Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0006553

Physical Location & Seq

Genomic Coordinates Reverse (-)

60500549 .. 60505702

Gene Structure 5154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG446700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGCGGAGATTCGTAAGCGGCAGACTCAGAAGCCTCGTCGTCCATTCTTTACAGACCAAACAGCAGATTCGCCCCCAGCAGCAGACACCTCTATTTCTCAGTCGTTTCTTGTCCGCTGCTCCAGCTCTCGACTTCCCATCTTCCATGGCTGACAAATCTCCTTCTCCTCTCACTGTCACTGTTGGGAATATCAATCCCAAGGTTGTGAAGTGTGAATATGCTGTCCGAGGTGAAATTGTCATTCTTGCTGGGAAAATTCAAGAAGAGTTGAAGGCTAATCCAGACTCTCATCCTTTTGATGAGATACTTTACTGCAATATCGGAAATCCTCAGTCTCTTGGCCAGCAACCAATCACTTATTTCCGAGAGGTTCTTGCGTTGTGTGACCATCCATCCATCTTGGACAAGAGTGAAACACAAGGCTTGTTCAGCGCCGATTCAATTGAGCGGGCATGGGAGGTTCTAGATCAAATTCCTGGAAGAGCAACTGGTGCTTACAGTCACAGTCAGGGTATCAAGGGGTTACGTGACACAATTGCTGCTGGAATTGAAGCTCGTGATGGATATCCTGCTGATCCAAATGATCTTTTCTTAACAGATGGTGCAAGCCCTGCGGTATCTCCTGACTACCATTCTATATTGCAGTCACATTCCTACAGTGCTGTACAATTTGGCTCTCGTGATATATTGCCACACTGCAGCATCCATGACAAATCATTTTCATTTTTCTCTTATCAGGTCCATATGATGTTGACATTGCTGTTAAGATCAGAAAAGGATGGGATTCTTTGTCCTATTCCTCAATACCCTTTGTATTCCGCTTCAATTGCCCTCCATGGTGGCACACTGGTTCCTTACTATCTTGATGAGGCATCAGGGTGGGGATTGGAAATTTCTGACTTGAAGAAGCAACTAGAGGATGCAAAGTCTAAAGGTGTCAATATAAGAGCCTTGGTTGTTATTAATCCAGGCAACCCAACCGGGCAGGTTCTTGCTGAGGACAACCAACGGCAGATTGTGGAGTTCTGCAAGCAAGAAGGTCTTGTTTTACTGGCAGATGAGGTATATCAAGAGAACATATATGTTCCTGATAAGGAGTTTCATTCATTCAAGAAGGTAGCAAGGTCTATGGGATACGGTGAGACGGATATTCCACTGGTATCTTTTCAATCAGTCTCTAAAGGGTACTACGGGGAGTGTGGAAAAAGAGGTGGATACATGGAAGTCACTGGATTTAGTCCTGAAGTGAGGGAACAAATATACAAAATGGCATCGGTCAATCTTTGTTCTAATATCAGTGGTCAAATTCTTGCAAGCCTAGTCATGAGTCCACCAAAGGTTGGAGATGAATCCTATGAATTGTATCTTTCAGAGAAAGATGGAATTCTGTCATCCCTAAAAAGGCGTGCAAAGACACTAGAGAATGCGTTGAACAGCCTGGAGGGTGTGACATGCAACAGAGCCGAGGGGGCAATGTATCTGTTTCCTCGCATAGACCTGCCTCAAAAGGCAATCAAAGCAGCAGAGGCTGAAAAGACAGCTCCAGATGCATTCTATTGCAAACGTCTTCTGAATGCCACTGGAATTGTTGTTGTTCCTGGTTCTGGTTTCGGGCAGGTTCCTGGCACCTGGCATTTTAGATGCACAATCTTGCCTCAAGAGGATAAAATTCCAGCTATCGTCAACCGTCTAACAGAGTTCCACAAAAAGTTCATGGACGAGTTTCGCGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001666 GO:0003674 GO:0003824 GO:0004021 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006522 GO:0006524 GO:0006807 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008483 GO:0009056 GO:0009063 GO:0009078 GO:0009080 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0016054 GO:0016740 GO:0016769 GO:0017076 GO:0019481 GO:0019752 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0036293 GO:0042221 GO:0042851 GO:0042853 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046686 GO:0047635 GO:0050896 GO:0070482 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko00710 ko01100 ko01120 ko01200 ko01210 ko01230 map00220 map00250 map00710 map01100 map01120 map01200 map01210 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

577

Amino Acids

63.84

Weight (kDa)

5.96

Isoelectric Point (pI)

49.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_1_2	PF00155	249 - 557	3.2e-36	Aminotransferase class I and II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006553)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17290 AT1G72330 AT1G72330 AT1G72330
fragaria_vesca	FvH4_6g35810 FvH4_6g35810
malus_domestica	MD09G1173000.v1.1 MD17G1154300.v1.1
prunus_persica	Prupe.3G031100_v2.0.a1 Prupe.3G031100_v2.0.a1
pyrus_communis	pycom09g09040 pycom17g14700
rosa_chinensis	RchiOBHm_Chr2g0147841
rosa_laevigata	RLG00000020283
rosa_multiflora	Rmu_co8135398.1_g000001 Rmu_co8265871.1_g000001 Rmu_co8360303.1_g000001 Rmu_sc0000308.1_g000051 Rmu_sc0042380.1_g000001
rosa_roxburghii	Rroxscaffold_2G00099280
rosa_rugosa	Rorug02G0402300
rosa_samantha	Rh2AG459300 Rh2BG472600 Rh2CG446700 Rh2DG481600
rosa_wichuraiana	Rw2G037570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	976, 1506, 1606
AccB1I	GGYRCC	1 cut(s)	1625
AccB7I	CCANNNNNTGG	1 cut(s)	1340
AccBSI	CCGCTC	1 cut(s)	448
AccII	CGCG	1 cut(s)	1728
AciI	CCGC	6 cut(s)	4, 18, 114, 448, 614, 819
AclWI	GGATC	1 cut(s)	569
AcoI	YGGCCR	1 cut(s)	340
AcsI	RAATTY	6 cut(s)	255, 471, 891, 1305, 1383, 1668
AcuI	CTGAAG	1 cut(s)	1263
AfaI	GTAC	2 cut(s)	666, 1187
AfiI	CCNNNNNNNGG	3 cut(s)	1340, 1401, 1604
AgsI	TTSAA	9 cut(s)	260, 271, 441, 551, 825, 904, 1111, 1169, 1432
AjnI	CCWGG	6 cut(s)	475, 967, 1437, 1597, 1621, 1628
AluBI	AGCT	4 cut(s)	125, 554, 1541, 1676
AluI	AGCT	4 cut(s)	125, 554, 1541, 1676
Alw26I	GTCTC	3 cut(s)	339, 1136, 1180
AlwI	GGATC	1 cut(s)	569
AlwNI	CAGNNNCTG	1 cut(s)	1529
AoxI	GGCC	1 cut(s)	340
ApeKI	GCWGC	5 cut(s)	79, 116, 539, 699, 1520
ApoI	RAATTY	6 cut(s)	255, 471, 891, 1305, 1383, 1668
AseI	ATTAAT	1 cut(s)	963
AspLEI	GCGC	1 cut(s)	434
AspS9I	GGNCC	1 cut(s)	739
AsuC2I	CCSGG	1 cut(s)	982
AsuHPI	GGTGA	2 cut(s)	242, 1151
AvaII	GGWCC	1 cut(s)	739
BalI	TGGCCA	1 cut(s)	342
BanI	GGYRCC	1 cut(s)	1625
BauI	CACGAG	2 cut(s)	555, 678
BbsI	GAAGAC	1 cut(s)	1559
BbvCI	CCTCAGC	1 cut(s)	996
BbvI	GCAGC	5 cut(s)	91, 103, 526, 711, 1532
BccI	CCATC	8 cut(s)	145, 396, 400, 404, 554, 593, 773, 1373
BceAI	ACGGC	1 cut(s)	1025
BciT130I	CCWGG	6 cut(s)	477, 969, 1439, 1599, 1623, 1630
BciVI	GTATCC	2 cut(s)	1127, 1208
BcnI	CCSGG	1 cut(s)	982
BcoDI	GTCTC	3 cut(s)	339, 1136, 1180
BfaI	CTAG	5 cut(s)	464, 914, 1319, 1418, 1732
BfmI	CTRYAG	2 cut(s)	655, 697
BfoI	RGCGCY	1 cut(s)	435
BfuAI	ACCTGC	3 cut(s)	976, 1506, 1606
BfuI	GTATCC	2 cut(s)	1127, 1208
BglI	GCCNNNNNGGC	1 cut(s)	1469
BisI	GCNGC	6 cut(s)	19, 80, 117, 540, 700, 1521
BlsI	GCNGC	6 cut(s)	20, 81, 118, 541, 701, 1522
Bme1390I	CCNGG	7 cut(s)	477, 969, 982, 1439, 1599, 1623, 1630
Bme18I	GGWCC	1 cut(s)	739
BmgT120I	GGNCC	1 cut(s)	739
BmiI	GGNNCC	3 cut(s)	852, 1620, 1627
BmrFI	CCNGG	7 cut(s)	477, 969, 982, 1439, 1599, 1623, 1630
BmsI	GCATC	6 cut(s)	711, 881, 910, 1280, 1537, 1631
BpiI	GAAGAC	1 cut(s)	1559
BpmI	CTGGAG	3 cut(s)	105, 1460, 1527
Bpu10I	CCTNAGC	1 cut(s)	996
BpuEI	CTTGAG	1 cut(s)	1641
BpuMI	CCSGG	1 cut(s)	982
BsaAI	YACGTR	1 cut(s)	527
BsaBI	GATNNNNATC	1 cut(s)	564
BsaJI	CCNNGG	6 cut(s)	144, 198, 226, 835, 951, 1464
Bsc4I	CCNNNNNNNGG	3 cut(s)	1340, 1401, 1604
Bse1I	ACTGG	6 cut(s)	493, 852, 1056, 1161, 1234, 1585
Bse3DI	GCAATG	2 cut(s)	755, 1479
Bse8I	GATNNNNATC	1 cut(s)	564
BseBI	CCWGG	6 cut(s)	477, 969, 1439, 1599, 1623, 1630
BseDI	CCNNGG	6 cut(s)	144, 198, 226, 835, 951, 1464
BseGI	GGATG	7 cut(s)	289, 388, 392, 702, 784, 925, 1391
BseJI	GATNNNNATC	1 cut(s)	564
BseLI	CCNNNNNNNGG	3 cut(s)	1340, 1401, 1604
BseMI	GCAATG	2 cut(s)	755, 1479
BseMII	CTCAG	4 cut(s)	40, 112, 344, 987
BseNI	ACTGG	6 cut(s)	493, 852, 1056, 1161, 1234, 1585
BseRI	GAGGAG	1 cut(s)	156
BseXI	GCAGC	5 cut(s)	91, 103, 526, 711, 1532
BseYI	CCCAGC	2 cut(s)	75, 248
Bsh1236I	CGCG	1 cut(s)	1728
BshFI	GGCC	1 cut(s)	342
BshNI	GGYRCC	1 cut(s)	1625
BsiSI	CCGG	1 cut(s)	981
BslI	CCNNNNNNNGG	3 cut(s)	1340, 1401, 1604
BsmAI	GTCTC	3 cut(s)	339, 1136, 1180
BsmBI	CGTCTC	1 cut(s)	1136
BsmI	GAATGC	3 cut(s)	1429, 1550, 1579
BsnI	GGCC	1 cut(s)	342
Bsp1407I	TGTACA	1 cut(s)	664
Bsp143I	GATC	4 cut(s)	466, 574, 583, 767
Bsp19I	CCATGG	2 cut(s)	144, 835
Bsp68I	TCGCGA	1 cut(s)	1728
BspACI	CCGC	6 cut(s)	4, 18, 114, 448, 614, 819
BspANI	GGCC	1 cut(s)	342
BspCNI	CTCAG	4 cut(s)	39, 111, 343, 988
BspFNI	CGCG	1 cut(s)	1728
BspHI	TCATGA	1 cut(s)	1323
BspLI	GGNNCC	3 cut(s)	852, 1620, 1627
BspMAI	CTGCAG	1 cut(s)	701
BspMI	ACCTGC	3 cut(s)	976, 1506, 1606
BspPI	GGATC	1 cut(s)	569
BspQI	GCTCTTC	1 cut(s)	475
BspT107I	GGYRCC	1 cut(s)	1625
BsrBI	CCGCTC	1 cut(s)	448
BsrDI	GCAATG	2 cut(s)	755, 1479
BsrGI	TGTACA	1 cut(s)	664
BsrI	ACTGG	6 cut(s)	493, 852, 1056, 1161, 1234, 1585
BssECI	CCNNGG	6 cut(s)	144, 198, 226, 835, 951, 1464
BssMI	GATC	4 cut(s)	466, 574, 583, 767
BssSI	CACGAG	2 cut(s)	555, 678
BssT1I	CCWWGG	4 cut(s)	144, 198, 835, 951
Bst2BI	CACGAG	2 cut(s)	555, 678
Bst2UI	CCWGG	6 cut(s)	477, 969, 1439, 1599, 1623, 1630
Bst4CI	ACNGT	7 cut(s)	175, 181, 500, 506, 659, 1139, 1688
Bst6I	CTCTTC	2 cut(s)	258, 475
BstAPI	GCANNNNNTGC	2 cut(s)	491, 611
BstAUI	TGTACA	1 cut(s)	664
BstBAI	YACGTR	1 cut(s)	527
BstC8I	GCNNGC	6 cut(s)	344, 450, 607, 1031, 1315, 1407
BstDEI	CTNAG	4 cut(s)	26, 98, 330, 996
BstDSI	CCRYGG	2 cut(s)	144, 835
BstF5I	GGATG	7 cut(s)	289, 388, 392, 702, 784, 925, 1391
BstFNI	CGCG	1 cut(s)	1728
BstH2I	RGCGCY	1 cut(s)	435
BstHHI	GCGC	1 cut(s)	434
BstKTI	GATC	4 cut(s)	469, 577, 586, 770
BstMAI	GTCTC	3 cut(s)	339, 1136, 1180
BstMBI	GATC	4 cut(s)	466, 574, 583, 767
BstMWI	GCNNNNNNNGC	9 cut(s)	122, 429, 491, 611, 827, 1469, 1517, 1526, 1547
BstNI	CCWGG	6 cut(s)	477, 969, 1439, 1599, 1623, 1630
BstNSI	RCATGY	1 cut(s)	1455
BstSCI	CCNGG	7 cut(s)	475, 967, 980, 1437, 1597, 1621, 1628
BstSFI	CTRYAG	2 cut(s)	655, 697
BstUI	CGCG	1 cut(s)	1728
BstV1I	GCAGC	5 cut(s)	91, 103, 526, 711, 1532
BstV2I	GAAGAC	1 cut(s)	1559
BsuI	GTATCC	2 cut(s)	1127, 1208
BsuRI	GGCC	1 cut(s)	342
BtgI	CCRYGG	2 cut(s)	144, 835
BtsCI	GGATG	7 cut(s)	289, 388, 392, 702, 784, 925, 1391
BtsI	GCAGTG	1 cut(s)	694
BtsIMutI	CAGTG	9 cut(s)	171, 177, 664, 694, 845, 1154, 1227, 1303, 1578
BtuMI	TCGCGA	1 cut(s)	1728
BveI	ACCTGC	3 cut(s)	976, 1506, 1606
Cac8I	GCNNGC	6 cut(s)	344, 450, 607, 1031, 1315, 1407
CaiI	CAGNNNCTG	1 cut(s)	1529
CciI	TCATGA	1 cut(s)	1323
CfoI	GCGC	1 cut(s)	434
Cfr13I	GGNCC	1 cut(s)	739
Csp6I	GTAC	2 cut(s)	665, 1186
CspCI	CAANNNNNGTGG	2 cut(s)	1567, 1602
CviAII	CATG	8 cut(s)	145, 453, 707, 836, 1219, 1324, 1452, 1714
CviQI	GTAC	2 cut(s)	665, 1186
DdeI	CTNAG	4 cut(s)	26, 98, 330, 996
DpnI	GATC	4 cut(s)	468, 576, 585, 769
DpnII	GATC	4 cut(s)	466, 574, 583, 767
EaeI	YGGCCR	1 cut(s)	340
Eam1104I	CTCTTC	2 cut(s)	258, 475
EarI	CTCTTC	2 cut(s)	258, 475
Eco130I	CCWWGG	4 cut(s)	144, 198, 835, 951
Eco32I	GATATC	1 cut(s)	566
Eco47I	GGWCC	1 cut(s)	739
Eco57I	CTGAAG	1 cut(s)	1263
EcoRI	GAATTC	1 cut(s)	1383
EcoRII	CCWGG	6 cut(s)	475, 967, 1437, 1597, 1621, 1628
EcoRV	GATATC	1 cut(s)	566
EcoT14I	CCWWGG	4 cut(s)	144, 198, 835, 951
EcoT22I	ATGCAT	1 cut(s)	1552
ErhI	CCWWGG	4 cut(s)	144, 198, 835, 951
Esp3I	CGTCTC	1 cut(s)	1136
FaeI	CATG	8 cut(s)	148, 456, 710, 839, 1222, 1327, 1455, 1717
FalI	AAGNNNNNCTT	2 cut(s)	1026, 1058
FatI	CATG	8 cut(s)	144, 452, 706, 835, 1218, 1323, 1451, 1713
FauI	CCCGC	1 cut(s)	441
FauNDI	CATATG	1 cut(s)	744
Fnu4HI	GCNGC	6 cut(s)	19, 80, 117, 540, 700, 1521
FokI	GGATG	7 cut(s)	276, 375, 379, 689, 791, 932, 1378
Fsp4HI	GCNGC	6 cut(s)	19, 80, 117, 540, 700, 1521
FspBI	CTAG	5 cut(s)	464, 914, 1319, 1418, 1732
GlaI	GCGC	1 cut(s)	433
GluI	GCNGC	6 cut(s)	19, 80, 117, 540, 700, 1521
GsaI	CCCAGC	2 cut(s)	79, 252
GsuI	CTGGAG	3 cut(s)	105, 1460, 1527
HaeII	RGCGCY	1 cut(s)	435
HaeIII	GGCC	1 cut(s)	342
HapII	CCGG	1 cut(s)	981
HhaI	GCGC	1 cut(s)	434
Hin1II	CATG	8 cut(s)	148, 456, 710, 839, 1222, 1327, 1455, 1717
Hin6I	GCGC	1 cut(s)	432
HinP1I	GCGC	1 cut(s)	432
HincII	GTYRAC	2 cut(s)	753, 1684
HindII	GTYRAC	2 cut(s)	753, 1684
HinfI	GANTC	8 cut(s)	9, 24, 67, 284, 437, 784, 1327, 1349
HpaII	CCGG	1 cut(s)	981
HphI	GGTGA	2 cut(s)	242, 1151
Hpy166II	GTNNAC	3 cut(s)	753, 1331, 1684
Hpy188I	TCNGA	8 cut(s)	29, 227, 323, 365, 772, 898, 1372, 1572
Hpy8I	GTNNAC	3 cut(s)	753, 1331, 1684
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	4 cut(s)	171, 265, 1031, 1108
HpyCH4III	ACNGT	7 cut(s)	175, 181, 500, 506, 659, 1139, 1688
HpyCH4IV	ACGT	2 cut(s)	526, 1564
HpyF10VI	GCNNNNNNNGC	9 cut(s)	122, 429, 491, 611, 827, 1469, 1517, 1526, 1547
HpyF3I	CTNAG	4 cut(s)	26, 98, 330, 996
HpySE526I	ACGT	2 cut(s)	526, 1564
Hsp92II	CATG	8 cut(s)	148, 456, 710, 839, 1222, 1327, 1455, 1717
HspAI	GCGC	1 cut(s)	432
Kzo9I	GATC	4 cut(s)	466, 574, 583, 767
LguI	GCTCTTC	1 cut(s)	475
LmnI	GCTCC	2 cut(s)	124, 1546
Lsp1109I	GCAGC	5 cut(s)	91, 103, 526, 711, 1532
LweI	GCATC	6 cut(s)	711, 881, 910, 1280, 1537, 1631
MaeI	CTAG	5 cut(s)	464, 914, 1319, 1418, 1732
MaeII	ACGT	2 cut(s)	526, 1564
MaeIII	GTNAC	8 cut(s)	175, 383, 500, 522, 527, 645, 1225, 1447
MalI	GATC	4 cut(s)	468, 576, 585, 769
MbiI	CCGCTC	1 cut(s)	448
MboI	GATC	4 cut(s)	466, 574, 583, 767
MboII	GAAGA	5 cut(s)	132, 275, 492, 916, 1559
MfeI	CAATTG	3 cut(s)	441, 534, 825
MlsI	TGGCCA	1 cut(s)	342
MluNI	TGGCCA	1 cut(s)	342
MlyI	GAGTC	3 cut(s)	18, 278, 1336
MmeI	TCCRAC	1 cut(s)	1321
Mox20I	TGGCCA	1 cut(s)	342
Mph1103I	ATGCAT	1 cut(s)	1552
MscI	TGGCCA	1 cut(s)	342
MseI	TTAA	3 cut(s)	593, 764, 963
MslI	CAYNNNNRTG	1 cut(s)	877
Msp20I	TGGCCA	1 cut(s)	342
MspA1I	CMGCKG	1 cut(s)	116
MspI	CCGG	1 cut(s)	981
MspR9I	CCNGG	7 cut(s)	477, 969, 982, 1439, 1599, 1623, 1630
MunI	CAATTG	3 cut(s)	441, 534, 825
Mva1269I	GAATGC	3 cut(s)	1429, 1550, 1579
MvaI	CCWGG	6 cut(s)	477, 969, 1439, 1599, 1623, 1630
MvnI	CGCG	1 cut(s)	1728
MwoI	GCNNNNNNNGC	9 cut(s)	122, 429, 491, 611, 827, 1469, 1517, 1526, 1547
NciI	CCSGG	1 cut(s)	982
NcoI	CCATGG	2 cut(s)	144, 835
NdeI	CATATG	1 cut(s)	744
NdeII	GATC	4 cut(s)	466, 574, 583, 767
NlaIII	CATG	8 cut(s)	148, 456, 710, 839, 1222, 1327, 1455, 1717
NlaIV	GGNNCC	3 cut(s)	852, 1620, 1627
NmeAIII	GCCGAG	1 cut(s)	1489
NmuCI	GTSAC	7 cut(s)	175, 383, 500, 527, 645, 1225, 1447
NruI	TCGCGA	1 cut(s)	1728
NsiI	ATGCAT	1 cut(s)	1552
NspI	RCATGY	1 cut(s)	1455
PagI	TCATGA	1 cut(s)	1323
PciSI	GCTCTTC	1 cut(s)	475
PcsI	WCGNNNNNNNCGW	1 cut(s)	1725
PctI	GAATGC	3 cut(s)	1429, 1550, 1579
PfeI	GAWTC	5 cut(s)	9, 67, 437, 784, 1349
PflMI	CCANNNNNTGG	1 cut(s)	1340
PfoI	TCCNGGA	1 cut(s)	475
PkrI	GCNGC	6 cut(s)	20, 81, 118, 541, 701, 1522
PleI	GAGTC	3 cut(s)	18, 278, 1335
PpsI	GAGTC	3 cut(s)	18, 278, 1335
Ppu21I	YACGTR	1 cut(s)	527
PshBI	ATTAAT	1 cut(s)	963
Psp6I	CCWGG	6 cut(s)	475, 967, 1437, 1597, 1621, 1628
PspFI	CCCAGC	2 cut(s)	75, 248
PspGI	CCWGG	6 cut(s)	475, 967, 1437, 1597, 1621, 1628
PspN4I	GGNNCC	3 cut(s)	852, 1620, 1627
PspPI	GGNCC	1 cut(s)	739
PstI	CTGCAG	1 cut(s)	701
PstNI	CAGNNNCTG	1 cut(s)	1529
RruI	TCGCGA	1 cut(s)	1728
RsaI	GTAC	2 cut(s)	666, 1187
RsaNI	GTAC	2 cut(s)	665, 1186
RseI	CAYNNNNRTG	1 cut(s)	877
SapI	GCTCTTC	1 cut(s)	475
SaqAI	TTAA	3 cut(s)	593, 764, 963
SatI	GCNGC	6 cut(s)	19, 80, 117, 540, 700, 1521
Sau3AI	GATC	4 cut(s)	466, 574, 583, 767
Sau96I	GGNCC	1 cut(s)	739
SchI	GAGTC	3 cut(s)	18, 278, 1336
ScrFI	CCNGG	7 cut(s)	477, 969, 982, 1439, 1599, 1623, 1630
SfaNI	GCATC	6 cut(s)	711, 881, 910, 1280, 1537, 1631
SfcI	CTRYAG	2 cut(s)	655, 697
SinI	GGWCC	1 cut(s)	739
SmiMI	CAYNNNNRTG	1 cut(s)	877
SmlI	CTYRAG	1 cut(s)	1656
SmoI	CTYRAG	1 cut(s)	1656
SsiI	CCGC	6 cut(s)	4, 18, 114, 448, 614, 819
SspMI	CTAG	5 cut(s)	464, 914, 1319, 1418, 1732
StyD4I	CCNGG	7 cut(s)	475, 967, 980, 1437, 1597, 1621, 1628
StyI	CCWWGG	4 cut(s)	144, 198, 835, 951
TaaI	ACNGT	7 cut(s)	175, 181, 500, 506, 659, 1139, 1688
TaiI	ACGT	2 cut(s)	529, 1567
TaqI	TCGA	1 cut(s)	129
TaqII	GACCGA	1 cut(s)	1264
TatI	WGTACW	1 cut(s)	664
TauI	GCSGC	1 cut(s)	21
TfiI	GAWTC	5 cut(s)	9, 67, 437, 784, 1349
Tru1I	TTAA	3 cut(s)	593, 764, 963
Tru9I	TTAA	3 cut(s)	593, 764, 963
TscAI	CASTG	9 cut(s)	178, 184, 664, 701, 852, 1161, 1234, 1303, 1585
TseFI	GTSAC	7 cut(s)	175, 383, 500, 527, 645, 1225, 1447
TseI	GCWGC	5 cut(s)	79, 116, 539, 699, 1520
Tsp45I	GTSAC	7 cut(s)	175, 383, 500, 527, 645, 1225, 1447
TspDTI	ATGAA	6 cut(s)	711, 1091, 1095, 1362, 1371, 1702
TspGWI	ACGGA	1 cut(s)	1160
TspRI	CASTG	9 cut(s)	178, 184, 664, 701, 852, 1161, 1234, 1303, 1585
Van91I	CCANNNNNTGG	1 cut(s)	1340
VpaK11BI	GGWCC	1 cut(s)	739
VspI	ATTAAT	1 cut(s)	963
XapI	RAATTY	6 cut(s)	255, 471, 891, 1305, 1383, 1668
XbaI	TCTAGA	1 cut(s)	463
XceI	RCATGY	1 cut(s)	1455
XspI	CTAG	5 cut(s)	464, 914, 1319, 1418, 1732
Zsp2I	ATGCAT	1 cut(s)	1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.