Prupe.2G248700_v2.0.a1

Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
26428950 .. 26433060
4111 bp
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UTR
Exon/CDS
Intron
Prupe.2G248700.1

Sequence Viewer

Length: 1917 bp
ATGGCGGGGAAGACGAAGAAAAGTGAGGCAAGCAGTAGCAGCAGCAGAAACAGCAGCCGTAGCAGTAACCACAGAGGGGAAAGCGTGGTGGTCGATTATGGTAAAAACAAAAGCTCTTGCGGCTATTGCAAATCGTCTGCTCGCTCCAGTATCTCTCATGGATTGGGGACACAAAGCATTACGATCAATGACTACCAAGACCTTCTTGACCGGGGTTGGAGAAGATCTGGCTGTTTCCTTTACAAACCTGAGATGGAAAAAACATGCTGCCCTGCTTATACTATTCGTCTGAAGGCCGGTGATTTTGTTCCTTCTAAAGAGCAACTTCGGGTGTCTAGGCGAATGCAAAGGTTTTTAGAAGGTACCTTGGATTGTAAAAGACCAGTGGAGTCTGTAGAGGATCCAAATGCTTCTAAGGACACATGCAGCCATACCCATCTTGGAGTTTCAAGCTTAGCTGTGAAGGAATCCTCTTCCAATAACAATGTAGAGAAGGATGGGGAAGAAAACATTATGCGATTCTTATCCGATCAAGTTGGTAACATAGTTCATGCTTGCTCTGAAAGTGGGGAATTTCCTGACATTCAATTTCCAAAGGCTTCCGTTAAAAAGGTTTCACAAGCCAAAAGAAAGATTTTGGTCGAAGGACCAGAAGATCTCTTATACTCAACCAATATTGCTTTCCAAATAGCGGCTACTATAAAGCGGTCTCTACCAGATCAGAAGGACGGCAACCAGGGAAGATTGTCGAGGAATATTACAGATGAAAATGGGCCATCTCCAAAACTTATTGCTGAAAAGCTAGAAAGTTTCTTGAATCAGTTGGCAAAAACTTCTGGTCTGTCAGTCAGGGCTTGCAATGGACACTTAAATTTTTATTCTGCTGCAAAACATGCTTCTGCATATGAAAGTTCTCAAACTGTTAGTGTCTCTAAAGGATCTGCTGCCAGTTCTGAAAGTAAAGGGTGCAGTTTGAAAAATAGCTCTGAAAATACTCAGGTAAAGAGGCGGAGGCTCGAGATTCATTTGAAAAGGTCCAGTTTTGATTCAGAAGAGTATGCCTTGTATAGACGGTATCAAATGATGGTTCATAATGATACCCCTGATCATGTTACGGAAAGCTCATATAAGAGGTTCTTGGTTGATACTCCCTTAATATTTGTTCCTCCAACTGGTGATGGTACAGTTCCACCTTGTGGCTTTGGCTCTTTCCATCAGCAATATGTGATTGATGGAAAGCTTGTTGCAGTCGGTGTTATAGATATCCTCCCTAGATGTTTGTCAAGTAAATATTTATTCTGGGACCCAGATTTTGCCTTCCTATCACCTGGGAAGTATTCAGCACTGCAAGAAATAAATTGGGTGAAAGAGAATCAAGCCCATTGCTCCACTCTTCAGTATTATTATCTCGGTTATTACATTCACTCTTGCAGTAAGATGAGATACAAAGCAGCATATTCCCCATCTGAGCTACTCTGCCCTCTACGTTACCAGTGGGTTCCTTTTGCCATTGCTAAGCCTTTGCTTGATAGAAAGCCGTATGTTGTTCTATCGGATTTTTCCACTTTACAAGATAGAGAGTCCTTGCTGCCTCATGTTTCTGAAGATGTCATGGAAGTGCAACATGATGACATTGGGAAAGAAGACACTAATGATTTTCTTATGTATGACGATGAAGGGATGATGGAGCCTGAATATGGAAGCTCAGACAACGAACAACATCTGCCATCTGTTGATGTAGAAGATGGAGATGTCAATAACATTTTAATCGGATTGAAGGGATCTCGTGTGAAATTCAAGGATCTAAAGTTTGCTTTTCGCCCGTCGGAAAGGAGTTACTTGGAGTTCCAGCTGCGCAGATATATGAGAGTTGTAGGTGAAGCCCTGGCCGAGCGAATGGTTTATTCACTGGAGTGA

Protein Analysis

639

Amino Acids

71.74

Weight (kDa)

7.22

Isoelectric Point (pI)

52.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1856
Acc65I GGTACC 1 cut(s) 362
AccB1I GGYRCC 1 cut(s) 362
AccB7I CCANNNNNTGG 1 cut(s) 1196
AciI CCGC 5 cut(s) 5, 120, 692, 706, 1009
AclWI GGATC 5 cut(s) 395, 408, 946, 1789, 1809
AcoI YGGCCR 1 cut(s) 1887
AcsI RAATTY 3 cut(s) 572, 871, 1793
AcuI CTGAAG 3 cut(s) 311, 1379, 1623
AdeI CACNNNGTG 1 cut(s) 1196
AfaI GTAC 2 cut(s) 364, 1183
AfiI CCNNNNNNNGG 5 cut(s) 76, 691, 1172, 1196, 1697
AgsI TTSAA 7 cut(s) 450, 587, 817, 976, 1030, 1777, 1798
AjnI CCWGG 3 cut(s) 735, 1327, 1884
AjuI GAANNNNNNNTTGG 2 cut(s) 665, 697
AleI CACNNNNGTG 1 cut(s) 1912
Alw26I GTCTC 2 cut(s) 714, 934
AlwI GGATC 5 cut(s) 395, 408, 946, 1789, 1809
Ama87I CYCGRG 1 cut(s) 1016
AoxI GGCC 3 cut(s) 294, 773, 1887
ApoI RAATTY 3 cut(s) 572, 871, 1793
ArsI GACNNNNNNTTYG 2 cut(s) 1295, 1327
Asp718I GGTACC 1 cut(s) 362
AspLEI GCGC 1 cut(s) 1857
AspS9I GGNCC 4 cut(s) 647, 773, 1035, 1303
AsuC2I CCSGG 1 cut(s) 212
AsuHPI GGTGA 5 cut(s) 311, 1187, 1317, 1375, 1889
AvaI CYCGRG 1 cut(s) 1016
AvaII GGWCC 3 cut(s) 647, 1035, 1303
BamHI GGATCC 1 cut(s) 400
BanI GGYRCC 1 cut(s) 362
BauI CACGAG 1 cut(s) 1785
BbsI GAAGAC 2 cut(s) 17, 1650
BceAI ACGGC 3 cut(s) 42, 745, 1522
BciT130I CCWGG 3 cut(s) 737, 1329, 1886
BclI TGATCA 1 cut(s) 1105
BcnI CCSGG 1 cut(s) 212
BcoDI GTCTC 2 cut(s) 714, 934
BfaI CTAG 3 cut(s) 336, 803, 1272
BfmI CTRYAG 1 cut(s) 393
BglII AGATCT 2 cut(s) 224, 655
BlpI GCTNAGC 2 cut(s) 454, 1515
Bme1390I CCNGG 4 cut(s) 212, 737, 1329, 1886
Bme18I GGWCC 3 cut(s) 647, 1035, 1303
BmeT110I CYCGRG 1 cut(s) 1016
BmgT120I GGNCC 4 cut(s) 647, 773, 1035, 1303
BmiI GGNNCC 6 cut(s) 364, 402, 1304, 1305, 1500, 1689
BmrFI CCNGG 4 cut(s) 212, 737, 1329, 1886
BpiI GAAGAC 2 cut(s) 17, 1650
BpmI CTGGAG 1 cut(s) 130
Bpu1102I GCTNAGC 2 cut(s) 454, 1515
BpuMI CCSGG 1 cut(s) 212
BsaBI GATNNNNATC 1 cut(s) 523
BsaI GGTCTC 1 cut(s) 714
BsaJI CCNNGG 5 cut(s) 211, 366, 736, 1328, 1884
Bsc4I CCNNNNNNNGG 5 cut(s) 76, 691, 1172, 1196, 1697
Bse118I RCCGGY 1 cut(s) 296
Bse1I ACTGG 7 cut(s) 147, 383, 948, 1038, 1177, 1492, 1914
Bse3DI GCAATG 3 cut(s) 865, 1381, 1509
Bse8I GATNNNNATC 1 cut(s) 523
BseBI CCWGG 3 cut(s) 737, 1329, 1886
BseDI CCNNGG 5 cut(s) 211, 366, 736, 1328, 1884
BseGI GGATG 2 cut(s) 502, 1686
BseJI GATNNNNATC 1 cut(s) 523
BseLI CCNNNNNNNGG 5 cut(s) 76, 691, 1172, 1196, 1697
BseMI GCAATG 3 cut(s) 865, 1381, 1509
BseMII CTCAG 4 cut(s) 240, 1010, 1458, 1719
BseNI ACTGG 7 cut(s) 147, 383, 948, 1038, 1177, 1492, 1914
BsgI GTGCAG 1 cut(s) 988
BshFI GGCC 3 cut(s) 296, 775, 1889
BshNI GGYRCC 1 cut(s) 362
BsiHKCI CYCGRG 1 cut(s) 1016
BsiSI CCGG 2 cut(s) 211, 297
BslFI GGGAC 2 cut(s) 181, 1316
BslI CCNNNNNNNGG 5 cut(s) 76, 691, 1172, 1196, 1697
BsmAI GTCTC 2 cut(s) 714, 934
BsmFI GGGAC 2 cut(s) 181, 1316
BsmI GAATGC 1 cut(s) 348
BsnI GGCC 3 cut(s) 296, 775, 1889
Bso31I GGTCTC 1 cut(s) 714
BsoBI CYCGRG 1 cut(s) 1016
Bsp1720I GCTNAGC 2 cut(s) 454, 1515
BspACI CCGC 5 cut(s) 5, 120, 692, 706, 1009
BspANI GGCC 3 cut(s) 296, 775, 1889
BspCNI CTCAG 4 cut(s) 241, 1009, 1459, 1718
BspLI GGNNCC 6 cut(s) 364, 402, 1304, 1305, 1500, 1689
BspPI GGATC 5 cut(s) 395, 408, 946, 1789, 1809
BspT107I GGYRCC 1 cut(s) 362
BspTNI GGTCTC 1 cut(s) 714
BsrDI GCAATG 3 cut(s) 865, 1381, 1509
BsrFI RCCGGY 1 cut(s) 296
BsrI ACTGG 7 cut(s) 147, 383, 948, 1038, 1177, 1492, 1914
BssAI RCCGGY 1 cut(s) 296
BssECI CCNNGG 5 cut(s) 211, 366, 736, 1328, 1884
BssSI CACGAG 1 cut(s) 1785
BssT1I CCWWGG 1 cut(s) 366
Bst2BI CACGAG 1 cut(s) 1785
Bst2UI CCWGG 3 cut(s) 737, 1329, 1886
Bst4CI ACNGT 3 cut(s) 922, 1074, 1186
Bst6I CTCTTC 3 cut(s) 478, 1047, 1398
BstAPI GCANNNNNTGC 1 cut(s) 893
BstC8I GCNNGC 4 cut(s) 31, 142, 556, 856
BstDEI CTNAG 7 cut(s) 249, 414, 454, 996, 1467, 1515, 1705
BstF5I GGATG 2 cut(s) 502, 1686
BstHHI GCGC 1 cut(s) 1857
BstMAI GTCTC 2 cut(s) 714, 934
BstMWI GCNNNNNNNGC 6 cut(s) 39, 51, 60, 120, 126, 893
BstNI CCWGG 3 cut(s) 737, 1329, 1886
BstNSI RCATGY 3 cut(s) 267, 426, 896
BstSCI CCNGG 4 cut(s) 210, 735, 1327, 1884
BstSFI CTRYAG 1 cut(s) 393
BstV2I GAAGAC 2 cut(s) 17, 1650
BstX2I RGATCY 6 cut(s) 224, 400, 655, 938, 1781, 1801
BstYI RGATCY 6 cut(s) 224, 400, 655, 938, 1781, 1801
BsuRI GGCC 3 cut(s) 296, 775, 1889
BtsCI GGATG 2 cut(s) 502, 1686
BtsI GCAGTG 1 cut(s) 1343
BtsIMutI CAGTG 4 cut(s) 390, 1343, 1499, 1907
Cac8I GCNNGC 4 cut(s) 31, 142, 556, 856
CfoI GCGC 1 cut(s) 1857
Cfr10I RCCGGY 1 cut(s) 296
Cfr13I GGNCC 4 cut(s) 647, 773, 1035, 1303
Csp6I GTAC 2 cut(s) 363, 1182
CviAII CATG 9 cut(s) 158, 264, 423, 551, 893, 1109, 1595, 1612, 1625
CviQI GTAC 2 cut(s) 363, 1182
DdeI CTNAG 7 cut(s) 249, 414, 454, 996, 1467, 1515, 1705
DraIII CACNNNGTG 1 cut(s) 1196
EaeI YGGCCR 1 cut(s) 1887
Eam1104I CTCTTC 3 cut(s) 478, 1047, 1398
EarI CTCTTC 3 cut(s) 478, 1047, 1398
EciI GGCGGA 1 cut(s) 1024
Eco130I CCWWGG 1 cut(s) 366
Eco31I GGTCTC 1 cut(s) 714
Eco32I GATATC 1 cut(s) 1264
Eco47I GGWCC 3 cut(s) 647, 1035, 1303
Eco57I CTGAAG 3 cut(s) 311, 1379, 1623
Eco88I CYCGRG 1 cut(s) 1016
EcoO109I RGGNCCY 1 cut(s) 1303
EcoRII CCWGG 3 cut(s) 735, 1327, 1884
EcoRV GATATC 1 cut(s) 1264
EcoT14I CCWWGG 1 cut(s) 366
ErhI CCWWGG 1 cut(s) 366
FaeI CATG 9 cut(s) 161, 267, 426, 554, 896, 1112, 1598, 1615, 1628
FalI AAGNNNNNCTT 6 cut(s) 189, 221, 309, 341, 1121, 1153
FaqI GGGAC 2 cut(s) 181, 1316
FatI CATG 9 cut(s) 157, 263, 422, 550, 892, 1108, 1594, 1611, 1624
FauNDI CATATG 1 cut(s) 904
FbaI TGATCA 1 cut(s) 1105
FokI GGATG 2 cut(s) 509, 1693
FspBI CTAG 3 cut(s) 336, 803, 1272
FspI TGCGCA 1 cut(s) 1856
GlaI GCGC 1 cut(s) 1856
GsuI CTGGAG 1 cut(s) 130
HaeIII GGCC 3 cut(s) 296, 775, 1889
HapII CCGG 2 cut(s) 211, 297
HhaI GCGC 1 cut(s) 1857
Hin1II CATG 9 cut(s) 161, 267, 426, 554, 896, 1112, 1598, 1615, 1628
Hin6I GCGC 1 cut(s) 1855
HinP1I GCGC 1 cut(s) 1855
HindIII AAGCTT 2 cut(s) 451, 1238
HinfI GANTC 8 cut(s) 389, 467, 519, 817, 1021, 1046, 1372, 1580
HpaII CCGG 2 cut(s) 211, 297
HphI GGTGA 5 cut(s) 311, 1187, 1317, 1375, 1889
Hpy188III TCNNGA 4 cut(s) 206, 578, 814, 1018
Hpy99I CGWCG 1 cut(s) 1828
HpyCH4III ACNGT 3 cut(s) 922, 1074, 1186
HpyCH4IV ACGT 1 cut(s) 1486
HpyF10VI GCNNNNNNNGC 6 cut(s) 39, 51, 60, 120, 126, 893
HpyF3I CTNAG 7 cut(s) 249, 414, 454, 996, 1467, 1515, 1705
HpySE526I ACGT 1 cut(s) 1486
Hsp92II CATG 9 cut(s) 161, 267, 426, 554, 896, 1112, 1598, 1615, 1628
HspAI GCGC 1 cut(s) 1855
KflI GGGWCCC 1 cut(s) 1303
KpnI GGTACC 1 cut(s) 366
Ksp22I TGATCA 1 cut(s) 1105
LmnI GCTCC 3 cut(s) 149, 1391, 1687
MaeI CTAG 3 cut(s) 336, 803, 1272
MaeII ACGT 1 cut(s) 1486
MaeIII GTNAC 5 cut(s) 65, 539, 1111, 1487, 1835
MflI RGATCY 6 cut(s) 224, 400, 655, 938, 1781, 1801
MluCI AATT 5 cut(s) 572, 587, 871, 1357, 1793
MlyI GAGTC 2 cut(s) 398, 1589
MmeI TCCRAC 3 cut(s) 197, 1193, 1806
MseI TTAA 4 cut(s) 606, 869, 1154, 1766
MslI CAYNNNNRTG 2 cut(s) 1616, 1912
MspA1I CMGCKG 1 cut(s) 1852
MspI CCGG 2 cut(s) 211, 297
MspR9I CCNGG 4 cut(s) 212, 737, 1329, 1886
Mva1269I GAATGC 1 cut(s) 348
MvaI CCWGG 3 cut(s) 737, 1329, 1886
MwoI GCNNNNNNNGC 6 cut(s) 39, 51, 60, 120, 126, 893
NciI CCSGG 1 cut(s) 212
NdeI CATATG 1 cut(s) 904
NlaIII CATG 9 cut(s) 161, 267, 426, 554, 896, 1112, 1598, 1615, 1628
NlaIV GGNNCC 6 cut(s) 364, 402, 1304, 1305, 1500, 1689
NmeAIII GCCGAG 1 cut(s) 1915
NsbI TGCGCA 1 cut(s) 1856
NspI RCATGY 3 cut(s) 267, 426, 896
OliI CACNNNNGTG 1 cut(s) 1912
PaeR7I CTCGAG 1 cut(s) 1016
PctI GAATGC 1 cut(s) 348
PfeI GAWTC 6 cut(s) 467, 519, 817, 1021, 1046, 1372
PflMI CCANNNNNTGG 1 cut(s) 1196
PleI GAGTC 2 cut(s) 397, 1588
PpsI GAGTC 2 cut(s) 397, 1588
PpuMI RGGWCCY 1 cut(s) 1303
Psp5II RGGWCCY 1 cut(s) 1303
Psp6I CCWGG 3 cut(s) 735, 1327, 1884
PspGI CCWGG 3 cut(s) 735, 1327, 1884
PspN4I GGNNCC 6 cut(s) 364, 402, 1304, 1305, 1500, 1689
PspPI GGNCC 4 cut(s) 647, 773, 1035, 1303
PspPPI RGGWCCY 1 cut(s) 1303
PsuI RGATCY 6 cut(s) 224, 400, 655, 938, 1781, 1801
PvuII CAGCTG 1 cut(s) 1852
RsaI GTAC 2 cut(s) 364, 1183
RsaNI GTAC 2 cut(s) 363, 1182
RseI CAYNNNNRTG 2 cut(s) 1616, 1912
SaqAI TTAA 4 cut(s) 606, 869, 1154, 1766
Sau96I GGNCC 4 cut(s) 647, 773, 1035, 1303
SchI GAGTC 2 cut(s) 398, 1589
ScrFI CCNGG 4 cut(s) 212, 737, 1329, 1886
SfcI CTRYAG 1 cut(s) 393
Sfr274I CTCGAG 1 cut(s) 1016
SinI GGWCC 3 cut(s) 647, 1035, 1303
SlaI CTCGAG 1 cut(s) 1016
SmiMI CAYNNNNRTG 2 cut(s) 1616, 1912
SmlI CTYRAG 1 cut(s) 1016
SmoI CTYRAG 1 cut(s) 1016
Sse9I AATT 5 cut(s) 572, 587, 871, 1357, 1793
SsiI CCGC 5 cut(s) 5, 120, 692, 706, 1009
SspI AATATT 4 cut(s) 676, 757, 1158, 1292
SspMI CTAG 3 cut(s) 336, 803, 1272
StyD4I CCNGG 4 cut(s) 210, 735, 1327, 1884
StyI CCWWGG 1 cut(s) 366
TaaI ACNGT 3 cut(s) 922, 1074, 1186
TaiI ACGT 1 cut(s) 1489
TaqI TCGA 4 cut(s) 93, 642, 749, 1017
TasI AATT 5 cut(s) 572, 587, 871, 1357, 1793
TauI GCSGC 2 cut(s) 123, 695
TfiI GAWTC 6 cut(s) 467, 519, 817, 1021, 1046, 1372
Tru1I TTAA 4 cut(s) 606, 869, 1154, 1766
Tru9I TTAA 4 cut(s) 606, 869, 1154, 1766
TscAI CASTG 4 cut(s) 390, 1350, 1499, 1914
TspDTI ATGAA 6 cut(s) 539, 780, 921, 1013, 1079, 1689
TspGWI ACGGA 2 cut(s) 592, 1130
TspRI CASTG 4 cut(s) 390, 1350, 1499, 1914
Van91I CCANNNNNTGG 1 cut(s) 1196
VpaK11BI GGWCC 3 cut(s) 647, 1035, 1303
XapI RAATTY 3 cut(s) 572, 871, 1793
XceI RCATGY 3 cut(s) 267, 426, 896
XcmI CCANNNNNNNNNTGG 1 cut(s) 437
XhoI CTCGAG 1 cut(s) 1016
XspI CTAG 3 cut(s) 336, 803, 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.