Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008794

Physical Location & Seq

Genomic Coordinates Reverse (-)

24657783 .. 24663731

Gene Structure 5949 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G216000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGGAGAACCCAGAAGCAAATCAGCTTCCTGAAGTTGATTCATTGCCTGATGGGTTTGTTGAGAGCCCTCCAGAGCCCCTGGCTCCTCCAACTCCAACCTTTGAACAAGAGAAGCCACTGGACAATCGTGAGGATGATATTGCCTCAGATATAGATCGTTCAAAGGAACCTGTAGAAGAATTGGCTGCAGATGAGTTTCAAACAAGTCAGGGTAGGACAGAGAAGACCCAGAAACTGAGAACCTTTCCTGTTCCATTATCGGAAACTGATAGTTCTGATGTTTCAGTGGAATCAGTTCAAGTGCCCAAAAGGGCTTCTACGGAGCAGACAGAAGAAGGAGGTACGCTAGTCATGCCTGACTCAGCTGATTCTGTTTCTGAGACTTCAGTTGGGGTACCTGAATGCAGTGAGGTAAAGGAACAAGTTGAAGCAAGATGTCAAAGTTCAGAGAGACCGACTGAAGGAGGCTCAGATTCGTCAGCAGCCAATGTGAAGGAAACATCATCATTGGAGAGTGTTGAAACTCTGAAAAGCAAAAAGACAGAATCCACTGAAACCAAACGTAAGAGTGCAAAGCGTACCTTTAAATCAGAAAAGGAGTTCATAGAGTTCACCTTGAAGTATCAACAAGTTCTTGCTGAAAGAGATTCAGCCATTTCTGTTCGAGATAAGCTTGAGTCGTTGTGCAGGGAGTTACAACGCCAGAACAAAGTGCTAATGGATGAGTGTAAGCGGGTGTCAACAGAGGGGCAGAACTTGAGATTAGATTTATCAGTCAAGTTCCAAGATGCAATAAAGGATGTGAGCAATAAGCTAGATGAGCAAAAAGAAGAATGTATCTCTCAGCTAAAGGAGAATGAAATGTTAAGAACCAAGCTGCAGCAGCTCACCTATCAGTATGCTCTTTCTGAACAGCAATATGAACAGAAGTTAAAGCAGAAGTCTCTGGAGCTTCAAATTGCTGATTTGAAGATTAAGCAGCATGAAGAGAAGTTAATCCAGGAACAGTCCCAGATGAAACTATATGCAGAACAGGTGTCACAGTTACTATCAACTGAAAAGAATTTGCGCTTACAGTTGACAGCTGATGGAGAGAAATTCCAACAATTTCAGGATGCATTGTTGAAAAGCAATGAAGTTTTTGAGACATTTAAACAGGAGATCGAAAAGATGGCAAAATCTATCAAGGAACTCAAGAAGGAAAATTTATTCTTGAAGAGCAAATGTGAGAAAACAGATGTTACTCTTATAGAACTCGTAGATGAGCGTGAACGGTTGAAGAAACAGTTGGAGAAAACAAAGAATCAGAAAGAAAAGCTTGAATCCTTGTGCCGATCACTTCAAGCAGAAAGGAAGCAGAATTCCATCGGCAGCAACAACTCCGATTCAGTTCCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Taxilin

Protein Analysis

467

Amino Acids

53.14

Weight (kDa)

4.94

Isoelectric Point (pI)

60.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008794)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50840 AT5G50840
fragaria_vesca	FvH4_7g19882
malus_domestica	MD01G1111100.v1.1 MD07G1177300.v1.1
prunus_persica	Prupe.2G216000_v2.0.a1 Prupe.2G216000_v2.0.a1 Prupe.2G216000_v2.0.a1 Prupe.2G216000_v2.0.a1 Prupe.2G216000_v2.0.a1 Prupe.2G216000_v2.0.a1
pyrus_communis	pycom01g13840 pycom07g17130
rosa_chinensis	RchiOBHm_Chr1g0363881
rosa_laevigata	RLG00000027538
rosa_multiflora	Rmu_sc0033310.1_g000001
rosa_roxburghii	Rroxscaffold_4G00292890
rosa_rugosa	Rorug01G0310700
rosa_samantha	Rh1AG318600 Rh1BG281800 Rh1CG298200 Rh1DG313100
rosa_wichuraiana	Rw1G028280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	394
AccB1I	GGYRCC	1 cut(s)	394
AciI	CCGC	1 cut(s)	733
AcsI	RAATTY	4 cut(s)	1063, 1097, 1204, 1360
AcuI	CTGAAG	3 cut(s)	51, 369, 480
AfaI	GTAC	3 cut(s)	343, 396, 580
AfiI	CCNNNNNNNGG	1 cut(s)	461
AjnI	CCWGG	2 cut(s)	78, 999
AjuI	GAANNNNNNNTTGG	2 cut(s)	1271, 1303
Alw26I	GTCTC	4 cut(s)	374, 445, 948, 1139
AlwNI	CAGNNNCTG	1 cut(s)	235
ApeKI	GCWGC	7 cut(s)	185, 482, 877, 880, 883, 979, 1371
ApoI	RAATTY	4 cut(s)	1063, 1097, 1204, 1360
Asp700I	GAANNNNTTC	1 cut(s)	294
Asp718I	GGTACC	1 cut(s)	394
AspLEI	GCGC	1 cut(s)	1071
AsuHPI	GGTGA	2 cut(s)	604, 880
BaeGI	GKGCMC	1 cut(s)	306
BaeI	ACNNNNGTAYC	2 cut(s)	333, 366
BanI	GGYRCC	1 cut(s)	394
BanII	GRGCYC	2 cut(s)	68, 78
BbsI	GAAGAC	1 cut(s)	230
BbvI	GCAGC	7 cut(s)	172, 494, 864, 892, 895, 991, 1383
BccI	CCATC	4 cut(s)	44, 1082, 1165, 1373
BciT130I	CCWGG	2 cut(s)	80, 1001
BcoDI	GTCTC	4 cut(s)	374, 445, 948, 1139
BfaI	CTAG	2 cut(s)	347, 815
BfmI	CTRYAG	3 cut(s)	171, 186, 878
BisI	GCNGC	7 cut(s)	186, 483, 878, 881, 884, 980, 1372
BlsI	GCNGC	7 cut(s)	187, 484, 879, 882, 885, 981, 1373
Bme1390I	CCNGG	2 cut(s)	80, 1001
BmiI	GGNNCC	3 cut(s)	84, 168, 396
BmrFI	CCNGG	2 cut(s)	80, 1001
BmsI	GCATC	2 cut(s)	778, 1105
BpiI	GAAGAC	1 cut(s)	230
BpmI	CTGGAG	2 cut(s)	54, 968
BpuEI	CTTGAG	3 cut(s)	695, 778, 1178
BsaBI	GATNNNNATC	1 cut(s)	153
BsaI	GGTCTC	1 cut(s)	445
BsaJI	CCNNGG	1 cut(s)	78
Bsc4I	CCNNNNNNNGG	1 cut(s)	461
Bse1I	ACTGG	1 cut(s)	123
Bse3DI	GCAATG	2 cut(s)	41, 1138
Bse8I	GATNNNNATC	1 cut(s)	153
BseBI	CCWGG	2 cut(s)	80, 1001
BseDI	CCNNGG	1 cut(s)	78
BseGI	GGATG	4 cut(s)	139, 727, 805, 1120
BseJI	GATNNNNATC	1 cut(s)	153
BseLI	CCNNNNNNNGG	1 cut(s)	461
BseMI	GCAATG	2 cut(s)	41, 1138
BseMII	CTCAG	6 cut(s)	159, 227, 369, 375, 483, 857
BseNI	ACTGG	1 cut(s)	123
BseRI	GAGGAG	1 cut(s)	75
BseSI	GKGCMC	1 cut(s)	306
BseXI	GCAGC	7 cut(s)	172, 494, 864, 892, 895, 991, 1383
BsgI	GTGCAG	1 cut(s)	706
BshNI	GGYRCC	1 cut(s)	394
BslFI	GGGAC	1 cut(s)	994
BslI	CCNNNNNNNGG	1 cut(s)	461
BsmAI	GTCTC	4 cut(s)	374, 445, 948, 1139
BsmFI	GGGAC	1 cut(s)	994
BsmI	GAATGC	1 cut(s)	407
Bso31I	GGTCTC	1 cut(s)	445
Bsp1286I	GDGCHC	3 cut(s)	68, 78, 306
Bsp143I	GATC	3 cut(s)	154, 1161, 1334
BspACI	CCGC	1 cut(s)	733
BspCNI	CTCAG	6 cut(s)	158, 228, 370, 374, 482, 856
BspHI	TCATGA	1 cut(s)	1397
BspLI	GGNNCC	3 cut(s)	84, 168, 396
BspMAI	CTGCAG	2 cut(s)	190, 882
BspQI	GCTCTTC	1 cut(s)	1211
BspT107I	GGYRCC	1 cut(s)	394
BspTNI	GGTCTC	1 cut(s)	445
BsrDI	GCAATG	2 cut(s)	41, 1138
BsrI	ACTGG	1 cut(s)	123
BssECI	CCNNGG	1 cut(s)	78
BssMI	GATC	3 cut(s)	154, 1161, 1334
Bst2UI	CCWGG	2 cut(s)	80, 1001
Bst4CI	ACNGT	5 cut(s)	1008, 1044, 1077, 1275, 1287
Bst6I	CTCTTC	2 cut(s)	981, 1211
BstDEI	CTNAG	6 cut(s)	145, 236, 361, 378, 469, 843
BstF5I	GGATG	4 cut(s)	139, 727, 805, 1120
BstHHI	GCGC	1 cut(s)	1071
BstKTI	GATC	3 cut(s)	157, 1164, 1337
BstMAI	GTCTC	4 cut(s)	374, 445, 948, 1139
BstMBI	GATC	3 cut(s)	154, 1161, 1334
BstMWI	GCNNNNNNNGC	3 cut(s)	352, 820, 883
BstNI	CCWGG	2 cut(s)	80, 1001
BstSCI	CCNGG	2 cut(s)	78, 999
BstSFI	CTRYAG	3 cut(s)	171, 186, 878
BstSLI	GKGCMC	1 cut(s)	306
BstV1I	GCAGC	7 cut(s)	172, 494, 864, 892, 895, 991, 1383
BstV2I	GAAGAC	1 cut(s)	230
BtsCI	GGATG	4 cut(s)	139, 727, 805, 1120
BtsI	GCAGTG	1 cut(s)	412
BtsIMutI	CAGTG	4 cut(s)	116, 291, 412, 549
CaiI	CAGNNNCTG	1 cut(s)	235
CciI	TCATGA	1 cut(s)	1397
CfoI	GCGC	1 cut(s)	1071
Csp6I	GTAC	3 cut(s)	342, 395, 579
CviAII	CATG	3 cut(s)	352, 983, 1398
CviQI	GTAC	3 cut(s)	342, 395, 579
DdeI	CTNAG	6 cut(s)	145, 236, 361, 378, 469, 843
DpnI	GATC	3 cut(s)	156, 1163, 1336
DpnII	GATC	3 cut(s)	154, 1161, 1334
DraI	TTTAAA	2 cut(s)	586, 1153
Eam1104I	CTCTTC	2 cut(s)	981, 1211
EarI	CTCTTC	2 cut(s)	981, 1211
Eco24I	GRGCYC	2 cut(s)	68, 78
Eco31I	GGTCTC	1 cut(s)	445
Eco57I	CTGAAG	3 cut(s)	51, 369, 480
EcoRI	GAATTC	1 cut(s)	1360
EcoRII	CCWGG	2 cut(s)	78, 999
EcoT22I	ATGCAT	1 cut(s)	1120
EcoT38I	GRGCYC	2 cut(s)	68, 78
FaeI	CATG	3 cut(s)	355, 986, 1401
FalI	AAGNNNNNCTT	4 cut(s)	566, 598, 1302, 1334
FaqI	GGGAC	1 cut(s)	994
FatI	CATG	3 cut(s)	351, 982, 1397
FauI	CCCGC	1 cut(s)	726
Fnu4HI	GCNGC	7 cut(s)	186, 483, 878, 881, 884, 980, 1372
FokI	GGATG	4 cut(s)	146, 734, 812, 1127
FriOI	GRGCYC	2 cut(s)	68, 78
Fsp4HI	GCNGC	7 cut(s)	186, 483, 878, 881, 884, 980, 1372
FspBI	CTAG	2 cut(s)	347, 815
GlaI	GCGC	1 cut(s)	1070
GluI	GCNGC	7 cut(s)	186, 483, 878, 881, 884, 980, 1372
GsuI	CTGGAG	2 cut(s)	54, 968
HhaI	GCGC	1 cut(s)	1071
Hin1II	CATG	3 cut(s)	355, 986, 1401
Hin6I	GCGC	1 cut(s)	1069
HinP1I	GCGC	1 cut(s)	1069
HincII	GTYRAC	2 cut(s)	741, 1080
HindII	GTYRAC	2 cut(s)	741, 1080
HindIII	AAGCTT	2 cut(s)	671, 1316
HphI	GGTGA	2 cut(s)	604, 880
Hpy166II	GTNNAC	4 cut(s)	612, 741, 1080, 1271
Hpy188III	TCNNGA	9 cut(s)	29, 71, 128, 665, 947, 1112, 1195, 1213, 1398
Hpy8I	GTNNAC	4 cut(s)	612, 741, 1080, 1271
HpyAV	CCTTC	4 cut(s)	329, 455, 487, 1192
HpyCH4III	ACNGT	5 cut(s)	1008, 1044, 1077, 1275, 1287
HpyCH4IV	ACGT	1 cut(s)	562
HpyCH4V	TGCA	8 cut(s)	188, 405, 572, 687, 791, 880, 1028, 1118
HpyF10VI	GCNNNNNNNGC	3 cut(s)	352, 820, 883
HpyF3I	CTNAG	6 cut(s)	145, 236, 361, 378, 469, 843
HpySE526I	ACGT	1 cut(s)	562
Hsp92II	CATG	3 cut(s)	355, 986, 1401
HspAI	GCGC	1 cut(s)	1069
KpnI	GGTACC	1 cut(s)	398
Kzo9I	GATC	3 cut(s)	154, 1161, 1334
LguI	GCTCTTC	1 cut(s)	1211
LmnI	GCTCC	3 cut(s)	88, 322, 949
Lsp1109I	GCAGC	7 cut(s)	172, 494, 864, 892, 895, 991, 1383
LweI	GCATC	2 cut(s)	778, 1105
MaeI	CTAG	2 cut(s)	347, 815
MaeII	ACGT	1 cut(s)	562
MaeIII	GTNAC	4 cut(s)	693, 1038, 1044, 1240
MalI	GATC	3 cut(s)	156, 1163, 1336
MboI	GATC	3 cut(s)	154, 1161, 1334
MboII	GAAGA	8 cut(s)	188, 235, 344, 842, 982, 998, 1228, 1291
MhlI	GDGCHC	3 cut(s)	68, 78, 306
MluCI	AATT	7 cut(s)	179, 957, 1063, 1097, 1106, 1204, 1360
MlyI	GAGTC	2 cut(s)	353, 686
MmeI	TCCRAC	4 cut(s)	113, 119, 1126, 1269
MnlI	CCTC	8 cut(s)	78, 96, 124, 154, 332, 403, 458, 739
Mph1103I	ATGCAT	1 cut(s)	1120
MroXI	GAANNNNTTC	1 cut(s)	294
MseI	TTAA	6 cut(s)	585, 866, 932, 975, 995, 1152
MspA1I	CMGCKG	2 cut(s)	365, 1085
MspR9I	CCNGG	2 cut(s)	80, 1001
Mva1269I	GAATGC	1 cut(s)	407
MvaI	CCWGG	2 cut(s)	80, 1001
MwoI	GCNNNNNNNGC	3 cut(s)	352, 820, 883
NdeII	GATC	3 cut(s)	154, 1161, 1334
NlaIII	CATG	3 cut(s)	355, 986, 1401
NlaIV	GGNNCC	3 cut(s)	84, 168, 396
NmuCI	GTSAC	1 cut(s)	1038
NsiI	ATGCAT	1 cut(s)	1120
PagI	TCATGA	1 cut(s)	1397
PciSI	GCTCTTC	1 cut(s)	1211
PctI	GAATGC	1 cut(s)	407
PdmI	GAANNNNTTC	1 cut(s)	294
PfeI	GAWTC	9 cut(s)	38, 290, 368, 473, 545, 647, 1303, 1322, 1385
PfoI	TCCNGGA	1 cut(s)	999
PkrI	GCNGC	7 cut(s)	187, 484, 879, 882, 885, 981, 1373
PleI	GAGTC	2 cut(s)	353, 685
PpsI	GAGTC	2 cut(s)	353, 685
Psp6I	CCWGG	2 cut(s)	78, 999
PspGI	CCWGG	2 cut(s)	78, 999
PspN4I	GGNNCC	3 cut(s)	84, 168, 396
PstI	CTGCAG	2 cut(s)	190, 882
PstNI	CAGNNNCTG	1 cut(s)	235
PvuII	CAGCTG	2 cut(s)	365, 1085
RsaI	GTAC	3 cut(s)	343, 396, 580
RsaNI	GTAC	3 cut(s)	342, 395, 579
SapI	GCTCTTC	1 cut(s)	1211
SaqAI	TTAA	6 cut(s)	585, 866, 932, 975, 995, 1152
SatI	GCNGC	7 cut(s)	186, 483, 878, 881, 884, 980, 1372
Sau3AI	GATC	3 cut(s)	154, 1161, 1334
SchI	GAGTC	2 cut(s)	353, 686
ScrFI	CCNGG	2 cut(s)	80, 1001
SduI	GDGCHC	3 cut(s)	68, 78, 306
SfaNI	GCATC	2 cut(s)	778, 1105
SfcI	CTRYAG	3 cut(s)	171, 186, 878
SmlI	CTYRAG	3 cut(s)	674, 757, 1193
SmoI	CTYRAG	3 cut(s)	674, 757, 1193
Sse9I	AATT	7 cut(s)	179, 957, 1063, 1097, 1106, 1204, 1360
SsiI	CCGC	1 cut(s)	733
SspMI	CTAG	2 cut(s)	347, 815
StyD4I	CCNGG	2 cut(s)	78, 999
TaaI	ACNGT	5 cut(s)	1008, 1044, 1077, 1275, 1287
TaiI	ACGT	1 cut(s)	565
TaqI	TCGA	2 cut(s)	664, 1164
TaqII	GACCGA	1 cut(s)	469
TasI	AATT	7 cut(s)	179, 957, 1063, 1097, 1106, 1204, 1360
TfiI	GAWTC	9 cut(s)	38, 290, 368, 473, 545, 647, 1303, 1322, 1385
Tru1I	TTAA	6 cut(s)	585, 866, 932, 975, 995, 1152
Tru9I	TTAA	6 cut(s)	585, 866, 932, 975, 995, 1152
TscAI	CASTG	4 cut(s)	123, 291, 412, 556
TseFI	GTSAC	1 cut(s)	1038
TseI	GCWGC	7 cut(s)	185, 482, 877, 880, 883, 979, 1371
Tsp45I	GTSAC	1 cut(s)	1038
TspDTI	ATGAA	7 cut(s)	30, 592, 873, 936, 999, 1031, 1149
TspGWI	ACGGA	1 cut(s)	335
TspRI	CASTG	4 cut(s)	123, 291, 412, 556
XapI	RAATTY	4 cut(s)	1063, 1097, 1204, 1360
XmnI	GAANNNNTTC	1 cut(s)	294
XspI	CTAG	2 cut(s)	347, 815
Zsp2I	ATGCAT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.