Rmu_sc0005056.1_g000016

Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005056.1
Physical Location & Seq
Reverse (-)
83165 .. 85510
2346 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005056.1_g000016.1.cds

Sequence Viewer

Length: 1644 bp
atggaaaaaacgtgctgccctgcttatactattcgcttgaaagctgatgattttgttgcttcgaaagagcagcttcgggtgactagacgaatgcagaggtttttagatggtgccttggaatgtaaacggccaggggagtctacagagggtccaaatgcttccaaggatacacgtggccagaccccccttggagtttcaagctcagctcccaacaacagtggagagaaagatggggaagagaaaattatgaattacttgtcagatcaagttgataaagcaattcgttcatgctcagaaagaggggagcttcctgacattcaatctcctaaagcttctgttaaaaaggttttgcaagccaaaagaaagctattagctgaagggtctgaagatctcttatactccagcaatattgcatttcaactagcagctgctataagacggtgtctaccagaatataaggaatcccacaagggaagacaatcgggacacattgcagaggagaatgggttgtctccaaaactcattgctgagaagctagaaagttcattaaatcagttggggaacgcttctggtctatcagtaaaggcttgcaatggacacttaaatttttattctgccacgaaacctgctccctcacatggaagtgctcaaatcattagcaactccaacagatctgcttccatgtcggaaagtaaaggctgctgtttgaaaaataactctgaatgtactcaggtgaagaggcggaggcttgagattcgtcttaaaaggtccagttttgattcagaagagtatgccttatatagaagatatcaaatgatggtgcataatgatacccctgcccatgttgcagaaggctcatataggaggttcttagttgatactcccttaatatatattcccccaactaatgatggtacagttcccccatgtggctttggctctttccatcagcaatatgtaattgatggcaaacttgttgcagttggtgttatagacattcttcctaaatgcttgtccagtaaatatttattctgggatccagactttgcgttcctatcactagggaagtattcagcactgcaagaaataaattgggtgaaagagaatcaactccattgccccactcttcaatattattatcttggttactacatccactcctgcagtaagatgagatataaggcagcgtatcgcccgtccgagctactgtgccctcttcgttaccggtgggttccttttgatatttccaagcctttgcttgatagagacaagtatgctgttttatcagattgtaccatctctcaagatagggactcctcatcactcgatgtttctgaagatgtcatgggaatacaacatgatgacattggccaagatagtgaggtaagaatgtatgatgaagggatgattgagcctgaatatgaaagctctgacaatcaaccacatctggcatatgttgatgtggaaaatggagatgccggtaacgttttaatcgggttgaacggttctcgtgtgagattcaaggatataaagcaagcttttggtcccacagaactaagttacttggaatcccagttgagtagatacacagaagttgtaggtgaagagctcgctgaacgaatggtttattcaattgagccctaa

Protein Analysis

547

Amino Acids

61.41

Weight (kDa)

6.08

Isoelectric Point (pI)

55.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 634
AccB1I GGYRCC 1 cut(s) 110
AccI GTMKAC 2 cut(s) 140, 445
AciI CCGC 1 cut(s) 742
AclI AACGTT 1 cut(s) 1485
AclWI GGATC 2 cut(s) 1031, 1044
AcoI YGGCCR 3 cut(s) 128, 175, 1369
AcsI RAATTY 1 cut(s) 604
AcuI CTGAAG 3 cut(s) 396, 405, 1356
AcvI CACGTG 1 cut(s) 173
AfaI GTAC 3 cut(s) 727, 916, 1294
AfiI CCNNNNNNNGG 2 cut(s) 638, 929
AflIII ACRYGT 1 cut(s) 170
AgeI ACCGGT 1 cut(s) 1224
AgsI TTSAA 9 cut(s) 40, 198, 320, 419, 709, 1130, 1501, 1522, 1632
AjnI CCWGG 1 cut(s) 130
Alw21I GWGCWC 2 cut(s) 649, 1611
Alw26I GTCTC 2 cut(s) 516, 1260
AlwI GGATC 2 cut(s) 1031, 1044
AoxI GGCC 3 cut(s) 128, 175, 1369
ApeKI GCWGC 6 cut(s) 15, 70, 425, 428, 699, 1184
ApoI RAATTY 1 cut(s) 604
AsiGI ACCGGT 1 cut(s) 1224
AspS9I GGNCC 3 cut(s) 149, 768, 1544
AsuHPI GGTGA 4 cut(s) 91, 745, 1108, 1613
AsuII TTCGAA 1 cut(s) 62
AvaII GGWCC 3 cut(s) 149, 768, 1544
BaeGI GKGCMC 1 cut(s) 1214
BalI TGGCCA 2 cut(s) 177, 1371
BamHI GGATCC 1 cut(s) 1036
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 2 cut(s) 1611, 1641
BauI CACGAG 1 cut(s) 1509
BbrPI CACGTG 1 cut(s) 173
BbsI GAAGAC 1 cut(s) 481
Bbv12I GWGCWC 2 cut(s) 649, 1611
BbvI GCAGC 6 cut(s) 2, 82, 415, 437, 686, 1196
BccI CCATC 7 cut(s) 101, 224, 811, 905, 954, 959, 1304
BceAI ACGGC 1 cut(s) 143
BciT130I CCWGG 1 cut(s) 132
BciVI GTATCC 1 cut(s) 160
BcoDI GTCTC 2 cut(s) 516, 1260
BfaI CTAG 4 cut(s) 84, 422, 536, 1061
BfmI CTRYAG 2 cut(s) 141, 1162
BfuAI ACCTGC 1 cut(s) 634
BfuI GTATCC 1 cut(s) 160
BglII AGATCT 2 cut(s) 388, 671
BisI GCNGC 6 cut(s) 16, 71, 426, 429, 700, 1185
BlpI GCTNAGC 1 cut(s) 202
BlsI GCNGC 6 cut(s) 17, 72, 427, 430, 701, 1186
Bme1390I CCNGG 1 cut(s) 132
Bme18I GGWCC 3 cut(s) 149, 768, 1544
BmgT120I GGNCC 3 cut(s) 149, 768, 1544
BmiI GGNNCC 5 cut(s) 112, 150, 1038, 1233, 1546
BmrFI CCNGG 1 cut(s) 132
BmrI ACTGGG 1 cut(s) 1567
BmsI GCATC 1 cut(s) 1465
BmuI ACTGGG 1 cut(s) 1567
BpiI GAAGAC 1 cut(s) 481
BpmI CTGGAG 1 cut(s) 385
Bpu1102I GCTNAGC 1 cut(s) 202
Bpu14I TTCGAA 1 cut(s) 62
BpuEI CTTGAG 2 cut(s) 770, 1287
BsaAI YACGTR 1 cut(s) 173
BsaJI CCNNGG 4 cut(s) 114, 131, 162, 187
BsaWI WCCGGW 1 cut(s) 1224
BsaXI ACNNNNNCTCC 4 cut(s) 491, 521, 1142, 1172
Bsc4I CCNNNNNNNGG 2 cut(s) 638, 929
Bse118I RCCGGY 2 cut(s) 1224, 1478
Bse1I ACTGG 3 cut(s) 771, 1017, 1573
Bse3DI GCAATG 4 cut(s) 489, 522, 598, 1114
BseBI CCWGG 1 cut(s) 132
BseDI CCNNGG 4 cut(s) 114, 131, 162, 187
BseGI GGATG 2 cut(s) 1152, 1410
BseLI CCNNNNNNNGG 2 cut(s) 638, 929
BseMI GCAATG 4 cut(s) 489, 522, 598, 1114
BseMII CTCAG 4 cut(s) 216, 306, 519, 743
BseNI ACTGG 3 cut(s) 771, 1017, 1573
BseRI GAGGAG 2 cut(s) 512, 1306
BseSI GKGCMC 1 cut(s) 1214
BseXI GCAGC 6 cut(s) 2, 82, 415, 437, 686, 1196
BshFI GGCC 3 cut(s) 130, 177, 1371
BshNI GGYRCC 1 cut(s) 110
BshTI ACCGGT 1 cut(s) 1224
BsiHKAI GWGCWC 2 cut(s) 649, 1611
BsiSI CCGG 2 cut(s) 1225, 1479
BslFI GGGAC 3 cut(s) 498, 1325, 1530
BslI CCNNNNNNNGG 2 cut(s) 638, 929
BsmAI GTCTC 2 cut(s) 516, 1260
BsmFI GGGAC 3 cut(s) 498, 1325, 1530
BsmI GAATGC 1 cut(s) 96
BsnI GGCC 3 cut(s) 130, 177, 1371
Bsp119I TTCGAA 1 cut(s) 62
Bsp1286I GDGCHC 4 cut(s) 649, 1214, 1611, 1641
Bsp143I GATC 4 cut(s) 262, 388, 671, 1036
Bsp1720I GCTNAGC 1 cut(s) 202
BspACI CCGC 1 cut(s) 742
BspANI GGCC 3 cut(s) 130, 177, 1371
BspCNI CTCAG 4 cut(s) 215, 305, 520, 742
BspLI GGNNCC 5 cut(s) 112, 150, 1038, 1233, 1546
BspMAI CTGCAG 1 cut(s) 1166
BspMI ACCTGC 1 cut(s) 634
BspPI GGATC 2 cut(s) 1031, 1044
BspQI GCTCTTC 1 cut(s) 1599
BspT104I TTCGAA 1 cut(s) 62
BspT107I GGYRCC 1 cut(s) 110
BsrDI GCAATG 4 cut(s) 489, 522, 598, 1114
BsrFI RCCGGY 2 cut(s) 1224, 1478
BsrI ACTGG 3 cut(s) 771, 1017, 1573
BssAI RCCGGY 2 cut(s) 1224, 1478
BssECI CCNNGG 4 cut(s) 114, 131, 162, 187
BssMI GATC 4 cut(s) 262, 388, 671, 1036
BssSI CACGAG 1 cut(s) 1509
BssT1I CCWWGG 3 cut(s) 114, 162, 187
Bst2BI CACGAG 1 cut(s) 1509
Bst2UI CCWGG 1 cut(s) 132
Bst4CI ACNGT 5 cut(s) 218, 441, 919, 1209, 1505
Bst6I CTCTTC 6 cut(s) 231, 731, 780, 1131, 1221, 1599
BstBAI YACGTR 1 cut(s) 173
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 4 cut(s) 354, 589, 1536, 1611
BstDEI CTNAG 6 cut(s) 202, 292, 528, 729, 871, 1556
BstF5I GGATG 2 cut(s) 1152, 1410
BstKTI GATC 4 cut(s) 265, 391, 674, 1039
BstMAI GTCTC 2 cut(s) 516, 1260
BstMBI GATC 4 cut(s) 262, 388, 671, 1036
BstMWI GCNNNNNNNGC 1 cut(s) 845
BstNI CCWGG 1 cut(s) 132
BstSCI CCNGG 1 cut(s) 130
BstSFI CTRYAG 2 cut(s) 141, 1162
BstSLI GKGCMC 1 cut(s) 1214
BstV1I GCAGC 6 cut(s) 2, 82, 415, 437, 686, 1196
BstV2I GAAGAC 1 cut(s) 481
BstX2I RGATCY 3 cut(s) 388, 671, 1036
BstYI RGATCY 3 cut(s) 388, 671, 1036
BsuI GTATCC 1 cut(s) 160
BsuRI GGCC 3 cut(s) 130, 177, 1371
BtsCI GGATG 2 cut(s) 1152, 1410
BtsI GCAGTG 1 cut(s) 1076
BtsIMutI CAGTG 2 cut(s) 223, 1076
BveI ACCTGC 1 cut(s) 634
Cac8I GCNNGC 4 cut(s) 354, 589, 1536, 1611
Cfr10I RCCGGY 2 cut(s) 1224, 1478
Cfr13I GGNCC 3 cut(s) 149, 768, 1544
Csp6I GTAC 3 cut(s) 726, 915, 1293
CspAI ACCGGT 1 cut(s) 1224
CspCI CAANNNNNGTGG 2 cut(s) 199, 234
CviAII CATG 7 cut(s) 288, 638, 682, 842, 927, 1345, 1358
CviQI GTAC 3 cut(s) 726, 915, 1293
DdeI CTNAG 6 cut(s) 202, 292, 528, 729, 871, 1556
DpnI GATC 4 cut(s) 264, 390, 673, 1038
DpnII GATC 4 cut(s) 262, 388, 671, 1036
EaeI YGGCCR 3 cut(s) 128, 175, 1369
Eam1104I CTCTTC 6 cut(s) 231, 731, 780, 1131, 1221, 1599
EarI CTCTTC 6 cut(s) 231, 731, 780, 1131, 1221, 1599
EciI GGCGGA 1 cut(s) 757
Ecl136II GAGCTC 1 cut(s) 1609
Eco130I CCWWGG 3 cut(s) 114, 162, 187
Eco24I GRGCYC 2 cut(s) 1611, 1641
Eco32I GATATC 1 cut(s) 809
Eco47I GGWCC 3 cut(s) 149, 768, 1544
Eco53kI GAGCTC 1 cut(s) 1609
Eco57I CTGAAG 3 cut(s) 396, 405, 1356
Eco72I CACGTG 1 cut(s) 173
EcoICRI GAGCTC 1 cut(s) 1609
EcoRII CCWGG 1 cut(s) 130
EcoRV GATATC 1 cut(s) 809
EcoT14I CCWWGG 3 cut(s) 114, 162, 187
EcoT38I GRGCYC 2 cut(s) 1611, 1641
ErhI CCWWGG 3 cut(s) 114, 162, 187
FaeI CATG 7 cut(s) 291, 641, 685, 845, 930, 1348, 1361
FalI AAGNNNNNCTT 2 cut(s) 57, 89
FaqI GGGAC 3 cut(s) 498, 1325, 1530
FatI CATG 7 cut(s) 287, 637, 681, 841, 926, 1344, 1357
FauNDI CATATG 1 cut(s) 1453
FblI GTMKAC 2 cut(s) 140, 445
Fnu4HI GCNGC 6 cut(s) 16, 71, 426, 429, 700, 1185
FokI GGATG 2 cut(s) 1139, 1417
FriOI GRGCYC 2 cut(s) 1611, 1641
Fsp4HI GCNGC 6 cut(s) 16, 71, 426, 429, 700, 1185
FspBI CTAG 4 cut(s) 84, 422, 536, 1061
GluI GCNGC 6 cut(s) 16, 71, 426, 429, 700, 1185
GsuI CTGGAG 1 cut(s) 385
HaeIII GGCC 3 cut(s) 130, 177, 1371
HapII CCGG 2 cut(s) 1225, 1479
Hin1II CATG 7 cut(s) 291, 641, 685, 845, 930, 1348, 1361
HindIII AAGCTT 2 cut(s) 330, 1536
HinfI GANTC 8 cut(s) 137, 461, 754, 779, 1105, 1313, 1518, 1568
HpaII CCGG 2 cut(s) 1225, 1479
HphI GGTGA 4 cut(s) 91, 745, 1108, 1613
Hpy166II GTNNAC 3 cut(s) 125, 141, 446
Hpy188III TCNNGA 4 cut(s) 311, 483, 1040, 1304
Hpy8I GTNNAC 3 cut(s) 125, 141, 446
HpyAV CCTTC 3 cut(s) 371, 845, 1394
HpyCH4III ACNGT 5 cut(s) 218, 441, 919, 1209, 1505
HpyCH4IV ACGT 3 cut(s) 11, 172, 1485
HpyF10VI GCNNNNNNNGC 1 cut(s) 845
HpyF3I CTNAG 6 cut(s) 202, 292, 528, 729, 871, 1556
HpySE526I ACGT 3 cut(s) 11, 172, 1485
Hsp92II CATG 7 cut(s) 291, 641, 685, 845, 930, 1348, 1361
Kzo9I GATC 4 cut(s) 262, 388, 671, 1036
LguI GCTCTTC 1 cut(s) 1599
LmnI GCTCC 3 cut(s) 211, 304, 634
Lsp1109I GCAGC 6 cut(s) 2, 82, 415, 437, 686, 1196
LweI GCATC 1 cut(s) 1465
MaeI CTAG 4 cut(s) 84, 422, 536, 1061
MaeII ACGT 3 cut(s) 11, 172, 1485
MaeIII GTNAC 5 cut(s) 79, 1145, 1220, 1481, 1559
MalI GATC 4 cut(s) 264, 390, 673, 1038
MboI GATC 4 cut(s) 262, 388, 671, 1036
MfeI CAATTG 1 cut(s) 1632
MflI RGATCY 3 cut(s) 388, 671, 1036
MhlI GDGCHC 4 cut(s) 649, 1214, 1611, 1641
MlsI TGGCCA 2 cut(s) 177, 1371
MluCI AATT 7 cut(s) 243, 250, 279, 604, 960, 1090, 1632
MluNI TGGCCA 2 cut(s) 177, 1371
MlyI GAGTC 2 cut(s) 146, 1307
MmeI TCCRAC 2 cut(s) 666, 690
Mox20I TGGCCA 2 cut(s) 177, 1371
MscI TGGCCA 2 cut(s) 177, 1371
MseI TTAA 6 cut(s) 339, 548, 602, 762, 887, 1490
MslI CAYNNNNRTG 1 cut(s) 642
Msp20I TGGCCA 2 cut(s) 177, 1371
MspA1I CMGCKG 1 cut(s) 428
MspI CCGG 2 cut(s) 1225, 1479
MspR9I CCNGG 1 cut(s) 132
MunI CAATTG 1 cut(s) 1632
Mva1269I GAATGC 1 cut(s) 96
MvaI CCWGG 1 cut(s) 132
MwoI GCNNNNNNNGC 1 cut(s) 845
NdeI CATATG 1 cut(s) 1453
NdeII GATC 4 cut(s) 262, 388, 671, 1036
NlaIII CATG 7 cut(s) 291, 641, 685, 845, 930, 1348, 1361
NlaIV GGNNCC 5 cut(s) 112, 150, 1038, 1233, 1546
NmuCI GTSAC 1 cut(s) 79
NspV TTCGAA 1 cut(s) 62
PciSI GCTCTTC 1 cut(s) 1599
PctI GAATGC 1 cut(s) 96
PfeI GAWTC 6 cut(s) 461, 754, 779, 1105, 1518, 1568
PflFI GACNNNGTC 1 cut(s) 441
PinAI ACCGGT 1 cut(s) 1224
PkrI GCNGC 6 cut(s) 17, 72, 427, 430, 701, 1186
PleI GAGTC 2 cut(s) 145, 1307
PmaCI CACGTG 1 cut(s) 173
PmlI CACGTG 1 cut(s) 173
PpsI GAGTC 2 cut(s) 145, 1307
Ppu21I YACGTR 1 cut(s) 173
Psp124BI GAGCTC 1 cut(s) 1611
Psp1406I AACGTT 1 cut(s) 1485
Psp6I CCWGG 1 cut(s) 130
PspCI CACGTG 1 cut(s) 173
PspGI CCWGG 1 cut(s) 130
PspN4I GGNNCC 5 cut(s) 112, 150, 1038, 1233, 1546
PspPI GGNCC 3 cut(s) 149, 768, 1544
PstI CTGCAG 1 cut(s) 1166
PsuI RGATCY 3 cut(s) 388, 671, 1036
PsyI GACNNNGTC 1 cut(s) 441
PvuII CAGCTG 1 cut(s) 428
RsaI GTAC 3 cut(s) 727, 916, 1294
RsaNI GTAC 3 cut(s) 726, 915, 1293
RseI CAYNNNNRTG 1 cut(s) 642
SacI GAGCTC 1 cut(s) 1611
SapI GCTCTTC 1 cut(s) 1599
SaqAI TTAA 6 cut(s) 339, 548, 602, 762, 887, 1490
SatI GCNGC 6 cut(s) 16, 71, 426, 429, 700, 1185
Sau3AI GATC 4 cut(s) 262, 388, 671, 1036
Sau96I GGNCC 3 cut(s) 149, 768, 1544
SchI GAGTC 2 cut(s) 146, 1307
ScrFI CCNGG 1 cut(s) 132
SduI GDGCHC 4 cut(s) 649, 1214, 1611, 1641
SfaNI GCATC 1 cut(s) 1465
SfcI CTRYAG 2 cut(s) 141, 1162
SfuI TTCGAA 1 cut(s) 62
SinI GGWCC 3 cut(s) 149, 768, 1544
SmiMI CAYNNNNRTG 1 cut(s) 642
SmlI CTYRAG 2 cut(s) 749, 1302
SmoI CTYRAG 2 cut(s) 749, 1302
Sse9I AATT 7 cut(s) 243, 250, 279, 604, 960, 1090, 1632
SsiI CCGC 1 cut(s) 742
SspI AATATT 3 cut(s) 409, 1025, 1133
SspMI CTAG 4 cut(s) 84, 422, 536, 1061
SstI GAGCTC 1 cut(s) 1611
StyD4I CCNGG 1 cut(s) 130
StyI CCWWGG 3 cut(s) 114, 162, 187
TaaI ACNGT 5 cut(s) 218, 441, 919, 1209, 1505
TaiI ACGT 3 cut(s) 14, 175, 1488
TaqI TCGA 2 cut(s) 62, 1326
TasI AATT 7 cut(s) 243, 250, 279, 604, 960, 1090, 1632
TatI WGTACW 1 cut(s) 725
TfiI GAWTC 6 cut(s) 461, 754, 779, 1105, 1518, 1568
Tru1I TTAA 6 cut(s) 339, 548, 602, 762, 887, 1490
Tru9I TTAA 6 cut(s) 339, 548, 602, 762, 887, 1490
TscAI CASTG 2 cut(s) 223, 1083
TseFI GTSAC 1 cut(s) 79
TseI GCWGC 6 cut(s) 15, 70, 425, 428, 699, 1184
Tsp45I GTSAC 1 cut(s) 79
TspDTI ATGAA 5 cut(s) 263, 276, 534, 1413, 1437
TspRI CASTG 2 cut(s) 223, 1083
Tth111I GACNNNGTC 1 cut(s) 441
VpaK11BI GGWCC 3 cut(s) 149, 768, 1544
XapI RAATTY 1 cut(s) 604
XcmI CCANNNNNNNNNTGG 1 cut(s) 185
XmiI GTMKAC 2 cut(s) 140, 445
XspI CTAG 4 cut(s) 84, 422, 536, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.