PWWP domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 FvH4_7g20250 |
| malus_domestica | MD01G1112200.v1.1 MD07G1179800.v1.1 |
| prunus_persica | Prupe.2G219200_v2.0.a1 Prupe.2G219200_v2.0.a1 |
| pyrus_communis | pycom01g14070 pycom07g17330 |
| rosa_chinensis | RchiOBHm_Chr1g0364181 |
| rosa_laevigata | RLG00000027509 |
| rosa_multiflora | Rmu_co8522441.1_g000001 Rmu_sc0000071.1_g000013 Rmu_sc0000071.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00292580 |
| rosa_rugosa | Rorug01G0314200 Rorug01G0314200 Rorug01G0314300 Rorug01G0314400 |
| rosa_samantha | Rh1AG321600 Rh1BG284700 Rh1CG301100 Rh1DG316100 |
| rosa_wichuraiana | Rw1G028520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 946, 2980 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2396, 2777 |
| AciI | CCGC | 7 cut(s) | 92, 149, 1539, 2452, 3430, 3656, 3855 |
| AclI | AACGTT | 1 cut(s) | 2075 |
| AclWI | GGATC | 5 cut(s) | 279, 2291, 3032, 3092, 3804 |
| AcoI | YGGCCR | 2 cut(s) | 1707, 3016 |
| AcuI | CTGAAG | 7 cut(s) | 432, 1071, 1403, 1410, 3065, 3345, 3525 |
| AfaI | GTAC | 3 cut(s) | 37, 1619, 3050 |
| AfeI | AGCGCT | 1 cut(s) | 3784 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 93, 2396, 2458, 2533, 2777, 3403, 3404, 3429, 3799 |
| AflII | CTTAAG | 1 cut(s) | 1739 |
| AflIII | ACRYGT | 2 cut(s) | 2200, 2875 |
| AhlI | ACTAGT | 1 cut(s) | 236 |
| AjiI | CACGTC | 1 cut(s) | 2201 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2065, 2097 |
| Alw21I | GWGCWC | 4 cut(s) | 511, 1628, 2182, 2225 |
| Alw26I | GTCTC | 4 cut(s) | 1604, 1706, 2779, 2946 |
| AlwI | GGATC | 5 cut(s) | 279, 2291, 3032, 3092, 3804 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3167 |
| Aor51HI | AGCGCT | 1 cut(s) | 3784 |
| AoxI | GGCC | 6 cut(s) | 1522, 1707, 1979, 2593, 3016, 3413 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2060, 2092 |
| AseI | ATTAAT | 2 cut(s) | 2696, 3357 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1125, 2157 |
| AspLEI | GCGC | 2 cut(s) | 3573, 3785 |
| AspS9I | GGNCC | 7 cut(s) | 321, 935, 1225, 2068, 2594, 3578, 3698 |
| AsuC2I | CCSGG | 2 cut(s) | 1258, 2597 |
| AsuII | TTCGAA | 2 cut(s) | 734, 1169 |
| AvaII | GGWCC | 6 cut(s) | 321, 935, 1225, 2068, 3578, 3698 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1089, 1122 |
| BalI | TGGCCA | 1 cut(s) | 3018 |
| BanII | GRGCYC | 2 cut(s) | 511, 1628 |
| BbsI | GAAGAC | 1 cut(s) | 656 |
| Bbv12I | GWGCWC | 4 cut(s) | 511, 1628, 2182, 2225 |
| BbvCI | CCTCAGC | 1 cut(s) | 402 |
| BciVI | GTATCC | 2 cut(s) | 2921, 2974 |
| BcnI | CCSGG | 2 cut(s) | 1258, 2597 |
| BcoDI | GTCTC | 4 cut(s) | 1604, 1706, 2779, 2946 |
| BcuI | ACTAGT | 1 cut(s) | 236 |
| BfaI | CTAG | 8 cut(s) | 89, 237, 663, 887, 2097, 2216, 2720, 3627 |
| BfmI | CTRYAG | 4 cut(s) | 471, 708, 2467, 3168 |
| BfoI | RGCGCY | 2 cut(s) | 3574, 3786 |
| BfrI | CTTAAG | 1 cut(s) | 1739 |
| BfuAI | ACCTGC | 2 cut(s) | 946, 2980 |
| BfuI | GTATCC | 2 cut(s) | 2921, 2974 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1706 |
| BglII | AGATCT | 1 cut(s) | 3644 |
| BlpI | GCTNAGC | 1 cut(s) | 1761 |
| Bme18I | GGWCC | 6 cut(s) | 321, 935, 1225, 2068, 3578, 3698 |
| BmgBI | CACGTC | 1 cut(s) | 2201 |
| BmgT120I | GGNCC | 7 cut(s) | 321, 935, 1225, 2068, 2594, 3578, 3698 |
| BmiI | GGNNCC | 5 cut(s) | 322, 496, 2069, 2261, 2387 |
| BpiI | GAAGAC | 1 cut(s) | 656 |
| BpmI | CTGGAG | 4 cut(s) | 525, 1413, 3406, 3480 |
| Bpu10I | CCTNAGC | 2 cut(s) | 402, 2427 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1761 |
| Bpu14I | TTCGAA | 2 cut(s) | 734, 1169 |
| BpuEI | CTTGAG | 4 cut(s) | 769, 954, 3384, 3423 |
| BpuMI | CCSGG | 2 cut(s) | 1258, 2597 |
| BsaI | GGTCTC | 1 cut(s) | 2946 |
| BsaWI | WCCGGW | 1 cut(s) | 355 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1125, 1155, 2926, 2956 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 93, 2396, 2458, 2533, 2777, 3403, 3404, 3429, 3799 |
| Bse118I | RCCGGY | 1 cut(s) | 62 |
| Bse1I | ACTGG | 8 cut(s) | 43, 784, 902, 1036, 1430, 1701, 2334, 3763 |
| Bse3DI | GCAATG | 2 cut(s) | 937, 2028 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 93, 2396, 2458, 2533, 2777, 3403, 3404, 3429, 3799 |
| BseMI | GCAATG | 2 cut(s) | 937, 2028 |
| BseNI | ACTGG | 8 cut(s) | 43, 784, 902, 1036, 1430, 1701, 2334, 3763 |
| BseRI | GAGGAG | 1 cut(s) | 1697 |
| BseYI | CCCAGC | 7 cut(s) | 791, 1360, 2279, 2975, 3182, 3738, 3779 |
| BsgI | GTGCAG | 2 cut(s) | 554, 924 |
| BshFI | GGCC | 6 cut(s) | 1524, 1709, 1981, 2595, 3018, 3415 |
| BsiHKAI | GWGCWC | 4 cut(s) | 511, 1628, 2182, 2225 |
| BsiSI | CCGG | 4 cut(s) | 63, 356, 1257, 2597 |
| BslFI | GGGAC | 4 cut(s) | 2081, 2226, 2573, 2864 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 93, 2396, 2458, 2533, 2777, 3403, 3404, 3429, 3799 |
| BsmAI | GTCTC | 4 cut(s) | 1604, 1706, 2779, 2946 |
| BsmBI | CGTCTC | 1 cut(s) | 2779 |
| BsmFI | GGGAC | 4 cut(s) | 2081, 2226, 2573, 2864 |
| BsmI | GAATGC | 2 cut(s) | 2170, 3496 |
| BsnI | GGCC | 6 cut(s) | 1524, 1709, 1981, 2595, 3018, 3415 |
| Bso31I | GGTCTC | 1 cut(s) | 2946 |
| Bsp119I | TTCGAA | 2 cut(s) | 734, 1169 |
| Bsp1286I | GDGCHC | 4 cut(s) | 511, 1628, 2182, 2225 |
| Bsp1407I | TGTACA | 1 cut(s) | 1617 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1761 |
| Bsp19I | CCATGG | 1 cut(s) | 1973 |
| BspACI | CCGC | 7 cut(s) | 92, 149, 1539, 2452, 3430, 3656, 3855 |
| BspANI | GGCC | 6 cut(s) | 1524, 1709, 1981, 2595, 3018, 3415 |
| BspHI | TCATGA | 2 cut(s) | 1075, 3889 |
| BspLI | GGNNCC | 5 cut(s) | 322, 496, 2069, 2261, 2387 |
| BspMAI | CTGCAG | 2 cut(s) | 712, 2471 |
| BspMI | ACCTGC | 2 cut(s) | 946, 2980 |
| BspPI | GGATC | 5 cut(s) | 279, 2291, 3032, 3092, 3804 |
| BspQI | GCTCTTC | 1 cut(s) | 3321 |
| BspT104I | TTCGAA | 2 cut(s) | 734, 1169 |
| BspTI | CTTAAG | 1 cut(s) | 1739 |
| BspTNI | GGTCTC | 1 cut(s) | 2946 |
| BsrDI | GCAATG | 2 cut(s) | 937, 2028 |
| BsrFI | RCCGGY | 1 cut(s) | 62 |
| BsrGI | TGTACA | 1 cut(s) | 1617 |
| BsrI | ACTGG | 8 cut(s) | 43, 784, 902, 1036, 1430, 1701, 2334, 3763 |
| BssAI | RCCGGY | 1 cut(s) | 62 |
| BssT1I | CCWWGG | 2 cut(s) | 324, 1973 |
| Bst4CI | ACNGT | 8 cut(s) | 55, 550, 923, 2005, 2094, 2385, 2824, 2963 |
| Bst6I | CTCTTC | 7 cut(s) | 966, 1047, 1197, 1386, 1830, 2299, 3321 |
| BstAFI | CTTAAG | 1 cut(s) | 1739 |
| BstAUI | TGTACA | 1 cut(s) | 1617 |
| BstBI | TTCGAA | 2 cut(s) | 734, 1169 |
| BstDSI | CCRYGG | 3 cut(s) | 51, 1973, 3101 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2531 |
| BstH2I | RGCGCY | 2 cut(s) | 3574, 3786 |
| BstHHI | GCGC | 2 cut(s) | 3573, 3785 |
| BstMAI | GTCTC | 4 cut(s) | 1604, 1706, 2779, 2946 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1424, 1706, 3458, 3662 |
| BstNSI | RCATGY | 2 cut(s) | 74, 2879 |
| BstSFI | CTRYAG | 4 cut(s) | 471, 708, 2467, 3168 |
| BstV2I | GAAGAC | 1 cut(s) | 656 |
| BstX2I | RGATCY | 3 cut(s) | 2283, 3097, 3644 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 2270, 2492, 3008 |
| BstYI | RGATCY | 3 cut(s) | 2283, 3097, 3644 |
| BsuI | GTATCC | 2 cut(s) | 2921, 2974 |
| BsuRI | GGCC | 6 cut(s) | 1524, 1709, 1981, 2595, 3018, 3415 |
| BtgI | CCRYGG | 3 cut(s) | 51, 1973, 3101 |
| BtrI | CACGTC | 1 cut(s) | 2201 |
| BtsI | GCAGTG | 2 cut(s) | 717, 2147 |
| BveI | ACCTGC | 2 cut(s) | 946, 2980 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3167 |
| CciI | TCATGA | 2 cut(s) | 1075, 3889 |
| CfoI | GCGC | 2 cut(s) | 3573, 3785 |
| Cfr10I | RCCGGY | 1 cut(s) | 62 |
| Cfr13I | GGNCC | 7 cut(s) | 321, 935, 1225, 2068, 2594, 3578, 3698 |
| CseI | GACGC | 2 cut(s) | 1926, 3324 |
| CsiI | ACCWGGT | 1 cut(s) | 4017 |
| Csp6I | GTAC | 3 cut(s) | 36, 1618, 3049 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3196, 3231 |
| CviQI | GTAC | 3 cut(s) | 36, 1618, 3049 |
| EaeI | YGGCCR | 2 cut(s) | 1707, 3016 |
| Eam1104I | CTCTTC | 7 cut(s) | 966, 1047, 1197, 1386, 1830, 2299, 3321 |
| EarI | CTCTTC | 7 cut(s) | 966, 1047, 1197, 1386, 1830, 2299, 3321 |
| EciI | GGCGGA | 2 cut(s) | 1554, 3844 |
| Ecl136II | GAGCTC | 2 cut(s) | 509, 1626 |
| Eco130I | CCWWGG | 2 cut(s) | 324, 1973 |
| Eco24I | GRGCYC | 2 cut(s) | 511, 1628 |
| Eco31I | GGTCTC | 1 cut(s) | 2946 |
| Eco32I | GATATC | 1 cut(s) | 1639 |
| Eco47I | GGWCC | 6 cut(s) | 321, 935, 1225, 2068, 3578, 3698 |
| Eco47III | AGCGCT | 1 cut(s) | 3784 |
| Eco53kI | GAGCTC | 2 cut(s) | 509, 1626 |
| Eco57I | CTGAAG | 7 cut(s) | 432, 1071, 1403, 1410, 3065, 3345, 3525 |
| EcoICRI | GAGCTC | 2 cut(s) | 509, 1626 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2531 |
| EcoO109I | RGGNCCY | 1 cut(s) | 321 |
| EcoRI | GAATTC | 5 cut(s) | 427, 1171, 2480, 3157, 3529 |
| EcoRV | GATATC | 1 cut(s) | 1639 |
| EcoT14I | CCWWGG | 2 cut(s) | 324, 1973 |
| EcoT38I | GRGCYC | 2 cut(s) | 511, 1628 |
| ErhI | CCWWGG | 2 cut(s) | 324, 1973 |
| Esp3I | CGTCTC | 1 cut(s) | 2779 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2030, 2062 |
| FaqI | GGGAC | 4 cut(s) | 2081, 2226, 2573, 2864 |
| FauI | CCCGC | 2 cut(s) | 85, 142 |
| FriOI | GRGCYC | 2 cut(s) | 511, 1628 |
| FspBI | CTAG | 8 cut(s) | 89, 237, 663, 887, 2097, 2216, 2720, 3627 |
| GlaI | GCGC | 2 cut(s) | 3572, 3784 |
| GsaI | CCCAGC | 7 cut(s) | 795, 1364, 2283, 2979, 3186, 3742, 3783 |
| GsuI | CTGGAG | 4 cut(s) | 525, 1413, 3406, 3480 |
| HaeII | RGCGCY | 2 cut(s) | 3574, 3786 |
| HaeIII | GGCC | 6 cut(s) | 1524, 1709, 1981, 2595, 3018, 3415 |
| HapII | CCGG | 4 cut(s) | 63, 356, 1257, 2597 |
| HgaI | GACGC | 2 cut(s) | 1926, 3324 |
| HhaI | GCGC | 2 cut(s) | 3573, 3785 |
| Hin6I | GCGC | 2 cut(s) | 3571, 3783 |
| HinP1I | GCGC | 2 cut(s) | 3571, 3783 |
| HindIII | AAGCTT | 1 cut(s) | 2373 |
| HpaII | CCGG | 4 cut(s) | 63, 356, 1257, 2597 |
| Hpy166II | GTNNAC | 9 cut(s) | 51, 353, 755, 1007, 1276, 1775, 2639, 3205, 3484 |
| Hpy8I | GTNNAC | 9 cut(s) | 51, 353, 755, 1007, 1276, 1775, 2639, 3205, 3484 |
| HpyCH4III | ACNGT | 8 cut(s) | 55, 550, 923, 2005, 2094, 2385, 2824, 2963 |
| HpyCH4IV | ACGT | 2 cut(s) | 2075, 2200 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1424, 1706, 3458, 3662 |
| HpySE526I | ACGT | 2 cut(s) | 2075, 2200 |
| HspAI | GCGC | 2 cut(s) | 3571, 3783 |
| LguI | GCTCTTC | 1 cut(s) | 3321 |
| LmnI | GCTCC | 5 cut(s) | 506, 1432, 1623, 1672, 3499 |
| MabI | ACCWGGT | 1 cut(s) | 4017 |
| MaeI | CTAG | 8 cut(s) | 89, 237, 663, 887, 2097, 2216, 2720, 3627 |
| MaeII | ACGT | 2 cut(s) | 2075, 2200 |
| MfeI | CAATTG | 3 cut(s) | 2173, 2408, 3033 |
| MflI | RGATCY | 3 cut(s) | 2283, 3097, 3644 |
| MhlI | GDGCHC | 4 cut(s) | 511, 1628, 2182, 2225 |
| MlsI | TGGCCA | 1 cut(s) | 3018 |
| MluNI | TGGCCA | 1 cut(s) | 3018 |
| MlyI | GAGTC | 5 cut(s) | 56, 290, 874, 1403, 1606 |
| MmeI | TCCRAC | 5 cut(s) | 264, 2251, 2718, 2982, 3065 |
| Mox20I | TGGCCA | 1 cut(s) | 3018 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1125, 2157 |
| MscI | TGGCCA | 1 cut(s) | 3018 |
| MslI | CAYNNNNRTG | 4 cut(s) | 984, 1587, 2811, 3831 |
| Msp20I | TGGCCA | 1 cut(s) | 3018 |
| MspA1I | CMGCKG | 2 cut(s) | 476, 1364 |
| MspCI | CTTAAG | 1 cut(s) | 1739 |
| MspI | CCGG | 4 cut(s) | 63, 356, 1257, 2597 |
| MunI | CAATTG | 3 cut(s) | 2173, 2408, 3033 |
| Mva1269I | GAATGC | 2 cut(s) | 2170, 3496 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1424, 1706, 3458, 3662 |
| NciI | CCSGG | 2 cut(s) | 1258, 2597 |
| NcoI | CCATGG | 1 cut(s) | 1973 |
| NlaIV | GGNNCC | 5 cut(s) | 322, 496, 2069, 2261, 2387 |
| NmeAIII | GCCGAG | 3 cut(s) | 479, 1507, 1735 |
| NmuCI | GTSAC | 6 cut(s) | 55, 1645, 2402, 2581, 2963, 3336 |
| NspI | RCATGY | 2 cut(s) | 74, 2879 |
| NspV | TTCGAA | 2 cut(s) | 734, 1169 |
| PagI | TCATGA | 2 cut(s) | 1075, 3889 |
| PciI | ACATGT | 1 cut(s) | 2875 |
| PciSI | GCTCTTC | 1 cut(s) | 3321 |
| PctI | GAATGC | 2 cut(s) | 2170, 3496 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1125, 2157 |
| PfeI | GAWTC | 9 cut(s) | 359, 688, 736, 1094, 1247, 2294, 2321, 2714, 3590 |
| PflFI | GACNNNGTC | 2 cut(s) | 2938, 3209 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2396, 2777 |
| PfoI | TCCNGGA | 2 cut(s) | 1129, 3422 |
| PleI | GAGTC | 5 cut(s) | 55, 289, 873, 1402, 1606 |
| PpsI | GAGTC | 5 cut(s) | 55, 289, 873, 1402, 1606 |
| PpuMI | RGGWCCY | 1 cut(s) | 321 |
| PscI | ACATGT | 1 cut(s) | 2875 |
| PshBI | ATTAAT | 2 cut(s) | 2696, 3357 |
| Psp124BI | GAGCTC | 2 cut(s) | 511, 1628 |
| Psp1406I | AACGTT | 1 cut(s) | 2075 |
| Psp5II | RGGWCCY | 1 cut(s) | 321 |
| PspFI | CCCAGC | 7 cut(s) | 791, 1360, 2279, 2975, 3182, 3738, 3779 |
| PspN4I | GGNNCC | 5 cut(s) | 322, 496, 2069, 2261, 2387 |
| PspPI | GGNCC | 7 cut(s) | 321, 935, 1225, 2068, 2594, 3578, 3698 |
| PspPPI | RGGWCCY | 1 cut(s) | 321 |
| PstI | CTGCAG | 2 cut(s) | 712, 2471 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3167 |
| PsuI | RGATCY | 3 cut(s) | 2283, 3097, 3644 |
| PsyI | GACNNNGTC | 2 cut(s) | 2938, 3209 |
| PvuII | CAGCTG | 2 cut(s) | 476, 1364 |
| RsaI | GTAC | 3 cut(s) | 37, 1619, 3050 |
| RsaNI | GTAC | 3 cut(s) | 36, 1618, 3049 |
| RseI | CAYNNNNRTG | 4 cut(s) | 984, 1587, 2811, 3831 |
| SacI | GAGCTC | 2 cut(s) | 511, 1628 |
| SapI | GCTCTTC | 1 cut(s) | 3321 |
| Sau96I | GGNCC | 7 cut(s) | 321, 935, 1225, 2068, 2594, 3578, 3698 |
| SchI | GAGTC | 5 cut(s) | 56, 290, 874, 1403, 1606 |
| SduI | GDGCHC | 4 cut(s) | 511, 1628, 2182, 2225 |
| SexAI | ACCWGGT | 1 cut(s) | 4017 |
| SfcI | CTRYAG | 4 cut(s) | 471, 708, 2467, 3168 |
| SfuI | TTCGAA | 2 cut(s) | 734, 1169 |
| SinI | GGWCC | 6 cut(s) | 321, 935, 1225, 2068, 3578, 3698 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 984, 1587, 2811, 3831 |
| SmlI | CTYRAG | 5 cut(s) | 748, 969, 1739, 3399, 3438 |
| SmoI | CTYRAG | 5 cut(s) | 748, 969, 1739, 3399, 3438 |
| SpeI | ACTAGT | 1 cut(s) | 236 |
| SsiI | CCGC | 7 cut(s) | 92, 149, 1539, 2452, 3430, 3656, 3855 |
| SspMI | CTAG | 8 cut(s) | 89, 237, 663, 887, 2097, 2216, 2720, 3627 |
| SstI | GAGCTC | 2 cut(s) | 511, 1628 |
| StyI | CCWWGG | 2 cut(s) | 324, 1973 |
| TaaI | ACNGT | 8 cut(s) | 55, 550, 923, 2005, 2094, 2385, 2824, 2963 |
| TaiI | ACGT | 2 cut(s) | 2078, 2203 |
| TaqI | TCGA | 6 cut(s) | 734, 863, 1169, 1193, 2113, 2205 |
| TaqII | GACCGA | 1 cut(s) | 2085 |
| TatI | WGTACW | 1 cut(s) | 1617 |
| TfiI | GAWTC | 9 cut(s) | 359, 688, 736, 1094, 1247, 2294, 2321, 2714, 3590 |
| TseFI | GTSAC | 6 cut(s) | 55, 1645, 2402, 2581, 2963, 3336 |
| Tsp45I | GTSAC | 6 cut(s) | 55, 1645, 2402, 2581, 2963, 3336 |
| TspGWI | ACGGA | 4 cut(s) | 1166, 2803, 3118, 3744 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2938, 3209 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2396, 2777 |
| Vha464I | CTTAAG | 1 cut(s) | 1739 |
| VpaK11BI | GGWCC | 6 cut(s) | 321, 935, 1225, 2068, 3578, 3698 |
| VspI | ATTAAT | 2 cut(s) | 2696, 3357 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2531 |
| XbaI | TCTAGA | 1 cut(s) | 2719 |
| XceI | RCATGY | 2 cut(s) | 74, 2879 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1125, 2157 |
| XspI | CTAG | 8 cut(s) | 89, 237, 663, 887, 2097, 2216, 2720, 3627 |