Prupe.3G014900_v2.0.a1
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
1060480 .. 1064656
4177 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G014900.1

Sequence Viewer

Length: 1491 bp
ATGGTGGGTGGATTAATGCTCTCTCCAGATATGGCTGCTGCTCAAGATCAATATGATGGTAGTCGTTCAGAAAGTGTTCTCTCAGCAAACAATGGGTTTTCATTTAGTGCCTCTGGGCTCCAGTTGAAGGATCAATTCTCTAATGGAAATGACTCTGCTCCCAAGGCGAGAAAACCATACACAATCACAAAACAAAGAGAGAGATGGACAGAGGAAGAGCATAAGAAATTCCTTGAAGCTTTAAAGCTGTATGGTCGAGCCTGGCGAAAGATAGAAGAGCATGTTGGCACCAAGACTGCAGTTCAGATTCGAAGTCATGCTCAAAAGTTCTTTTCTAAGGTTGCTCGTGACTCGAATGGCAGCAATGAAATCTCGGAAGAGCCCATTGACATCCCTCCTCCTCGACCAAAACGGAAGCCAATGCGTCCTTATCCCCGAAAACTTGTACACCCTGTTAATAAAGAGACCTTTATTGTAGAGCGGCCAACAAGGTCTGCATCTCCAAATTTATCAGTTTCGGAGCCAGAAAACCAGTCTCCAACATCAGTATTATCAGTGATTGGCTCAGATACACTGGGTTCTGCTGATTCAAATACACCCAGTCGTAGTTTATCACCTGTTTCATCTGCTGCTGATGTCCATGGTGTGGACTTAAATCAGTCTGAACCCCCCAACCCATCACTGGAGGAAAGTGGATCTACATCACCAGCTGTAGCAGAAAATGGTTCACTTCCTAACGTGCAATTATCAATGAAGCTTGAGTTATTTCCCACGGATAATGTTGATGCTAGCGGAGTTTCATCTGAGGAGGTATCCGCACGAAGCCTTAAACTCTTTGGAAGAACTGTATTGGTCACGGATTCCCACAGACCATCTTCTCCAACCTTGGGAACTTCTAAATCACTGCCTTCTGATGTGAAAGAGGAGAAACCTGTGCAGATATCAACACCATGTAACTTTACAGCTACAGAATCTGCATCTGGGAGTGTGGAACATGTTTGGGATAATTTTCCCTATGGAGTACATCCAGGCATGTATTTTATGCAATTTCAGAATCAGAACTCAAATCTGGTAGAACCTGGTTCTGCTTATCCTGTACCATGGTGGACCTTATGTCCAAAATTGCCATTTCCTTTTATTCCATTCCATAAGCCACAAGCAGTAAAAGAACATTTTGATGGTAATCTTGGAGATCCTAAGGAAGTTGAGAAGGAAGGGTCTTGGACTGGTTCAGATGCTGGATCAGTCAACGATGAGGAAAACGGTGACAAATGTCTAGGTATTGAGACTGAGGGTAAAGAACAAGAGCCAAATTCGGTTCTCCAATTTAAGGCAAGTGCAAACTCAGCCTTCTCTGAATTAAGAGCAAGCCCTAGCCCTGGAAAGTGTAGAAAAGGATTTGTACCGTATAAAAGATGTTTGGCTGAGAGAGACACCTCTACAATAGCAAGTGAAGACAGGGATGGGAAAAGAGTCGACCTTTCCTTGTAG

Protein Analysis

497

Amino Acids

54.16

Weight (kDa)

5.72

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 287
AccB7I CCANNNNNTGG 1 cut(s) 646
AccBSI CCGCTC 1 cut(s) 481
AccI GTMKAC 1 cut(s) 1476
AciI CCGC 3 cut(s) 481, 792, 816
AclWI GGATC 4 cut(s) 138, 703, 1187, 1249
AcoI YGGCCR 1 cut(s) 482
AcsI RAATTY 3 cut(s) 227, 505, 1312
AfaI GTAC 4 cut(s) 447, 1023, 1098, 1404
AfiI CCNNNNNNNGG 6 cut(s) 127, 646, 682, 887, 1330, 1379
AflIII ACRYGT 1 cut(s) 994
AgsI TTSAA 3 cut(s) 127, 236, 591
AhdI GACNNNNNGTC 1 cut(s) 1113
AjnI CCWGG 4 cut(s) 260, 1027, 1078, 1378
AjuI GAANNNNNNNTTGG 2 cut(s) 267, 299
AluBI AGCT 5 cut(s) 239, 247, 710, 757, 965
AluI AGCT 5 cut(s) 239, 247, 710, 757, 965
Alw26I GTCTC 4 cut(s) 458, 540, 1280, 1425
AlwI GGATC 4 cut(s) 138, 703, 1187, 1249
AlwNI CAGNNNCTG 2 cut(s) 974, 1238
AoxI GGCC 1 cut(s) 482
ApeKI GCWGC 4 cut(s) 35, 38, 360, 629
ApoI RAATTY 3 cut(s) 227, 505, 1312
AseI ATTAAT 1 cut(s) 14
Asp700I GAANNNNTTC 1 cut(s) 75
AspS9I GGNCC 1 cut(s) 1107
AsuHPI GGTGA 3 cut(s) 606, 696, 1277
AsuII TTCGAA 1 cut(s) 310
AsuNHI GCTAGC 1 cut(s) 788
AvaII GGWCC 1 cut(s) 1107
AxyI CCTNAGG 1 cut(s) 1197
BanI GGYRCC 1 cut(s) 287
BanII GRGCYC 2 cut(s) 120, 384
BauI CACGAG 1 cut(s) 345
BbsI GAAGAC 1 cut(s) 1461
BbvI GCAGC 4 cut(s) 22, 25, 372, 616
BccI CCATC 6 cut(s) 50, 198, 685, 880, 1172, 1457
BciT130I CCWGG 4 cut(s) 262, 1029, 1080, 1380
BciVI GTATCC 1 cut(s) 823
BcoDI GTCTC 4 cut(s) 458, 540, 1280, 1425
BfaI CTAG 3 cut(s) 789, 1277, 1374
BfmI CTRYAG 3 cut(s) 297, 711, 966
BfuI GTATCC 1 cut(s) 823
BisI GCNGC 5 cut(s) 36, 39, 361, 482, 630
BlsI GCNGC 5 cut(s) 37, 40, 362, 483, 631
Bme1390I CCNGG 4 cut(s) 262, 1029, 1080, 1380
Bme18I GGWCC 1 cut(s) 1107
BmeRI GACNNNNNGTC 1 cut(s) 1113
BmgT120I GGNCC 1 cut(s) 1107
BmiI GGNNCC 3 cut(s) 119, 289, 522
BmrFI CCNGG 4 cut(s) 262, 1029, 1080, 1380
BmrI ACTGGG 2 cut(s) 584, 594
BmsI GCATC 4 cut(s) 506, 775, 986, 1225
BmtI GCTAGC 1 cut(s) 792
BmuI ACTGGG 2 cut(s) 584, 594
BoxI GACNNNNGTC 1 cut(s) 1272
BpiI GAAGAC 1 cut(s) 1461
BpmI CTGGAG 3 cut(s) 9, 104, 704
Bpu14I TTCGAA 1 cut(s) 310
BpuEI CTTGAG 2 cut(s) 27, 779
BsaBI GATNNNNATC 2 cut(s) 700, 1182
BsaI GGTCTC 1 cut(s) 458
BsaJI CCNNGG 6 cut(s) 162, 640, 771, 885, 1100, 1378
Bsc4I CCNNNNNNNGG 6 cut(s) 127, 646, 682, 887, 1330, 1379
Bse1I ACTGG 6 cut(s) 121, 532, 579, 600, 687, 1231
Bse21I CCTNAGG 1 cut(s) 1197
Bse3DI GCAATG 1 cut(s) 370
Bse8I GATNNNNATC 2 cut(s) 700, 1182
BseBI CCWGG 4 cut(s) 262, 1029, 1080, 1380
BseDI CCNNGG 6 cut(s) 162, 640, 771, 885, 1100, 1378
BseGI GGATG 3 cut(s) 390, 1024, 1468
BseJI GATNNNNATC 2 cut(s) 700, 1182
BseLI CCNNNNNNNGG 6 cut(s) 127, 646, 682, 887, 1330, 1379
BseMI GCAATG 1 cut(s) 370
BseMII CTCAG 6 cut(s) 96, 579, 795, 1281, 1359, 1416
BseNI ACTGG 6 cut(s) 121, 532, 579, 600, 687, 1231
BseRI GAGGAG 4 cut(s) 387, 390, 821, 938
BseXI GCAGC 4 cut(s) 22, 25, 372, 616
BsgI GTGCAG 1 cut(s) 956
BshFI GGCC 1 cut(s) 484
BshNI GGYRCC 1 cut(s) 287
BslI CCNNNNNNNGG 6 cut(s) 127, 646, 682, 887, 1330, 1379
BsmAI GTCTC 4 cut(s) 458, 540, 1280, 1425
BsnI GGCC 1 cut(s) 484
Bso31I GGTCTC 1 cut(s) 458
Bsp119I TTCGAA 1 cut(s) 310
Bsp1286I GDGCHC 2 cut(s) 120, 384
Bsp1407I TGTACA 1 cut(s) 445
Bsp143I GATC 5 cut(s) 46, 130, 695, 1192, 1241
Bsp19I CCATGG 2 cut(s) 640, 1100
BspACI CCGC 3 cut(s) 481, 792, 816
BspANI GGCC 1 cut(s) 484
BspCNI CTCAG 6 cut(s) 95, 578, 796, 1282, 1358, 1417
BspLI GGNNCC 3 cut(s) 119, 289, 522
BspMAI CTGCAG 1 cut(s) 301
BspOI GCTAGC 1 cut(s) 792
BspPI GGATC 4 cut(s) 138, 703, 1187, 1249
BspQI GCTCTTC 3 cut(s) 210, 270, 372
BspT104I TTCGAA 1 cut(s) 310
BspT107I GGYRCC 1 cut(s) 287
BspTNI GGTCTC 1 cut(s) 458
BsrBI CCGCTC 1 cut(s) 481
BsrDI GCAATG 1 cut(s) 370
BsrGI TGTACA 1 cut(s) 445
BsrI ACTGG 6 cut(s) 121, 532, 579, 600, 687, 1231
BssECI CCNNGG 6 cut(s) 162, 640, 771, 885, 1100, 1378
BssMI GATC 5 cut(s) 46, 130, 695, 1192, 1241
BssSI CACGAG 1 cut(s) 345
BssT1I CCWWGG 4 cut(s) 162, 640, 885, 1100
Bst2BI CACGAG 1 cut(s) 345
Bst2UI CCWGG 4 cut(s) 262, 1029, 1080, 1380
Bst4CI ACNGT 3 cut(s) 847, 1265, 1407
Bst6I CTCTTC 3 cut(s) 210, 270, 372
BstAUI TGTACA 1 cut(s) 445
BstBI TTCGAA 1 cut(s) 310
BstC8I GCNNGC 2 cut(s) 790, 1369
BstDEI CTNAG 8 cut(s) 82, 336, 565, 804, 1197, 1290, 1345, 1425
BstDSI CCRYGG 3 cut(s) 640, 771, 1100
BstF5I GGATG 3 cut(s) 390, 1024, 1468
BstKTI GATC 5 cut(s) 49, 133, 698, 1195, 1244
BstMAI GTCTC 4 cut(s) 458, 540, 1280, 1425
BstMBI GATC 5 cut(s) 46, 130, 695, 1192, 1241
BstMWI GCNNNNNNNGC 2 cut(s) 164, 1346
BstNI CCWGG 4 cut(s) 262, 1029, 1080, 1380
BstNSI RCATGY 3 cut(s) 284, 998, 1036
BstPAI GACNNNNGTC 1 cut(s) 1272
BstSCI CCNGG 4 cut(s) 260, 1027, 1078, 1378
BstSFI CTRYAG 3 cut(s) 297, 711, 966
BstV1I GCAGC 4 cut(s) 22, 25, 372, 616
BstV2I GAAGAC 1 cut(s) 1461
BstX2I RGATCY 2 cut(s) 695, 1192
BstYI RGATCY 2 cut(s) 695, 1192
Bsu36I CCTNAGG 1 cut(s) 1197
BsuI GTATCC 1 cut(s) 823
BsuRI GGCC 1 cut(s) 484
BtgI CCRYGG 3 cut(s) 640, 771, 1100
BtsCI GGATG 3 cut(s) 390, 1024, 1468
BtsI GCAGTG 1 cut(s) 902
BtsIMutI CAGTG 4 cut(s) 561, 572, 680, 902
Cac8I GCNNGC 2 cut(s) 790, 1369
CaiI CAGNNNCTG 2 cut(s) 974, 1238
Cfr13I GGNCC 1 cut(s) 1107
CseI GACGC 1 cut(s) 413
CsiI ACCWGGT 1 cut(s) 1078
Csp6I GTAC 4 cut(s) 446, 1022, 1097, 1403
CviAII CATG 7 cut(s) 281, 317, 641, 951, 995, 1033, 1101
CviQI GTAC 4 cut(s) 446, 1022, 1097, 1403
DdeI CTNAG 8 cut(s) 82, 336, 565, 804, 1197, 1290, 1345, 1425
DpnI GATC 5 cut(s) 48, 132, 697, 1194, 1243
DpnII GATC 5 cut(s) 46, 130, 695, 1192, 1241
DraI TTTAAA 1 cut(s) 243
DriI GACNNNNNGTC 1 cut(s) 1113
EaeI YGGCCR 1 cut(s) 482
Eam1104I CTCTTC 3 cut(s) 210, 270, 372
Eam1105I GACNNNNNGTC 1 cut(s) 1113
EarI CTCTTC 3 cut(s) 210, 270, 372
Eco130I CCWWGG 4 cut(s) 162, 640, 885, 1100
Eco24I GRGCYC 2 cut(s) 120, 384
Eco31I GGTCTC 1 cut(s) 458
Eco32I GATATC 1 cut(s) 942
Eco47I GGWCC 1 cut(s) 1107
Eco81I CCTNAGG 1 cut(s) 1197
EcoRII CCWGG 4 cut(s) 260, 1027, 1078, 1378
EcoRV GATATC 1 cut(s) 942
EcoT14I CCWWGG 4 cut(s) 162, 640, 885, 1100
EcoT38I GRGCYC 2 cut(s) 120, 384
ErhI CCWWGG 4 cut(s) 162, 640, 885, 1100
FaeI CATG 7 cut(s) 284, 320, 644, 954, 998, 1036, 1104
FatI CATG 7 cut(s) 280, 316, 640, 950, 994, 1032, 1100
FblI GTMKAC 1 cut(s) 1476
Fnu4HI GCNGC 5 cut(s) 36, 39, 361, 482, 630
FokI GGATG 3 cut(s) 377, 1011, 1475
FriOI GRGCYC 2 cut(s) 120, 384
Fsp4HI GCNGC 5 cut(s) 36, 39, 361, 482, 630
FspBI CTAG 3 cut(s) 789, 1277, 1374
GluI GCNGC 5 cut(s) 36, 39, 361, 482, 630
GsuI CTGGAG 3 cut(s) 9, 104, 704
HaeIII GGCC 1 cut(s) 484
HgaI GACGC 1 cut(s) 413
Hin1II CATG 7 cut(s) 284, 320, 644, 954, 998, 1036, 1104
HincII GTYRAC 2 cut(s) 1249, 1477
HindII GTYRAC 2 cut(s) 1249, 1477
HindIII AAGCTT 2 cut(s) 237, 755
HinfI GANTC 8 cut(s) 152, 307, 350, 587, 860, 971, 1054, 1473
HphI GGTGA 3 cut(s) 606, 696, 1277
Hpy166II GTNNAC 6 cut(s) 448, 649, 728, 1107, 1249, 1477
Hpy188III TCNNGA 3 cut(s) 26, 44, 347
Hpy8I GTNNAC 6 cut(s) 448, 649, 728, 1107, 1249, 1477
HpyAV CCTTC 5 cut(s) 121, 918, 1204, 1208, 1360
HpyCH4III ACNGT 3 cut(s) 847, 1265, 1407
HpyCH4IV ACGT 1 cut(s) 738
HpyCH4V TGCA 7 cut(s) 299, 497, 742, 937, 977, 1045, 1340
HpyF10VI GCNNNNNNNGC 2 cut(s) 164, 1346
HpyF3I CTNAG 8 cut(s) 82, 336, 565, 804, 1197, 1290, 1345, 1425
HpySE526I ACGT 1 cut(s) 738
Hsp92II CATG 7 cut(s) 284, 320, 644, 954, 998, 1036, 1104
Kzo9I GATC 5 cut(s) 46, 130, 695, 1192, 1241
LguI GCTCTTC 3 cut(s) 210, 270, 372
LmnI GCTCC 3 cut(s) 123, 163, 520
Lsp1109I GCAGC 4 cut(s) 22, 25, 372, 616
LweI GCATC 4 cut(s) 506, 775, 986, 1225
MabI ACCWGGT 1 cut(s) 1078
MaeI CTAG 3 cut(s) 789, 1277, 1374
MaeII ACGT 1 cut(s) 738
MaeIII GTNAC 4 cut(s) 347, 853, 953, 1265
MalI GATC 5 cut(s) 48, 132, 697, 1194, 1243
MbiI CCGCTC 1 cut(s) 481
MboI GATC 5 cut(s) 46, 130, 695, 1192, 1241
MboII GAAGA 6 cut(s) 227, 287, 389, 852, 867, 1466
MflI RGATCY 2 cut(s) 695, 1192
MhlI GDGCHC 2 cut(s) 120, 384
MlyI GAGTC 3 cut(s) 146, 344, 1482
MmeI TCCRAC 2 cut(s) 563, 905
MroXI GAANNNNTTC 1 cut(s) 75
MseI TTAA 7 cut(s) 14, 242, 456, 653, 828, 1329, 1361
MslI CAYNNNNRTG 1 cut(s) 1176
MspA1I CMGCKG 1 cut(s) 710
MspR9I CCNGG 4 cut(s) 262, 1029, 1080, 1380
MvaI CCWGG 4 cut(s) 262, 1029, 1080, 1380
MwoI GCNNNNNNNGC 2 cut(s) 164, 1346
NcoI CCATGG 2 cut(s) 640, 1100
NdeII GATC 5 cut(s) 46, 130, 695, 1192, 1241
NheI GCTAGC 1 cut(s) 788
NlaIII CATG 7 cut(s) 284, 320, 644, 954, 998, 1036, 1104
NlaIV GGNNCC 3 cut(s) 119, 289, 522
NmuCI GTSAC 3 cut(s) 347, 853, 1265
NspI RCATGY 3 cut(s) 284, 998, 1036
NspV TTCGAA 1 cut(s) 310
PciI ACATGT 1 cut(s) 994
PciSI GCTCTTC 3 cut(s) 210, 270, 372
PcsI WCGNNNNNNNCGW 1 cut(s) 262
PdmI GAANNNNTTC 1 cut(s) 75
PfeI GAWTC 5 cut(s) 307, 587, 860, 971, 1054
PflMI CCANNNNNTGG 1 cut(s) 646
PkrI GCNGC 5 cut(s) 37, 40, 362, 483, 631
PleI GAGTC 3 cut(s) 146, 344, 1481
PpsI GAGTC 3 cut(s) 146, 344, 1481
PscI ACATGT 1 cut(s) 994
PshAI GACNNNNGTC 1 cut(s) 1272
PshBI ATTAAT 1 cut(s) 14
Psp6I CCWGG 4 cut(s) 260, 1027, 1078, 1378
PspGI CCWGG 4 cut(s) 260, 1027, 1078, 1378
PspN4I GGNNCC 3 cut(s) 119, 289, 522
PspPI GGNCC 1 cut(s) 1107
PstI CTGCAG 1 cut(s) 301
PstNI CAGNNNCTG 2 cut(s) 974, 1238
PsuI RGATCY 2 cut(s) 695, 1192
PvuII CAGCTG 1 cut(s) 710
RsaI GTAC 4 cut(s) 447, 1023, 1098, 1404
RsaNI GTAC 4 cut(s) 446, 1022, 1097, 1403
RseI CAYNNNNRTG 1 cut(s) 1176
SalI GTCGAC 1 cut(s) 1475
SapI GCTCTTC 3 cut(s) 210, 270, 372
SaqAI TTAA 7 cut(s) 14, 242, 456, 653, 828, 1329, 1361
SatI GCNGC 5 cut(s) 36, 39, 361, 482, 630
Sau3AI GATC 5 cut(s) 46, 130, 695, 1192, 1241
Sau96I GGNCC 1 cut(s) 1107
SchI GAGTC 3 cut(s) 146, 344, 1482
ScrFI CCNGG 4 cut(s) 262, 1029, 1080, 1380
SduI GDGCHC 2 cut(s) 120, 384
SexAI ACCWGGT 1 cut(s) 1078
SfaNI GCATC 4 cut(s) 506, 775, 986, 1225
SfcI CTRYAG 3 cut(s) 297, 711, 966
SfuI TTCGAA 1 cut(s) 310
SinI GGWCC 1 cut(s) 1107
SmiMI CAYNNNNRTG 1 cut(s) 1176
SmlI CTYRAG 2 cut(s) 42, 758
SmoI CTYRAG 2 cut(s) 42, 758
SsiI CCGC 3 cut(s) 481, 792, 816
SspMI CTAG 3 cut(s) 789, 1277, 1374
StyD4I CCNGG 4 cut(s) 260, 1027, 1078, 1378
StyI CCWWGG 4 cut(s) 162, 640, 885, 1100
TaaI ACNGT 3 cut(s) 847, 1265, 1407
TaiI ACGT 1 cut(s) 741
TaqI TCGA 5 cut(s) 256, 310, 353, 403, 1476
TatI WGTACW 2 cut(s) 445, 1021
TauI GCSGC 1 cut(s) 484
TfiI GAWTC 5 cut(s) 307, 587, 860, 971, 1054
Tru1I TTAA 7 cut(s) 14, 242, 456, 653, 828, 1329, 1361
Tru9I TTAA 7 cut(s) 14, 242, 456, 653, 828, 1329, 1361
TscAI CASTG 4 cut(s) 561, 579, 687, 909
TseFI GTSAC 3 cut(s) 347, 853, 1265
TseI GCWGC 4 cut(s) 35, 38, 360, 629
Tsp45I GTSAC 3 cut(s) 347, 853, 1265
TspDTI ATGAA 5 cut(s) 90, 381, 612, 767, 789
TspGWI ACGGA 3 cut(s) 427, 788, 872
TspRI CASTG 4 cut(s) 561, 579, 687, 909
Van91I CCANNNNNTGG 1 cut(s) 646
VpaK11BI GGWCC 1 cut(s) 1107
VspI ATTAAT 1 cut(s) 14
XapI RAATTY 3 cut(s) 227, 505, 1312
XceI RCATGY 3 cut(s) 284, 998, 1036
XcmI CCANNNNNNNNNTGG 1 cut(s) 679
XmiI GTMKAC 1 cut(s) 1476
XmnI GAANNNNTTC 1 cut(s) 75
XspI CTAG 3 cut(s) 789, 1277, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.