Prupe.2G216400_v2.0.a1

Amino-transferase class IV

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
24684078 .. 24691310
7233 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G216400.2

Sequence Viewer

Length: 1260 bp
ATGGCGACTTTAAGCCCCAGGTTCTTGTTCAGCAAGGGCGTCGTTTCACAGCCCGCCAACACTCCACCGGTTACAAGCTTCCTCGAAACGCATCCAGGAGCGTACACGACGTCTCGCACTCACAAAGACGCGTCGTTCGTGCTGTTCTGGGAACGACAGTTGAAGAGACTGGTGGACTCAGTAGCAATTCTATACAATTCGAATCCTCAGCTTCTGTTCGGACCCAACAAAACGACGTCGCTTTCGTTGCCGTCGCTCTCCTCCAACTCCCCTTTGCTCCAGTCAGAGGTTCGCGAGCTCGTGAATCGTTCGATGAAACGAGTGTTGCCGATTGCTTTGAATGAGAGGAGTGAGGGAGAAGAACTGTCAATTACAGCTCTGGTCAGTGGCAATTTGGAGAAATTGAGTGAGAATGAGAGTGAGGGCTTGGACCATGAAAGATTTGGCAATGGGGTTTTTGATGTGAGTATTTACATTGGGACTTATGTGCCAACTGTGTTTGGTATCGAAGGAAACGGTGCGCATTTGGCTGTGGTGGGTCGTGGGAGAGACGATGCTTCTGCTAAGTATTCGGATTGGGTGAGGATTAGGAAGTCTTTGGAGAGGTTGAGGCCTCCCAATGGGACCGAGCTCTTGTTGTCTAATGACGGTGACCGGATTCTTGAGGGGACGGTCTCAAACTTCTTTGTCGTCTGCCGGAAGGATAACGATGAAGCTAAGGGGCAAAGTGTGCACTGTTTTGAAGTACAGACAGCTCCTATTATTGATCATGTCCTTCCAGGAATTATACGCCAATTGGTCATTGAAGTATGCTTGAGCAAGGGAATCCCCTTTCGAGAAGTTGCACCATCGTGGTCAGAGAGTGAATTTTGGGCAGAGGCGTTCATTACAAGTAGCTTGAGACTTCTGCAGCACGCGGAGAGAATTAGTTTTCCAAGTTCATGGGAATCACTAAATTCTAAATCTTGGGAGGAGATCTCATGGAAAGACAAACATTTTGAGGAGGGTCCTGGGATGGTCACTACAATAATCCAGAAAGAGGTCATGGAGAAAGCAGCTTCAGAAGGCAGAAGCAGCCCTTGCAACTGGACTGGAATTCAATGCAATGAAGCTGGCAGCATTGTTGAAATAAATTTGGTGGATTCTGGCCTTGATGGAACACTCAACAGGTTTGACTTCTCTGCCTTTCCTAATCTCTCTTCTCTCAATGTCAATTACAACAGTCTTATAATAAATGCATTTTTTTTCATTTTTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

420

Amino Acids

46.58

Weight (kDa)

5.28

Isoelectric Point (pI)

39.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1229
AatII GACGTC 2 cut(s) 113, 239
Acc16I TGCGCA 1 cut(s) 522
AccII CGCG 3 cut(s) 131, 294, 917
AciI CCGC 2 cut(s) 54, 917
AcsI RAATTY 4 cut(s) 866, 955, 1095, 1132
AcuI CTGAAG 1 cut(s) 1044
AcyI GRCGYC 3 cut(s) 39, 110, 236
AfaI GTAC 2 cut(s) 104, 747
AfiI CCNNNNNNNGG 3 cut(s) 286, 620, 1039
AflIII ACRYGT 1 cut(s) 129
AgeI ACCGGT 1 cut(s) 67
AgsI TTSAA 6 cut(s) 163, 340, 743, 806, 1100, 1127
AjnI CCWGG 4 cut(s) 17, 94, 778, 1009
AleI CACNNNNGTG 1 cut(s) 850
Alw21I GWGCWC 3 cut(s) 300, 633, 735
Alw26I GTCTC 5 cut(s) 117, 160, 543, 679, 895
Alw44I GTGCAC 1 cut(s) 731
AlwNI CAGNNNCTG 1 cut(s) 214
AoxI GGCC 2 cut(s) 611, 1147
ApaLI GTGCAC 1 cut(s) 731
ApeKI GCWGC 4 cut(s) 910, 1055, 1074, 1116
ApoI RAATTY 4 cut(s) 866, 955, 1095, 1132
ArsI GACNNNNNNTTYG 6 cut(s) 119, 151, 226, 258, 980, 1012
AsiGI ACCGGT 1 cut(s) 67
AspLEI GCGC 1 cut(s) 523
AspS9I GGNCC 4 cut(s) 221, 430, 624, 1007
AsuHPI GGTGA 2 cut(s) 592, 662
AsuII TTCGAA 1 cut(s) 200
AvaII GGWCC 4 cut(s) 221, 430, 624, 1007
BaeGI GKGCMC 1 cut(s) 735
BanII GRGCYC 2 cut(s) 300, 633
BauI CACGAG 1 cut(s) 299
Bbv12I GWGCWC 3 cut(s) 300, 633, 735
BbvCI CCTCAGC 1 cut(s) 207
BbvI GCAGC 4 cut(s) 922, 1067, 1086, 1128
BccI CCATC 3 cut(s) 856, 1009, 1148
BceAI ACGGC 1 cut(s) 235
BcgI CGANNNNNNTGC 4 cut(s) 22, 56, 542, 576
BciT130I CCWGG 4 cut(s) 19, 96, 780, 1011
BclI TGATCA 1 cut(s) 766
BcoDI GTCTC 5 cut(s) 117, 160, 543, 679, 895
BfmI CTRYAG 1 cut(s) 908
BglII AGATCT 1 cut(s) 975
BisI GCNGC 4 cut(s) 911, 1056, 1075, 1117
BlsI GCNGC 4 cut(s) 912, 1057, 1076, 1118
Bme1390I CCNGG 4 cut(s) 19, 96, 780, 1011
Bme18I GGWCC 4 cut(s) 221, 430, 624, 1007
BmgT120I GGNCC 4 cut(s) 221, 430, 624, 1007
BmiI GGNNCC 3 cut(s) 223, 625, 1008
BmrFI CCNGG 4 cut(s) 19, 96, 780, 1011
BmsI GCATC 2 cut(s) 100, 544
BplI GAGNNNNNCTC 2 cut(s) 962, 994
BpmI CTGGAG 1 cut(s) 263
Bpu10I CCTNAGC 2 cut(s) 207, 717
Bpu14I TTCGAA 1 cut(s) 200
BpuEI CTTGAG 3 cut(s) 683, 835, 919
BsaHI GRCGYC 3 cut(s) 39, 110, 236
BsaI GGTCTC 1 cut(s) 679
BsaJI CCNNGG 2 cut(s) 17, 1010
BsaWI WCCGGW 2 cut(s) 67, 654
Bsc4I CCNNNNNNNGG 3 cut(s) 286, 620, 1039
Bse118I RCCGGY 1 cut(s) 67
Bse1I ACTGG 4 cut(s) 174, 280, 1091, 1096
Bse3DI GCAATG 2 cut(s) 454, 1111
BseBI CCWGG 4 cut(s) 19, 96, 780, 1011
BseDI CCNNGG 2 cut(s) 17, 1010
BseGI GGATG 2 cut(s) 91, 1020
BseLI CCNNNNNNNGG 3 cut(s) 286, 620, 1039
BseMI GCAATG 2 cut(s) 454, 1111
BseMII CTCAG 2 cut(s) 192, 221
BseNI ACTGG 4 cut(s) 174, 280, 1091, 1096
BseRI GAGGAG 4 cut(s) 250, 361, 986, 1016
BseSI GKGCMC 1 cut(s) 735
BseXI GCAGC 4 cut(s) 922, 1067, 1086, 1128
Bsh1236I CGCG 3 cut(s) 131, 294, 917
BshFI GGCC 2 cut(s) 613, 1149
BshTI ACCGGT 1 cut(s) 67
BsiHKAI GWGCWC 3 cut(s) 300, 633, 735
BsiSI CCGG 3 cut(s) 68, 655, 697
BslFI GGGAC 3 cut(s) 493, 637, 682
BslI CCNNNNNNNGG 3 cut(s) 286, 620, 1039
BsmAI GTCTC 5 cut(s) 117, 160, 543, 679, 895
BsmBI CGTCTC 2 cut(s) 117, 543
BsmFI GGGAC 3 cut(s) 493, 637, 682
BsnI GGCC 2 cut(s) 613, 1149
Bso31I GGTCTC 1 cut(s) 679
Bsp119I TTCGAA 1 cut(s) 200
Bsp1286I GDGCHC 3 cut(s) 300, 633, 735
Bsp143I GATC 2 cut(s) 766, 975
Bsp68I TCGCGA 1 cut(s) 294
BspACI CCGC 2 cut(s) 54, 917
BspANI GGCC 2 cut(s) 613, 1149
BspCNI CTCAG 2 cut(s) 191, 220
BspFNI CGCG 3 cut(s) 131, 294, 917
BspLI GGNNCC 3 cut(s) 223, 625, 1008
BspMAI CTGCAG 1 cut(s) 912
BspT104I TTCGAA 1 cut(s) 200
BspTNI GGTCTC 1 cut(s) 679
BsrDI GCAATG 2 cut(s) 454, 1111
BsrFI RCCGGY 1 cut(s) 67
BsrI ACTGG 4 cut(s) 174, 280, 1091, 1096
BssAI RCCGGY 1 cut(s) 67
BssECI CCNNGG 2 cut(s) 17, 1010
BssMI GATC 2 cut(s) 766, 975
BssNI GRCGYC 3 cut(s) 39, 110, 236
BssSI CACGAG 1 cut(s) 299
Bst2BI CACGAG 1 cut(s) 299
Bst2UI CCWGG 4 cut(s) 19, 96, 780, 1011
Bst4CI ACNGT 8 cut(s) 159, 366, 496, 518, 650, 673, 737, 1223
Bst6I CTCTTC 2 cut(s) 158, 1204
BstACI GRCGYC 3 cut(s) 39, 110, 236
BstAPI GCANNNNNTGC 2 cut(s) 730, 1080
BstBI TTCGAA 1 cut(s) 200
BstC8I GCNNGC 4 cut(s) 54, 296, 915, 1114
BstDEI CTNAG 4 cut(s) 178, 207, 564, 717
BstEII GGTNACC 1 cut(s) 650
BstF5I GGATG 2 cut(s) 91, 1020
BstFNI CGCG 3 cut(s) 131, 294, 917
BstHHI GCGC 1 cut(s) 523
BstKTI GATC 2 cut(s) 769, 978
BstMAI GTCTC 5 cut(s) 117, 160, 543, 679, 895
BstMBI GATC 2 cut(s) 766, 975
BstMWI GCNNNNNNNGC 5 cut(s) 247, 527, 730, 1074, 1080
BstNI CCWGG 4 cut(s) 19, 96, 780, 1011
BstPI GGTNACC 1 cut(s) 650
BstSCI CCNGG 4 cut(s) 17, 94, 778, 1009
BstSFI CTRYAG 1 cut(s) 908
BstSLI GKGCMC 1 cut(s) 735
BstUI CGCG 3 cut(s) 131, 294, 917
BstV1I GCAGC 4 cut(s) 922, 1067, 1086, 1128
BstX2I RGATCY 1 cut(s) 975
BstXI CCANNNNNNTGG 1 cut(s) 942
BstYI RGATCY 1 cut(s) 975
BsuRI GGCC 2 cut(s) 613, 1149
BtsCI GGATG 2 cut(s) 91, 1020
BtsIMutI CAGTG 2 cut(s) 391, 733
BtuMI TCGCGA 1 cut(s) 294
Cac8I GCNNGC 4 cut(s) 54, 296, 915, 1114
CaiI CAGNNNCTG 1 cut(s) 214
CfoI GCGC 1 cut(s) 523
Cfr10I RCCGGY 1 cut(s) 67
Cfr13I GGNCC 4 cut(s) 221, 430, 624, 1007
CseI GACGC 3 cut(s) 28, 120, 137
Csp6I GTAC 2 cut(s) 103, 746
CspAI ACCGGT 1 cut(s) 67
CviAII CATG 5 cut(s) 434, 770, 942, 981, 1045
CviQI GTAC 2 cut(s) 103, 746
DdeI CTNAG 4 cut(s) 178, 207, 564, 717
DpnI GATC 2 cut(s) 768, 977
DpnII GATC 2 cut(s) 766, 975
Eam1104I CTCTTC 2 cut(s) 158, 1204
EarI CTCTTC 2 cut(s) 158, 1204
Ecl136II GAGCTC 2 cut(s) 298, 631
Eco147I AGGCCT 1 cut(s) 613
Eco24I GRGCYC 2 cut(s) 300, 633
Eco31I GGTCTC 1 cut(s) 679
Eco47I GGWCC 4 cut(s) 221, 430, 624, 1007
Eco53kI GAGCTC 2 cut(s) 298, 631
Eco57I CTGAAG 1 cut(s) 1044
Eco91I GGTNACC 1 cut(s) 650
EcoICRI GAGCTC 2 cut(s) 298, 631
EcoO109I RGGNCCY 1 cut(s) 1007
EcoO65I GGTNACC 1 cut(s) 650
EcoRI GAATTC 1 cut(s) 1095
EcoRII CCWGG 4 cut(s) 17, 94, 778, 1009
EcoT22I ATGCAT 1 cut(s) 1240
EcoT38I GRGCYC 2 cut(s) 300, 633
Esp3I CGTCTC 2 cut(s) 117, 543
FaeI CATG 5 cut(s) 437, 773, 945, 984, 1048
FalI AAGNNNNNCTT 2 cut(s) 1063, 1095
FaqI GGGAC 3 cut(s) 493, 637, 682
FatI CATG 5 cut(s) 433, 769, 941, 980, 1044
FauI CCCGC 1 cut(s) 61
FbaI TGATCA 1 cut(s) 766
Fnu4HI GCNGC 4 cut(s) 911, 1056, 1075, 1117
FokI GGATG 2 cut(s) 78, 1027
FriOI GRGCYC 2 cut(s) 300, 633
Fsp4HI GCNGC 4 cut(s) 911, 1056, 1075, 1117
FspAI RTGCGCAY 1 cut(s) 522
FspI TGCGCA 1 cut(s) 522
GlaI GCGC 1 cut(s) 522
GluI GCNGC 4 cut(s) 911, 1056, 1075, 1117
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 2 cut(s) 613, 1149
HapII CCGG 3 cut(s) 68, 655, 697
HgaI GACGC 3 cut(s) 28, 120, 137
HhaI GCGC 1 cut(s) 523
Hin1I GRCGYC 3 cut(s) 39, 110, 236
Hin1II CATG 5 cut(s) 437, 773, 945, 984, 1048
Hin6I GCGC 1 cut(s) 521
HinP1I GCGC 1 cut(s) 521
HindIII AAGCTT 1 cut(s) 76
HinfI GANTC 7 cut(s) 176, 202, 304, 658, 825, 947, 1142
HpaII CCGG 3 cut(s) 68, 655, 697
HphI GGTGA 2 cut(s) 592, 662
Hpy166II GTNNAC 3 cut(s) 105, 175, 733
Hpy188I TCNGA 5 cut(s) 221, 286, 574, 859, 1063
Hpy188III TCNNGA 5 cut(s) 293, 301, 662, 836, 1033
Hpy8I GTNNAC 3 cut(s) 105, 175, 733
Hpy99I CGWCG 6 cut(s) 44, 112, 136, 238, 241, 256
HpyAV CCTTC 4 cut(s) 503, 694, 785, 1058
HpyCH4III ACNGT 8 cut(s) 159, 366, 496, 518, 650, 673, 737, 1223
HpyCH4IV ACGT 2 cut(s) 110, 236
HpyCH4V TGCA 6 cut(s) 733, 845, 910, 1083, 1104, 1238
HpyF10VI GCNNNNNNNGC 5 cut(s) 247, 527, 730, 1074, 1080
HpyF3I CTNAG 4 cut(s) 178, 207, 564, 717
HpySE526I ACGT 2 cut(s) 110, 236
Hsp92I GRCGYC 3 cut(s) 39, 110, 236
Hsp92II CATG 5 cut(s) 437, 773, 945, 984, 1048
HspAI GCGC 1 cut(s) 521
Ksp22I TGATCA 1 cut(s) 766
Kzo9I GATC 2 cut(s) 766, 975
LmnI GCTCC 3 cut(s) 98, 282, 760
Lsp1109I GCAGC 4 cut(s) 922, 1067, 1086, 1128
LweI GCATC 2 cut(s) 100, 544
MaeII ACGT 2 cut(s) 110, 236
MaeIII GTNAC 3 cut(s) 70, 650, 1018
MalI GATC 2 cut(s) 768, 977
MboI GATC 2 cut(s) 766, 975
MboII GAAGA 3 cut(s) 175, 371, 1191
MfeI CAATTG 1 cut(s) 794
MflI RGATCY 1 cut(s) 975
MhlI GDGCHC 3 cut(s) 300, 633, 735
MluI ACGCGT 1 cut(s) 129
MlyI GAGTC 1 cut(s) 170
MmeI TCCRAC 1 cut(s) 288
Mph1103I ATGCAT 1 cut(s) 1240
MseI TTAA 1 cut(s) 11
MslI CAYNNNNRTG 1 cut(s) 850
MspI CCGG 3 cut(s) 68, 655, 697
MspR9I CCNGG 4 cut(s) 19, 96, 780, 1011
MunI CAATTG 1 cut(s) 794
MvaI CCWGG 4 cut(s) 19, 96, 780, 1011
MvnI CGCG 3 cut(s) 131, 294, 917
MwoI GCNNNNNNNGC 5 cut(s) 247, 527, 730, 1074, 1080
NdeII GATC 2 cut(s) 766, 975
NlaIII CATG 5 cut(s) 437, 773, 945, 984, 1048
NlaIV GGNNCC 3 cut(s) 223, 625, 1008
NmuCI GTSAC 2 cut(s) 650, 1018
NruI TCGCGA 1 cut(s) 294
NsbI TGCGCA 1 cut(s) 522
NsiI ATGCAT 1 cut(s) 1240
NspV TTCGAA 1 cut(s) 200
OliI CACNNNNGTG 1 cut(s) 850
PceI AGGCCT 1 cut(s) 613
PcsI WCGNNNNNNNCGW 2 cut(s) 135, 242
PfeI GAWTC 6 cut(s) 202, 304, 658, 825, 947, 1142
PfoI TCCNGGA 2 cut(s) 94, 778
PinAI ACCGGT 1 cut(s) 67
PkrI GCNGC 4 cut(s) 912, 1057, 1076, 1118
PleI GAGTC 1 cut(s) 170
PpsI GAGTC 1 cut(s) 170
PpuMI RGGWCCY 1 cut(s) 1007
PsiI TTATAA 1 cut(s) 1229
Psp124BI GAGCTC 2 cut(s) 300, 633
Psp5II RGGWCCY 1 cut(s) 1007
Psp6I CCWGG 4 cut(s) 17, 94, 778, 1009
PspEI GGTNACC 1 cut(s) 650
PspGI CCWGG 4 cut(s) 17, 94, 778, 1009
PspN4I GGNNCC 3 cut(s) 223, 625, 1008
PspPI GGNCC 4 cut(s) 221, 430, 624, 1007
PspPPI RGGWCCY 1 cut(s) 1007
PstI CTGCAG 1 cut(s) 912
PstNI CAGNNNCTG 1 cut(s) 214
PsuI RGATCY 1 cut(s) 975
RruI TCGCGA 1 cut(s) 294
RsaI GTAC 2 cut(s) 104, 747
RsaNI GTAC 2 cut(s) 103, 746
RseI CAYNNNNRTG 1 cut(s) 850
SacI GAGCTC 2 cut(s) 300, 633
SaqAI TTAA 1 cut(s) 11
SatI GCNGC 4 cut(s) 911, 1056, 1075, 1117
Sau3AI GATC 2 cut(s) 766, 975
Sau96I GGNCC 4 cut(s) 221, 430, 624, 1007
SchI GAGTC 1 cut(s) 170
ScrFI CCNGG 4 cut(s) 19, 96, 780, 1011
SduI GDGCHC 3 cut(s) 300, 633, 735
SfaNI GCATC 2 cut(s) 100, 544
SfcI CTRYAG 1 cut(s) 908
SfuI TTCGAA 1 cut(s) 200
SinI GGWCC 4 cut(s) 221, 430, 624, 1007
SmiMI CAYNNNNRTG 1 cut(s) 850
SmlI CTYRAG 3 cut(s) 662, 814, 898
SmoI CTYRAG 3 cut(s) 662, 814, 898
SseBI AGGCCT 1 cut(s) 613
SsiI CCGC 2 cut(s) 54, 917
SstI GAGCTC 2 cut(s) 300, 633
StuI AGGCCT 1 cut(s) 613
StyD4I CCNGG 4 cut(s) 17, 94, 778, 1009
TaaI ACNGT 8 cut(s) 159, 366, 496, 518, 650, 673, 737, 1223
TaiI ACGT 2 cut(s) 113, 239
TaqI TCGA 5 cut(s) 84, 200, 311, 507, 835
TaqII GACCGA 1 cut(s) 641
TatI WGTACW 1 cut(s) 745
TfiI GAWTC 6 cut(s) 202, 304, 658, 825, 947, 1142
Tru1I TTAA 1 cut(s) 11
Tru9I TTAA 1 cut(s) 11
TscAI CASTG 2 cut(s) 391, 740
TseFI GTSAC 2 cut(s) 650, 1018
TseI GCWGC 4 cut(s) 910, 1055, 1074, 1116
Tsp45I GTSAC 2 cut(s) 650, 1018
TspDTI ATGAA 7 cut(s) 329, 450, 726, 874, 930, 1122, 1237
TspRI CASTG 2 cut(s) 391, 740
VneI GTGCAC 1 cut(s) 731
VpaK11BI GGWCC 4 cut(s) 221, 430, 624, 1007
XapI RAATTY 4 cut(s) 866, 955, 1095, 1132
XcmI CCANNNNNNNNNTGG 1 cut(s) 440
ZraI GACGTC 2 cut(s) 111, 237
Zsp2I ATGCAT 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.