Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.2G312600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0336901 |
| rosa_laevigata | RLG00000029326 |
| rosa_multiflora | Rmu_sc0002067.1_g000001 Rmu_sc0002798.1_g000007 Rmu_sc0003688.1_g000007 Rmu_sc0004920.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00278740 Rroxscaffold_4G00278780 Rroxscaffold_4G00315270 |
| rosa_rugosa | Rorug01G0128700 |
| rosa_samantha | Rh1CG140800 Rh1CG422100 Rh1CG422400 Rh1DG156700 |
| rosa_wichuraiana | Rw1G012090 Rw1G012160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1872 |
| AccII | CGCG | 2 cut(s) | 60, 271 |
| AciI | CCGC | 4 cut(s) | 58, 1006, 1484, 1861 |
| AclWI | GGATC | 1 cut(s) | 176 |
| AcoI | YGGCCR | 2 cut(s) | 1737, 2163 |
| AcsI | RAATTY | 4 cut(s) | 407, 591, 600, 2192 |
| AcuI | CTGAAG | 2 cut(s) | 921, 1454 |
| AcyI | GRCGYC | 2 cut(s) | 766, 1290 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 235, 1621 |
| AflII | CTTAAG | 2 cut(s) | 938, 1388 |
| AhlI | ACTAGT | 1 cut(s) | 1865 |
| AjnI | CCWGG | 1 cut(s) | 2165 |
| Alw21I | GWGCWC | 1 cut(s) | 2226 |
| Alw26I | GTCTC | 4 cut(s) | 32, 746, 1358, 1473 |
| AlwI | GGATC | 1 cut(s) | 176 |
| AoxI | GGCC | 4 cut(s) | 1611, 1737, 2148, 2163 |
| ApeKI | GCWGC | 4 cut(s) | 257, 1571, 1574, 2255 |
| ApoI | RAATTY | 4 cut(s) | 407, 591, 600, 2192 |
| AseI | ATTAAT | 1 cut(s) | 1598 |
| AsiSI | GCGATCGC | 1 cut(s) | 275 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 563, 1307, 1460, 1644, 1920 |
| AspS9I | GGNCC | 4 cut(s) | 1515, 1524, 1612, 2011 |
| AsuC2I | CCSGG | 1 cut(s) | 1693 |
| AsuHPI | GGTGA | 6 cut(s) | 1312, 1575, 1637, 1653, 1663, 2200 |
| AsuII | TTCGAA | 2 cut(s) | 1471, 1924 |
| AvaII | GGWCC | 3 cut(s) | 1515, 1524, 2011 |
| AxyI | CCTNAGG | 1 cut(s) | 1616 |
| BalI | TGGCCA | 1 cut(s) | 2165 |
| BanI | GGYRCC | 1 cut(s) | 1872 |
| BanII | GRGCYC | 1 cut(s) | 2226 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 968, 1000 |
| Bbv12I | GWGCWC | 1 cut(s) | 2226 |
| BbvI | GCAGC | 4 cut(s) | 269, 1558, 1561, 2267 |
| BccI | CCATC | 5 cut(s) | 461, 821, 1594, 1816, 2296 |
| BciT130I | CCWGG | 1 cut(s) | 2167 |
| BcnI | CCSGG | 1 cut(s) | 1693 |
| BcoDI | GTCTC | 4 cut(s) | 32, 746, 1358, 1473 |
| BcuI | ACTAGT | 1 cut(s) | 1865 |
| BfaI | CTAG | 8 cut(s) | 12, 639, 657, 972, 1193, 1539, 1545, 1866 |
| BfmI | CTRYAG | 2 cut(s) | 1755, 1775 |
| BfrI | CTTAAG | 2 cut(s) | 938, 1388 |
| BisI | GCNGC | 4 cut(s) | 258, 1572, 1575, 2256 |
| BlsI | GCNGC | 4 cut(s) | 259, 1573, 1576, 2257 |
| BmcAI | AGTACT | 1 cut(s) | 1543 |
| Bme1390I | CCNGG | 2 cut(s) | 1693, 2167 |
| Bme18I | GGWCC | 3 cut(s) | 1515, 1524, 2011 |
| BmgT120I | GGNCC | 4 cut(s) | 1515, 1524, 1612, 2011 |
| BmiI | GGNNCC | 3 cut(s) | 1516, 1874, 2012 |
| BmrFI | CCNGG | 2 cut(s) | 1693, 2167 |
| BmsI | GCATC | 2 cut(s) | 1139, 1667 |
| BpmI | CTGGAG | 2 cut(s) | 873, 2126 |
| Bpu10I | CCTNAGC | 1 cut(s) | 414 |
| Bpu14I | TTCGAA | 2 cut(s) | 1471, 1924 |
| BpuEI | CTTGAG | 2 cut(s) | 268, 1791 |
| BpuMI | CCSGG | 1 cut(s) | 1693 |
| BsaAI | YACGTR | 1 cut(s) | 712 |
| BsaHI | GRCGYC | 2 cut(s) | 766, 1290 |
| BsaI | GGTCTC | 1 cut(s) | 1473 |
| BsaJI | CCNNGG | 5 cut(s) | 229, 1322, 1608, 2166, 2211 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 235, 1621 |
| Bse1I | ACTGG | 2 cut(s) | 705, 1439 |
| Bse21I | CCTNAGG | 1 cut(s) | 1616 |
| Bse3DI | GCAATG | 2 cut(s) | 165, 2046 |
| BseBI | CCWGG | 1 cut(s) | 2167 |
| BseDI | CCNNGG | 5 cut(s) | 229, 1322, 1608, 2166, 2211 |
| BseGI | GGATG | 2 cut(s) | 1405, 1948 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 235, 1621 |
| BseMI | GCAATG | 2 cut(s) | 165, 2046 |
| BseMII | CTCAG | 3 cut(s) | 440, 1184, 2258 |
| BseNI | ACTGG | 2 cut(s) | 705, 1439 |
| BseRI | GAGGAG | 2 cut(s) | 83, 86 |
| BseXI | GCAGC | 4 cut(s) | 269, 1558, 1561, 2267 |
| Bsh1236I | CGCG | 2 cut(s) | 60, 271 |
| Bsh1285I | CGRYCG | 1 cut(s) | 275 |
| BshFI | GGCC | 4 cut(s) | 1613, 1739, 2150, 2165 |
| BshNI | GGYRCC | 1 cut(s) | 1872 |
| BsiEI | CGRYCG | 1 cut(s) | 275 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2226 |
| BsiSI | CCGG | 1 cut(s) | 1693 |
| BslFI | GGGAC | 4 cut(s) | 1528, 1796, 2024, 2183 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 235, 1621 |
| BsmAI | GTCTC | 4 cut(s) | 32, 746, 1358, 1473 |
| BsmFI | GGGAC | 4 cut(s) | 1528, 1796, 2024, 2183 |
| BsmI | GAATGC | 1 cut(s) | 376 |
| BsnI | GGCC | 4 cut(s) | 1613, 1739, 2150, 2165 |
| Bso31I | GGTCTC | 1 cut(s) | 1473 |
| Bsp119I | TTCGAA | 2 cut(s) | 1471, 1924 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2226 |
| Bsp1407I | TGTACA | 1 cut(s) | 1446 |
| Bsp143I | GATC | 3 cut(s) | 8, 181, 272 |
| Bsp68I | TCGCGA | 1 cut(s) | 271 |
| BspACI | CCGC | 4 cut(s) | 58, 1006, 1484, 1861 |
| BspANI | GGCC | 4 cut(s) | 1613, 1739, 2150, 2165 |
| BspCNI | CTCAG | 3 cut(s) | 439, 1183, 2257 |
| BspFNI | CGCG | 2 cut(s) | 60, 271 |
| BspHI | TCATGA | 1 cut(s) | 1251 |
| BspLI | GGNNCC | 3 cut(s) | 1516, 1874, 2012 |
| BspMAI | CTGCAG | 1 cut(s) | 1779 |
| BspPI | GGATC | 1 cut(s) | 176 |
| BspQI | GCTCTTC | 4 cut(s) | 267, 480, 1505, 1635 |
| BspT104I | TTCGAA | 2 cut(s) | 1471, 1924 |
| BspT107I | GGYRCC | 1 cut(s) | 1872 |
| BspTI | CTTAAG | 2 cut(s) | 938, 1388 |
| BspTNI | GGTCTC | 1 cut(s) | 1473 |
| BsrDI | GCAATG | 2 cut(s) | 165, 2046 |
| BsrGI | TGTACA | 1 cut(s) | 1446 |
| BsrI | ACTGG | 2 cut(s) | 705, 1439 |
| BssECI | CCNNGG | 5 cut(s) | 229, 1322, 1608, 2166, 2211 |
| BssMI | GATC | 3 cut(s) | 8, 181, 272 |
| BssNI | GRCGYC | 2 cut(s) | 766, 1290 |
| BssT1I | CCWWGG | 4 cut(s) | 229, 1322, 1608, 2211 |
| Bst2UI | CCWGG | 1 cut(s) | 2167 |
| Bst4CI | ACNGT | 7 cut(s) | 344, 355, 896, 1101, 1378, 1877, 1953 |
| Bst6I | CTCTTC | 6 cut(s) | 89, 267, 480, 569, 1505, 1635 |
| BstACI | GRCGYC | 2 cut(s) | 766, 1290 |
| BstAFI | CTTAAG | 2 cut(s) | 938, 1388 |
| BstAUI | TGTACA | 1 cut(s) | 1446 |
| BstBAI | YACGTR | 1 cut(s) | 712 |
| BstBI | TTCGAA | 2 cut(s) | 1471, 1924 |
| BstC8I | GCNNGC | 3 cut(s) | 1004, 1496, 2260 |
| BstDEI | CTNAG | 7 cut(s) | 414, 426, 1013, 1170, 1616, 2097, 2244 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 233, 1619 |
| BstF5I | GGATG | 2 cut(s) | 1405, 1948 |
| BstFNI | CGCG | 2 cut(s) | 60, 271 |
| BstKTI | GATC | 3 cut(s) | 11, 184, 275 |
| BstMAI | GTCTC | 4 cut(s) | 32, 746, 1358, 1473 |
| BstMBI | GATC | 3 cut(s) | 8, 181, 272 |
| BstMCI | CGRYCG | 1 cut(s) | 275 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1736 |
| BstNI | CCWGG | 1 cut(s) | 2167 |
| BstNSI | RCATGY | 2 cut(s) | 1498, 1700 |
| BstSCI | CCNGG | 2 cut(s) | 1691, 2165 |
| BstSFI | CTRYAG | 2 cut(s) | 1755, 1775 |
| BstUI | CGCG | 2 cut(s) | 60, 271 |
| BstV1I | GCAGC | 4 cut(s) | 269, 1558, 1561, 2267 |
| BstX2I | RGATCY | 1 cut(s) | 181 |
| BstYI | RGATCY | 1 cut(s) | 181 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1616 |
| BsuRI | GGCC | 4 cut(s) | 1613, 1739, 2150, 2165 |
| BtgZI | GCGATG | 3 cut(s) | 75, 840, 2274 |
| BtsCI | GGATG | 2 cut(s) | 1405, 1948 |
| BtsI | GCAGTG | 1 cut(s) | 1784 |
| BtsIMutI | CAGTG | 2 cut(s) | 1446, 1784 |
| BtuMI | TCGCGA | 1 cut(s) | 271 |
| Cac8I | GCNNGC | 3 cut(s) | 1004, 1496, 2260 |
| CciI | TCATGA | 1 cut(s) | 1251 |
| Cfr13I | GGNCC | 4 cut(s) | 1515, 1524, 1612, 2011 |
| CseI | GACGC | 2 cut(s) | 755, 1298 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1760, 1795 |
| CviAII | CATG | 9 cut(s) | 159, 372, 759, 1252, 1360, 1495, 1519, 1697, 2161 |
| DdeI | CTNAG | 7 cut(s) | 414, 426, 1013, 1170, 1616, 2097, 2244 |
| DpnI | GATC | 3 cut(s) | 10, 183, 274 |
| DpnII | GATC | 3 cut(s) | 8, 181, 272 |
| DraI | TTTAAA | 1 cut(s) | 2121 |
| EaeI | YGGCCR | 2 cut(s) | 1737, 2163 |
| Eam1104I | CTCTTC | 6 cut(s) | 89, 267, 480, 569, 1505, 1635 |
| EarI | CTCTTC | 6 cut(s) | 89, 267, 480, 569, 1505, 1635 |
| Ecl136II | GAGCTC | 1 cut(s) | 2224 |
| Eco130I | CCWWGG | 4 cut(s) | 229, 1322, 1608, 2211 |
| Eco147I | AGGCCT | 1 cut(s) | 2150 |
| Eco24I | GRGCYC | 1 cut(s) | 2226 |
| Eco31I | GGTCTC | 1 cut(s) | 1473 |
| Eco32I | GATATC | 2 cut(s) | 286, 1212 |
| Eco47I | GGWCC | 3 cut(s) | 1515, 1524, 2011 |
| Eco53kI | GAGCTC | 1 cut(s) | 2224 |
| Eco57I | CTGAAG | 2 cut(s) | 921, 1454 |
| Eco81I | CCTNAGG | 1 cut(s) | 1616 |
| EcoICRI | GAGCTC | 1 cut(s) | 2224 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 233, 1619 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1612 |
| EcoRI | GAATTC | 1 cut(s) | 600 |
| EcoRII | CCWGG | 1 cut(s) | 2165 |
| EcoRV | GATATC | 2 cut(s) | 286, 1212 |
| EcoT14I | CCWWGG | 4 cut(s) | 229, 1322, 1608, 2211 |
| EcoT38I | GRGCYC | 1 cut(s) | 2226 |
| ErhI | CCWWGG | 4 cut(s) | 229, 1322, 1608, 2211 |
| FaeI | CATG | 9 cut(s) | 162, 375, 762, 1255, 1363, 1498, 1522, 1700, 2164 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 134, 166 |
| FaqI | GGGAC | 4 cut(s) | 1528, 1796, 2024, 2183 |
| FatI | CATG | 9 cut(s) | 158, 371, 758, 1251, 1359, 1494, 1518, 1696, 2160 |
| FauI | CCCGC | 1 cut(s) | 1491 |
| Fnu4HI | GCNGC | 4 cut(s) | 258, 1572, 1575, 2256 |
| FokI | GGATG | 2 cut(s) | 1412, 1955 |
| FriOI | GRGCYC | 1 cut(s) | 2226 |
| Fsp4HI | GCNGC | 4 cut(s) | 258, 1572, 1575, 2256 |
| FspBI | CTAG | 8 cut(s) | 12, 639, 657, 972, 1193, 1539, 1545, 1866 |
| GluI | GCNGC | 4 cut(s) | 258, 1572, 1575, 2256 |
| GsuI | CTGGAG | 2 cut(s) | 873, 2126 |
| HaeIII | GGCC | 4 cut(s) | 1613, 1739, 2150, 2165 |
| HapII | CCGG | 1 cut(s) | 1693 |
| HgaI | GACGC | 2 cut(s) | 755, 1298 |
| Hin1I | GRCGYC | 2 cut(s) | 766, 1290 |
| Hin1II | CATG | 9 cut(s) | 162, 375, 762, 1255, 1363, 1498, 1522, 1700, 2164 |
| HindIII | AAGCTT | 1 cut(s) | 2099 |
| HinfI | GANTC | 8 cut(s) | 559, 932, 943, 1009, 1030, 1072, 1303, 2284 |
| HpaII | CCGG | 1 cut(s) | 1693 |
| HphI | GGTGA | 6 cut(s) | 1312, 1575, 1637, 1653, 1663, 2200 |
| Hpy166II | GTNNAC | 4 cut(s) | 113, 677, 1447, 1524 |
| Hpy188III | TCNNGA | 9 cut(s) | 151, 270, 531, 890, 929, 1215, 1252, 1808, 2105 |
| Hpy8I | GTNNAC | 4 cut(s) | 113, 677, 1447, 1524 |
| Hpy99I | CGWCG | 2 cut(s) | 1857, 1888 |
| HpyAV | CCTTC | 7 cut(s) | 544, 578, 793, 826, 1505, 1615, 2104 |
| HpyCH4III | ACNGT | 7 cut(s) | 344, 355, 896, 1101, 1378, 1877, 1953 |
| HpyCH4IV | ACGT | 2 cut(s) | 711, 2057 |
| HpyCH4V | TGCA | 7 cut(s) | 170, 257, 791, 1359, 1494, 1777, 2051 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1736 |
| HpyF3I | CTNAG | 7 cut(s) | 414, 426, 1013, 1170, 1616, 2097, 2244 |
| HpySE526I | ACGT | 2 cut(s) | 711, 2057 |
| Hsp92I | GRCGYC | 2 cut(s) | 766, 1290 |
| Hsp92II | CATG | 9 cut(s) | 162, 375, 762, 1255, 1363, 1498, 1522, 1700, 2164 |
| Kzo9I | GATC | 3 cut(s) | 8, 181, 272 |
| LguI | GCTCTTC | 4 cut(s) | 267, 480, 1505, 1635 |
| LmnI | GCTCC | 3 cut(s) | 719, 955, 2221 |
| Lsp1109I | GCAGC | 4 cut(s) | 269, 1558, 1561, 2267 |
| LweI | GCATC | 2 cut(s) | 1139, 1667 |
| MaeI | CTAG | 8 cut(s) | 12, 639, 657, 972, 1193, 1539, 1545, 1866 |
| MaeII | ACGT | 2 cut(s) | 711, 2057 |
| MaeIII | GTNAC | 4 cut(s) | 707, 1016, 1424, 1796 |
| MalI | GATC | 3 cut(s) | 10, 183, 274 |
| MboI | GATC | 3 cut(s) | 8, 181, 272 |
| MfeI | CAATTG | 1 cut(s) | 1792 |
| MflI | RGATCY | 1 cut(s) | 181 |
| MhlI | GDGCHC | 1 cut(s) | 2226 |
| MlsI | TGGCCA | 1 cut(s) | 2165 |
| MluNI | TGGCCA | 1 cut(s) | 2165 |
| MlyI | GAGTC | 1 cut(s) | 2293 |
| MmeI | TCCRAC | 2 cut(s) | 812, 2229 |
| Mox20I | TGGCCA | 1 cut(s) | 2165 |
| MroXI | GAANNNNTTC | 5 cut(s) | 563, 1307, 1460, 1644, 1920 |
| MscI | TGGCCA | 1 cut(s) | 2165 |
| MseI | TTAA | 8 cut(s) | 330, 881, 939, 1389, 1598, 1787, 1932, 2120 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1051 |
| Msp20I | TGGCCA | 1 cut(s) | 2165 |
| MspCI | CTTAAG | 2 cut(s) | 938, 1388 |
| MspI | CCGG | 1 cut(s) | 1693 |
| MspR9I | CCNGG | 2 cut(s) | 1693, 2167 |
| MunI | CAATTG | 1 cut(s) | 1792 |
| Mva1269I | GAATGC | 1 cut(s) | 376 |
| MvaI | CCWGG | 1 cut(s) | 2167 |
| MvnI | CGCG | 2 cut(s) | 60, 271 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1736 |
| NciI | CCSGG | 1 cut(s) | 1693 |
| NdeII | GATC | 3 cut(s) | 8, 181, 272 |
| NlaIII | CATG | 9 cut(s) | 162, 375, 762, 1255, 1363, 1498, 1522, 1700, 2164 |
| NlaIV | GGNNCC | 3 cut(s) | 1516, 1874, 2012 |
| NmuCI | GTSAC | 3 cut(s) | 707, 1424, 1796 |
| NruI | TCGCGA | 1 cut(s) | 271 |
| NspI | RCATGY | 2 cut(s) | 1498, 1700 |
| NspV | TTCGAA | 2 cut(s) | 1471, 1924 |
| PaeI | GCATGC | 1 cut(s) | 1498 |
| PagI | TCATGA | 1 cut(s) | 1251 |
| PceI | AGGCCT | 1 cut(s) | 2150 |
| PciSI | GCTCTTC | 4 cut(s) | 267, 480, 1505, 1635 |
| PctI | GAATGC | 1 cut(s) | 376 |
| PdmI | GAANNNNTTC | 5 cut(s) | 563, 1307, 1460, 1644, 1920 |
| PfeI | GAWTC | 7 cut(s) | 559, 932, 943, 1009, 1030, 1072, 1303 |
| PkrI | GCNGC | 4 cut(s) | 259, 1573, 1576, 2257 |
| Ple19I | CGATCG | 1 cut(s) | 275 |
| PleI | GAGTC | 1 cut(s) | 2292 |
| PpsI | GAGTC | 1 cut(s) | 2292 |
| Ppu21I | YACGTR | 1 cut(s) | 712 |
| PshBI | ATTAAT | 1 cut(s) | 1598 |
| Psp124BI | GAGCTC | 1 cut(s) | 2226 |
| Psp6I | CCWGG | 1 cut(s) | 2165 |
| PspGI | CCWGG | 1 cut(s) | 2165 |
| PspN4I | GGNNCC | 3 cut(s) | 1516, 1874, 2012 |
| PspPI | GGNCC | 4 cut(s) | 1515, 1524, 1612, 2011 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1861, 1893 |
| PstI | CTGCAG | 1 cut(s) | 1779 |
| PsuI | RGATCY | 1 cut(s) | 181 |
| PvuI | CGATCG | 1 cut(s) | 275 |
| RgaI | GCGATCGC | 1 cut(s) | 275 |
| RruI | TCGCGA | 1 cut(s) | 271 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1051 |
| SacI | GAGCTC | 1 cut(s) | 2226 |
| SapI | GCTCTTC | 4 cut(s) | 267, 480, 1505, 1635 |
| SaqAI | TTAA | 8 cut(s) | 330, 881, 939, 1389, 1598, 1787, 1932, 2120 |
| SatI | GCNGC | 4 cut(s) | 258, 1572, 1575, 2256 |
| Sau3AI | GATC | 3 cut(s) | 8, 181, 272 |
| Sau96I | GGNCC | 4 cut(s) | 1515, 1524, 1612, 2011 |
| ScaI | AGTACT | 1 cut(s) | 1543 |
| SchI | GAGTC | 1 cut(s) | 2293 |
| ScrFI | CCNGG | 2 cut(s) | 1693, 2167 |
| SduI | GDGCHC | 1 cut(s) | 2226 |
| SfaAI | GCGATCGC | 1 cut(s) | 275 |
| SfaNI | GCATC | 2 cut(s) | 1139, 1667 |
| SfcI | CTRYAG | 2 cut(s) | 1755, 1775 |
| SfuI | TTCGAA | 2 cut(s) | 1471, 1924 |
| SgfI | GCGATCGC | 1 cut(s) | 275 |
| SinI | GGWCC | 3 cut(s) | 1515, 1524, 2011 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1051 |
| SmlI | CTYRAG | 4 cut(s) | 247, 938, 1388, 1806 |
| SmoI | CTYRAG | 4 cut(s) | 247, 938, 1388, 1806 |
| SpeI | ACTAGT | 1 cut(s) | 1865 |
| SphI | GCATGC | 1 cut(s) | 1498 |
| SseBI | AGGCCT | 1 cut(s) | 2150 |
| SsiI | CCGC | 4 cut(s) | 58, 1006, 1484, 1861 |
| SspI | AATATT | 5 cut(s) | 127, 501, 581, 924, 1596 |
| SspMI | CTAG | 8 cut(s) | 12, 639, 657, 972, 1193, 1539, 1545, 1866 |
| SstI | GAGCTC | 1 cut(s) | 2226 |
| StuI | AGGCCT | 1 cut(s) | 2150 |
| StyD4I | CCNGG | 2 cut(s) | 1691, 2165 |
| StyI | CCWWGG | 4 cut(s) | 229, 1322, 1608, 2211 |
| TaaI | ACNGT | 7 cut(s) | 344, 355, 896, 1101, 1378, 1877, 1953 |
| TaiI | ACGT | 2 cut(s) | 714, 2060 |
| TaqI | TCGA | 5 cut(s) | 7, 386, 598, 1471, 1924 |
| TaqII | GACCGA | 1 cut(s) | 563 |
| TatI | WGTACW | 5 cut(s) | 112, 344, 1043, 1446, 1541 |
| TfiI | GAWTC | 7 cut(s) | 559, 932, 943, 1009, 1030, 1072, 1303 |
| Tru1I | TTAA | 8 cut(s) | 330, 881, 939, 1389, 1598, 1787, 1932, 2120 |
| Tru9I | TTAA | 8 cut(s) | 330, 881, 939, 1389, 1598, 1787, 1932, 2120 |
| TscAI | CASTG | 2 cut(s) | 1446, 1784 |
| TseFI | GTSAC | 3 cut(s) | 707, 1424, 1796 |
| TseI | GCWGC | 4 cut(s) | 257, 1571, 1574, 2255 |
| Tsp45I | GTSAC | 3 cut(s) | 707, 1424, 1796 |
| TspGWI | ACGGA | 4 cut(s) | 296, 1841, 1901, 2068 |
| TspRI | CASTG | 2 cut(s) | 1446, 1784 |
| Vha464I | CTTAAG | 2 cut(s) | 938, 1388 |
| VpaK11BI | GGWCC | 3 cut(s) | 1515, 1524, 2011 |
| VspI | ATTAAT | 1 cut(s) | 1598 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 233, 1619 |
| XapI | RAATTY | 4 cut(s) | 407, 591, 600, 2192 |
| XceI | RCATGY | 2 cut(s) | 1498, 1700 |
| XmnI | GAANNNNTTC | 5 cut(s) | 563, 1307, 1460, 1644, 1920 |
| XspI | CTAG | 8 cut(s) | 12, 639, 657, 972, 1193, 1539, 1545, 1866 |
| ZrmI | AGTACT | 1 cut(s) | 1543 |