Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007067

Physical Location & Seq

Genomic Coordinates Forward (+)

27853668 .. 27858419

Gene Structure 4752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G277800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGCTTGAAAAGAAACTGAGAAGAGAACTGAATCTGGATCCGATGGACCTGAAATCAAATCATGCTGCTCCTGTTCTCACTGATCCTACACCCTTGAGCAAGTCAAGACTTGGTGTACCTTCCAGCCTGTTACAATATTCACCTCCTGGAGCAGCTTTTTCTGCAGGTCTAATCCTAGCAATCCCTAGGAGAAAGGCTGGATTACTTGATGATGTCCGCTCTAACTCTTGGCTTGATGCTATGAAATCTTCTTCGCCTCCTCACAGAAAGATAACAAAGGATGTTAACAACGAGCCTGTGGCAAATGAGGCTGATATTGCTTATCACACTTGGATGGTTAAGTATCCATCAGCACTTACATACTTTGAACAAATCACCAATTATGCCAAGGGCAAGAGAATAGCATTATTTCTGGATTATGATGGGACTCTTTCACCGATTGTAGATAACCCTGACTGTGCCTTTATGTCGGATGCTATGCGCGCAGCTGTAAGAAGGGTGGCAAAACATTTCCCAACAGCAATTATTAGTGGAAGAAGCCATGACAAGGTATATGAGTTTGTAGGACTAAAAGAACTCTATTATGCGGGTAGTCATGGGATGGACATAATGGGCCCTGGTAGACAATCTACCGCTGATGACCACAGAAATGGTTTTAGGACTAGTGACAAACAGGGTAAGGATGTTAATTTGTTCCAGCCTGCAGCTGAATTTTTACCTATGATTGGCGAGGTTTATGAATCCCTTGTTGAAAGTACCAAAGACATTGAAGGGGCTAAAGTTGAGAATAATAAGTTCTGTGTCTCTGTACATTACCGCAATGTAGATGAGAAGAGTTGGCCTGCAGTTGCACAGTGTGTCCACGACGTTCTTAAAGACTACCCACGTCTCCGTTTGACTCATGGGCGGAAGGTTTTAGAGGTACGACCTATGATAAACTGGGACAAAGGGAAGGCCGTCACATTTTTACTTGAATCTCTTGGGTTAAGCGATTGCGAAGATGTGCTCCCAATATATATTGGAGATGACCGCACGGATGAAGATGCGTTCAAGGTCTTGAGGGCAGGAAACAGAGGTTATGGCATTTTAGTCTCTGCTGTGCCCAAGGAAAGCAATGCATTTTACTCTCTCAGGGAACCCTCAGAGGTGATGGAGTTTCTCAAGTCACTGGTGATGTGGAGGAAGTCAAGTGCTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004805 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0046351 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Trehalose_PPase

Protein Analysis

400

Amino Acids

44.67

Weight (kDa)

7.68

Isoelectric Point (pI)

37.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51460 AT5G51460 AT5G51460 AT5G51460 AT5G51460
fragaria_vesca	FvH4_7g27620
malus_domestica	MD11G1196000.v1.1
prunus_persica	Prupe.2G277800_v2.0.a1 Prupe.2G277800_v2.0.a1 Prupe.2G277800_v2.0.a1 Prupe.2G277800_v2.0.a1
pyrus_communis	pycom01g19400 pycom07g22750
rosa_chinensis	RchiOBHm_Chr1g0374491
rosa_laevigata	RLG00000026734
rosa_multiflora	Rmu_co8404293.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283450
rosa_rugosa	Rorug01G0383400 Rorug01G0383500 Rorug01G0383600
rosa_samantha	Rh1AG394300 Rh1BG358900 Rh1CG372000 Rh1DG389500
rosa_wichuraiana	Rw1G034190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	155
AccBSI	CCGCTC	1 cut(s)	219
AccI	GTMKAC	1 cut(s)	622
AccII	CGCG	1 cut(s)	483
AciI	CCGC	6 cut(s)	217, 587, 633, 817, 907, 1030
AclWI	GGATC	3 cut(s)	32, 45, 77
AcsI	RAATTY	1 cut(s)	710
AdeI	CACNNNGTG	1 cut(s)	857
AfaI	GTAC	4 cut(s)	117, 757, 810, 924
AfiI	CCNNNNNNNGG	2 cut(s)	547, 725
AgsI	TTSAA	6 cut(s)	8, 368, 752, 770, 974, 1051
AhlI	ACTAGT	1 cut(s)	662
AjiI	CACGTC	1 cut(s)	887
AjnI	CCWGG	2 cut(s)	145, 616
AluBI	AGCT	3 cut(s)	155, 488, 707
AluI	AGCT	3 cut(s)	155, 488, 707
Alw21I	GWGCWC	2 cut(s)	1008, 1195
Alw26I	GTCTC	3 cut(s)	808, 893, 1096
AlwI	GGATC	3 cut(s)	32, 45, 77
AoxI	GGCC	3 cut(s)	613, 839, 954
ApaI	GGGCCC	1 cut(s)	617
ApeKI	GCWGC	4 cut(s)	65, 152, 485, 704
ApoI	RAATTY	1 cut(s)	710
AspA2I	CCTAGG	1 cut(s)	185
AspLEI	GCGC	2 cut(s)	483, 485
AspS9I	GGNCC	3 cut(s)	46, 613, 614
AsuHPI	GGTGA	5 cut(s)	132, 367, 426, 1159, 1183
AvaII	GGWCC	1 cut(s)	46
AvrII	CCTAGG	1 cut(s)	185
BaeGI	GKGCMC	2 cut(s)	617, 1104
BamHI	GGATCC	1 cut(s)	37
BanII	GRGCYC	1 cut(s)	617
Bbv12I	GWGCWC	2 cut(s)	1008, 1195
BbvI	GCAGC	4 cut(s)	52, 164, 497, 716
BccI	CCATC	6 cut(s)	37, 328, 355, 416, 595, 1144
BceAI	ACGGC	1 cut(s)	941
BciT130I	CCWGG	2 cut(s)	147, 618
BciVI	GTATCC	1 cut(s)	354
BcoDI	GTCTC	3 cut(s)	808, 893, 1096
BcuI	ACTAGT	1 cut(s)	662
BfaI	CTAG	3 cut(s)	176, 186, 663
BfmI	CTRYAG	3 cut(s)	162, 702, 843
BfuAI	ACCTGC	1 cut(s)	155
BfuI	GTATCC	1 cut(s)	354
BisI	GCNGC	4 cut(s)	66, 153, 486, 705
BlnI	CCTAGG	1 cut(s)	185
BlsI	GCNGC	4 cut(s)	67, 154, 487, 706
Bme1390I	CCNGG	2 cut(s)	147, 618
Bme18I	GGWCC	1 cut(s)	46
BmgBI	CACGTC	1 cut(s)	887
BmgT120I	GGNCC	3 cut(s)	46, 613, 614
BmiI	GGNNCC	3 cut(s)	39, 615, 1137
BmrFI	CCNGG	2 cut(s)	147, 618
BmrI	ACTGGG	1 cut(s)	949
BmsI	GCATC	3 cut(s)	226, 463, 1033
BmuI	ACTGGG	1 cut(s)	949
BpmI	CTGGAG	1 cut(s)	168
BpuEI	CTTGAG	3 cut(s)	115, 1078, 1145
BsaJI	CCNNGG	4 cut(s)	185, 387, 616, 1104
Bsc4I	CCNNNNNNNGG	2 cut(s)	547, 725
Bse1I	ACTGG	2 cut(s)	944, 1173
Bse3DI	GCAATG	2 cut(s)	826, 1120
BseBI	CCWGG	2 cut(s)	147, 618
BseDI	CCNNGG	4 cut(s)	185, 387, 616, 1104
BseGI	GGATG	6 cut(s)	286, 339, 478, 606, 688, 1042
BseLI	CCNNNNNNNGG	2 cut(s)	547, 725
BseMI	GCAATG	2 cut(s)	826, 1120
BseMII	CTCAG	3 cut(s)	8, 1144, 1155
BseNI	ACTGG	2 cut(s)	944, 1173
BsePI	GCGCGC	1 cut(s)	481
BseRI	GAGGAG	1 cut(s)	249
BseSI	GKGCMC	2 cut(s)	617, 1104
BseXI	GCAGC	4 cut(s)	52, 164, 497, 716
Bsh1236I	CGCG	1 cut(s)	483
BshFI	GGCC	3 cut(s)	615, 841, 956
BsiHKAI	GWGCWC	2 cut(s)	1008, 1195
BslFI	GGGAC	2 cut(s)	439, 956
BslI	CCNNNNNNNGG	2 cut(s)	547, 725
BsmAI	GTCTC	3 cut(s)	808, 893, 1096
BsmBI	CGTCTC	1 cut(s)	893
BsmFI	GGGAC	2 cut(s)	439, 956
BsnI	GGCC	3 cut(s)	615, 841, 956
Bsp120I	GGGCCC	1 cut(s)	613
Bsp1286I	GDGCHC	4 cut(s)	617, 1008, 1104, 1195
Bsp1407I	TGTACA	1 cut(s)	808
Bsp143I	GATC	2 cut(s)	37, 82
BspACI	CCGC	6 cut(s)	217, 587, 633, 817, 907, 1030
BspANI	GGCC	3 cut(s)	615, 841, 956
BspCNI	CTCAG	3 cut(s)	9, 1143, 1154
BspFNI	CGCG	1 cut(s)	483
BspLI	GGNNCC	3 cut(s)	39, 615, 1137
BspMAI	CTGCAG	3 cut(s)	166, 706, 847
BspMI	ACCTGC	1 cut(s)	155
BspPI	GGATC	3 cut(s)	32, 45, 77
BsrBI	CCGCTC	1 cut(s)	219
BsrDI	GCAATG	2 cut(s)	826, 1120
BsrGI	TGTACA	1 cut(s)	808
BsrI	ACTGG	2 cut(s)	944, 1173
BssECI	CCNNGG	4 cut(s)	185, 387, 616, 1104
BssHII	GCGCGC	1 cut(s)	481
BssMI	GATC	2 cut(s)	37, 82
BssT1I	CCWWGG	3 cut(s)	185, 387, 1104
Bst2UI	CCWGG	2 cut(s)	147, 618
Bst4CI	ACNGT	2 cut(s)	458, 855
Bst6I	CTCTTC	2 cut(s)	16, 827
BstAUI	TGTACA	1 cut(s)	808
BstC8I	GCNNGC	3 cut(s)	483, 702, 843
BstDEI	CTNAG	3 cut(s)	17, 1130, 1141
BstF5I	GGATG	6 cut(s)	286, 339, 478, 606, 688, 1042
BstFNI	CGCG	1 cut(s)	483
BstHHI	GCGC	2 cut(s)	483, 485
BstKTI	GATC	2 cut(s)	40, 85
BstMAI	GTCTC	3 cut(s)	808, 893, 1096
BstMBI	GATC	2 cut(s)	37, 82
BstMWI	GCNNNNNNNGC	4 cut(s)	161, 308, 317, 482
BstNI	CCWGG	2 cut(s)	147, 618
BstSCI	CCNGG	2 cut(s)	145, 616
BstSFI	CTRYAG	3 cut(s)	162, 702, 843
BstSLI	GKGCMC	2 cut(s)	617, 1104
BstUI	CGCG	1 cut(s)	483
BstV1I	GCAGC	4 cut(s)	52, 164, 497, 716
BstX2I	RGATCY	1 cut(s)	37
BstXI	CCANNNNNNTGG	1 cut(s)	650
BstYI	RGATCY	1 cut(s)	37
BsuI	GTATCC	1 cut(s)	354
BsuRI	GGCC	3 cut(s)	615, 841, 956
BtrI	CACGTC	1 cut(s)	887
BtsCI	GGATG	6 cut(s)	286, 339, 478, 606, 688, 1042
BtsIMutI	CAGTG	3 cut(s)	78, 860, 1166
BveI	ACCTGC	1 cut(s)	155
Cac8I	GCNNGC	3 cut(s)	483, 702, 843
CfoI	GCGC	2 cut(s)	483, 485
Cfr13I	GGNCC	3 cut(s)	46, 613, 614
Csp6I	GTAC	4 cut(s)	116, 756, 809, 923
CviAII	CATG	4 cut(s)	62, 542, 596, 902
CviQI	GTAC	4 cut(s)	116, 756, 809, 923
DdeI	CTNAG	3 cut(s)	17, 1130, 1141
DpnI	GATC	2 cut(s)	39, 84
DpnII	GATC	2 cut(s)	37, 82
DraIII	CACNNNGTG	1 cut(s)	857
Eam1104I	CTCTTC	2 cut(s)	16, 827
EarI	CTCTTC	2 cut(s)	16, 827
EciI	GGCGGA	1 cut(s)	922
Eco130I	CCWWGG	3 cut(s)	185, 387, 1104
Eco24I	GRGCYC	1 cut(s)	617
Eco47I	GGWCC	1 cut(s)	46
EcoO109I	RGGNCCY	1 cut(s)	614
EcoRII	CCWGG	2 cut(s)	145, 616
EcoT14I	CCWWGG	3 cut(s)	185, 387, 1104
EcoT22I	ATGCAT	1 cut(s)	1120
EcoT38I	GRGCYC	1 cut(s)	617
ErhI	CCWWGG	3 cut(s)	185, 387, 1104
Esp3I	CGTCTC	1 cut(s)	893
FaeI	CATG	4 cut(s)	65, 545, 599, 905
FaqI	GGGAC	2 cut(s)	439, 956
FatI	CATG	4 cut(s)	61, 541, 595, 901
FauI	CCCGC	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	622
Fnu4HI	GCNGC	4 cut(s)	66, 153, 486, 705
FokI	GGATG	6 cut(s)	293, 346, 485, 613, 695, 1049
FriOI	GRGCYC	1 cut(s)	617
Fsp4HI	GCNGC	4 cut(s)	66, 153, 486, 705
FspBI	CTAG	3 cut(s)	176, 186, 663
GlaI	GCGC	2 cut(s)	482, 484
GluI	GCNGC	4 cut(s)	66, 153, 486, 705
GsuI	CTGGAG	1 cut(s)	168
HaeIII	GGCC	3 cut(s)	615, 841, 956
HhaI	GCGC	2 cut(s)	483, 485
Hin1II	CATG	4 cut(s)	65, 545, 599, 905
Hin6I	GCGC	2 cut(s)	481, 483
HinP1I	GCGC	2 cut(s)	481, 483
HincII	GTYRAC	1 cut(s)	286
HindII	GTYRAC	1 cut(s)	286
HinfI	GANTC	5 cut(s)	31, 427, 740, 898, 974
HpaI	GTTAAC	1 cut(s)	286
HphI	GGTGA	5 cut(s)	132, 367, 426, 1159, 1183
Hpy166II	GTNNAC	4 cut(s)	116, 286, 623, 862
Hpy188I	TCNGA	3 cut(s)	42, 472, 1144
Hpy188III	TCNNGA	4 cut(s)	35, 105, 413, 1057
Hpy8I	GTNNAC	4 cut(s)	116, 286, 623, 862
Hpy99I	CGWCG	1 cut(s)	869
HpyAV	CCTTC	5 cut(s)	129, 489, 764, 904, 946
HpyCH4III	ACNGT	2 cut(s)	458, 855
HpyCH4IV	ACGT	2 cut(s)	867, 886
HpyCH4V	TGCA	5 cut(s)	164, 704, 845, 851, 1118
HpyF10VI	GCNNNNNNNGC	4 cut(s)	161, 308, 317, 482
HpyF3I	CTNAG	3 cut(s)	17, 1130, 1141
HpySE526I	ACGT	2 cut(s)	867, 886
Hsp92II	CATG	4 cut(s)	65, 545, 599, 905
HspAI	GCGC	2 cut(s)	481, 483
KspAI	GTTAAC	1 cut(s)	286
Kzo9I	GATC	2 cut(s)	37, 82
LmnI	GCTCC	3 cut(s)	73, 149, 1011
Lsp1109I	GCAGC	4 cut(s)	52, 164, 497, 716
LweI	GCATC	3 cut(s)	226, 463, 1033
MaeI	CTAG	3 cut(s)	176, 186, 663
MaeII	ACGT	2 cut(s)	867, 886
MaeIII	GTNAC	4 cut(s)	129, 665, 958, 1164
MalI	GATC	2 cut(s)	39, 84
MbiI	CCGCTC	1 cut(s)	219
MboI	GATC	2 cut(s)	37, 82
MboII	GAAGA	7 cut(s)	33, 240, 243, 546, 844, 1010, 1052
MflI	RGATCY	1 cut(s)	37
MhlI	GDGCHC	4 cut(s)	617, 1008, 1104, 1195
MluCI	AATT	4 cut(s)	379, 522, 688, 710
MlyI	GAGTC	2 cut(s)	421, 892
MmeI	TCCRAC	1 cut(s)	450
Mph1103I	ATGCAT	1 cut(s)	1120
MseI	TTAA	5 cut(s)	285, 339, 687, 873, 986
MslI	CAYNNNNRTG	2 cut(s)	332, 648
MspA1I	CMGCKG	3 cut(s)	488, 635, 707
MspR9I	CCNGG	2 cut(s)	147, 618
MvaI	CCWGG	2 cut(s)	147, 618
MvnI	CGCG	1 cut(s)	483
MwoI	GCNNNNNNNGC	4 cut(s)	161, 308, 317, 482
NdeII	GATC	2 cut(s)	37, 82
NlaIII	CATG	4 cut(s)	65, 545, 599, 905
NlaIV	GGNNCC	3 cut(s)	39, 615, 1137
NmuCI	GTSAC	3 cut(s)	665, 958, 1164
NsiI	ATGCAT	1 cut(s)	1120
PauI	GCGCGC	1 cut(s)	481
PfeI	GAWTC	3 cut(s)	31, 740, 974
PfoI	TCCNGGA	1 cut(s)	145
PkrI	GCNGC	4 cut(s)	67, 154, 487, 706
PleI	GAGTC	2 cut(s)	421, 892
PpsI	GAGTC	2 cut(s)	421, 892
Psp6I	CCWGG	2 cut(s)	145, 616
PspGI	CCWGG	2 cut(s)	145, 616
PspN4I	GGNNCC	3 cut(s)	39, 615, 1137
PspOMI	GGGCCC	1 cut(s)	613
PspPI	GGNCC	3 cut(s)	46, 613, 614
PstI	CTGCAG	3 cut(s)	166, 706, 847
PsuI	RGATCY	1 cut(s)	37
PteI	GCGCGC	1 cut(s)	481
PvuII	CAGCTG	2 cut(s)	488, 707
RsaI	GTAC	4 cut(s)	117, 757, 810, 924
RsaNI	GTAC	4 cut(s)	116, 756, 809, 923
RseI	CAYNNNNRTG	2 cut(s)	332, 648
SaqAI	TTAA	5 cut(s)	285, 339, 687, 873, 986
SatI	GCNGC	4 cut(s)	66, 153, 486, 705
Sau3AI	GATC	2 cut(s)	37, 82
Sau96I	GGNCC	3 cut(s)	46, 613, 614
SchI	GAGTC	2 cut(s)	421, 892
ScrFI	CCNGG	2 cut(s)	147, 618
SduI	GDGCHC	4 cut(s)	617, 1008, 1104, 1195
SfaNI	GCATC	3 cut(s)	226, 463, 1033
SfcI	CTRYAG	3 cut(s)	162, 702, 843
SinI	GGWCC	1 cut(s)	46
SmiMI	CAYNNNNRTG	2 cut(s)	332, 648
SmlI	CTYRAG	3 cut(s)	94, 1057, 1160
SmoI	CTYRAG	3 cut(s)	94, 1057, 1160
SpeI	ACTAGT	1 cut(s)	662
Sse9I	AATT	4 cut(s)	379, 522, 688, 710
SsiI	CCGC	6 cut(s)	217, 587, 633, 817, 907, 1030
SspI	AATATT	1 cut(s)	137
SspMI	CTAG	3 cut(s)	176, 186, 663
StyD4I	CCNGG	2 cut(s)	145, 616
StyI	CCWWGG	3 cut(s)	185, 387, 1104
TaaI	ACNGT	2 cut(s)	458, 855
TaiI	ACGT	2 cut(s)	870, 889
TasI	AATT	4 cut(s)	379, 522, 688, 710
TatI	WGTACW	1 cut(s)	808
TfiI	GAWTC	3 cut(s)	31, 740, 974
Tru1I	TTAA	5 cut(s)	285, 339, 687, 873, 986
Tru9I	TTAA	5 cut(s)	285, 339, 687, 873, 986
TscAI	CASTG	3 cut(s)	85, 860, 1173
TseFI	GTSAC	3 cut(s)	665, 958, 1164
TseI	GCWGC	4 cut(s)	65, 152, 485, 704
Tsp45I	GTSAC	3 cut(s)	665, 958, 1164
TspDTI	ATGAA	3 cut(s)	257, 753, 1053
TspGWI	ACGGA	2 cut(s)	881, 1049
TspRI	CASTG	3 cut(s)	85, 860, 1173
VpaK11BI	GGWCC	1 cut(s)	46
XapI	RAATTY	1 cut(s)	710
XmaJI	CCTAGG	1 cut(s)	185
XmiI	GTMKAC	1 cut(s)	622
XspI	CTAG	3 cut(s)	176, 186, 663
Zsp2I	ATGCAT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.