 1692
Bsh1236I	CGCG	3 cut(s)	416, 546, 698
Bsh1285I	CGRYCG	1 cut(s)	402
BshFI	GGCC	8 cut(s)	205, 355, 401, 677, 1602, 2024, 2449, 2703
BshNI	GGYRCC	1 cut(s)	232
BshTI	ACCGGT	1 cut(s)	1000
BshVI	ATCGAT	1 cut(s)	462
BsiEI	CGRYCG	1 cut(s)	402
BsiHKAI	GWGCWC	3 cut(s)	1442, 2047, 2361
BsiHKCI	CYCGRG	2 cut(s)	1749, 2040
BsiSI	CCGG	5 cut(s)	356, 674, 1001, 1750, 1944
BslFI	GGGAC	5 cut(s)	53, 164, 1262, 1292, 1784
BslI	CCNNNNNNNGG	1 cut(s)	1630
BsmAI	GTCTC	4 cut(s)	960, 1110, 2616, 2686
BsmBI	CGTCTC	1 cut(s)	2616
BsmFI	GGGAC	5 cut(s)	53, 164, 1262, 1292, 1784
BsmI	GAATGC	3 cut(s)	1153, 1162, 2086
BsnI	GGCC	8 cut(s)	205, 355, 401, 677, 1602, 2024, 2449, 2703
BsoBI	CYCGRG	2 cut(s)	1749, 2040
Bsp1286I	GDGCHC	7 cut(s)	977, 1442, 1583, 1809, 2004, 2047, 2361
Bsp1407I	TGTACA	1 cut(s)	828
Bsp143I	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
BspANI	GGCC	8 cut(s)	205, 355, 401, 677, 1602, 2024, 2449, 2703
BspCNI	CTCAG	7 cut(s)	1153, 1480, 1510, 2016, 2040, 2476, 2707
BspDI	ATCGAT	1 cut(s)	462
BspFNI	CGCG	3 cut(s)	416, 546, 698
BspHI	TCATGA	2 cut(s)	1009, 2233
BspMI	ACCTGC	6 cut(s)	223, 490, 806, 1205, 1688, 2512
BspPI	GGATC	3 cut(s)	1253, 1336, 2171
BspT107I	GGYRCC	1 cut(s)	232
BspTI	CTTAAG	1 cut(s)	1766
BsrBI	CCGCTC	1 cut(s)	158
BsrDI	GCAATG	3 cut(s)	531, 1282, 1560
BsrFI	RCCGGY	3 cut(s)	673, 1000, 1943
BsrGI	TGTACA	1 cut(s)	828
BsrI	ACTGG	1 cut(s)	904
BssAI	RCCGGY	3 cut(s)	673, 1000, 1943
BssECI	CCNNGG	6 cut(s)	396, 402, 696, 1749, 1852, 2219
BssMI	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
BssNI	GRCGYC	1 cut(s)	221
Bst2UI	CCWGG	4 cut(s)	760, 1296, 1412, 2553
Bst4CI	ACNGT	9 cut(s)	178, 793, 1224, 1360, 1444, 1663, 1819, 2240, 2669
Bst6I	CTCTTC	3 cut(s)	68, 1457, 2222
BstACI	GRCGYC	1 cut(s)	221
BstAFI	CTTAAG	1 cut(s)	1766
BstAPI	GCANNNNNTGC	2 cut(s)	769, 1664
BstAUI	TGTACA	1 cut(s)	828
BstDSI	CCRYGG	2 cut(s)	396, 696
BstF5I	GGATG	3 cut(s)	304, 1744, 1809
BstFNI	CGCG	3 cut(s)	416, 546, 698
BstHHI	GCGC	3 cut(s)	418, 546, 2598
BstKTI	GATC	9 cut(s)	375, 384, 414, 1009, 1261, 1344, 1588, 2179, 2254
BstMAI	GTCTC	4 cut(s)	960, 1110, 2616, 2686
BstMBI	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
BstMCI	CGRYCG	1 cut(s)	402
BstNI	CCWGG	4 cut(s)	760, 1296, 1412, 2553
BstNSI	RCATGY	3 cut(s)	864, 1139, 1729
BstSCI	CCNGG	6 cut(s)	758, 1294, 1410, 1748, 1749, 2551
BstSLI	GKGCMC	3 cut(s)	977, 1442, 1583
BstUI	CGCG	3 cut(s)	416, 546, 698
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	1 cut(s)	1585
BstYI	RGATCY	1 cut(s)	1585
BstZI	CGGCCG	1 cut(s)	399
Bsu15I	ATCGAT	1 cut(s)	462
BsuRI	GGCC	8 cut(s)	205, 355, 401, 677, 1602, 2024, 2449, 2703
BsuTUI	ATCGAT	1 cut(s)	462
BtgI	CCRYGG	2 cut(s)	396, 696
BtsCI	GGATG	3 cut(s)	304, 1744, 1809
BtsIMutI	CAGTG	2 cut(s)	1440, 2674
BveI	ACCTGC	6 cut(s)	223, 490, 806, 1205, 1688, 2512
CaiI	CAGNNNCTG	1 cut(s)	1667
CciI	TCATGA	2 cut(s)	1009, 2233
CfoI	GCGC	3 cut(s)	418, 546, 2598
Cfr10I	RCCGGY	3 cut(s)	673, 1000, 1943
Cfr13I	GGNCC	7 cut(s)	178, 353, 1249, 1279, 1470, 1673, 2447
Cfr42I	CCGCGG	1 cut(s)	699
Cfr9I	CCCGGG	1 cut(s)	1749
ClaI	ATCGAT	1 cut(s)	462
CseI	GACGC	1 cut(s)	2598
CsiI	ACCWGGT	1 cut(s)	1294
Csp6I	GTAC	7 cut(s)	233, 829, 903, 1391, 1824, 2369, 2535
CspAI	ACCGGT	1 cut(s)	1000
CviAII	CATG	9 cut(s)	608, 647, 861, 1010, 1136, 1568, 1726, 2234, 2321
CviQI	GTAC	7 cut(s)	233, 829, 903, 1391, 1824, 2369, 2535
DpnI	GATC	9 cut(s)	374, 383, 413, 1008, 1260, 1343, 1587, 2178, 2253
DpnII	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
DraI	TTTAAA	1 cut(s)	784
EaeI	YGGCCR	4 cut(s)	399, 675, 1600, 2022
EagI	CGGCCG	1 cut(s)	399
Eam1104I	CTCTTC	3 cut(s)	68, 1457, 2222
EarI	CTCTTC	3 cut(s)	68, 1457, 2222
EciI	GGCGGA	1 cut(s)	890
Ecl136II	GAGCTC	2 cut(s)	2045, 2359
EclXI	CGGCCG	1 cut(s)	399
Eco147I	AGGCCT	1 cut(s)	205
Eco24I	GRGCYC	4 cut(s)	1809, 2004, 2047, 2361
Eco32I	GATATC	2 cut(s)	1903, 1967
Eco47I	GGWCC	5 cut(s)	178, 1249, 1279, 1470, 1673
Eco52I	CGGCCG	1 cut(s)	399
Eco53kI	GAGCTC	2 cut(s)	2045, 2359
Eco57I	CTGAAG	5 cut(s)	1481, 1742, 1831, 2273, 2436
Eco88I	CYCGRG	2 cut(s)	1749, 2040
EcoICRI	GAGCTC	2 cut(s)	2045, 2359
EcoO109I	RGGNCCY	1 cut(s)	2447
EcoRI	GAATTC	2 cut(s)	17, 1634
EcoRII	CCWGG	4 cut(s)	758, 1294, 1410, 2551
EcoRV	GATATC	2 cut(s)	1903, 1967
EcoT38I	GRGCYC	4 cut(s)	1809, 2004, 2047, 2361
Esp3I	CGTCTC	1 cut(s)	2616
FaeI	CATG	9 cut(s)	611, 650, 864, 1013, 1139, 1571, 1729, 2237, 2324
FalI	AAGNNNNNCTT	2 cut(s)	1399, 1431
FaqI	GGGAC	5 cut(s)	53, 164, 1262, 1292, 1784
FatI	CATG	9 cut(s)	607, 646, 860, 1009, 1135, 1567, 1725, 2233, 2320
FauI	CCCGC	3 cut(s)	703, 816, 984
FauNDI	CATATG	1 cut(s)	1264
FbaI	TGATCA	2 cut(s)	381, 2251
FokI	GGATG	3 cut(s)	291, 1751, 1796
FriOI	GRGCYC	4 cut(s)	1809, 2004, 2047, 2361
FspBI	CTAG	5 cut(s)	150, 333, 705, 2340, 2640
FspI	TGCGCA	1 cut(s)	2597
GlaI	GCGC	3 cut(s)	417, 545, 2597
GsaI	CCCAGC	2 cut(s)	429, 738
HaeIII	GGCC	8 cut(s)	205, 355, 401, 677, 1602, 2024, 2449, 2703
HapII	CCGG	5 cut(s)	356, 674, 1001, 1750, 1944
HgaI	GACGC	1 cut(s)	2598
HhaI	GCGC	3 cut(s)	418, 546, 2598
Hin1I	GRCGYC	1 cut(s)	221
Hin1II	CATG	9 cut(s)	611, 650, 864, 1013, 1139, 1571, 1729, 2237, 2324
Hin6I	GCGC	3 cut(s)	416, 544, 2596
HinP1I	GCGC	3 cut(s)	416, 544, 2596
HincII	GTYRAC	2 cut(s)	586, 2187
HindII	GTYRAC	2 cut(s)	586, 2187
HindIII	AAGCTT	4 cut(s)	1505, 2057, 2411, 2423
HpaI	GTTAAC	1 cut(s)	586
HpaII	CCGG	5 cut(s)	356, 674, 1001, 1750, 1944
HphI	GGTGA	6 cut(s)	200, 1436, 1712, 1958, 2215, 2390
Hpy188III	TCNNGA	8 cut(s)	181, 1010, 1487, 1589, 1887, 2234, 2244, 2354
Hpy99I	CGWCG	5 cut(s)	29, 223, 226, 371, 1629
HpyAV	CCTTC	7 cut(s)	839, 1018, 1302, 1855, 2111, 2460, 2574
HpyCH4III	ACNGT	9 cut(s)	178, 793, 1224, 1360, 1444, 1663, 1819, 2240, 2669
HpyCH4IV	ACGT	1 cut(s)	221
HpySE526I	ACGT	1 cut(s)	221
Hsp92I	GRCGYC	1 cut(s)	221
Hsp92II	CATG	9 cut(s)	611, 650, 864, 1013, 1139, 1571, 1729, 2237, 2324
HspAI	GCGC	3 cut(s)	416, 544, 2596
KpnI	GGTACC	1 cut(s)	236
Ksp22I	TGATCA	2 cut(s)	381, 2251
KspAI	GTTAAC	1 cut(s)	586
KspI	CCGCGG	1 cut(s)	699
Kzo9I	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
LmnI	GCTCC	5 cut(s)	127, 158, 700, 1985, 2364
LweI	GCATC	4 cut(s)	759, 1195, 1729, 1892
MabI	ACCWGGT	1 cut(s)	1294
MaeI	CTAG	5 cut(s)	150, 333, 705, 2340, 2640
MaeII	ACGT	1 cut(s)	221
MaeIII	GTNAC	8 cut(s)	263, 787, 1382, 1744, 1838, 2203, 2271, 2292
MalI	GATC	9 cut(s)	374, 383, 413, 1008, 1260, 1343, 1587, 2178, 2253
MbiI	CCGCTC	1 cut(s)	158
MboI	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
MfeI	CAATTG	3 cut(s)	559, 938, 1180
MflI	RGATCY	1 cut(s)	1585
MhlI	GDGCHC	7 cut(s)	977, 1442, 1583, 1809, 2004, 2047, 2361
MlsI	TGGCCA	1 cut(s)	2024
MluNI	TGGCCA	1 cut(s)	2024
MlyI	GAGTC	4 cut(s)	136, 401, 614, 2239
MmeI	TCCRAC	4 cut(s)	155, 390, 1900, 2709
Mox20I	TGGCCA	1 cut(s)	2024
MroXI	GAANNNNTTC	1 cut(s)	1175
MscI	TGGCCA	1 cut(s)	2024
MslI	CAYNNNNRTG	2 cut(s)	606, 2091
Msp20I	TGGCCA	1 cut(s)	2024
MspA1I	CMGCKG	3 cut(s)	698, 872, 2456
MspCI	CTTAAG	1 cut(s)	1766
MspI	CCGG	5 cut(s)	356, 674, 1001, 1750, 1944
MspR9I	CCNGG	6 cut(s)	760, 1296, 1412, 1750, 1751, 2553
MunI	CAATTG	3 cut(s)	559, 938, 1180
Mva1269I	GAATGC	3 cut(s)	1153, 1162, 2086
MvaI	CCWGG	4 cut(s)	760, 1296, 1412, 2553
MvnI	CGCG	3 cut(s)	416, 546, 698
NciI	CCSGG	2 cut(s)	1750, 1751
NdeI	CATATG	1 cut(s)	1264
NdeII	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
NlaIII	CATG	9 cut(s)	611, 650, 864, 1013, 1139, 1571, 1729, 2237, 2324
NmeAIII	GCCGAG	3 cut(s)	401, 427, 738
NmuCI	GTSAC	6 cut(s)	787, 1382, 1744, 1838, 2203, 2292
NsbI	TGCGCA	1 cut(s)	2597
NspI	RCATGY	3 cut(s)	864, 1139, 1729
PaeI	GCATGC	1 cut(s)	1729
PaeR7I	CTCGAG	1 cut(s)	2040
PagI	TCATGA	2 cut(s)	1009, 2233
PaqCI	CACCTGC	2 cut(s)	806, 1688
PceI	AGGCCT	1 cut(s)	205
PcsI	WCGNNNNNNNCGW	3 cut(s)	21, 63, 404
PctI	GAATGC	3 cut(s)	1153, 1162, 2086
PdmI	GAANNNNTTC	1 cut(s)	1175
PfeI	GAWTC	9 cut(s)	4, 103, 440, 691, 1396, 1616, 1762, 2459, 2711
PinAI	ACCGGT	1 cut(s)	1000
PleI	GAGTC	4 cut(s)	135, 400, 614, 2238
PpsI	GAGTC	4 cut(s)	135, 400, 614, 2238
PshBI	ATTAAT	2 cut(s)	657, 2604
PsiI	TTATAA	2 cut(s)	630, 984
Psp124BI	GAGCTC	2 cut(s)	2047, 2361
Psp6I	CCWGG	4 cut(s)	758, 1294, 1410, 2551
PspFI	CCCAGC	2 cut(s)	425, 734
PspGI	CCWGG	4 cut(s)	758, 1294, 1410, 2551
PspPI	GGNCC	7 cut(s)	178, 353, 1249, 1279, 1470, 1673, 2447
PspXI	VCTCGAGB	1 cut(s)	2040
PstNI	CAGNNNCTG	1 cut(s)	1667
PsuI	RGATCY	1 cut(s)	1585
PvuII	CAGCTG	1 cut(s)	2456
RsaI	GTAC	7 cut(s)	234, 830, 904, 1392, 1825, 2370, 2536
RsaNI	GTAC	7 cut(s)	233, 829, 903, 1391, 1824, 2369, 2535
RseI	CAYNNNNRTG	2 cut(s)	606, 2091
SacI	GAGCTC	2 cut(s)	2047, 2361
SacII	CCGCGG	1 cut(s)	699
Sau3AI	GATC	9 cut(s)	372, 381, 411, 1006, 1258, 1341, 1585, 2176, 2251
Sau96I	GGNCC	7 cut(s)	178, 353, 1249, 1279, 1470, 1673, 2447
SchI	GAGTC	4 cut(s)	136, 401, 614, 2239
ScrFI	CCNGG	6 cut(s)	760, 1296, 1412, 1750, 1751, 2553
SduI	GDGCHC	7 cut(s)	977, 1442, 1583, 1809, 2004, 2047, 2361
SexAI	ACCWGGT	1 cut(s)	1294
SfaNI	GCATC	4 cut(s)	759, 1195, 1729, 1892
Sfr274I	CTCGAG	1 cut(s)	2040
Sfr303I	CCGCGG	1 cut(s)	699
SgrBI	CCGCGG	1 cut(s)	699
SinI	GGWCC	5 cut(s)	178, 1249, 1279, 1470, 1673
SlaI	CTCGAG	1 cut(s)	2040
SmaI	CCCGGG	1 cut(s)	1751
SmiMI	CAYNNNNRTG	2 cut(s)	606, 2091
SmlI	CTYRAG	3 cut(s)	1766, 2040, 2354
SmoI	CTYRAG	3 cut(s)	1766, 2040, 2354
SphI	GCATGC	1 cut(s)	1729
SseBI	AGGCCT	1 cut(s)	205
SspI	AATATT	1 cut(s)	2592
SspMI	CTAG	5 cut(s)	150, 333, 705, 2340, 2640
SstI	GAGCTC	2 cut(s)	2047, 2361
StuI	AGGCCT	1 cut(s)	205
StyD4I	CCNGG	6 cut(s)	758, 1294, 1410, 1748, 1749, 2551
TaaI	ACNGT	9 cut(s)	178, 793, 1224, 1360, 1444, 1663, 1819, 2240, 2669
TaiI	ACGT	1 cut(s)	224
TaqI	TCGA	6 cut(s)	141, 462, 1226, 1627, 2041, 2164
TatI	WGTACW	1 cut(s)	828
TauI	GCSGC	1 cut(s)	875
TfiI	GAWTC	9 cut(s)	4, 103, 440, 691, 1396, 1616, 1762, 2459, 2711
TscAI	CASTG	2 cut(s)	1447, 2674
TseFI	GTSAC	6 cut(s)	787, 1382, 1744, 1838, 2203, 2292
Tsp45I	GTSAC	6 cut(s)	787, 1382, 1744, 1838, 2203, 2292
TspDTI	ATGAA	6 cut(s)	17, 944, 1037, 1184, 1794, 2309
TspGWI	ACGGA	2 cut(s)	1751, 1998
TspMI	CCCGGG	1 cut(s)	1749
TspRI	CASTG	2 cut(s)	1447, 2674
Vha464I	CTTAAG	1 cut(s)	1766
VneI	GTGCAC	1 cut(s)	1438
VpaK11BI	GGWCC	5 cut(s)	178, 1249, 1279, 1470, 1673
VspI	ATTAAT	2 cut(s)	657, 2604
XapI	RAATTY	4 cut(s)	17, 1195, 1634, 2135
XceI	RCATGY	3 cut(s)	864, 1139, 1729
XhoI	CTCGAG	1 cut(s)	2040
XmaI	CCCGGG	1 cut(s)	1749
XmnI	GAANNNNTTC	1 cut(s)	1175
XspI	CTAG	5 cut(s)	150, 333, 705, 2340, 2640
ZraI	GACGTC	1 cut(s)	222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.