pycom17g14700

Alanine aminotransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
12371273 .. 12376267
4995 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g14700.11

Sequence Viewer

Length: 1605 bp
ATGCGGAAATTCGCAAGCGGCAGAGTAAGAAACATTCTCATCCGTTCCATTCAGCAACAGCAGATTCGTCCAACAAGCTCCTCTTCCTCTGTGTTCTCTTCTTCTCGGTCACGCTTCCTGTCTTCCTTCGCCGCTCCAGCTGTAGATTTCCCTCCTTCTCTTCCTCCCATGGCTCTTCAGAACATCAATCCCAAGGTTTTGAAATGTGAATATGCTGTCCGAGGTGAAATGGTCACCCTTGCCCAGAGGTTACAAGAAGAATTAAAGGCGAATCCCGGCTCTCATCCCTTTGATGAGATTCTTTACTGCAATATCGGAAATCCTCAGTCTCTTGGTCAGCAACCGATAACATTTTTCCGAGAGGTTCTTGCATTATGTGACCATCCAGCCATCTTGGACAAAAGCGAAACACAGGGTTTGTTCAGTGCCGATGCAATAGAGCGGGCATGGCAGATTCTGGATCAAATTCCTGGAAGAGCAACTGGTGCTTATAGTCACAGTCAGGGTATCAAGGGTTTACGTGATACAATTGCTGCTGGAATTGAAGCTCGTGATGGATATCCTGCTCATCCGAATGATATTTTCTTAACCGATGGTGCAAGCCCTGCGATCCATATGATGATGCAATTGCTGATAAGTTCAGAGAAGGATGGGATTCTTTGTCCCATTCCTCAATACCCTTTGTACTCTGCTTCAATTGCCCTCCACGGTGGCACACTGGTTCCCTACTTTCTTGATGAGGCATCGGGGTGGGGATTGGAAACTTCTGAGTTGAAGAAGCAATTGGAGGATGCGAAGTCCAAGGGTATCAATGTAAGGGCCTTGGTTGTGATAAATCCAGGCAACCCAACAGGACAGGTTCTTGCCGAGGACAACCAGCGGCAGATTGTGGACTTCTGCAAGCAAGAAGGTCTTGTTTTGCTGGCAGATGAGGTTTATCAAGAAAATGTTTATGTACCTGATAAGGAGTTTCATTCATTCAAGAAGGTATCCCGGTCTATGGGATATGGCGAGCAGGATATTTCTCTGGTATCATTTCAGTCAGTCTCTAAAGGGTTCTACGGGGAGTGTGGAAAAAGAGGTGGTTACATGGAAGTCACTGGAATCAGTCCTGAAGTAAGGGAACAAGTATACAAAATGGCATCCGTAAATCTTTGTTCTAATATCTCTGGTCAAATTCTTGCAAGCCTTGTCATGAGTCCACCAAAGGTTGGAGATGAATCCTATGAAATGTATTTGGCCGAGAAGGATGGAATTCTGTCATCCCTAGCAAGGCGTGCGAAGGCATTAGAAGAAGCATGGAATAGCTTAGAGGGTGTGACATGCAACAGAGCAGAAGGAGCACTGTATCTCTTTCCCTGCATAAAATTGCCTCAAAAGGCAATTAAAGCAGCGGAGGCTGCAACGACAGCCCCAGATGCATTCTATTGTCGCCGCCTTCTCAATGCCACAGGCATTGTGGTCGTTCCTGGTTCTGGTTTTGGGCAGGTTCTGGGCACCTGGCATTTCAGATGCACCATATTGCCTCAAGAGGATAAAATTCCAGCCATTGTCACCCGTCTGACAGACTTCCACAAGTCGTTCATGGACGAGTTCCGCGACTAG

Protein Analysis

535

Amino Acids

58.69

Weight (kDa)

5.94

Isoelectric Point (pI)

48.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1477
AccB1I GGYRCC 1 cut(s) 1496
AccB7I CCANNNNNTGG 1 cut(s) 1211
AccBSI CCGCTC 2 cut(s) 134, 442
AccI GTMKAC 1 cut(s) 1131
AccII CGCG 1 cut(s) 1599
AciI CCGC 8 cut(s) 4, 18, 132, 442, 880, 1394, 1435, 1597
AclWI GGATC 2 cut(s) 468, 604
AcoI YGGCCR 1 cut(s) 1239
AcsI RAATTY 5 cut(s) 8, 465, 1176, 1254, 1539
AcuI CTGAAG 2 cut(s) 161, 1134
AfaI GTAC 2 cut(s) 686, 957
AfiI CCNNNNNNNGG 4 cut(s) 1000, 1211, 1272, 1475
AgsI TTSAA 5 cut(s) 202, 545, 696, 775, 982
AjnI CCWGG 4 cut(s) 469, 838, 1468, 1499
AjuI GAANNNNNNNTTGG 2 cut(s) 767, 799
AluBI AGCT 4 cut(s) 78, 140, 548, 1308
AluI AGCT 4 cut(s) 78, 140, 548, 1308
Alw21I GWGCWC 1 cut(s) 1345
Alw26I GTCTC 2 cut(s) 333, 1051
AlwI GGATC 2 cut(s) 468, 604
AlwNI CAGNNNCTG 2 cut(s) 457, 1492
AoxI GGCC 2 cut(s) 819, 1239
ApeKI GCWGC 3 cut(s) 533, 1391, 1400
ApoI RAATTY 5 cut(s) 8, 465, 1176, 1254, 1539
AspS9I GGNCC 1 cut(s) 819
AsuC2I CCSGG 2 cut(s) 276, 994
AsuHPI GGTGA 3 cut(s) 226, 236, 1546
BaeGI GKGCMC 1 cut(s) 1499
BanI GGYRCC 1 cut(s) 1496
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 1345
BbvI GCAGC 3 cut(s) 520, 1387, 1403
BccI CCATC 6 cut(s) 390, 398, 548, 587, 644, 1244
BcgI CGANNNNNNTGC 2 cut(s) 1444, 1478
BciT130I CCWGG 4 cut(s) 471, 840, 1470, 1501
BciVI GTATCC 1 cut(s) 1000
BcnI CCSGG 2 cut(s) 276, 994
BcoDI GTCTC 2 cut(s) 333, 1051
BfaI CTAG 2 cut(s) 1268, 1603
BfmI CTRYAG 1 cut(s) 141
BfuAI ACCTGC 1 cut(s) 1477
BfuI GTATCC 1 cut(s) 1000
BisI GCNGC 7 cut(s) 19, 132, 534, 881, 1392, 1401, 1435
BlsI GCNGC 7 cut(s) 20, 133, 535, 882, 1393, 1402, 1436
Bme1390I CCNGG 6 cut(s) 276, 471, 840, 994, 1470, 1501
BmgT120I GGNCC 1 cut(s) 819
BmiI GGNNCC 2 cut(s) 723, 1498
BmrFI CCNGG 6 cut(s) 276, 471, 840, 994, 1470, 1501
BmsI GCATC 7 cut(s) 421, 612, 752, 781, 1151, 1408, 1502
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 120
BpuEI CTTGAG 1 cut(s) 1512
BpuMI CCSGG 2 cut(s) 276, 994
BsaAI YACGTR 1 cut(s) 521
BsaBI GATNNNNATC 1 cut(s) 558
BsaJI CCNNGG 7 cut(s) 168, 192, 220, 706, 801, 822, 867
Bsc4I CCNNNNNNNGG 4 cut(s) 1000, 1211, 1272, 1475
Bse1I ACTGG 3 cut(s) 487, 723, 1105
Bse8I GATNNNNATC 1 cut(s) 558
BseBI CCWGG 4 cut(s) 471, 840, 1470, 1501
BseDI CCNNGG 7 cut(s) 168, 192, 220, 706, 801, 822, 867
BseGI GGATG 9 cut(s) 39, 283, 382, 568, 655, 796, 1142, 1255, 1262
BseJI GATNNNNATC 1 cut(s) 558
BseLI CCNNNNNNNGG 4 cut(s) 1000, 1211, 1272, 1475
BseMII CTCAG 2 cut(s) 338, 759
BseNI ACTGG 3 cut(s) 487, 723, 1105
BseRI GAGGAG 1 cut(s) 70
BseSI GKGCMC 1 cut(s) 1499
BseXI GCAGC 3 cut(s) 520, 1387, 1403
Bsh1236I CGCG 1 cut(s) 1599
BshFI GGCC 2 cut(s) 821, 1241
BshNI GGYRCC 1 cut(s) 1496
BsiHKAI GWGCWC 1 cut(s) 1345
BsiSI CCGG 2 cut(s) 276, 994
BslFI GGGAC 1 cut(s) 648
BslI CCNNNNNNNGG 4 cut(s) 1000, 1211, 1272, 1475
BsmAI GTCTC 2 cut(s) 333, 1051
BsmFI GGGAC 1 cut(s) 648
BsmI GAATGC 1 cut(s) 1421
BsnI GGCC 2 cut(s) 821, 1241
Bsp1286I GDGCHC 2 cut(s) 1345, 1499
Bsp143I GATC 2 cut(s) 460, 609
Bsp19I CCATGG 1 cut(s) 168
BspACI CCGC 8 cut(s) 4, 18, 132, 442, 880, 1394, 1435, 1597
BspANI GGCC 2 cut(s) 821, 1241
BspCNI CTCAG 2 cut(s) 337, 760
BspFNI CGCG 1 cut(s) 1599
BspHI TCATGA 1 cut(s) 1194
BspLI GGNNCC 2 cut(s) 723, 1498
BspMI ACCTGC 1 cut(s) 1477
BspPI GGATC 2 cut(s) 468, 604
BspQI GCTCTTC 2 cut(s) 180, 469
BspT107I GGYRCC 1 cut(s) 1496
BsrBI CCGCTC 2 cut(s) 134, 442
BsrI ACTGG 3 cut(s) 487, 723, 1105
BssECI CCNNGG 7 cut(s) 168, 192, 220, 706, 801, 822, 867
BssMI GATC 2 cut(s) 460, 609
BssNAI GTATAC 1 cut(s) 1132
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 4 cut(s) 168, 192, 801, 822
Bst1107I GTATAC 1 cut(s) 1132
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 4 cut(s) 471, 840, 1470, 1501
Bst4CI ACNGT 3 cut(s) 500, 710, 1347
Bst6I CTCTTC 5 cut(s) 88, 103, 165, 180, 469
BstAPI GCANNNNNTGC 3 cut(s) 485, 605, 1277
BstBAI YACGTR 1 cut(s) 521
BstC8I GCNNGC 8 cut(s) 16, 444, 601, 902, 924, 1013, 1186, 1278
BstDEI CTNAG 3 cut(s) 324, 768, 1309
BstDSI CCRYGG 2 cut(s) 168, 706
BstEII GGTNACC 1 cut(s) 232
BstF5I GGATG 9 cut(s) 39, 283, 382, 568, 655, 796, 1142, 1255, 1262
BstFNI CGCG 1 cut(s) 1599
BstKTI GATC 2 cut(s) 463, 612
BstMAI GTCTC 2 cut(s) 333, 1051
BstMBI GATC 2 cut(s) 460, 609
BstNI CCWGG 4 cut(s) 471, 840, 1470, 1501
BstNSI RCATGY 1 cut(s) 1326
BstPI GGTNACC 1 cut(s) 232
BstSCI CCNGG 6 cut(s) 274, 469, 838, 992, 1468, 1499
BstSFI CTRYAG 1 cut(s) 141
BstSLI GKGCMC 1 cut(s) 1499
BstUI CGCG 1 cut(s) 1599
BstV1I GCAGC 3 cut(s) 520, 1387, 1403
BstV2I GAAGAC 1 cut(s) 114
BstZ17I GTATAC 1 cut(s) 1132
BsuI GTATCC 1 cut(s) 1000
BsuRI GGCC 2 cut(s) 821, 1241
BtgI CCRYGG 2 cut(s) 168, 706
BtsCI GGATG 9 cut(s) 39, 283, 382, 568, 655, 796, 1142, 1255, 1262
BtsIMutI CAGTG 4 cut(s) 430, 716, 1098, 1343
BveI ACCTGC 1 cut(s) 1477
Cac8I GCNNGC 8 cut(s) 16, 444, 601, 902, 924, 1013, 1186, 1278
CaiI CAGNNNCTG 2 cut(s) 457, 1492
CciI TCATGA 1 cut(s) 1194
Cfr13I GGNCC 1 cut(s) 819
Csp6I GTAC 2 cut(s) 685, 956
CspCI CAANNNNNGTGG 2 cut(s) 1438, 1473
CviAII CATG 7 cut(s) 169, 447, 1090, 1195, 1299, 1323, 1585
CviQI GTAC 2 cut(s) 685, 956
DdeI CTNAG 3 cut(s) 324, 768, 1309
DpnI GATC 2 cut(s) 462, 611
DpnII GATC 2 cut(s) 460, 609
EaeI YGGCCR 1 cut(s) 1239
Eam1104I CTCTTC 5 cut(s) 88, 103, 165, 180, 469
EarI CTCTTC 5 cut(s) 88, 103, 165, 180, 469
Eco130I CCWWGG 4 cut(s) 168, 192, 801, 822
Eco32I GATATC 1 cut(s) 560
Eco57I CTGAAG 2 cut(s) 161, 1134
Eco91I GGTNACC 1 cut(s) 232
EcoO109I RGGNCCY 1 cut(s) 819
EcoO65I GGTNACC 1 cut(s) 232
EcoRI GAATTC 1 cut(s) 1254
EcoRII CCWGG 4 cut(s) 469, 838, 1468, 1499
EcoRV GATATC 1 cut(s) 560
EcoT14I CCWWGG 4 cut(s) 168, 192, 801, 822
EcoT22I ATGCAT 1 cut(s) 1423
ErhI CCWWGG 4 cut(s) 168, 192, 801, 822
FaeI CATG 7 cut(s) 172, 450, 1093, 1198, 1302, 1326, 1588
FalI AAGNNNNNCTT 4 cut(s) 67, 99, 897, 929
FaqI GGGAC 1 cut(s) 648
FatI CATG 7 cut(s) 168, 446, 1089, 1194, 1298, 1322, 1584
FauI CCCGC 1 cut(s) 435
FauNDI CATATG 1 cut(s) 615
FblI GTMKAC 1 cut(s) 1131
Fnu4HI GCNGC 7 cut(s) 19, 132, 534, 881, 1392, 1401, 1435
FokI GGATG 9 cut(s) 26, 270, 369, 555, 662, 803, 1129, 1249, 1262
Fsp4HI GCNGC 7 cut(s) 19, 132, 534, 881, 1392, 1401, 1435
FspBI CTAG 2 cut(s) 1268, 1603
GluI GCNGC 7 cut(s) 19, 132, 534, 881, 1392, 1401, 1435
GsuI CTGGAG 1 cut(s) 120
HaeIII GGCC 2 cut(s) 821, 1241
HapII CCGG 2 cut(s) 276, 994
Hin1II CATG 7 cut(s) 172, 450, 1093, 1198, 1302, 1326, 1588
HinfI GANTC 8 cut(s) 64, 271, 298, 454, 655, 1104, 1198, 1220
HpaII CCGG 2 cut(s) 276, 994
HphI GGTGA 3 cut(s) 226, 236, 1546
Hpy166II GTNNAC 4 cut(s) 518, 892, 1132, 1202
Hpy188I TCNGA 9 cut(s) 180, 221, 317, 359, 573, 643, 769, 1511, 1563
Hpy188III TCNNGA 8 cut(s) 458, 551, 734, 941, 982, 1112, 1195, 1529
Hpy8I GTNNAC 4 cut(s) 518, 892, 1132, 1202
HpyAV CCTTC 9 cut(s) 136, 165, 640, 902, 979, 1240, 1276, 1331, 1448
HpyCH4III ACNGT 3 cut(s) 500, 710, 1347
HpyCH4IV ACGT 1 cut(s) 520
HpyF3I CTNAG 3 cut(s) 324, 768, 1309
HpySE526I ACGT 1 cut(s) 520
Hsp92II CATG 7 cut(s) 172, 450, 1093, 1198, 1302, 1326, 1588
Kzo9I GATC 2 cut(s) 460, 609
LguI GCTCTTC 2 cut(s) 180, 469
LmnI GCTCC 3 cut(s) 83, 139, 1340
Lsp1109I GCAGC 3 cut(s) 520, 1387, 1403
LweI GCATC 7 cut(s) 421, 612, 752, 781, 1151, 1408, 1502
MaeI CTAG 2 cut(s) 1268, 1603
MaeII ACGT 1 cut(s) 520
MaeIII GTNAC 9 cut(s) 108, 232, 249, 377, 494, 1085, 1096, 1318, 1552
MalI GATC 2 cut(s) 462, 611
MbiI CCGCTC 2 cut(s) 134, 442
MboI GATC 2 cut(s) 460, 609
MfeI CAATTG 4 cut(s) 528, 626, 696, 782
MhlI GDGCHC 2 cut(s) 1345, 1499
MlyI GAGTC 1 cut(s) 1207
MmeI TCCRAC 2 cut(s) 95, 1192
Mph1103I ATGCAT 1 cut(s) 1423
MseI TTAA 3 cut(s) 263, 587, 1386
MslI CAYNNNNRTG 2 cut(s) 573, 748
MspA1I CMGCKG 3 cut(s) 140, 880, 1394
MspI CCGG 2 cut(s) 276, 994
MspR9I CCNGG 6 cut(s) 276, 471, 840, 994, 1470, 1501
MunI CAATTG 4 cut(s) 528, 626, 696, 782
Mva1269I GAATGC 1 cut(s) 1421
MvaI CCWGG 4 cut(s) 471, 840, 1470, 1501
MvnI CGCG 1 cut(s) 1599
NciI CCSGG 2 cut(s) 276, 994
NcoI CCATGG 1 cut(s) 168
NdeI CATATG 1 cut(s) 615
NdeII GATC 2 cut(s) 460, 609
NlaIII CATG 7 cut(s) 172, 450, 1093, 1198, 1302, 1326, 1588
NlaIV GGNNCC 2 cut(s) 723, 1498
NmeAIII GCCGAG 2 cut(s) 892, 1267
NmuCI GTSAC 7 cut(s) 108, 232, 377, 494, 1096, 1318, 1552
NsiI ATGCAT 1 cut(s) 1423
NspI RCATGY 1 cut(s) 1326
PagI TCATGA 1 cut(s) 1194
PciSI GCTCTTC 2 cut(s) 180, 469
PcsI WCGNNNNNNNCGW 1 cut(s) 1596
PctI GAATGC 1 cut(s) 1421
PfeI GAWTC 7 cut(s) 64, 271, 298, 454, 655, 1104, 1220
PflMI CCANNNNNTGG 1 cut(s) 1211
PfoI TCCNGGA 1 cut(s) 469
PkrI GCNGC 7 cut(s) 20, 133, 535, 882, 1393, 1402, 1436
PleI GAGTC 1 cut(s) 1206
PpsI GAGTC 1 cut(s) 1206
Ppu21I YACGTR 1 cut(s) 521
Psp6I CCWGG 4 cut(s) 469, 838, 1468, 1499
PspEI GGTNACC 1 cut(s) 232
PspGI CCWGG 4 cut(s) 469, 838, 1468, 1499
PspN4I GGNNCC 2 cut(s) 723, 1498
PspPI GGNCC 1 cut(s) 819
PstNI CAGNNNCTG 2 cut(s) 457, 1492
PvuII CAGCTG 1 cut(s) 140
RsaI GTAC 2 cut(s) 686, 957
RsaNI GTAC 2 cut(s) 685, 956
RseI CAYNNNNRTG 2 cut(s) 573, 748
SapI GCTCTTC 2 cut(s) 180, 469
SaqAI TTAA 3 cut(s) 263, 587, 1386
SatI GCNGC 7 cut(s) 19, 132, 534, 881, 1392, 1401, 1435
Sau3AI GATC 2 cut(s) 460, 609
Sau96I GGNCC 1 cut(s) 819
SchI GAGTC 1 cut(s) 1207
ScrFI CCNGG 6 cut(s) 276, 471, 840, 994, 1470, 1501
SduI GDGCHC 2 cut(s) 1345, 1499
SfaNI GCATC 7 cut(s) 421, 612, 752, 781, 1151, 1408, 1502
SfcI CTRYAG 1 cut(s) 141
SmiMI CAYNNNNRTG 2 cut(s) 573, 748
SmlI CTYRAG 1 cut(s) 1527
SmoI CTYRAG 1 cut(s) 1527
SsiI CCGC 8 cut(s) 4, 18, 132, 442, 880, 1394, 1435, 1597
SspMI CTAG 2 cut(s) 1268, 1603
StyD4I CCNGG 6 cut(s) 274, 469, 838, 992, 1468, 1499
StyI CCWWGG 4 cut(s) 168, 192, 801, 822
TaaI ACNGT 3 cut(s) 500, 710, 1347
TaiI ACGT 1 cut(s) 523
TaqII GACCGA 1 cut(s) 96
TatI WGTACW 1 cut(s) 684
TauI GCSGC 4 cut(s) 21, 134, 883, 1437
TfiI GAWTC 7 cut(s) 64, 271, 298, 454, 655, 1104, 1220
Tru1I TTAA 3 cut(s) 263, 587, 1386
Tru9I TTAA 3 cut(s) 263, 587, 1386
TscAI CASTG 4 cut(s) 430, 723, 1105, 1350
TseFI GTSAC 7 cut(s) 108, 232, 377, 494, 1096, 1318, 1552
TseI GCWGC 3 cut(s) 533, 1391, 1400
Tsp45I GTSAC 7 cut(s) 108, 232, 377, 494, 1096, 1318, 1552
TspDTI ATGAA 5 cut(s) 962, 966, 1233, 1242, 1573
TspGWI ACGGA 2 cut(s) 32, 1135
TspRI CASTG 4 cut(s) 430, 723, 1105, 1350
Van91I CCANNNNNTGG 1 cut(s) 1211
XapI RAATTY 5 cut(s) 8, 465, 1176, 1254, 1539
XceI RCATGY 1 cut(s) 1326
XcmI CCANNNNNNNNNTGG 1 cut(s) 1456
XmiI GTMKAC 1 cut(s) 1131
XspI CTAG 2 cut(s) 1268, 1603
Zsp2I ATGCAT 1 cut(s) 1423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.