Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009101.1

Orthogroup ID

OG0007603

Physical Location & Seq

Genomic Coordinates Reverse (-)

43449 .. 52939

Gene Structure 9491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009101.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2547 bp

atggttctgcggagggaagggtttcctccatttggggcttcaatttggatttggaacaatctcaatttcgtcgagtatgatgatggtggaatagtaagtaagaaattaatagagaggaaggcgaagcttattgatattgatatgaagctttccacatcagggttcggtcggcaggaccaagaaggaggaggaggaggagcggagaagaagtgcttgaattcggagctatggcatgcatgcgcagggcctctggtgtcgctgccgacgtctgggagtcgagtggtttactttcctcagggccacagtgaccaggttgctgctactactaacaaacaagttgatgctcacataccaaactacccggccttgcctccccagttgatctgtcagctccacaatgtcacaatgcatgcagatgtggagacggatgaagtatatgcccagatgacgttgcagcctttgactccgcaagaacaaaaggaaacatttcttcccatggagttgggaattccaagcaagcaaccgacaaattacttttgcaagacactcacggcgagtgacactagtacacacggaggcttctctgtccctcgtcgcgccgctgagaaagtgtttcctccactggatttctcgctacagccaccagcccaggaacttattgctagggatctccatgatgttgagtggaagtttaggcacatttttcgaggacagccaaaacggcatcttcttacgacaggttggagtgtgtttgttagtgccaaaaggcttgttgcaggagattctgttctttttatttggaatgaaaagaatcagctccttttgggaattcgccgtgcaactcgaccacaaactgtgatgccatcatctgttctgtcaagtgatagcatgcacattggacttcttgctgctgccgcccatgcgtcttcaactaatagctggctagtccatctgagtttgtcatatagggctgccacttggtttggtaattaccaaaccgaccgaataccaaccgatattttaagtttggttggttgggatgagtcaaccgcaggtgagaggcagccaagggtttcgttgtgggagattgagcctttgaccactttccccatgtacccatcactgtttccccttcgactgaagcgtccttggcatcctggggcatcatcaatgcatgataacagagatgaagcagctaatagcttaatgtggctaaggggtggaactggagagcaaggtcttcaatccatgaacttccaagctgttggtatgtttccttggatgcagcagagattggattcaacatttatgggaaatgaccccagtcagcagtaccaggccatgttggctgctggtttacaaaatataggaagtggtgatcagctacgacaacatgtaatgcacttccagcagcctcttcagtaccttcagcagccgggtagccacaatcctctgttgcagctgcaacagcaagtaattccgcaatcagtccctcataatatgctgcaggcgcaaccacaagtttcaatggagaatctgcctcagcaacttctaccaccacaatttaacaatcaaacagaggaagagccgcagcaacagcacaacacctatcatgatgcacgtaaggttcaaagagaacaactccatcagagtcagcaaatgaatttgccatctccatcattttccaaaacggactttgctgattcaagcacaaagttgtcagggtctactacctctagacagaacacgcttggttcactgtgtcctgaagggaataataatcttttgaacatctccagagctggtcattctttgccagctgagcagttacctcaacaatcctgggctccaaagtttgcatatgcgcaggccaatgactttgctaacccattgtcattcacaccttttgatgagaaagacaatgcagttgagcaagagaactgtaattcagattcccagaatcctactctttttggtgttaatatagaatcatctgggcttgtattccccaccacagtgccgaactttgccacttcttcaaatgatgctgacatgccaatgcctttaggggattctggatttcagagttctctgtatggttgcatgcaaggttcatctgagttgttgcacggtgcaggtcaagttgacccaccaaccccaaactgtacatttgtcaaggtgtataagtcagggtcggttggccgctcactggacatttcccggttcagcagctataatcagctgcgggaagaactggcccagatgtttggcattgaggggaagttggaagattgtcttagatcaggctggcagcttgtattcgtcgacagggagaacgatgtgcttcttcttggagacgacccatgggagtcatttgtgaacaacgtttggtatatcaagatactttctcctgaggatgtgcacaaaatgggcgaccaagcagttgaatcctttagcccaaatgtgggtcaaaggttgaatagcagtggaaatgaaactcaagaccatatatctgggctaccatctctcggctcacttgagtattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0009908 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

848

Amino Acids

94.4

Weight (kDa)

5.49

Isoelectric Point (pI)

62.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37020 AT5G37020 AT5G37020
fragaria_vesca	FvH4_1g27650 FvH4_1g27650 FvH4_1g27650
malus_domestica	MD09G1282200.v1.1 MD17G1272200.v1.1
prunus_persica	Prupe.3G011800_v2.0.a1
pyrus_communis	pycom09g19010 pycom17g27100
rosa_chinensis	RchiOBHm_Chr3g0487771
rosa_laevigata	RLG00000022974
rosa_multiflora	Rmu_sc0009101.1_g000014 Rmu_sc0040239.1_g000002 Rmu_sc0040567.1_g000004
rosa_roxburghii	Rroxscaffold_6G00394490
rosa_rugosa	Rorug03G0236300 Rorug03G0236400
rosa_samantha	Rh3AG284500 Rh3BG321300 Rh3CG319700 Rh3DG318200
rosa_wichuraiana	Rw3G025230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1043
AasI	GACNNNNNNGTC	1 cut(s)	1143
AatII	GACGTC	1 cut(s)	269
Acc16I	TGCGCA	2 cut(s)	241, 1866
Acc36I	ACCTGC	2 cut(s)	1043, 2126
AccBSI	CCGCTC	2 cut(s)	200, 2205
AccI	GTMKAC	2 cut(s)	1727, 2325
AccII	CGCG	1 cut(s)	597
AclI	AACGTT	1 cut(s)	2385
AclWI	GGATC	1 cut(s)	675
AcoI	YGGCCR	1 cut(s)	2200
AcsI	RAATTY	4 cut(s)	217, 507, 828, 1663
AcuI	CTGAAG	4 cut(s)	1160, 1403, 1412, 1788
AcyI	GRCGYC	1 cut(s)	266
AfaI	GTAC	5 cut(s)	568, 1115, 1334, 1424, 2167
AfiI	CCNNNNNNNGG	7 cut(s)	32, 159, 269, 2209, 2464, 2465, 2528
AflIII	ACRYGT	1 cut(s)	1393
AhlI	ACTAGT	1 cut(s)	563
AjnI	CCWGG	5 cut(s)	309, 648, 1156, 1335, 1841
AleI	CACNNNNGTG	1 cut(s)	2015
AloI	GAACNNNNNNTCC	2 cut(s)	771, 803
Alw21I	GWGCWC	1 cut(s)	2424
Alw26I	GTCTC	2 cut(s)	416, 2349
Alw44I	GTGCAC	1 cut(s)	2420
AlwI	GGATC	1 cut(s)	675
AoxI	GGCC	7 cut(s)	245, 298, 363, 1338, 1869, 2200, 2256
ApaLI	GTGCAC	1 cut(s)	2420
ApoI	RAATTY	4 cut(s)	217, 507, 828, 1663
AseI	ATTAAT	1 cut(s)	107
Asp700I	GAANNNNTTC	2 cut(s)	21, 486
AspLEI	GCGC	4 cut(s)	242, 599, 1513, 1867
AspS9I	GGNCC	4 cut(s)	175, 245, 298, 2257
AsuC2I	CCSGG	3 cut(s)	362, 1437, 2221
AsuHPI	GGTGA	2 cut(s)	1067, 1388
AvaII	GGWCC	1 cut(s)	175
AxyI	CCTNAGG	2 cut(s)	294, 2412
BaeGI	GKGCMC	1 cut(s)	2424
BanII	GRGCYC	1 cut(s)	1849
BbsI	GAAGAC	2 cut(s)	918, 1232
Bbv12I	GWGCWC	1 cut(s)	2424
BbvCI	CCTCAGC	1 cut(s)	1542
BccI	CCATC	8 cut(s)	77, 871, 957, 1126, 1653, 1678, 1684, 2530
BceAI	ACGGC	3 cut(s)	567, 737, 819
BcgI	CGANNNNNNTGC	2 cut(s)	686, 720
BciT130I	CCWGG	5 cut(s)	311, 650, 1158, 1337, 1843
BclI	TGATCA	1 cut(s)	1378
BcnI	CCSGG	3 cut(s)	362, 1437, 2221
BcoDI	GTCTC	2 cut(s)	416, 2349
BcuI	ACTAGT	1 cut(s)	563
BfaI	CTAG	4 cut(s)	564, 663, 944, 1737
BfmI	CTRYAG	2 cut(s)	635, 1505
BfuAI	ACCTGC	2 cut(s)	1043, 2126
BglI	GCCNNNNNGGC	2 cut(s)	721, 1346
BlpI	GCTNAGC	1 cut(s)	1821
Bme1390I	CCNGG	8 cut(s)	311, 362, 650, 1158, 1337, 1437, 1843, 2221
Bme18I	GGWCC	1 cut(s)	175
BmgT120I	GGNCC	4 cut(s)	175, 245, 298, 2257
BmiI	GGNNCC	1 cut(s)	1848
BmrFI	CCNGG	8 cut(s)	311, 362, 650, 1158, 1337, 1437, 1843, 2221
BmrI	ACTGGG	2 cut(s)	370, 1317
BmsI	GCATC	8 cut(s)	331, 733, 849, 1162, 1172, 1272, 1606, 2035
BmuI	ACTGGG	2 cut(s)	370, 1317
BoxI	GACNNNNGTC	1 cut(s)	1323
BpiI	GAAGAC	2 cut(s)	918, 1232
BplI	GAGNNNNNCTC	2 cut(s)	1626, 1658
BpmI	CTGGAG	2 cut(s)	1248, 1780
Bpu10I	CCTNAGC	2 cut(s)	1214, 1542
Bpu1102I	GCTNAGC	1 cut(s)	1821
BpuEI	CTTGAG	1 cut(s)	2484
BpuMI	CCSGG	3 cut(s)	362, 1437, 2221
BsaAI	YACGTR	1 cut(s)	1622
BsaHI	GRCGYC	1 cut(s)	266
BsaJI	CCNNGG	8 cut(s)	495, 648, 1067, 1148, 1157, 1277, 1842, 2363
BsaXI	ACNNNNNCTCC	4 cut(s)	194, 224, 771, 801
Bsc4I	CCNNNNNNNGG	7 cut(s)	32, 159, 269, 2209, 2464, 2465, 2528
Bse1I	ACTGG	6 cut(s)	376, 627, 1231, 1323, 2214, 2259
Bse21I	CCTNAGG	2 cut(s)	294, 2412
BseBI	CCWGG	5 cut(s)	311, 650, 1158, 1337, 1843
BseDI	CCNNGG	8 cut(s)	495, 648, 1067, 1148, 1157, 1277, 1842, 2363
BseGI	GGATG	5 cut(s)	433, 1045, 1153, 1287, 2422
BseLI	CCNNNNNNNGG	7 cut(s)	32, 159, 269, 2209, 2464, 2465, 2528
BseMII	CTCAG	7 cut(s)	308, 594, 944, 1556, 1812, 2109, 2403
BseNI	ACTGG	6 cut(s)	376, 627, 1231, 1323, 2214, 2259
BseRI	GAGGAG	4 cut(s)	201, 204, 207, 210
BseSI	GKGCMC	1 cut(s)	2424
BsgI	GTGCAG	1 cut(s)	2154
Bsh1236I	CGCG	1 cut(s)	597
Bsh1285I	CGRYCG	2 cut(s)	169, 1003
BshFI	GGCC	7 cut(s)	247, 300, 365, 1340, 1871, 2202, 2258
BsiEI	CGRYCG	2 cut(s)	169, 1003
BsiHKAI	GWGCWC	1 cut(s)	2424
BsiSI	CCGG	3 cut(s)	362, 1436, 2221
BslFI	GGGAC	2 cut(s)	572, 1475
BslI	CCNNNNNNNGG	7 cut(s)	32, 159, 269, 2209, 2464, 2465, 2528
BsmAI	GTCTC	2 cut(s)	416, 2349
BsmBI	CGTCTC	2 cut(s)	416, 2349
BsmFI	GGGAC	2 cut(s)	572, 1475
BsnI	GGCC	7 cut(s)	247, 300, 365, 1340, 1871, 2202, 2258
Bsp1286I	GDGCHC	2 cut(s)	1849, 2424
Bsp1407I	TGTACA	1 cut(s)	2165
Bsp143I	GATC	4 cut(s)	381, 667, 1378, 2300
Bsp1720I	GCTNAGC	1 cut(s)	1821
Bsp19I	CCATGG	2 cut(s)	495, 2363
BspANI	GGCC	7 cut(s)	247, 300, 365, 1340, 1871, 2202, 2258
BspCNI	CTCAG	7 cut(s)	307, 595, 945, 1555, 1813, 2110, 2404
BspFNI	CGCG	1 cut(s)	597
BspHI	TCATGA	1 cut(s)	1612
BspLI	GGNNCC	1 cut(s)	1848
BspMAI	CTGCAG	1 cut(s)	1509
BspMI	ACCTGC	2 cut(s)	1043, 2126
BspPI	GGATC	1 cut(s)	675
BspQI	GCTCTTC	1 cut(s)	1578
BsrBI	CCGCTC	2 cut(s)	200, 2205
BsrGI	TGTACA	1 cut(s)	2165
BsrI	ACTGG	6 cut(s)	376, 627, 1231, 1323, 2214, 2259
BssECI	CCNNGG	8 cut(s)	495, 648, 1067, 1148, 1157, 1277, 1842, 2363
BssMI	GATC	4 cut(s)	381, 667, 1378, 2300
BssNI	GRCGYC	1 cut(s)	266
BssT1I	CCWWGG	5 cut(s)	495, 1067, 1148, 1277, 2363
Bst2UI	CCWGG	5 cut(s)	311, 650, 1158, 1337, 1843
Bst4CI	ACNGT	8 cut(s)	305, 856, 1125, 1761, 1943, 2017, 2132, 2165
Bst6I	CTCTTC	2 cut(s)	1422, 1578
BstACI	GRCGYC	1 cut(s)	266
BstAUI	TGTACA	1 cut(s)	2165
BstBAI	YACGTR	1 cut(s)	1622
BstDEI	CTNAG	9 cut(s)	294, 603, 953, 1214, 1542, 1821, 2118, 2297, 2412
BstDSI	CCRYGG	2 cut(s)	495, 2363
BstF5I	GGATG	5 cut(s)	433, 1045, 1153, 1287, 2422
BstFNI	CGCG	1 cut(s)	597
BstHHI	GCGC	4 cut(s)	242, 599, 1513, 1867
BstKTI	GATC	4 cut(s)	384, 670, 1381, 2303
BstMAI	GTCTC	2 cut(s)	416, 2349
BstMBI	GATC	4 cut(s)	381, 667, 1378, 2300
BstMCI	CGRYCG	2 cut(s)	169, 1003
BstNI	CCWGG	5 cut(s)	311, 650, 1158, 1337, 1843
BstNSI	RCATGY	7 cut(s)	236, 240, 413, 892, 1397, 2056, 2107
BstPAI	GACNNNNGTC	1 cut(s)	1323
BstSCI	CCNGG	8 cut(s)	309, 360, 648, 1156, 1335, 1435, 1841, 2219
BstSFI	CTRYAG	2 cut(s)	635, 1505
BstSLI	GKGCMC	1 cut(s)	2424
BstUI	CGCG	1 cut(s)	597
BstV2I	GAAGAC	2 cut(s)	918, 1232
BstX2I	RGATCY	1 cut(s)	667
BstXI	CCANNNNNNTGG	4 cut(s)	502, 1265, 2267, 2513
BstYI	RGATCY	1 cut(s)	667
Bsu36I	CCTNAGG	2 cut(s)	294, 2412
BsuRI	GGCC	7 cut(s)	247, 300, 365, 1340, 1871, 2202, 2258
BtgI	CCRYGG	2 cut(s)	495, 2363
BtsCI	GGATG	5 cut(s)	433, 1045, 1153, 1287, 2422
BtsI	GCAGTG	1 cut(s)	2491
BtsIMutI	CAGTG	7 cut(s)	310, 620, 1121, 1757, 2022, 2207, 2491
BveI	ACCTGC	2 cut(s)	1043, 2126
CciI	TCATGA	1 cut(s)	1612
CfoI	GCGC	4 cut(s)	242, 599, 1513, 1867
Cfr13I	GGNCC	4 cut(s)	175, 245, 298, 2257
CseI	GACGC	2 cut(s)	912, 1133
CsiI	ACCWGGT	1 cut(s)	309
Csp6I	GTAC	5 cut(s)	567, 1114, 1333, 1423, 2166
CspCI	CAANNNNNGTGG	2 cut(s)	964, 999
CviQI	GTAC	5 cut(s)	567, 1114, 1333, 1423, 2166
DdeI	CTNAG	9 cut(s)	294, 603, 953, 1214, 1542, 1821, 2118, 2297, 2412
DpnI	GATC	4 cut(s)	383, 669, 1380, 2302
DpnII	GATC	4 cut(s)	381, 667, 1378, 2300
DrdI	GACNNNNNNGTC	1 cut(s)	1143
DseDI	GACNNNNNNGTC	1 cut(s)	1143
EaeI	YGGCCR	1 cut(s)	2200
Eam1104I	CTCTTC	2 cut(s)	1422, 1578
EarI	CTCTTC	2 cut(s)	1422, 1578
Eco130I	CCWWGG	5 cut(s)	495, 1067, 1148, 1277, 2363
Eco24I	GRGCYC	1 cut(s)	1849
Eco47I	GGWCC	1 cut(s)	175
Eco57I	CTGAAG	4 cut(s)	1160, 1403, 1412, 1788
Eco81I	CCTNAGG	2 cut(s)	294, 2412
EcoO109I	RGGNCCY	1 cut(s)	245
EcoRI	GAATTC	3 cut(s)	217, 507, 828
EcoRII	CCWGG	5 cut(s)	309, 648, 1156, 1335, 1841
EcoT14I	CCWWGG	5 cut(s)	495, 1067, 1148, 1277, 2363
EcoT22I	ATGCAT	3 cut(s)	238, 411, 1176
EcoT38I	GRGCYC	1 cut(s)	1849
ErhI	CCWWGG	5 cut(s)	495, 1067, 1148, 1277, 2363
Esp3I	CGTCTC	2 cut(s)	416, 2349
FalI	AAGNNNNNCTT	4 cut(s)	197, 229, 2280, 2312
FaqI	GGGAC	2 cut(s)	572, 1475
FauI	CCCGC	1 cut(s)	2238
FauNDI	CATATG	1 cut(s)	1861
FbaI	TGATCA	1 cut(s)	1378
FblI	GTMKAC	2 cut(s)	1727, 2325
FokI	GGATG	5 cut(s)	440, 1052, 1140, 1294, 2429
FriOI	GRGCYC	1 cut(s)	1849
FspBI	CTAG	4 cut(s)	564, 663, 944, 1737
FspI	TGCGCA	2 cut(s)	241, 1866
GlaI	GCGC	4 cut(s)	241, 598, 1512, 1866
GsuI	CTGGAG	2 cut(s)	1248, 1780
HaeIII	GGCC	7 cut(s)	247, 300, 365, 1340, 1871, 2202, 2258
HapII	CCGG	3 cut(s)	362, 1436, 2221
HgaI	GACGC	2 cut(s)	912, 1133
HhaI	GCGC	4 cut(s)	242, 599, 1513, 1867
Hin1I	GRCGYC	1 cut(s)	266
Hin6I	GCGC	4 cut(s)	240, 597, 1511, 1865
HinP1I	GCGC	4 cut(s)	240, 597, 1511, 1865
HincII	GTYRAC	3 cut(s)	1047, 2146, 2326
HindII	GTYRAC	3 cut(s)	1047, 2146, 2326
HindIII	AAGCTT	2 cut(s)	125, 146
HpaII	CCGG	3 cut(s)	362, 1436, 2221
HphI	GGTGA	2 cut(s)	1067, 1388
Hpy188I	TCNGA	6 cut(s)	223, 954, 1650, 1951, 2085, 2119
Hpy188III	TCNNGA	8 cut(s)	1613, 1737, 1766, 1797, 2076, 2398, 2411, 2501
Hpy99I	CGWCG	4 cut(s)	74, 268, 597, 2327
HpyAV	CCTTC	6 cut(s)	11, 112, 176, 1142, 1436, 1763
HpyCH4III	ACNGT	8 cut(s)	305, 856, 1125, 1761, 1943, 2017, 2132, 2165
HpyCH4IV	ACGT	4 cut(s)	266, 449, 1621, 2385
HpyF3I	CTNAG	9 cut(s)	294, 603, 953, 1214, 1542, 1821, 2118, 2297, 2412
HpySE526I	ACGT	4 cut(s)	266, 449, 1621, 2385
Hsp92I	GRCGYC	1 cut(s)	266
HspAI	GCGC	4 cut(s)	240, 597, 1511, 1865
Ksp22I	TGATCA	1 cut(s)	1378
Kzo9I	GATC	4 cut(s)	381, 667, 1378, 2300
LguI	GCTCTTC	1 cut(s)	1578
LmnI	GCTCC	5 cut(s)	197, 223, 396, 822, 1852
LweI	GCATC	8 cut(s)	331, 733, 849, 1162, 1172, 1272, 1606, 2035
MabI	ACCWGGT	1 cut(s)	309
MaeI	CTAG	4 cut(s)	564, 663, 944, 1737
MaeII	ACGT	4 cut(s)	266, 449, 1621, 2385
MaeIII	GTNAC	4 cut(s)	305, 400, 557, 1827
MalI	GATC	4 cut(s)	383, 669, 1380, 2302
MbiI	CCGCTC	2 cut(s)	200, 2205
MboI	GATC	4 cut(s)	381, 667, 1378, 2300
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	2 cut(s)	1849, 2424
MlyI	GAGTC	5 cut(s)	283, 457, 1052, 1660, 2378
MmeI	TCCRAC	2 cut(s)	722, 2265
Mph1103I	ATGCAT	3 cut(s)	238, 411, 1176
MroXI	GAANNNNTTC	2 cut(s)	21, 486
MseI	TTAA	5 cut(s)	107, 1022, 1205, 1566, 1980
MslI	CAYNNNNRTG	3 cut(s)	414, 2015, 2057
MspA1I	CMGCKG	4 cut(s)	602, 1462, 1820, 2242
MspI	CCGG	3 cut(s)	362, 1436, 2221
MspR9I	CCNGG	8 cut(s)	311, 362, 650, 1158, 1337, 1437, 1843, 2221
MvaI	CCWGG	5 cut(s)	311, 650, 1158, 1337, 1843
MvnI	CGCG	1 cut(s)	597
NciI	CCSGG	3 cut(s)	362, 1437, 2221
NcoI	CCATGG	2 cut(s)	495, 2363
NdeI	CATATG	1 cut(s)	1861
NdeII	GATC	4 cut(s)	381, 667, 1378, 2300
NlaIV	GGNNCC	1 cut(s)	1848
NmeAIII	GCCGAG	1 cut(s)	2508
NmuCI	GTSAC	3 cut(s)	305, 400, 557
NsbI	TGCGCA	2 cut(s)	241, 1866
NsiI	ATGCAT	3 cut(s)	238, 411, 1176
NspI	RCATGY	7 cut(s)	236, 240, 413, 892, 1397, 2056, 2107
OliI	CACNNNNGTG	1 cut(s)	2015
PaeI	GCATGC	5 cut(s)	236, 240, 413, 892, 2107
PagI	TCATGA	1 cut(s)	1612
PaqCI	CACCTGC	1 cut(s)	1043
PciI	ACATGT	1 cut(s)	1393
PciSI	GCTCTTC	1 cut(s)	1578
PcsI	WCGNNNNNNNCGW	2 cut(s)	263, 1141
PdmI	GAANNNNTTC	2 cut(s)	21, 486
PleI	GAGTC	5 cut(s)	282, 457, 1051, 1659, 2377
PpsI	GAGTC	5 cut(s)	282, 457, 1051, 1659, 2377
Ppu21I	YACGTR	1 cut(s)	1622
PscI	ACATGT	1 cut(s)	1393
PshAI	GACNNNNGTC	1 cut(s)	1323
PshBI	ATTAAT	1 cut(s)	107
Psp1406I	AACGTT	1 cut(s)	2385
Psp6I	CCWGG	5 cut(s)	309, 648, 1156, 1335, 1841
PspGI	CCWGG	5 cut(s)	309, 648, 1156, 1335, 1841
PspN4I	GGNNCC	1 cut(s)	1848
PspPI	GGNCC	4 cut(s)	175, 245, 298, 2257
PstI	CTGCAG	1 cut(s)	1509
PsuI	RGATCY	1 cut(s)	667
PvuII	CAGCTG	3 cut(s)	1462, 1820, 2242
RsaI	GTAC	5 cut(s)	568, 1115, 1334, 1424, 2167
RsaNI	GTAC	5 cut(s)	567, 1114, 1333, 1423, 2166
RseI	CAYNNNNRTG	3 cut(s)	414, 2015, 2057
SalI	GTCGAC	1 cut(s)	2324
SapI	GCTCTTC	1 cut(s)	1578
SaqAI	TTAA	5 cut(s)	107, 1022, 1205, 1566, 1980
Sau3AI	GATC	4 cut(s)	381, 667, 1378, 2300
Sau96I	GGNCC	4 cut(s)	175, 245, 298, 2257
SchI	GAGTC	5 cut(s)	283, 457, 1052, 1660, 2378
ScrFI	CCNGG	8 cut(s)	311, 362, 650, 1158, 1337, 1437, 1843, 2221
SduI	GDGCHC	2 cut(s)	1849, 2424
SexAI	ACCWGGT	1 cut(s)	309
SfaNI	GCATC	8 cut(s)	331, 733, 849, 1162, 1172, 1272, 1606, 2035
SfcI	CTRYAG	2 cut(s)	635, 1505
SinI	GGWCC	1 cut(s)	175
SmiMI	CAYNNNNRTG	3 cut(s)	414, 2015, 2057
SmlI	CTYRAG	2 cut(s)	2499, 2537
SmoI	CTYRAG	2 cut(s)	2499, 2537
SpeI	ACTAGT	1 cut(s)	563
SphI	GCATGC	5 cut(s)	236, 240, 413, 892, 2107
SspMI	CTAG	4 cut(s)	564, 663, 944, 1737
StyD4I	CCNGG	8 cut(s)	309, 360, 648, 1156, 1335, 1435, 1841, 2219
StyI	CCWWGG	5 cut(s)	495, 1067, 1148, 1277, 2363
TaaI	ACNGT	8 cut(s)	305, 856, 1125, 1761, 1943, 2017, 2132, 2165
TaiI	ACGT	4 cut(s)	269, 452, 1624, 2388
TaqI	TCGA	6 cut(s)	72, 277, 706, 844, 1135, 2325
TaqII	GACCGA	2 cut(s)	155, 1017
TatI	WGTACW	2 cut(s)	566, 2165
TauI	GCSGC	4 cut(s)	602, 917, 1591, 2205
Tru1I	TTAA	5 cut(s)	107, 1022, 1205, 1566, 1980
Tru9I	TTAA	5 cut(s)	107, 1022, 1205, 1566, 1980
TscAI	CASTG	7 cut(s)	310, 627, 1128, 1764, 2022, 2214, 2491
TseFI	GTSAC	3 cut(s)	305, 400, 557
Tsp45I	GTSAC	3 cut(s)	305, 400, 557
TspDTI	ATGAA	8 cut(s)	158, 444, 819, 1203, 1265, 1676, 2103, 2508
TspGWI	ACGGA	3 cut(s)	440, 588, 1706
TspRI	CASTG	7 cut(s)	310, 627, 1128, 1764, 2022, 2214, 2491
VneI	GTGCAC	1 cut(s)	2420
VpaK11BI	GGWCC	1 cut(s)	175
VspI	ATTAAT	1 cut(s)	107
XapI	RAATTY	4 cut(s)	217, 507, 828, 1663
XbaI	TCTAGA	1 cut(s)	1736
XceI	RCATGY	7 cut(s)	236, 240, 413, 892, 1397, 2056, 2107
XmiI	GTMKAC	2 cut(s)	1727, 2325
XmnI	GAANNNNTTC	2 cut(s)	21, 486
XspI	CTAG	4 cut(s)	564, 663, 944, 1737
ZraI	GACGTC	1 cut(s)	267
Zsp2I	ATGCAT	3 cut(s)	238, 411, 1176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.