Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0007603

Physical Location & Seq

Genomic Coordinates Forward (+)

19800334 .. 19811778

Gene Structure 11445 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g19010.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGCTAGGTGGGTTGTACAGAGACCTTCCTCTGCCCTATTCGACGAAGAAAGAGAAGCCCGGCAACGACACGGTGTGGTCGAGCAGCACGAAGATGGCGTCGCAGACGATTCTGAAGGCACAGAATAAGCCCAGATCGTCAAATGCGCTGCAACCGAAAATTACAGCATCAACGGCGGTTGCATTGTCACCGACAGTGATATACGGTGACATGAAGCTGTCGACATCAGGGTTGGGTCAGCAGGATCATGAAGGAGGGGCAGGAGGAGGAGGATTGGAAAAGAAGTGCTTGAATTCGGAGCTTTGGCATGCGTGCGCGGGACCTCTGGTGTCCCTGCCGACACCTGGGACTCGTGTGGTCTACTTTCCACAGGGCCACAGCGACCAGGTTGCTGCCACTACCAACAAGCAAGTTGATGCCCACATACCAAACTACCCGAACTTGCCACCCCAGTTGATCTGTCAGCTCCACAATGTGACCATGCATGCAGATGTGGAGACAGATGAAGTATATGCCCAAATGACACTGCAGCCTTTGACGCCGCAAGAACAAAAGGAAACATTTCTTCCAATGGAGTTAGGGCTTCCAAGCAAGCAACCGACAAACTACTTTTGCAAGACATTGACGGCGAGTGATACTAGTACACACGGAGGCTTCTCTGTTCCTCGTCGTGCTGCCGAGAAAGTTTTTCCTCCACTGGATTTTTCGCTACAACCTCCAGCTCAGGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTAGGCATATTTTTCGAGGACAGCCGAAACGACATCTTCTTACTACAGGCTGGAGTGTGTTTGTTAGTGCCAAAAGACTTGTTGCTGGAGATTCTGTTCTTTTTATTTGGAATGAAAAGAATCAGCTTCTTTTGGGGATTCGTCATGCCACTCGACCACAAACTGTGATGCCGTCTTCTGTTTTGTCAAGCGATAGCATGCATATTGGACTTCTTGCAGCTGCGGCTCATGCAGCTTCAACTAATAGCTGTTTTACAGTTTTTTATAATCCAAGGGCTAGTCCATCTGAGTTTGTCATACCCCTATCAAAATACATTAAAGCAGTATTTCACACACGTGTTTCAGTTGGGATGCGATTCCGGATGCTATTTGAGACTGAAGAGTCTAGTGTCAGAAGGTACATGGGTACTATAACTGGCATAAGTGACTTGGATCCTGTTCGGTGGCCAAATTCTCATTGGCGATCTGTCAAGGTTGGTTGGGATGAGTCAACTTCAGGTGAGAGGCAGCCAAGGGTATCGTTATGGGAGATTGAGCCTTTGACAACTTTCCCCATGTACCCATCTCTGTTTCCCCTTCGACTGAAACGTCCTTGGATTCCTGGGGCCTCTTCTTTGCATGATAATAGAGATGAAGCTAATAGCTTAATGTGGCTAAGGGGGGGAGCTGGGGAGCAAGGTCTTCAGTCAATGAACTTTCAAAATGTTGGTATGTTTCCATGGATGCAACAGAGATTGGATTCGACATTGATTGGAAATGATCACAATCAGCAGTACCAGTCCATGTTGGCTGCTGGTTTGCAGAATCTAGGAAGTGGGGATCAACTAAGACAACAGATGATGCACTTTCAGCAGCCTTTTCAATATGTTCAGCAGCCGGGTAGCCACAATCCGATGCTGCAGTTGCAACAGCAAGCAATTCAGCAGTCAATCCCTCATAATATCCTGCAGGGACAGCCACAAGTTTCGATGGAGAATATGCCTCAGCAACTTCTCCAGCAACAATTTAACAATCAAACTGATGTGCAGGTGCAGCAACAGCAAAACGCCTATCAGGATGCACTCAAGGTTCAAAATGAACAGCTCCATCAGAGTCATGTGCCATCTCCATCATTTACAAAATCAGACTTCAGTGATTCAAGCACAAAGTTCTCCGCATCTACTACTCCTAGACAGAACATGCTTGGTACACTGTGTCCTGAGGGGAGCGGAAATCTTTTGAGCATGTCCAGTGCTGGTCATTCAATGCCAACTGAGCAGTCACCTCAACAATCCTGGGCTTCTAAGTATGCACATGGACAAGCCAATGCTTTTTCCAACTCAATGTCATTTCCACCATTTAACGAGAAAGACAACGCAGTCGAGCAAGAGAATTTAAATTCAGATACCCATAATCCTACTCTGTTTGGTGTTAATATTGAATCTTCTGGACTTCTATTCCCAAACACTGCACCCAGTTTTGCGACTTCGTCAAATGATGCTGACATTTCAATGCCTTTAGGGAACTCAGGATTTCAGAGCTCTCTGTATGGTTGCATGCAAGTCTCATCTGAGTTGTTGCACGGTGCAGGGCAAGTTGATCCACCAACCCCCAACAATTGTACATTTGTCAAGGTTTACAAGTCAGGGTCGGTTGGCCGCTCAATTGACATCTCCCGGTTCAGCAGCTATCATGAGCTGCGAGAAGAGCTGGGACAGATGTTTGGAATTGAGGGGAAGTTGGAATATCGTCTTAGATCAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0009908 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

837

Amino Acids

92.7

Weight (kDa)

6.72

Isoelectric Point (pI)

62.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37020 AT5G37020 AT5G37020
fragaria_vesca	FvH4_1g27650 FvH4_1g27650 FvH4_1g27650
malus_domestica	MD09G1282200.v1.1 MD17G1272200.v1.1
prunus_persica	Prupe.3G011800_v2.0.a1
pyrus_communis	pycom09g19010 pycom17g27100
rosa_chinensis	RchiOBHm_Chr3g0487771
rosa_laevigata	RLG00000022974
rosa_multiflora	Rmu_sc0009101.1_g000014 Rmu_sc0040239.1_g000002 Rmu_sc0040567.1_g000004
rosa_roxburghii	Rroxscaffold_6G00394490
rosa_rugosa	Rorug03G0236300 Rorug03G0236400
rosa_samantha	Rh3AG284500 Rh3BG321300 Rh3CG319700 Rh3DG318200
rosa_wichuraiana	Rw3G025230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1032
AarI	CACCTGC	1 cut(s)	1783
AasI	GACNNNNNNGTC	3 cut(s)	1147, 1353, 2123
Acc36I	ACCTGC	1 cut(s)	1783
AccBSI	CCGCTC	2 cut(s)	1974, 2406
AccI	GTMKAC	2 cut(s)	221, 360
AccII	CGCG	1 cut(s)	317
AccIII	TCCGGA	1 cut(s)	1125
AciI	CCGC	7 cut(s)	176, 317, 542, 989, 1920, 1974, 2404
AclWI	GGATC	6 cut(s)	252, 750, 1193, 1206, 1593, 2339
AcoI	YGGCCR	2 cut(s)	1211, 2401
AcsI	RAATTY	4 cut(s)	292, 1216, 2137, 2143
AcuI	CTGAAG	5 cut(s)	134, 1164, 1245, 1433, 1879
AcvI	CACGTG	1 cut(s)	1103
AcyI	GRCGYC	2 cut(s)	98, 539
AdeI	CACNNNGTG	2 cut(s)	75, 475
AfaI	GTAC	8 cut(s)	17, 643, 1166, 1174, 1325, 1541, 1954, 2368
AfiI	CCNNNNNNNGG	1 cut(s)	344
AflIII	ACRYGT	2 cut(s)	1100, 1102
AgsI	TTSAA	9 cut(s)	292, 1005, 1466, 1628, 1838, 1905, 2010, 2186, 2256
AhlI	ACTAGT	1 cut(s)	638
AjnI	CCWGG	4 cut(s)	343, 384, 1366, 2039
AleI	CACNNNNGTG	1 cut(s)	1101
AloI	GAACNNNNNNTCC	2 cut(s)	846, 878
Alw21I	GWGCWC	1 cut(s)	2288
Alw26I	GTCTC	4 cut(s)	15, 491, 1133, 2314
AlwI	GGATC	6 cut(s)	252, 750, 1193, 1206, 1593, 2339
Aor13HI	TCCGGA	1 cut(s)	1125
AoxI	GGCC	4 cut(s)	373, 1211, 1371, 2401
ApoI	RAATTY	4 cut(s)	292, 1216, 2137, 2143
ArsI	GACNNNNNNTTYG	2 cut(s)	83, 115
Asp700I	GAANNNNTTC	1 cut(s)	561
AspLEI	GCGC	2 cut(s)	148, 317
AspS9I	GGNCC	3 cut(s)	320, 373, 1371
AsuC2I	CCSGG	3 cut(s)	60, 1644, 2422
AsuHPI	GGTGA	4 cut(s)	180, 218, 1277, 2019
AvaII	GGWCC	1 cut(s)	320
AxyI	CCTNAGG	1 cut(s)	1965
BaeI	ACNNNNGTAYC	2 cut(s)	1156, 1189
BalI	TGGCCA	1 cut(s)	1213
BamHI	GGATCC	1 cut(s)	1198
BanII	GRGCYC	1 cut(s)	2288
BauI	CACGAG	1 cut(s)	351
BbrPI	CACGTG	1 cut(s)	1103
BbsI	GAAGAC	2 cut(s)	933, 1439
Bbv12I	GWGCWC	1 cut(s)	2288
BbvCI	CCTCAGC	1 cut(s)	1749
BccI	CCATC	7 cut(s)	88, 1057, 1336, 1729, 1860, 1876, 1882
BceAI	ACGGC	3 cut(s)	189, 642, 922
BcgI	CGANNNNNNTGC	4 cut(s)	371, 405, 761, 795
BciT130I	CCWGG	4 cut(s)	345, 386, 1368, 2041
BclI	TGATCA	1 cut(s)	1525
BcnI	CCSGG	3 cut(s)	60, 1644, 2422
BcoDI	GTCTC	4 cut(s)	15, 491, 1133, 2314
BcuI	ACTAGT	1 cut(s)	638
BfaI	CTAG	7 cut(s)	5, 639, 738, 1044, 1152, 1574, 1935
BfmI	CTRYAG	4 cut(s)	527, 810, 1664, 1712
BfuAI	ACCTGC	1 cut(s)	1783
Bme1390I	CCNGG	7 cut(s)	60, 345, 386, 1368, 1644, 2041, 2422
Bme18I	GGWCC	1 cut(s)	320
BmgT120I	GGNCC	3 cut(s)	320, 373, 1371
BmiI	GGNNCC	3 cut(s)	321, 1200, 1372
BmrFI	CCNGG	7 cut(s)	60, 345, 386, 1368, 1644, 2041, 2422
BmrI	ACTGGG	2 cut(s)	445, 2214
BmuI	ACTGGG	2 cut(s)	445, 2214
BpiI	GAAGAC	2 cut(s)	933, 1439
BpmI	CTGGAG	4 cut(s)	702, 838, 873, 1745
Bpu10I	CCTNAGC	3 cut(s)	723, 1421, 1749
BpuEI	CTTGAG	1 cut(s)	1814
BpuMI	CCSGG	3 cut(s)	60, 1644, 2422
BsaAI	YACGTR	1 cut(s)	1103
BsaBI	GATNNNNATC	1 cut(s)	1530
BsaHI	GRCGYC	2 cut(s)	98, 539
BsaI	GGTCTC	1 cut(s)	15
BsaJI	CCNNGG	7 cut(s)	344, 1037, 1277, 1358, 1367, 1484, 2040
BsaWI	WCCGGW	1 cut(s)	1125
BsaXI	ACNNNNNCTCC	2 cut(s)	846, 876
Bsc4I	CCNNNNNNNGG	1 cut(s)	344
Bse1I	ACTGG	6 cut(s)	451, 702, 1186, 1543, 1995, 2220
Bse21I	CCTNAGG	1 cut(s)	1965
Bse8I	GATNNNNATC	1 cut(s)	1530
BseAI	TCCGGA	1 cut(s)	1125
BseBI	CCWGG	4 cut(s)	345, 386, 1368, 2041
BseDI	CCNNGG	7 cut(s)	344, 1037, 1277, 1358, 1367, 1484, 2040
BseGI	GGATG	5 cut(s)	1122, 1134, 1255, 1494, 1828
BseJI	GATNNNNATC	1 cut(s)	1530
BseLI	CCNNNNNNNGG	1 cut(s)	344
BseMII	CTCAG	7 cut(s)	737, 1044, 1763, 1956, 2010, 2286, 2307
BseNI	ACTGG	6 cut(s)	451, 702, 1186, 1543, 1995, 2220
BseRI	GAGGAG	2 cut(s)	279, 282
BseYI	CCCAGC	2 cut(s)	1433, 2455
BsgI	GTGCAG	4 cut(s)	1811, 1817, 2199, 2352
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	4 cut(s)	375, 1213, 1373, 2403
BsiHKAI	GWGCWC	1 cut(s)	2288
BsiSI	CCGG	4 cut(s)	60, 1126, 1643, 2422
BslFI	GGGAC	5 cut(s)	316, 333, 361, 1731, 2472
BslI	CCNNNNNNNGG	1 cut(s)	344
BsmAI	GTCTC	4 cut(s)	15, 491, 1133, 2314
BsmFI	GGGAC	5 cut(s)	316, 333, 361, 1731, 2472
BsnI	GGCC	4 cut(s)	375, 1213, 1373, 2403
Bso31I	GGTCTC	1 cut(s)	15
Bsp1286I	GDGCHC	1 cut(s)	2288
Bsp13I	TCCGGA	1 cut(s)	1125
Bsp1407I	TGTACA	2 cut(s)	15, 2366
Bsp19I	CCATGG	1 cut(s)	1484
BspACI	CCGC	7 cut(s)	176, 317, 542, 989, 1920, 1974, 2404
BspANI	GGCC	4 cut(s)	375, 1213, 1373, 2403
BspCNI	CTCAG	7 cut(s)	736, 1045, 1762, 1957, 2011, 2285, 2308
BspEI	TCCGGA	1 cut(s)	1125
BspFNI	CGCG	1 cut(s)	317
BspHI	TCATGA	2 cut(s)	247, 2437
BspLI	GGNNCC	3 cut(s)	321, 1200, 1372
BspMAI	CTGCAG	3 cut(s)	531, 1668, 1716
BspMI	ACCTGC	1 cut(s)	1783
BspPI	GGATC	6 cut(s)	252, 750, 1193, 1206, 1593, 2339
BspQI	GCTCTTC	1 cut(s)	2445
BspTNI	GGTCTC	1 cut(s)	15
BsrBI	CCGCTC	2 cut(s)	1974, 2406
BsrGI	TGTACA	2 cut(s)	15, 2366
BsrI	ACTGG	6 cut(s)	451, 702, 1186, 1543, 1995, 2220
BssECI	CCNNGG	7 cut(s)	344, 1037, 1277, 1358, 1367, 1484, 2040
BssNI	GRCGYC	2 cut(s)	98, 539
BssSI	CACGAG	1 cut(s)	351
BssT1I	CCWWGG	4 cut(s)	1037, 1277, 1358, 1484
Bst2BI	CACGAG	1 cut(s)	351
Bst2UI	CCWGG	4 cut(s)	345, 386, 1368, 2041
Bst4CI	ACNGT	7 cut(s)	73, 196, 206, 931, 1024, 1959, 2330
Bst6I	CTCTTC	3 cut(s)	1140, 1381, 2445
BstACI	GRCGYC	2 cut(s)	98, 539
BstAUI	TGTACA	2 cut(s)	15, 2366
BstBAI	YACGTR	1 cut(s)	1103
BstC8I	GCNNGC	7 cut(s)	309, 313, 486, 593, 965, 1680, 2303
BstDSI	CCRYGG	1 cut(s)	1484
BstF5I	GGATG	5 cut(s)	1122, 1134, 1255, 1494, 1828
BstFNI	CGCG	1 cut(s)	317
BstHHI	GCGC	2 cut(s)	148, 317
BstMAI	GTCTC	4 cut(s)	15, 491, 1133, 2314
BstNI	CCWGG	4 cut(s)	345, 386, 1368, 2041
BstNSI	RCATGY	6 cut(s)	311, 488, 967, 1948, 1993, 2305
BstSCI	CCNGG	7 cut(s)	58, 343, 384, 1366, 1642, 2039, 2420
BstSFI	CTRYAG	4 cut(s)	527, 810, 1664, 1712
BstUI	CGCG	1 cut(s)	317
BstV2I	GAAGAC	2 cut(s)	933, 1439
BstX2I	RGATCY	2 cut(s)	742, 1198
BstYI	RGATCY	2 cut(s)	742, 1198
Bsu36I	CCTNAGG	1 cut(s)	1965
BsuRI	GGCC	4 cut(s)	375, 1213, 1373, 2403
BtgI	CCRYGG	1 cut(s)	1484
BtsCI	GGATG	5 cut(s)	1122, 1134, 1255, 1494, 1828
BtsI	GCAGTG	2 cut(s)	524, 2211
BtsIMutI	CAGTG	7 cut(s)	201, 524, 695, 1903, 1955, 2002, 2211
BveI	ACCTGC	1 cut(s)	1783
Cac8I	GCNNGC	7 cut(s)	309, 313, 486, 593, 965, 1680, 2303
CciI	TCATGA	2 cut(s)	247, 2437
CfoI	GCGC	2 cut(s)	148, 317
Cfr13I	GGNCC	3 cut(s)	320, 373, 1371
CseI	GACGC	2 cut(s)	87, 547
CsiI	ACCWGGT	1 cut(s)	384
Csp6I	GTAC	8 cut(s)	16, 642, 1165, 1173, 1324, 1540, 1953, 2367
CspCI	CAANNNNNGTGG	2 cut(s)	435, 470
CviQI	GTAC	8 cut(s)	16, 642, 1165, 1173, 1324, 1540, 1953, 2367
DraI	TTTAAA	1 cut(s)	2142
DraIII	CACNNNGTG	2 cut(s)	75, 475
DrdI	GACNNNNNNGTC	3 cut(s)	1147, 1353, 2123
DseDI	GACNNNNNNGTC	3 cut(s)	1147, 1353, 2123
EaeI	YGGCCR	2 cut(s)	1211, 2401
Eam1104I	CTCTTC	3 cut(s)	1140, 1381, 2445
EarI	CTCTTC	3 cut(s)	1140, 1381, 2445
Ecl136II	GAGCTC	1 cut(s)	2286
Eco130I	CCWWGG	4 cut(s)	1037, 1277, 1358, 1484
Eco24I	GRGCYC	1 cut(s)	2288
Eco31I	GGTCTC	1 cut(s)	15
Eco47I	GGWCC	1 cut(s)	320
Eco53kI	GAGCTC	1 cut(s)	2286
Eco57I	CTGAAG	5 cut(s)	134, 1164, 1245, 1433, 1879
Eco72I	CACGTG	1 cut(s)	1103
Eco81I	CCTNAGG	1 cut(s)	1965
EcoICRI	GAGCTC	1 cut(s)	2286
EcoO109I	RGGNCCY	2 cut(s)	320, 1371
EcoRI	GAATTC	1 cut(s)	292
EcoRII	CCWGG	4 cut(s)	343, 384, 1366, 2039
EcoT14I	CCWWGG	4 cut(s)	1037, 1277, 1358, 1484
EcoT22I	ATGCAT	2 cut(s)	486, 969
EcoT38I	GRGCYC	1 cut(s)	2288
ErhI	CCWWGG	4 cut(s)	1037, 1277, 1358, 1484
FalI	AAGNNNNNCTT	2 cut(s)	272, 304
FaqI	GGGAC	5 cut(s)	316, 333, 361, 1731, 2472
FauI	CCCGC	1 cut(s)	310
FbaI	TGATCA	1 cut(s)	1525
FblI	GTMKAC	2 cut(s)	221, 360
FokI	GGATG	5 cut(s)	1129, 1141, 1262, 1501, 1835
FriOI	GRGCYC	1 cut(s)	2288
FspBI	CTAG	7 cut(s)	5, 639, 738, 1044, 1152, 1574, 1935
GlaI	GCGC	2 cut(s)	147, 316
GsaI	CCCAGC	2 cut(s)	1437, 2459
GsuI	CTGGAG	4 cut(s)	702, 838, 873, 1745
HaeIII	GGCC	4 cut(s)	375, 1213, 1373, 2403
HapII	CCGG	4 cut(s)	60, 1126, 1643, 2422
HgaI	GACGC	2 cut(s)	87, 547
HhaI	GCGC	2 cut(s)	148, 317
Hin1I	GRCGYC	2 cut(s)	98, 539
Hin6I	GCGC	2 cut(s)	146, 315
HinP1I	GCGC	2 cut(s)	146, 315
HincII	GTYRAC	2 cut(s)	222, 1257
HindII	GTYRAC	2 cut(s)	222, 1257
HpaII	CCGG	4 cut(s)	60, 1126, 1643, 2422
HphI	GGTGA	4 cut(s)	180, 218, 1277, 2019
Hpy166II	GTNNAC	6 cut(s)	222, 361, 644, 1257, 1955, 2383
Hpy188III	TCNNGA	8 cut(s)	248, 725, 1126, 1820, 1964, 2193, 2274, 2438
Hpy8I	GTNNAC	6 cut(s)	222, 361, 644, 1257, 1955, 2383
Hpy99I	CGWCG	3 cut(s)	46, 103, 672
HpyAV	CCTTC	5 cut(s)	35, 109, 245, 1155, 1352
HpyCH4III	ACNGT	7 cut(s)	73, 196, 206, 931, 1024, 1959, 2330
HpyCH4IV	ACGT	2 cut(s)	1102, 1354
HpySE526I	ACGT	2 cut(s)	1102, 1354
Hsp92I	GRCGYC	2 cut(s)	98, 539
HspAI	GCGC	2 cut(s)	146, 315
Kpn2I	TCCGGA	1 cut(s)	1125
Ksp22I	TGATCA	1 cut(s)	1525
LguI	GCTCTTC	1 cut(s)	2445
LmnI	GCTCC	6 cut(s)	298, 471, 1430, 1438, 1854, 1971
MabI	ACCWGGT	1 cut(s)	384
MaeI	CTAG	7 cut(s)	5, 639, 738, 1044, 1152, 1574, 1935
MaeII	ACGT	2 cut(s)	1102, 1354
MaeIII	GTNAC	5 cut(s)	186, 206, 475, 1190, 2025
MbiI	CCGCTC	2 cut(s)	1974, 2406
MfeI	CAATTG	2 cut(s)	2362, 2409
MflI	RGATCY	2 cut(s)	742, 1198
MhlI	GDGCHC	1 cut(s)	2288
MlsI	TGGCCA	1 cut(s)	1213
MluNI	TGGCCA	1 cut(s)	1213
MlyI	GAGTC	4 cut(s)	343, 1157, 1262, 1867
MmeI	TCCRAC	2 cut(s)	2106, 2466
Mox20I	TGGCCA	1 cut(s)	1213
Mph1103I	ATGCAT	2 cut(s)	486, 969
MroI	TCCGGA	1 cut(s)	1125
MroXI	GAANNNNTTC	1 cut(s)	561
MscI	TGGCCA	1 cut(s)	1213
MseI	TTAA	6 cut(s)	1083, 1412, 1773, 2106, 2141, 2178
MslI	CAYNNNNRTG	4 cut(s)	92, 489, 1101, 2255
Msp20I	TGGCCA	1 cut(s)	1213
MspA1I	CMGCKG	1 cut(s)	986
MspI	CCGG	4 cut(s)	60, 1126, 1643, 2422
MspR9I	CCNGG	7 cut(s)	60, 345, 386, 1368, 1644, 2041, 2422
MunI	CAATTG	2 cut(s)	2362, 2409
MvaI	CCWGG	4 cut(s)	345, 386, 1368, 2041
MvnI	CGCG	1 cut(s)	317
NciI	CCSGG	3 cut(s)	60, 1644, 2422
NcoI	CCATGG	1 cut(s)	1484
NlaIV	GGNNCC	3 cut(s)	321, 1200, 1372
NmeAIII	GCCGAG	1 cut(s)	703
NmuCI	GTSAC	5 cut(s)	186, 206, 475, 1190, 2025
NsiI	ATGCAT	2 cut(s)	486, 969
NspI	RCATGY	6 cut(s)	311, 488, 967, 1948, 1993, 2305
OliI	CACNNNNGTG	1 cut(s)	1101
PaeI	GCATGC	4 cut(s)	311, 488, 967, 2305
PagI	TCATGA	2 cut(s)	247, 2437
PaqCI	CACCTGC	1 cut(s)	1783
PciSI	GCTCTTC	1 cut(s)	2445
PcsI	WCGNNNNNNNCGW	4 cut(s)	77, 86, 95, 1351
PdmI	GAANNNNTTC	1 cut(s)	561
PflFI	GACNNNGTC	1 cut(s)	2233
PleI	GAGTC	4 cut(s)	343, 1156, 1261, 1866
PmaCI	CACGTG	1 cut(s)	1103
PmlI	CACGTG	1 cut(s)	1103
PpsI	GAGTC	4 cut(s)	343, 1156, 1261, 1866
Ppu21I	YACGTR	1 cut(s)	1103
PpuMI	RGGWCCY	1 cut(s)	320
PsiI	TTATAA	1 cut(s)	1032
Psp124BI	GAGCTC	1 cut(s)	2288
Psp5II	RGGWCCY	1 cut(s)	320
Psp6I	CCWGG	4 cut(s)	343, 384, 1366, 2039
PspCI	CACGTG	1 cut(s)	1103
PspFI	CCCAGC	2 cut(s)	1433, 2455
PspGI	CCWGG	4 cut(s)	343, 384, 1366, 2039
PspN4I	GGNNCC	3 cut(s)	321, 1200, 1372
PspPI	GGNCC	3 cut(s)	320, 373, 1371
PspPPI	RGGWCCY	1 cut(s)	320
PstI	CTGCAG	3 cut(s)	531, 1668, 1716
PsuI	RGATCY	2 cut(s)	742, 1198
PsyI	GACNNNGTC	1 cut(s)	2233
PvuII	CAGCTG	1 cut(s)	986
RsaI	GTAC	8 cut(s)	17, 643, 1166, 1174, 1325, 1541, 1954, 2368
RsaNI	GTAC	8 cut(s)	16, 642, 1165, 1173, 1324, 1540, 1953, 2367
RseI	CAYNNNNRTG	4 cut(s)	92, 489, 1101, 2255
SacI	GAGCTC	1 cut(s)	2288
SalI	GTCGAC	1 cut(s)	220
SapI	GCTCTTC	1 cut(s)	2445
SaqAI	TTAA	6 cut(s)	1083, 1412, 1773, 2106, 2141, 2178
Sau96I	GGNCC	3 cut(s)	320, 373, 1371
SbfI	CCTGCAGG	1 cut(s)	1716
SchI	GAGTC	4 cut(s)	343, 1157, 1262, 1867
ScrFI	CCNGG	7 cut(s)	60, 345, 386, 1368, 1644, 2041, 2422
SdaI	CCTGCAGG	1 cut(s)	1716
SduI	GDGCHC	1 cut(s)	2288
SexAI	ACCWGGT	1 cut(s)	384
SfcI	CTRYAG	4 cut(s)	527, 810, 1664, 1712
SinI	GGWCC	1 cut(s)	320
SmiI	ATTTAAAT	1 cut(s)	2142
SmiMI	CAYNNNNRTG	4 cut(s)	92, 489, 1101, 2255
SmlI	CTYRAG	1 cut(s)	1829
SmoI	CTYRAG	1 cut(s)	1829
SpeI	ACTAGT	1 cut(s)	638
SphI	GCATGC	4 cut(s)	311, 488, 967, 2305
Sse8387I	CCTGCAGG	1 cut(s)	1716
SsiI	CCGC	7 cut(s)	176, 317, 542, 989, 1920, 1974, 2404
SspI	AATATT	1 cut(s)	2182
SspMI	CTAG	7 cut(s)	5, 639, 738, 1044, 1152, 1574, 1935
SstI	GAGCTC	1 cut(s)	2288
StyD4I	CCNGG	7 cut(s)	58, 343, 384, 1366, 1642, 2039, 2420
StyI	CCWWGG	4 cut(s)	1037, 1277, 1358, 1484
SwaI	ATTTAAAT	1 cut(s)	2142
TaaI	ACNGT	7 cut(s)	73, 196, 206, 931, 1024, 1959, 2330
TaiI	ACGT	2 cut(s)	1105, 1357
TaqI	TCGA	9 cut(s)	41, 80, 221, 781, 919, 1345, 1508, 1733, 2127
TatI	WGTACW	3 cut(s)	15, 641, 2366
TauI	GCSGC	3 cut(s)	544, 992, 2406
Tru1I	TTAA	6 cut(s)	1083, 1412, 1773, 2106, 2141, 2178
Tru9I	TTAA	6 cut(s)	1083, 1412, 1773, 2106, 2141, 2178
TscAI	CASTG	7 cut(s)	201, 531, 702, 1903, 1962, 2002, 2218
TseFI	GTSAC	5 cut(s)	186, 206, 475, 1190, 2025
Tsp45I	GTSAC	5 cut(s)	186, 206, 475, 1190, 2025
TspDTI	ATGAA	7 cut(s)	227, 264, 519, 894, 1413, 1472, 1857
TspGWI	ACGGA	1 cut(s)	663
TspRI	CASTG	7 cut(s)	201, 531, 702, 1903, 1962, 2002, 2218
Tth111I	GACNNNGTC	1 cut(s)	2233
VpaK11BI	GGWCC	1 cut(s)	320
XapI	RAATTY	4 cut(s)	292, 1216, 2137, 2143
XceI	RCATGY	6 cut(s)	311, 488, 967, 1948, 1993, 2305
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1221
XmiI	GTMKAC	2 cut(s)	221, 360
XmnI	GAANNNNTTC	1 cut(s)	561
XspI	CTAG	7 cut(s)	5, 639, 738, 1044, 1152, 1574, 1935
Zsp2I	ATGCAT	2 cut(s)	486, 969

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.