Prupe.3G031100_v2.0.a1

Alanine aminotransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
2311742 .. 2317804
6063 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G031100.1

Sequence Viewer

Length: 1635 bp
ATGCGGAAATTCGCAAGCGGCGGACTCAGAAGCCTTCTCATCCATTCTTTTCAGCAAAAGCATATTCTTCGTCCACATCACCCAAGCTCCTCGCTTTCTTCTTCTCTCCCACGTTTCTTGTCTTCCTCTACTCCAGTCCTAGATTTCACTCCTCCTTCTACTTCTTCCATGGCTGACCCCTCTGCTTCCAAGCTCCCTGTCACTCTTCAGAACATAAATCCCAAGATTTTGAAATGTGAATATGCTGTCCGAGGTGAAATTGTCACCCTTGCCCAGAGGTTACAAGAAGAATTACTGGCTAATCCAGGCTCTCATCCCTTTGATGAGATACTTTACTGCAACATTGGAAATCCCCAGTCTCTTGGTCAGCATCCAATAACCTTTTTCCGAGAGGTTCTTGCATTATGTGACCATCCATCCATCTTGGACAAAAGCGAAACACAGGGTCTATTCAGTGCAGATGCAATAGAGCGGGCATGGCAGATTCTAGATCAAATTCCTGGAAGAGCAACTGGTGCATACAGTCATAGTCAGGGTATCAAGGGTTTACGTGATACAATTGCTGCTGGAATTGAAGCTCGTGACGGATATCCTGCTGATCCAAATGATATTTTCTTAACAGATGGTGCAAGCCCTGCGGTCCATATGATGATGCAATTGCTGATAAGCTCAGAACAGGATGGGATTCTTTGTCCCATTCCTCAATACCCCTTGTACTCTGCTTCAATTGCCCTCCACGGTGGTACACTGGTTCCTTACTTCCTTGATGAGGCATCAGGGTGGGGATTGGAAACTTCTGAGTTGAAGAAGCAATTGGAGGACGCAAGGTCCAAGGGTATCAACCCAAGGGCCTTGGTTGTTATAAATCCAGGCAACCCAACAGGGCAGGTGCTTGCTGAGGACAACCAGCGGCAGATTGTGGAATTCTGCAAGCAAGAAGGTCTTGTTTTGCTGGCAGATGAGGTTTATCAAGAAAATGTTTATGTACCTGATAAGGAGTTTCATTCATTCAAGAAGGTATCCCGGTCTATGGGATATGGCGAAAAGGATATTTCTCTGGTATCATTTCAATCAGTATCTAAAGGGTACTACGGGGAGTGTGGAAAAAGAGGTGGTTACATGGAAGTAACTGGTATCAGTCCTGACGTAAGGGAACAAATATACAAAGTGGCGTCTGTGAATCTTTGTTCTAACATCTCTGGTCAAATTCTTGCAAGCCTTGTCATGAGTCCGCCAAAGGTTGGAGATGAATCCTATGAATTGTATTGTGCAGAGAAAGATGGAATCCTGTCATCCCTAGCAAGGCGTGCAAAGACTTTAGAAGATGCGTTGAACAACTTAGAGGGTGTGACATGCAACAGAGCAGAAGGGGCAATGTATCTCTTTCCCCGCATAAACCTGCCTCAAAAGGCAATTAAAGCAGCAGAGGCAGCAAATACAGCTCCAGATGCATTCTACTGTCGCCGCCTTCTCAATGCCACAGGAATCGTGGTTGTTCCTGGTTCTGGTTTTGGGCAGGTTCCTGGCACCTGGCATTTTAGGTGCACAATATTGCCGCAAGAGGATAAAATTCCAGCCATCGTCACCCGTCTGACAGACTTCCACAAGTCATTCATGGACGAGTTTCGAGACTAG

Protein Analysis

545

Amino Acids

59.64

Weight (kDa)

5.78

Isoelectric Point (pI)

45.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 863
AarI CACCTGC 1 cut(s) 877
Acc36I ACCTGC 3 cut(s) 877, 1407, 1507
AccB1I GGYRCC 1 cut(s) 1526
AccB7I CCANNNNNTGG 1 cut(s) 1241
AccBSI CCGCTC 1 cut(s) 472
AclWI GGATC 1 cut(s) 593
AcsI RAATTY 5 cut(s) 8, 495, 923, 1206, 1569
AcuI CTGAAG 1 cut(s) 191
AcyI GRCGYC 1 cut(s) 1172
AfaI GTAC 4 cut(s) 716, 745, 987, 1088
AfiI CCNNNNNNNGG 5 cut(s) 769, 1030, 1241, 1302, 1505
AgsI TTSAA 7 cut(s) 232, 575, 726, 805, 1012, 1070, 1333
AhdI GACNNNNNGTC 1 cut(s) 826
AjnI CCWGG 6 cut(s) 304, 499, 868, 1498, 1522, 1529
AjuI GAANNNNNNNTTGG 2 cut(s) 797, 829
AluBI AGCT 5 cut(s) 87, 193, 578, 669, 1442
AluI AGCT 5 cut(s) 87, 193, 578, 669, 1442
Alw21I GWGCWC 1 cut(s) 1547
Alw26I GTCTC 2 cut(s) 363, 1623
Alw44I GTGCAC 1 cut(s) 1543
AlwI GGATC 1 cut(s) 593
AoxI GGCC 1 cut(s) 849
ApaLI GTGCAC 1 cut(s) 1543
ApeKI GCWGC 3 cut(s) 563, 1421, 1430
ApoI RAATTY 5 cut(s) 8, 495, 923, 1206, 1569
AspS9I GGNCC 3 cut(s) 640, 828, 849
AsuC2I CCSGG 1 cut(s) 1024
AsuHPI GGTGA 4 cut(s) 71, 256, 266, 1576
AvaII GGWCC 2 cut(s) 640, 828
BaeGI GKGCMC 1 cut(s) 1547
BaeI ACNNNNGTAYC 2 cut(s) 735, 768
BanI GGYRCC 1 cut(s) 1526
BauI CACGAG 1 cut(s) 579
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 1547
BbvCI CCTCAGC 1 cut(s) 897
BbvI GCAGC 3 cut(s) 550, 1433, 1442
BccI CCATC 7 cut(s) 420, 424, 428, 617, 674, 1274, 1586
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciT130I CCWGG 6 cut(s) 306, 501, 870, 1500, 1524, 1531
BciVI GTATCC 1 cut(s) 1030
BcnI CCSGG 1 cut(s) 1024
BcoDI GTCTC 2 cut(s) 363, 1623
BfaI CTAG 4 cut(s) 140, 488, 1298, 1633
BfuAI ACCTGC 3 cut(s) 877, 1407, 1507
BfuI GTATCC 1 cut(s) 1030
BisI GCNGC 7 cut(s) 19, 564, 911, 1422, 1431, 1465, 1556
BlsI GCNGC 7 cut(s) 20, 565, 912, 1423, 1432, 1466, 1557
Bme1390I CCNGG 7 cut(s) 306, 501, 870, 1024, 1500, 1524, 1531
Bme18I GGWCC 2 cut(s) 640, 828
BmeRI GACNNNNNGTC 1 cut(s) 826
BmgT120I GGNCC 3 cut(s) 640, 828, 849
BmiI GGNNCC 3 cut(s) 753, 1521, 1528
BmrFI CCNGG 7 cut(s) 306, 501, 870, 1024, 1500, 1524, 1531
BmrI ACTGGG 1 cut(s) 349
BmsI GCATC 6 cut(s) 379, 451, 642, 782, 1315, 1438
BmuI ACTGGG 1 cut(s) 349
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 2 cut(s) 117, 1428
Bpu10I CCTNAGC 1 cut(s) 897
BpuMI CCSGG 1 cut(s) 1024
BsaAI YACGTR 1 cut(s) 551
BsaHI GRCGYC 1 cut(s) 1172
BsaJI CCNNGG 6 cut(s) 168, 250, 736, 831, 845, 852
BsaXI ACNNNNNCTCC 2 cut(s) 71, 101
Bsc4I CCNNNNNNNGG 5 cut(s) 769, 1030, 1241, 1302, 1505
Bse1I ACTGG 6 cut(s) 134, 300, 355, 517, 753, 1135
Bse3DI GCAATG 1 cut(s) 1380
BseBI CCWGG 6 cut(s) 306, 501, 870, 1500, 1524, 1531
BseDI CCNNGG 6 cut(s) 168, 250, 736, 831, 845, 852
BseGI GGATG 7 cut(s) 39, 313, 370, 412, 416, 685, 1292
BseLI CCNNNNNNNGG 5 cut(s) 769, 1030, 1241, 1302, 1505
BseMI GCAATG 1 cut(s) 1380
BseMII CTCAG 4 cut(s) 40, 684, 789, 888
BseNI ACTGG 6 cut(s) 134, 300, 355, 517, 753, 1135
BseRI GAGGAG 2 cut(s) 79, 141
BseSI GKGCMC 1 cut(s) 1547
BseXI GCAGC 3 cut(s) 550, 1433, 1442
BsgI GTGCAG 2 cut(s) 477, 1290
BshFI GGCC 1 cut(s) 851
BshNI GGYRCC 1 cut(s) 1526
BsiHKAI GWGCWC 1 cut(s) 1547
BsiSI CCGG 1 cut(s) 1024
BslFI GGGAC 1 cut(s) 678
BslI CCNNNNNNNGG 5 cut(s) 769, 1030, 1241, 1302, 1505
BsmAI GTCTC 2 cut(s) 363, 1623
BsmFI GGGAC 1 cut(s) 678
BsmI GAATGC 1 cut(s) 1451
BsnI GGCC 1 cut(s) 851
Bsp1286I GDGCHC 1 cut(s) 1547
Bsp143I GATC 2 cut(s) 490, 598
Bsp19I CCATGG 1 cut(s) 168
BspANI GGCC 1 cut(s) 851
BspCNI CTCAG 4 cut(s) 39, 683, 790, 889
BspHI TCATGA 1 cut(s) 1224
BspLI GGNNCC 3 cut(s) 753, 1521, 1528
BspMI ACCTGC 3 cut(s) 877, 1407, 1507
BspPI GGATC 1 cut(s) 593
BspQI GCTCTTC 1 cut(s) 499
BspT107I GGYRCC 1 cut(s) 1526
BsrBI CCGCTC 1 cut(s) 472
BsrDI GCAATG 1 cut(s) 1380
BsrI ACTGG 6 cut(s) 134, 300, 355, 517, 753, 1135
BssECI CCNNGG 6 cut(s) 168, 250, 736, 831, 845, 852
BssMI GATC 2 cut(s) 490, 598
BssNI GRCGYC 1 cut(s) 1172
BssSI CACGAG 1 cut(s) 579
BssT1I CCWWGG 4 cut(s) 168, 831, 845, 852
Bst2BI CACGAG 1 cut(s) 579
Bst2UI CCWGG 6 cut(s) 306, 501, 870, 1500, 1524, 1531
Bst4CI ACNGT 3 cut(s) 524, 740, 1460
Bst6I CTCTTC 2 cut(s) 210, 499
BstACI GRCGYC 1 cut(s) 1172
BstAPI GCANNNNNTGC 3 cut(s) 515, 635, 1307
BstBAI YACGTR 1 cut(s) 551
BstC8I GCNNGC 8 cut(s) 16, 474, 631, 894, 932, 954, 1216, 1308
BstDEI CTNAG 5 cut(s) 26, 670, 798, 897, 1339
BstDSI CCRYGG 2 cut(s) 168, 736
BstENI CCTNNNNNAGG 1 cut(s) 767
BstF5I GGATG 7 cut(s) 39, 313, 370, 412, 416, 685, 1292
BstKTI GATC 2 cut(s) 493, 601
BstMAI GTCTC 2 cut(s) 363, 1623
BstMBI GATC 2 cut(s) 490, 598
BstNI CCWGG 6 cut(s) 306, 501, 870, 1500, 1524, 1531
BstNSI RCATGY 1 cut(s) 1356
BstSCI CCNGG 7 cut(s) 304, 499, 868, 1022, 1498, 1522, 1529
BstSLI GKGCMC 1 cut(s) 1547
BstV1I GCAGC 3 cut(s) 550, 1433, 1442
BstV2I GAAGAC 1 cut(s) 114
BstXI CCANNNNNNTGG 1 cut(s) 362
BsuI GTATCC 1 cut(s) 1030
BsuRI GGCC 1 cut(s) 851
BtgI CCRYGG 2 cut(s) 168, 736
BtsCI GGATG 7 cut(s) 39, 313, 370, 412, 416, 685, 1292
BtsIMutI CAGTG 2 cut(s) 460, 746
BveI ACCTGC 3 cut(s) 877, 1407, 1507
Cac8I GCNNGC 8 cut(s) 16, 474, 631, 894, 932, 954, 1216, 1308
CciI TCATGA 1 cut(s) 1224
Cfr13I GGNCC 3 cut(s) 640, 828, 849
CseI GACGC 2 cut(s) 830, 1161
Csp6I GTAC 4 cut(s) 715, 744, 986, 1087
CspCI CAANNNNNGTGG 2 cut(s) 99, 134
CviAII CATG 6 cut(s) 169, 477, 1120, 1225, 1353, 1615
CviQI GTAC 4 cut(s) 715, 744, 986, 1087
DdeI CTNAG 5 cut(s) 26, 670, 798, 897, 1339
DpnI GATC 2 cut(s) 492, 600
DpnII GATC 2 cut(s) 490, 598
DriI GACNNNNNGTC 1 cut(s) 826
Eam1104I CTCTTC 2 cut(s) 210, 499
Eam1105I GACNNNNNGTC 1 cut(s) 826
EarI CTCTTC 2 cut(s) 210, 499
EciI GGCGGA 2 cut(s) 36, 1221
Eco130I CCWWGG 4 cut(s) 168, 831, 845, 852
Eco32I GATATC 1 cut(s) 590
Eco47I GGWCC 2 cut(s) 640, 828
Eco57I CTGAAG 1 cut(s) 191
EcoNI CCTNNNNNAGG 1 cut(s) 767
EcoO109I RGGNCCY 1 cut(s) 849
EcoRI GAATTC 1 cut(s) 923
EcoRII CCWGG 6 cut(s) 304, 499, 868, 1498, 1522, 1529
EcoRV GATATC 1 cut(s) 590
EcoT14I CCWWGG 4 cut(s) 168, 831, 845, 852
EcoT22I ATGCAT 1 cut(s) 1453
ErhI CCWWGG 4 cut(s) 168, 831, 845, 852
FaeI CATG 6 cut(s) 172, 480, 1123, 1228, 1356, 1618
FalI AAGNNNNNCTT 2 cut(s) 927, 959
FaqI GGGAC 1 cut(s) 678
FatI CATG 6 cut(s) 168, 476, 1119, 1224, 1352, 1614
FauI CCCGC 2 cut(s) 465, 1397
FauNDI CATATG 1 cut(s) 645
Fnu4HI GCNGC 7 cut(s) 19, 564, 911, 1422, 1431, 1465, 1556
FokI GGATG 7 cut(s) 26, 300, 357, 399, 403, 692, 1279
Fsp4HI GCNGC 7 cut(s) 19, 564, 911, 1422, 1431, 1465, 1556
FspBI CTAG 4 cut(s) 140, 488, 1298, 1633
GluI GCNGC 7 cut(s) 19, 564, 911, 1422, 1431, 1465, 1556
GsuI CTGGAG 2 cut(s) 117, 1428
HaeIII GGCC 1 cut(s) 851
HapII CCGG 1 cut(s) 1024
HgaI GACGC 2 cut(s) 830, 1161
Hin1I GRCGYC 1 cut(s) 1172
Hin1II CATG 6 cut(s) 172, 480, 1123, 1228, 1356, 1618
HinfI GANTC 8 cut(s) 24, 484, 685, 1180, 1228, 1250, 1284, 1485
HpaII CCGG 1 cut(s) 1024
HphI GGTGA 4 cut(s) 71, 256, 266, 1576
Hpy166II GTNNAC 4 cut(s) 74, 548, 746, 1545
Hpy188I TCNGA 7 cut(s) 29, 210, 251, 389, 673, 799, 1593
Hpy188III TCNNGA 8 cut(s) 488, 581, 971, 1012, 1142, 1225, 1445, 1628
Hpy8I GTNNAC 4 cut(s) 74, 548, 746, 1545
HpyAV CCTTC 6 cut(s) 44, 165, 932, 1009, 1361, 1478
HpyCH4III ACNGT 3 cut(s) 524, 740, 1460
HpyCH4IV ACGT 3 cut(s) 112, 550, 1146
HpyF3I CTNAG 5 cut(s) 26, 670, 798, 897, 1339
HpySE526I ACGT 3 cut(s) 112, 550, 1146
Hsp92I GRCGYC 1 cut(s) 1172
Hsp92II CATG 6 cut(s) 172, 480, 1123, 1228, 1356, 1618
Kzo9I GATC 2 cut(s) 490, 598
LguI GCTCTTC 1 cut(s) 499
LmnI GCTCC 3 cut(s) 92, 198, 1447
Lsp1109I GCAGC 3 cut(s) 550, 1433, 1442
LweI GCATC 6 cut(s) 379, 451, 642, 782, 1315, 1438
MaeI CTAG 4 cut(s) 140, 488, 1298, 1633
MaeII ACGT 3 cut(s) 112, 550, 1146
MaeIII GTNAC 9 cut(s) 199, 262, 279, 407, 581, 1115, 1126, 1348, 1582
MalI GATC 2 cut(s) 492, 600
MbiI CCGCTC 1 cut(s) 472
MboI GATC 2 cut(s) 490, 598
MfeI CAATTG 4 cut(s) 558, 656, 726, 812
MhlI GDGCHC 1 cut(s) 1547
MlyI GAGTC 2 cut(s) 18, 1237
MmeI TCCRAC 1 cut(s) 1222
Mph1103I ATGCAT 1 cut(s) 1453
MseI TTAA 2 cut(s) 617, 1416
MslI CAYNNNNRTG 1 cut(s) 778
MspA1I CMGCKG 1 cut(s) 910
MspI CCGG 1 cut(s) 1024
MspR9I CCNGG 7 cut(s) 306, 501, 870, 1024, 1500, 1524, 1531
MunI CAATTG 4 cut(s) 558, 656, 726, 812
Mva1269I GAATGC 1 cut(s) 1451
MvaI CCWGG 6 cut(s) 306, 501, 870, 1500, 1524, 1531
NciI CCSGG 1 cut(s) 1024
NcoI CCATGG 1 cut(s) 168
NdeI CATATG 1 cut(s) 645
NdeII GATC 2 cut(s) 490, 598
NlaIII CATG 6 cut(s) 172, 480, 1123, 1228, 1356, 1618
NlaIV GGNNCC 3 cut(s) 753, 1521, 1528
NmuCI GTSAC 6 cut(s) 199, 262, 407, 581, 1348, 1582
NsiI ATGCAT 1 cut(s) 1453
NspI RCATGY 1 cut(s) 1356
PagI TCATGA 1 cut(s) 1224
PaqCI CACCTGC 1 cut(s) 877
PciSI GCTCTTC 1 cut(s) 499
PctI GAATGC 1 cut(s) 1451
PfeI GAWTC 6 cut(s) 484, 685, 1180, 1250, 1284, 1485
PflMI CCANNNNNTGG 1 cut(s) 1241
PfoI TCCNGGA 1 cut(s) 499
PkrI GCNGC 7 cut(s) 20, 565, 912, 1423, 1432, 1466, 1557
PleI GAGTC 2 cut(s) 18, 1236
PpsI GAGTC 2 cut(s) 18, 1236
Ppu21I YACGTR 1 cut(s) 551
PsiI TTATAA 1 cut(s) 863
Psp6I CCWGG 6 cut(s) 304, 499, 868, 1498, 1522, 1529
PspGI CCWGG 6 cut(s) 304, 499, 868, 1498, 1522, 1529
PspN4I GGNNCC 3 cut(s) 753, 1521, 1528
PspPI GGNCC 3 cut(s) 640, 828, 849
RsaI GTAC 4 cut(s) 716, 745, 987, 1088
RsaNI GTAC 4 cut(s) 715, 744, 986, 1087
RseI CAYNNNNRTG 1 cut(s) 778
SapI GCTCTTC 1 cut(s) 499
SaqAI TTAA 2 cut(s) 617, 1416
SatI GCNGC 7 cut(s) 19, 564, 911, 1422, 1431, 1465, 1556
Sau3AI GATC 2 cut(s) 490, 598
Sau96I GGNCC 3 cut(s) 640, 828, 849
SchI GAGTC 2 cut(s) 18, 1237
ScrFI CCNGG 7 cut(s) 306, 501, 870, 1024, 1500, 1524, 1531
SduI GDGCHC 1 cut(s) 1547
SfaNI GCATC 6 cut(s) 379, 451, 642, 782, 1315, 1438
SinI GGWCC 2 cut(s) 640, 828
SmiMI CAYNNNNRTG 1 cut(s) 778
SspI AATATT 1 cut(s) 1551
SspMI CTAG 4 cut(s) 140, 488, 1298, 1633
StyD4I CCNGG 7 cut(s) 304, 499, 868, 1022, 1498, 1522, 1529
StyI CCWWGG 4 cut(s) 168, 831, 845, 852
TaaI ACNGT 3 cut(s) 524, 740, 1460
TaiI ACGT 3 cut(s) 115, 553, 1149
TaqI TCGA 1 cut(s) 1627
TatI WGTACW 1 cut(s) 714
TauI GCSGC 4 cut(s) 21, 913, 1467, 1558
TfiI GAWTC 6 cut(s) 484, 685, 1180, 1250, 1284, 1485
Tru1I TTAA 2 cut(s) 617, 1416
Tru9I TTAA 2 cut(s) 617, 1416
TscAI CASTG 2 cut(s) 460, 753
TseFI GTSAC 6 cut(s) 199, 262, 407, 581, 1348, 1582
TseI GCWGC 3 cut(s) 563, 1421, 1430
Tsp45I GTSAC 6 cut(s) 199, 262, 407, 581, 1348, 1582
TspDTI ATGAA 5 cut(s) 992, 996, 1263, 1272, 1603
TspGWI ACGGA 1 cut(s) 600
TspRI CASTG 2 cut(s) 460, 753
Van91I CCANNNNNTGG 1 cut(s) 1241
VneI GTGCAC 1 cut(s) 1543
VpaK11BI GGWCC 2 cut(s) 640, 828
XagI CCTNNNNNAGG 1 cut(s) 767
XapI RAATTY 5 cut(s) 8, 495, 923, 1206, 1569
XbaI TCTAGA 1 cut(s) 487
XceI RCATGY 1 cut(s) 1356
XcmI CCANNNNNNNNNTGG 1 cut(s) 1486
XspI CTAG 4 cut(s) 140, 488, 1298, 1633
Zsp2I ATGCAT 1 cut(s) 1453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.