Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0007603

Physical Location & Seq

Genomic Coordinates Reverse (-)

729624 .. 740713

Gene Structure 11090 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G011800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2679 bp

ATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGATCATGAAGCAGCCGGAGGAGCTGAAAAGAAGTGCTTGAATTCGGAGCTATGGCATGCATGCGCAGGGCCTCTGGTTTCCCTGCCAACGCCTGGAACTCGTGTTGTTTACTTCCCTCAGGGCCACAGTGACCAGGTTGCTGCCACTACTAACAAACAAGTTGATGCCCACATACCAAACTACCCGAGCTTGCCGCCCCAGTTGATCTGTCAGCTGCACAATGTCACAATGCATGCAGATGTGGAGACAGATGAAGTATATGCCCAAATGACATTACAGCCTTTGACGCCACAAGAGCAAAAAGAAACATTTCTTCCAATGGAGTTGGGAATTCCAAGCAAGCAACCCACAAATTACTTTTGCAAGACATTGACGGCGAGTGATACAAGTACACATGGAGGCTTCTCTGTTCCTCGTCGTGCTGCCGAGAAAGTTTTTCCTCCACTGGATTTCTCGCTACAGCCACCAGCGCAGGAACTTATTGCCAGGGATCTCCATGATGTTGAATGGAAGTTTAGGCATATTTTCCGAGGCCAACCCAAACGACATCTTCTTACCACAGGATGGAGTGTGTTTGTTAGTGCCAAAAGACTTGTTGCAGGAGATTCTGTTCTTTTTATTTGGAATGAAAAAAATCAGCTTCTTTTGGGTATTCGCCGTGCCACTCGACCGCAAACTGTGATGCCGTCATCTGTTTTGTCAAGTGATAGCATGCATATTGGACTTCTTGCTGCTGCTGCTCATGCTGCTTCAACTAATAGTTGTTTTACAGTTTTTTATAATCCAAGGGCTAGTCCATCTGAGTTTGTCATACCCCTATCAAAATACATTAAAGCAGTATTTCACACACGTGTTTCAGTTGGGATGCGATTTCGGATGCTATTTGAGACTGAAGAGTCAAGTGTCAGAAGAAGAAAAAGGTGGGGAAAGTTGGGAGAGAGAGGAAGGGCTGAGAAAGTAGTTGGTATAAGTATAAAAGAGTTTCGAAATTATAATTTAAACCCCCCCAGTTATTTTAAAAAATTTCAAATTAGTCCCTCAGAAAGTTTCAATAATTGTGTTTTGACCCCAGTTTTCTTTAAAAAATACAAAATCGCCCTTGCCGTGTCTGGACCATGGGTTGACTGTGTCCAAGTTGGTTGGGATGAGTCCACTGCAGGTGAGAGGCAGCCCAGGGTATCGTTATGGGAGATTGAGCCTTTGACAACTTTCCCCATGTACCCATCATTGTTTCCCCTTCGACTAAAACGCCCTTGGCATCCTGGGGCCTCATCTATGCAAGATAATAGAGATGAAGCTAACAGCTTAATGTGGCTACGGGGGGGAACTGGAGAGCAAGGTCTTCACTCCATGAACTTTCAACCTGTTGGTATGTTTCCTTGGATGCAACAGAGAGTGGATTCAACATTGATTGGAAATGATCACAATCCGCAGTACCAGGCCATGTTGGCTGCTGGTTTGCAGAATGTAGGAAGTGGAGATCAGCTAAGACAACATATGATGCACTTTCAGCAGCCCTTTCAGTATGTTCAGCAGTCGAGTAGCCACAATCCGATGTTGCAGTTGCAACAGCAAATTCAGCAATCAATCCCTCATAATATTCTGCAGGCACAACCACAAGTTTCACTGGAGAATCTGCCTCAGCACCTTCTACAGCAACAATTTAACAATCAAACAGAGGAGCAGGTGCAGCAACAGCAAAACAACTATCATGATGCACTCAAGGTTCAAACTGAACAGCTCCAACAGAGTCAACAAATGAATGTGCCATCTCCATCATTTCCTAAAACAGACTTCAGTGATTCAAACACAAAGTTCTCAGCATCTACTACCCCTAGACAGAACATGCTTGGTACACTTTGTCCTGAAGGGAGTGGAAATCTTTTAAGCTCATCCAGGGCTGGTCATTCTATGCCAACTGAGCAGTTACCTCAACAATCTTGGGCTCCAAAGTATGCACATGCACAGGTCAATGCTTTTGCCAACTCAATGTCATTTCCACCATTTAATGAGAAAGACAATGCAGTTGAGCAAGAGAATTGTAATTCAGATTCCCAGAATCCTACTCTCTTTGGTGTTAATATTGAATCATCTGGACTTCTGTTCCCCACCACAGCGCCCAGTTTTGCCACTTCTTCAAATGATGCTGACATGTCAATGCCATTAGGAGACTCTGGATTTCAGAGCTCTCTGTATGGTTGCATGCAAGACTCATCTGAGTTGTTGCACAGTGCAGGGCAAGTTGACCCACCAACCCCAAATTGTACATTTGTCAAGGTTTACAAGTCAGGTTCGGTTGGCCGCTCACTGGACATATCCCGGTTCAGCAGTTACCATGAGCTGCGAGAAGAGCTGGGGCAGATGTTCGGAATTGAGGGGAAGTTGGAAGACCGTCTTAGATCAGGCTGGCAGCTTGTATTCGTTGACAGGGAGAATGATGTGCTTCTCCTTGGTGACGACCCATGGGAGTCATTTGTGAACAATGTTTGGTATATCAAGATACTTTCGCCCGAGGATGTACACAAAATGGGGGACCAAGCAGTTGAACCCTTTAGCCCGAATACAGGTCAAAGGTTGAACAGCGGTGGCGGTGAAGCTCAAGACATTGTTTCCGGGCTCCCATCTCTTGGCTCACTTGAATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0009908 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

893

Amino Acids

99.7

Weight (kDa)

6.15

Isoelectric Point (pI)

61.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37020 AT5G37020 AT5G37020
fragaria_vesca	FvH4_1g27650 FvH4_1g27650 FvH4_1g27650
malus_domestica	MD09G1282200.v1.1 MD17G1272200.v1.1
prunus_persica	Prupe.3G011800_v2.0.a1
pyrus_communis	pycom09g19010 pycom17g27100
rosa_chinensis	RchiOBHm_Chr3g0487771
rosa_laevigata	RLG00000022974
rosa_multiflora	Rmu_sc0009101.1_g000014 Rmu_sc0040239.1_g000002 Rmu_sc0040567.1_g000004
rosa_roxburghii	Rroxscaffold_6G00394490
rosa_rugosa	Rorug03G0236300 Rorug03G0236400
rosa_samantha	Rh3AG284500 Rh3BG321300 Rh3CG319700 Rh3DG318200
rosa_wichuraiana	Rw3G025230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	813, 1026
AarI	CACCTGC	2 cut(s)	1181, 1708
AasI	GACNNNNNNGTC	1 cut(s)	928
Acc16I	TGCGCA	1 cut(s)	97
Acc36I	ACCTGC	2 cut(s)	1181, 1708
AccB7I	CCANNNNNTGG	3 cut(s)	125, 597, 2660
AccBSI	CCGCTC	1 cut(s)	2337
AciI	CCGC	6 cut(s)	227, 704, 1463, 2335, 2616, 2622
AclWI	GGATC	2 cut(s)	42, 531
AcoI	YGGCCR	1 cut(s)	2332
AcsI	RAATTY	4 cut(s)	73, 363, 1055, 1608
AcuI	CTGAAG	3 cut(s)	945, 1813, 1920
AcvI	CACGTG	1 cut(s)	884
AcyI	GRCGYC	1 cut(s)	320
AfaI	GTAC	6 cut(s)	424, 1253, 1469, 1888, 2299, 2553
AfiI	CCNNNNNNNGG	5 cut(s)	125, 597, 2341, 2597, 2660
AflIII	ACRYGT	3 cut(s)	881, 883, 2184
AjnI	CCWGG	7 cut(s)	124, 165, 518, 1205, 1294, 1470, 1928
AleI	CACNNNNGTG	1 cut(s)	882
AloI	GAACNNNNNNTCC	2 cut(s)	627, 659
Alw21I	GWGCWC	1 cut(s)	2222
Alw26I	GTCTC	3 cut(s)	272, 914, 2196
AlwI	GGATC	2 cut(s)	42, 531
Ama87I	CYCGRG	2 cut(s)	217, 2543
AoxI	GGCC	6 cut(s)	101, 154, 565, 1299, 1473, 2332
ApoI	RAATTY	4 cut(s)	73, 363, 1055, 1608
Asp700I	GAANNNNTTC	1 cut(s)	342
AspLEI	GCGC	3 cut(s)	98, 505, 2152
AspS9I	GGNCC	5 cut(s)	101, 154, 1145, 1299, 2566
AsuC2I	CCSGG	2 cut(s)	2353, 2647
AsuHPI	GGTGA	3 cut(s)	1205, 2498, 2636
AsuII	TTCGAA	1 cut(s)	1018
AvaI	CYCGRG	2 cut(s)	217, 2543
AvaII	GGWCC	2 cut(s)	1145, 2566
AxyI	CCTNAGG	1 cut(s)	150
BanII	GRGCYC	3 cut(s)	1981, 2222, 2652
BauI	CACGAG	1 cut(s)	132
BbrPI	CACGTG	1 cut(s)	884
BbsI	GAAGAC	2 cut(s)	1367, 2427
Bbv12I	GWGCWC	1 cut(s)	2222
BbvCI	CCTCAGC	1 cut(s)	1674
BccI	CCATC	6 cut(s)	591, 838, 1264, 1810, 1816, 2662
BceAI	ACGGC	4 cut(s)	423, 675, 703, 1121
BciT130I	CCWGG	7 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930
BclI	TGATCA	1 cut(s)	1453
BcnI	CCSGG	2 cut(s)	2353, 2647
BcoDI	GTCTC	3 cut(s)	272, 914, 2196
BfaI	CTAG	2 cut(s)	825, 1869
BfmI	CTRYAG	4 cut(s)	491, 1188, 1637, 1685
BfoI	RGCGCY	1 cut(s)	2153
BfuAI	ACCTGC	2 cut(s)	1181, 1708
BglI	GCCNNNNNGGC	1 cut(s)	1481
Bme1390I	CCNGG	9 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930, 2353, 2647
Bme18I	GGWCC	2 cut(s)	1145, 2566
BmeT110I	CYCGRG	2 cut(s)	217, 2543
BmgT120I	GGNCC	5 cut(s)	101, 154, 1145, 1299, 2566
BmiI	GGNNCC	4 cut(s)	1300, 1980, 2567, 2651
BmrFI	CCNGG	9 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930, 2353, 2647
BmrI	ACTGGG	4 cut(s)	226, 1035, 1097, 2148
BmuI	ACTGGG	4 cut(s)	226, 1035, 1097, 2148
BpiI	GAAGAC	2 cut(s)	1367, 2427
BpmI	CTGGAG	2 cut(s)	1383, 1682
Bpu10I	CCTNAGC	1 cut(s)	1674
Bpu14I	TTCGAA	1 cut(s)	1018
BpuEI	CTTGAG	2 cut(s)	1739, 2616
BpuMI	CCSGG	2 cut(s)	2353, 2647
BsaAI	YACGTR	1 cut(s)	884
BsaBI	GATNNNNATC	1 cut(s)	1458
BsaHI	GRCGYC	1 cut(s)	320
BsaXI	ACNNNNNCTCC	2 cut(s)	627, 657
Bsc4I	CCNNNNNNNGG	5 cut(s)	125, 597, 2341, 2597, 2660
Bse1I	ACTGG	8 cut(s)	232, 483, 1041, 1103, 1366, 1665, 2154, 2346
Bse21I	CCTNAGG	1 cut(s)	150
Bse8I	GATNNNNATC	1 cut(s)	1458
BseBI	CCWGG	7 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930
BseGI	GGATG	8 cut(s)	602, 903, 915, 1183, 1291, 1422, 1925, 2554
BseJI	GATNNNNATC	1 cut(s)	1458
BseLI	CCNNNNNNNGG	5 cut(s)	125, 597, 2341, 2597, 2660
BseMII	CTCAG	8 cut(s)	164, 825, 975, 1086, 1688, 1866, 1944, 2241
BseNI	ACTGG	8 cut(s)	232, 483, 1041, 1103, 1366, 1665, 2154, 2346
BseRI	GAGGAG	2 cut(s)	66, 1727
BseYI	CCCAGC	1 cut(s)	2386
BsgI	GTGCAG	3 cut(s)	233, 1742, 2286
Bsh1285I	CGRYCG	1 cut(s)	704
BshFI	GGCC	6 cut(s)	103, 156, 567, 1301, 1475, 2334
BsiEI	CGRYCG	1 cut(s)	704
BsiHKAI	GWGCWC	1 cut(s)	2222
BsiHKCI	CYCGRG	2 cut(s)	217, 2543
BsiSI	CCGG	3 cut(s)	48, 2353, 2646
BslFI	GGGAC	2 cut(s)	1053, 2579
BslI	CCNNNNNNNGG	5 cut(s)	125, 597, 2341, 2597, 2660
BsmAI	GTCTC	3 cut(s)	272, 914, 2196
BsmFI	GGGAC	2 cut(s)	1053, 2579
BsnI	GGCC	6 cut(s)	103, 156, 567, 1301, 1475, 2334
BsoBI	CYCGRG	2 cut(s)	217, 2543
Bsp119I	TTCGAA	1 cut(s)	1018
Bsp1286I	GDGCHC	3 cut(s)	1981, 2222, 2652
Bsp1407I	TGTACA	2 cut(s)	2297, 2551
Bsp143I	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
Bsp19I	CCATGG	2 cut(s)	1148, 2495
BspACI	CCGC	6 cut(s)	227, 704, 1463, 2335, 2616, 2622
BspANI	GGCC	6 cut(s)	103, 156, 567, 1301, 1475, 2334
BspCNI	CTCAG	8 cut(s)	163, 826, 976, 1085, 1687, 1865, 1945, 2242
BspHI	TCATGA	2 cut(s)	37, 1744
BspLI	GGNNCC	4 cut(s)	1300, 1980, 2567, 2651
BspMAI	CTGCAG	2 cut(s)	1192, 1641
BspMI	ACCTGC	2 cut(s)	1181, 1708
BspPI	GGATC	2 cut(s)	42, 531
BspQI	GCTCTTC	1 cut(s)	2376
BspT104I	TTCGAA	1 cut(s)	1018
BsrBI	CCGCTC	1 cut(s)	2337
BsrGI	TGTACA	2 cut(s)	2297, 2551
BsrI	ACTGG	8 cut(s)	232, 483, 1041, 1103, 1366, 1665, 2154, 2346
BssMI	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
BssNI	GRCGYC	1 cut(s)	320
BssSI	CACGAG	1 cut(s)	132
BssT1I	CCWWGG	6 cut(s)	818, 1148, 1286, 1412, 2482, 2495
Bst2BI	CACGAG	1 cut(s)	132
Bst2UI	CCWGG	7 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930
Bst4CI	ACNGT	6 cut(s)	161, 712, 805, 1160, 2264, 2426
Bst6I	CTCTTC	2 cut(s)	921, 2376
BstACI	GRCGYC	1 cut(s)	320
BstAUI	TGTACA	2 cut(s)	2297, 2551
BstBAI	YACGTR	1 cut(s)	884
BstBI	TTCGAA	1 cut(s)	1018
BstC8I	GCNNGC	9 cut(s)	90, 94, 224, 267, 374, 746, 1641, 2237, 2441
BstDSI	CCRYGG	2 cut(s)	1148, 2495
BstF5I	GGATG	8 cut(s)	602, 903, 915, 1183, 1291, 1422, 1925, 2554
BstH2I	RGCGCY	1 cut(s)	2153
BstHHI	GCGC	3 cut(s)	98, 505, 2152
BstKTI	GATC	6 cut(s)	37, 240, 526, 1456, 1516, 2435
BstMAI	GTCTC	3 cut(s)	272, 914, 2196
BstMBI	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
BstMCI	CGRYCG	1 cut(s)	704
BstNI	CCWGG	7 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930
BstNSI	RCATGY	8 cut(s)	92, 96, 269, 748, 1882, 1997, 2188, 2239
BstSCI	CCNGG	9 cut(s)	124, 165, 518, 1205, 1294, 1470, 1928, 2351, 2645
BstSFI	CTRYAG	4 cut(s)	491, 1188, 1637, 1685
BstV2I	GAAGAC	2 cut(s)	1367, 2427
BstX2I	RGATCY	1 cut(s)	523
BstYI	RGATCY	1 cut(s)	523
Bsu36I	CCTNAGG	1 cut(s)	150
BsuRI	GGCC	6 cut(s)	103, 156, 567, 1301, 1475, 2334
BtgI	CCRYGG	2 cut(s)	1148, 2495
BtsCI	GGATG	8 cut(s)	602, 903, 915, 1183, 1291, 1422, 1925, 2554
BtsI	GCAGTG	1 cut(s)	1185
BtsIMutI	CAGTG	7 cut(s)	166, 476, 1185, 1658, 1837, 2269, 2339
BveI	ACCTGC	2 cut(s)	1181, 1708
Cac8I	GCNNGC	9 cut(s)	90, 94, 224, 267, 374, 746, 1641, 2237, 2441
CciI	TCATGA	2 cut(s)	37, 1744
CfoI	GCGC	3 cut(s)	98, 505, 2152
Cfr13I	GGNCC	5 cut(s)	101, 154, 1145, 1299, 2566
CseI	GACGC	1 cut(s)	328
CsiI	ACCWGGT	1 cut(s)	165
Csp6I	GTAC	6 cut(s)	423, 1252, 1468, 1887, 2298, 2552
CviQI	GTAC	6 cut(s)	423, 1252, 1468, 1887, 2298, 2552
DpnI	GATC	6 cut(s)	36, 239, 525, 1455, 1515, 2434
DpnII	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
DraI	TTTAAA	3 cut(s)	1032, 1051, 1114
DrdI	GACNNNNNNGTC	1 cut(s)	928
DseDI	GACNNNNNNGTC	1 cut(s)	928
EaeI	YGGCCR	1 cut(s)	2332
Eam1104I	CTCTTC	2 cut(s)	921, 2376
EarI	CTCTTC	2 cut(s)	921, 2376
Ecl136II	GAGCTC	1 cut(s)	2220
Eco130I	CCWWGG	6 cut(s)	818, 1148, 1286, 1412, 2482, 2495
Eco24I	GRGCYC	3 cut(s)	1981, 2222, 2652
Eco47I	GGWCC	2 cut(s)	1145, 2566
Eco53kI	GAGCTC	1 cut(s)	2220
Eco57I	CTGAAG	3 cut(s)	945, 1813, 1920
Eco72I	CACGTG	1 cut(s)	884
Eco81I	CCTNAGG	1 cut(s)	150
Eco88I	CYCGRG	2 cut(s)	217, 2543
EcoICRI	GAGCTC	1 cut(s)	2220
EcoO109I	RGGNCCY	2 cut(s)	101, 1299
EcoRI	GAATTC	2 cut(s)	73, 363
EcoRII	CCWGG	7 cut(s)	124, 165, 518, 1205, 1294, 1470, 1928
EcoT14I	CCWWGG	6 cut(s)	818, 1148, 1286, 1412, 2482, 2495
EcoT22I	ATGCAT	3 cut(s)	94, 267, 750
EcoT38I	GRGCYC	3 cut(s)	1981, 2222, 2652
ErhI	CCWWGG	6 cut(s)	818, 1148, 1286, 1412, 2482, 2495
FalI	AAGNNNNNCTT	4 cut(s)	53, 85, 2412, 2444
FaqI	GGGAC	2 cut(s)	1053, 2579
FauNDI	CATATG	1 cut(s)	1530
FbaI	TGATCA	1 cut(s)	1453
FokI	GGATG	8 cut(s)	609, 910, 922, 1190, 1278, 1429, 1912, 2561
FriOI	GRGCYC	3 cut(s)	1981, 2222, 2652
FspBI	CTAG	2 cut(s)	825, 1869
FspI	TGCGCA	1 cut(s)	97
GlaI	GCGC	3 cut(s)	97, 504, 2151
GsaI	CCCAGC	1 cut(s)	2390
GsuI	CTGGAG	2 cut(s)	1383, 1682
HaeII	RGCGCY	1 cut(s)	2153
HaeIII	GGCC	6 cut(s)	103, 156, 567, 1301, 1475, 2334
HapII	CCGG	3 cut(s)	48, 2353, 2646
HgaI	GACGC	1 cut(s)	328
HhaI	GCGC	3 cut(s)	98, 505, 2152
Hin1I	GRCGYC	1 cut(s)	320
Hin6I	GCGC	3 cut(s)	96, 503, 2150
HinP1I	GCGC	3 cut(s)	96, 503, 2150
HincII	GTYRAC	4 cut(s)	1156, 1787, 2278, 2458
HindII	GTYRAC	4 cut(s)	1156, 1787, 2278, 2458
HindIII	AAGCTT	1 cut(s)	5
HpaII	CCGG	3 cut(s)	48, 2353, 2646
HphI	GGTGA	3 cut(s)	1205, 2498, 2636
Hpy188III	TCNNGA	8 cut(s)	38, 1143, 1745, 1898, 2127, 2208, 2530, 2633
Hpy99I	CGWCG	1 cut(s)	453
HpyAV	CCTTC	4 cut(s)	972, 1280, 1691, 1895
HpyCH4III	ACNGT	6 cut(s)	161, 712, 805, 1160, 2264, 2426
HpyCH4IV	ACGT	1 cut(s)	883
HpySE526I	ACGT	1 cut(s)	883
Hsp92I	GRCGYC	1 cut(s)	320
HspAI	GCGC	3 cut(s)	96, 503, 2150
Ksp22I	TGATCA	1 cut(s)	1453
Kzo9I	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
LguI	GCTCTTC	1 cut(s)	2376
LmnI	GCTCC	6 cut(s)	53, 79, 1714, 1779, 1984, 2655
MabI	ACCWGGT	1 cut(s)	165
MaeI	CTAG	2 cut(s)	825, 1869
MaeII	ACGT	1 cut(s)	883
MaeIII	GTNAC	5 cut(s)	161, 256, 1959, 2363, 2486
MalI	GATC	6 cut(s)	36, 239, 525, 1455, 1515, 2434
MbiI	CCGCTC	1 cut(s)	2337
MboI	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
MboII	GAAGA	9 cut(s)	338, 575, 938, 954, 957, 1367, 2160, 2393, 2432
MflI	RGATCY	1 cut(s)	523
MhlI	GDGCHC	3 cut(s)	1981, 2222, 2652
MlyI	GAGTC	6 cut(s)	938, 1190, 1792, 2198, 2237, 2510
MmeI	TCCRAC	2 cut(s)	1801, 2397
Mph1103I	ATGCAT	3 cut(s)	94, 267, 750
MroXI	GAANNNNTTC	1 cut(s)	342
MseI	TTAA	9 cut(s)	864, 1031, 1050, 1113, 1340, 1698, 1919, 2040, 2112
MslI	CAYNNNNRTG	3 cut(s)	270, 882, 2189
MspA1I	CMGCKG	2 cut(s)	247, 2616
MspI	CCGG	3 cut(s)	48, 2353, 2646
MspR9I	CCNGG	9 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930, 2353, 2647
MvaI	CCWGG	7 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930
NciI	CCSGG	2 cut(s)	2353, 2647
NcoI	CCATGG	2 cut(s)	1148, 2495
NdeI	CATATG	1 cut(s)	1530
NdeII	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
NlaIV	GGNNCC	4 cut(s)	1300, 1980, 2567, 2651
NmeAIII	GCCGAG	1 cut(s)	484
NmuCI	GTSAC	3 cut(s)	161, 256, 2486
NsbI	TGCGCA	1 cut(s)	97
NsiI	ATGCAT	3 cut(s)	94, 267, 750
NspI	RCATGY	8 cut(s)	92, 96, 269, 748, 1882, 1997, 2188, 2239
NspV	TTCGAA	1 cut(s)	1018
OliI	CACNNNNGTG	1 cut(s)	882
PaeI	GCATGC	5 cut(s)	92, 96, 269, 748, 2239
PagI	TCATGA	2 cut(s)	37, 1744
PaqCI	CACCTGC	2 cut(s)	1181, 1708
PasI	CCCWGGG	1 cut(s)	1206
PciI	ACATGT	1 cut(s)	2184
PciSI	GCTCTTC	1 cut(s)	2376
PcsI	WCGNNNNNNNCGW	1 cut(s)	1134
PdmI	GAANNNNTTC	1 cut(s)	342
PfeI	GAWTC	7 cut(s)	638, 1433, 1666, 1835, 2084, 2092, 2120
PflFI	GACNNNGTC	1 cut(s)	1160
PflMI	CCANNNNNTGG	3 cut(s)	125, 597, 2660
PleI	GAGTC	6 cut(s)	937, 1189, 1791, 2198, 2237, 2509
PmaCI	CACGTG	1 cut(s)	884
PmlI	CACGTG	1 cut(s)	884
PpsI	GAGTC	6 cut(s)	937, 1189, 1791, 2198, 2237, 2509
Ppu21I	YACGTR	1 cut(s)	884
PscI	ACATGT	1 cut(s)	2184
PsiI	TTATAA	2 cut(s)	813, 1026
Psp124BI	GAGCTC	1 cut(s)	2222
Psp6I	CCWGG	7 cut(s)	124, 165, 518, 1205, 1294, 1470, 1928
PspCI	CACGTG	1 cut(s)	884
PspFI	CCCAGC	1 cut(s)	2386
PspGI	CCWGG	7 cut(s)	124, 165, 518, 1205, 1294, 1470, 1928
PspN4I	GGNNCC	4 cut(s)	1300, 1980, 2567, 2651
PspPI	GGNCC	5 cut(s)	101, 154, 1145, 1299, 2566
PstI	CTGCAG	2 cut(s)	1192, 1641
PsuI	RGATCY	1 cut(s)	523
PsyI	GACNNNGTC	1 cut(s)	1160
PvuII	CAGCTG	1 cut(s)	247
RsaI	GTAC	6 cut(s)	424, 1253, 1469, 1888, 2299, 2553
RsaNI	GTAC	6 cut(s)	423, 1252, 1468, 1887, 2298, 2552
RseI	CAYNNNNRTG	3 cut(s)	270, 882, 2189
SacI	GAGCTC	1 cut(s)	2222
SapI	GCTCTTC	1 cut(s)	2376
SaqAI	TTAA	9 cut(s)	864, 1031, 1050, 1113, 1340, 1698, 1919, 2040, 2112
Sau3AI	GATC	6 cut(s)	34, 237, 523, 1453, 1513, 2432
Sau96I	GGNCC	5 cut(s)	101, 154, 1145, 1299, 2566
SchI	GAGTC	6 cut(s)	938, 1190, 1792, 2198, 2237, 2510
ScrFI	CCNGG	9 cut(s)	126, 167, 520, 1207, 1296, 1472, 1930, 2353, 2647
SduI	GDGCHC	3 cut(s)	1981, 2222, 2652
SexAI	ACCWGGT	1 cut(s)	165
SfcI	CTRYAG	4 cut(s)	491, 1188, 1637, 1685
SfuI	TTCGAA	1 cut(s)	1018
SinI	GGWCC	2 cut(s)	1145, 2566
SmiMI	CAYNNNNRTG	3 cut(s)	270, 882, 2189
SmlI	CTYRAG	2 cut(s)	1754, 2631
SmoI	CTYRAG	2 cut(s)	1754, 2631
SphI	GCATGC	5 cut(s)	92, 96, 269, 748, 2239
SsiI	CCGC	6 cut(s)	227, 704, 1463, 2335, 2616, 2622
SspI	AATATT	3 cut(s)	1633, 2116, 2675
SspMI	CTAG	2 cut(s)	825, 1869
SstI	GAGCTC	1 cut(s)	2222
StyD4I	CCNGG	9 cut(s)	124, 165, 518, 1205, 1294, 1470, 1928, 2351, 2645
StyI	CCWWGG	6 cut(s)	818, 1148, 1286, 1412, 2482, 2495
TaaI	ACNGT	6 cut(s)	161, 712, 805, 1160, 2264, 2426
TaiI	ACGT	1 cut(s)	886
TaqI	TCGA	4 cut(s)	700, 1018, 1273, 1571
TatI	WGTACW	3 cut(s)	422, 2297, 2551
TauI	GCSGC	2 cut(s)	229, 2337
TfiI	GAWTC	7 cut(s)	638, 1433, 1666, 1835, 2084, 2092, 2120
Tru1I	TTAA	9 cut(s)	864, 1031, 1050, 1113, 1340, 1698, 1919, 2040, 2112
Tru9I	TTAA	9 cut(s)	864, 1031, 1050, 1113, 1340, 1698, 1919, 2040, 2112
TscAI	CASTG	7 cut(s)	166, 483, 1192, 1665, 1837, 2269, 2346
TseFI	GTSAC	3 cut(s)	161, 256, 2486
Tsp45I	GTSAC	3 cut(s)	161, 256, 2486
TspDTI	ATGAA	7 cut(s)	17, 54, 300, 675, 1341, 1400, 1808
TspRI	CASTG	7 cut(s)	166, 483, 1192, 1665, 1837, 2269, 2346
Tth111I	GACNNNGTC	1 cut(s)	1160
Van91I	CCANNNNNTGG	3 cut(s)	125, 597, 2660
VpaK11BI	GGWCC	2 cut(s)	1145, 2566
XapI	RAATTY	4 cut(s)	73, 363, 1055, 1608
XceI	RCATGY	8 cut(s)	92, 96, 269, 748, 1882, 1997, 2188, 2239
XmnI	GAANNNNTTC	1 cut(s)	342
XspI	CTAG	2 cut(s)	825, 1869
Zsp2I	ATGCAT	3 cut(s)	94, 267, 750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.