Rh2BG472600

Alanine aminotransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
66707179 .. 66711825
4647 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG472600.1

Sequence Viewer

Length: 1272 bp
ATGATTGTATTGTTTTTTTTTTTTTTTCAGGTTCTTGCATTGTGTGACCATCCATCCATCTTGGACAAGAGTGAAACGCAAGGCTTGTTCAGCGCCGATTCAATTGAGCGGGCATGGGAGGTTCTAGATCAAATTCCTGGAAGAGCAACTGGTGCTTACAGTCACAGTCAGGGTCTCAAGGGGTTACGTGACACAATTGCTGCTGGAATTGAAGCTCGTGATGGATATCCTTCTGATCCAAATGATCTTTTCTTAACAGATGGTGCAAGCCCTGCGGTCCATATGATGTTGACATTGCTGTTAAGATCAGAAAAGGATGGGATTCTTTGTCCCATTCCTCAATACCCTTTGTACTCCGCTTCAATTGCGCTCCATGGTGGCACACTGGTTCCTTACTATCTTGATGAGGCATCAGGGTGGGGATTGGAAATTTCTGACTTGAAGAAGCAACTAGAGGATGCAAAGTCTAAGGGTGTCAGTGTAAGAGCCTTGGTTGTTATAAATCCAGGCAACCCAACCGGGCAGGTTCTTGCTGAGGACAACCAACGGCAGATTGTGGAGTTCTGCAAGCAAGAAGGTCTTGTTTTACTGGCAGATGAGGTATATCAAGAGAACATATATGTTCCTGATAAGGAGTTTCATTCATTCAAGAAGGTAGCAAGGTCTATGGGATACGGTGAGACGGATATTCCACTGGTATCTTTTCAATCAGTCTCTAAAGGGTACTACGGGGAGTGTGGAAAAAGAGGTGGATACATGGAAGTCACTGGATTTAGTCCTGAAGTGAGGGAACAAATATACAAAATGGCATCGGTCAATCTTTGTTCTAATATCAGTGGTCAAATTCTTGCAAGCCTAGTCATGAGTCCACCAAAGGTTGGAGATGAATCCTATGAATTGTATCTTTCAGAGAAAGATGGAATTCTGTCATCCCTAAAAAAGCGTGCAAAGACACTAGAGGATGCGTTGAACAGCCTGGAGGGTGTGACATGCAACAGAGCTGAGGGGGCAATGTATCTGTTTCCTCGCATAGACCTGCCTCAAAAGGCAATCAAAGCAGCAGAGGCTGAAAAGACAGCTCCAGATGCATTCTATTGCAAACGTCTTCTGAATGCCACTGGAATTGTTGTTGTTCCTGGTTCTGGTTTCGGGCAGGTTCCTGGCACCTGGCATTTTAGATGCACAATCTTGCCTCAAGAGGATAAAATTCCAGCTATCGTCAACCGTCTAACAGAGTTTCACAAAAAGTTCATGGACGAGTTTCGCGACTAG

Protein Analysis

423

Amino Acids

46.66

Weight (kDa)

5.22

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 38 - 404 3.1e-41 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 500
Acc36I ACCTGC 3 cut(s) 514, 1044, 1144
AccB1I GGYRCC 1 cut(s) 1163
AccB7I CCANNNNNTGG 1 cut(s) 878
AccBSI CCGCTC 1 cut(s) 109
AccII CGCG 1 cut(s) 1266
AciI CCGC 3 cut(s) 109, 275, 357
AclWI GGATC 1 cut(s) 230
AcsI RAATTY 5 cut(s) 132, 429, 843, 921, 1206
AcuI CTGAAG 1 cut(s) 801
AfaI GTAC 2 cut(s) 353, 725
AfiI CCNNNNNNNGG 2 cut(s) 878, 1142
AgsI TTSAA 7 cut(s) 102, 212, 363, 442, 649, 707, 970
AjnI CCWGG 6 cut(s) 136, 505, 975, 1135, 1159, 1166
AluBI AGCT 4 cut(s) 215, 1001, 1079, 1214
AluI AGCT 4 cut(s) 215, 1001, 1079, 1214
Alw26I GTCTC 3 cut(s) 179, 674, 718
AlwI GGATC 1 cut(s) 230
AlwNI CAGNNNCTG 1 cut(s) 1067
ApeKI GCWGC 2 cut(s) 200, 1058
ApoI RAATTY 5 cut(s) 132, 429, 843, 921, 1206
AspLEI GCGC 2 cut(s) 95, 370
AspS9I GGNCC 1 cut(s) 277
AsuC2I CCSGG 1 cut(s) 520
AsuHPI GGTGA 1 cut(s) 689
AvaII GGWCC 1 cut(s) 277
BanI GGYRCC 1 cut(s) 1163
BauI CACGAG 1 cut(s) 216
BbsI GAAGAC 1 cut(s) 1097
BbvCI CCTCAGC 2 cut(s) 534, 1002
BbvI GCAGC 2 cut(s) 187, 1070
BccI CCATC 7 cut(s) 57, 61, 65, 215, 254, 311, 911
BceAI ACGGC 1 cut(s) 563
BciT130I CCWGG 6 cut(s) 138, 507, 977, 1137, 1161, 1168
BciVI GTATCC 2 cut(s) 665, 746
BcnI CCSGG 1 cut(s) 520
BcoDI GTCTC 3 cut(s) 179, 674, 718
BfaI CTAG 5 cut(s) 125, 452, 857, 956, 1270
BfoI RGCGCY 1 cut(s) 96
BfuAI ACCTGC 3 cut(s) 514, 1044, 1144
BfuI GTATCC 2 cut(s) 665, 746
BisI GCNGC 2 cut(s) 201, 1059
BlsI GCNGC 2 cut(s) 202, 1060
Bme1390I CCNGG 7 cut(s) 138, 507, 520, 977, 1137, 1161, 1168
Bme18I GGWCC 1 cut(s) 277
BmgT120I GGNCC 1 cut(s) 277
BmiI GGNNCC 3 cut(s) 390, 1158, 1165
BmrFI CCNGG 7 cut(s) 138, 507, 520, 977, 1137, 1161, 1168
BmsI GCATC 6 cut(s) 419, 448, 818, 952, 1075, 1169
BpiI GAAGAC 1 cut(s) 1097
BpmI CTGGAG 2 cut(s) 998, 1065
Bpu10I CCTNAGC 2 cut(s) 534, 1002
BpuEI CTTGAG 2 cut(s) 161, 1179
BpuMI CCSGG 1 cut(s) 520
BsaAI YACGTR 1 cut(s) 188
BsaBI GATNNNNATC 1 cut(s) 225
BsaI GGTCTC 1 cut(s) 179
BsaJI CCNNGG 2 cut(s) 373, 489
Bsc4I CCNNNNNNNGG 2 cut(s) 878, 1142
Bse1I ACTGG 6 cut(s) 154, 390, 594, 699, 772, 1123
Bse3DI GCAATG 2 cut(s) 293, 1017
Bse8I GATNNNNATC 1 cut(s) 225
BseBI CCWGG 6 cut(s) 138, 507, 977, 1137, 1161, 1168
BseDI CCNNGG 2 cut(s) 373, 489
BseGI GGATG 6 cut(s) 49, 53, 322, 463, 929, 967
BseJI GATNNNNATC 1 cut(s) 225
BseLI CCNNNNNNNGG 2 cut(s) 878, 1142
BseMI GCAATG 2 cut(s) 293, 1017
BseMII CTCAG 2 cut(s) 525, 993
BseNI ACTGG 6 cut(s) 154, 390, 594, 699, 772, 1123
BseXI GCAGC 2 cut(s) 187, 1070
Bsh1236I CGCG 1 cut(s) 1266
BshNI GGYRCC 1 cut(s) 1163
BsiSI CCGG 1 cut(s) 519
BslFI GGGAC 1 cut(s) 315
BslI CCNNNNNNNGG 2 cut(s) 878, 1142
BsmAI GTCTC 3 cut(s) 179, 674, 718
BsmBI CGTCTC 1 cut(s) 674
BsmFI GGGAC 1 cut(s) 315
BsmI GAATGC 2 cut(s) 1088, 1117
Bso31I GGTCTC 1 cut(s) 179
Bsp143I GATC 4 cut(s) 127, 235, 244, 305
Bsp19I CCATGG 1 cut(s) 373
Bsp68I TCGCGA 1 cut(s) 1266
BspACI CCGC 3 cut(s) 109, 275, 357
BspCNI CTCAG 2 cut(s) 526, 994
BspFNI CGCG 1 cut(s) 1266
BspHI TCATGA 1 cut(s) 861
BspLI GGNNCC 3 cut(s) 390, 1158, 1165
BspMI ACCTGC 3 cut(s) 514, 1044, 1144
BspPI GGATC 1 cut(s) 230
BspQI GCTCTTC 1 cut(s) 136
BspT107I GGYRCC 1 cut(s) 1163
BspTNI GGTCTC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 109
BsrDI GCAATG 2 cut(s) 293, 1017
BsrI ACTGG 6 cut(s) 154, 390, 594, 699, 772, 1123
BssECI CCNNGG 2 cut(s) 373, 489
BssMI GATC 4 cut(s) 127, 235, 244, 305
BssSI CACGAG 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 373, 489
Bst2BI CACGAG 1 cut(s) 216
Bst2UI CCWGG 6 cut(s) 138, 507, 977, 1137, 1161, 1168
Bst4CI ACNGT 4 cut(s) 161, 167, 677, 1226
Bst6I CTCTTC 1 cut(s) 136
BstAPI GCANNNNNTGC 2 cut(s) 152, 272
BstBAI YACGTR 1 cut(s) 188
BstC8I GCNNGC 5 cut(s) 111, 268, 569, 853, 945
BstDEI CTNAG 3 cut(s) 468, 534, 1002
BstDSI CCRYGG 1 cut(s) 373
BstF5I GGATG 6 cut(s) 49, 53, 322, 463, 929, 967
BstFNI CGCG 1 cut(s) 1266
BstH2I RGCGCY 1 cut(s) 96
BstHHI GCGC 2 cut(s) 95, 370
BstKTI GATC 4 cut(s) 130, 238, 247, 308
BstMAI GTCTC 3 cut(s) 179, 674, 718
BstMBI GATC 4 cut(s) 127, 235, 244, 305
BstMWI GCNNNNNNNGC 8 cut(s) 90, 152, 272, 365, 1007, 1055, 1064, 1085
BstNI CCWGG 6 cut(s) 138, 507, 977, 1137, 1161, 1168
BstNSI RCATGY 1 cut(s) 993
BstSCI CCNGG 7 cut(s) 136, 505, 518, 975, 1135, 1159, 1166
BstUI CGCG 1 cut(s) 1266
BstV1I GCAGC 2 cut(s) 187, 1070
BstV2I GAAGAC 1 cut(s) 1097
BsuI GTATCC 2 cut(s) 665, 746
BtgI CCRYGG 1 cut(s) 373
BtsCI GGATG 6 cut(s) 49, 53, 322, 463, 929, 967
BtsIMutI CAGTG 6 cut(s) 383, 484, 692, 765, 841, 1116
BtuMI TCGCGA 1 cut(s) 1266
BveI ACCTGC 3 cut(s) 514, 1044, 1144
Cac8I GCNNGC 5 cut(s) 111, 268, 569, 853, 945
CaiI CAGNNNCTG 1 cut(s) 1067
CciI TCATGA 1 cut(s) 861
CfoI GCGC 2 cut(s) 95, 370
Cfr13I GGNCC 1 cut(s) 277
Csp6I GTAC 2 cut(s) 352, 724
CspCI CAANNNNNGTGG 2 cut(s) 1105, 1140
CviAII CATG 6 cut(s) 114, 374, 757, 862, 990, 1252
CviQI GTAC 2 cut(s) 352, 724
DdeI CTNAG 3 cut(s) 468, 534, 1002
DpnI GATC 4 cut(s) 129, 237, 246, 307
DpnII GATC 4 cut(s) 127, 235, 244, 305
Eam1104I CTCTTC 1 cut(s) 136
EarI CTCTTC 1 cut(s) 136
Eco130I CCWWGG 2 cut(s) 373, 489
Eco31I GGTCTC 1 cut(s) 179
Eco32I GATATC 1 cut(s) 227
Eco47I GGWCC 1 cut(s) 277
Eco57I CTGAAG 1 cut(s) 801
EcoRI GAATTC 1 cut(s) 921
EcoRII CCWGG 6 cut(s) 136, 505, 975, 1135, 1159, 1166
EcoRV GATATC 1 cut(s) 227
EcoT14I CCWWGG 2 cut(s) 373, 489
EcoT22I ATGCAT 1 cut(s) 1090
ErhI CCWWGG 2 cut(s) 373, 489
Esp3I CGTCTC 1 cut(s) 674
FaeI CATG 6 cut(s) 117, 377, 760, 865, 993, 1255
FalI AAGNNNNNCTT 2 cut(s) 564, 596
FaqI GGGAC 1 cut(s) 315
FatI CATG 6 cut(s) 113, 373, 756, 861, 989, 1251
FauI CCCGC 1 cut(s) 102
FauNDI CATATG 1 cut(s) 282
Fnu4HI GCNGC 2 cut(s) 201, 1059
FokI GGATG 6 cut(s) 36, 40, 329, 470, 916, 974
Fsp4HI GCNGC 2 cut(s) 201, 1059
FspBI CTAG 5 cut(s) 125, 452, 857, 956, 1270
GlaI GCGC 2 cut(s) 94, 369
GluI GCNGC 2 cut(s) 201, 1059
GsuI CTGGAG 2 cut(s) 998, 1065
HaeII RGCGCY 1 cut(s) 96
HapII CCGG 1 cut(s) 519
HhaI GCGC 2 cut(s) 95, 370
Hin1II CATG 6 cut(s) 117, 377, 760, 865, 993, 1255
Hin6I GCGC 2 cut(s) 93, 368
HinP1I GCGC 2 cut(s) 93, 368
HincII GTYRAC 2 cut(s) 291, 1222
HindII GTYRAC 2 cut(s) 291, 1222
HinfI GANTC 4 cut(s) 98, 322, 865, 887
HpaII CCGG 1 cut(s) 519
HphI GGTGA 1 cut(s) 689
Hpy166II GTNNAC 3 cut(s) 291, 869, 1222
Hpy188I TCNGA 5 cut(s) 235, 310, 436, 910, 1110
Hpy8I GTNNAC 3 cut(s) 291, 869, 1222
HpyAV CCTTC 3 cut(s) 240, 569, 646
HpyCH4III ACNGT 4 cut(s) 161, 167, 677, 1226
HpyCH4IV ACGT 2 cut(s) 187, 1102
HpyF10VI GCNNNNNNNGC 8 cut(s) 90, 152, 272, 365, 1007, 1055, 1064, 1085
HpyF3I CTNAG 3 cut(s) 468, 534, 1002
HpySE526I ACGT 2 cut(s) 187, 1102
Hsp92II CATG 6 cut(s) 117, 377, 760, 865, 993, 1255
HspAI GCGC 2 cut(s) 93, 368
Kzo9I GATC 4 cut(s) 127, 235, 244, 305
LguI GCTCTTC 1 cut(s) 136
LmnI GCTCC 2 cut(s) 375, 1084
Lsp1109I GCAGC 2 cut(s) 187, 1070
LweI GCATC 6 cut(s) 419, 448, 818, 952, 1075, 1169
MaeI CTAG 5 cut(s) 125, 452, 857, 956, 1270
MaeII ACGT 2 cut(s) 187, 1102
MaeIII GTNAC 6 cut(s) 44, 161, 183, 188, 763, 985
MalI GATC 4 cut(s) 129, 237, 246, 307
MbiI CCGCTC 1 cut(s) 109
MboI GATC 4 cut(s) 127, 235, 244, 305
MboII GAAGA 3 cut(s) 153, 454, 1097
MfeI CAATTG 3 cut(s) 102, 195, 363
MlyI GAGTC 1 cut(s) 874
MmeI TCCRAC 1 cut(s) 859
Mph1103I ATGCAT 1 cut(s) 1090
MseI TTAA 2 cut(s) 254, 302
MslI CAYNNNNRTG 1 cut(s) 415
MspI CCGG 1 cut(s) 519
MspR9I CCNGG 7 cut(s) 138, 507, 520, 977, 1137, 1161, 1168
MunI CAATTG 3 cut(s) 102, 195, 363
Mva1269I GAATGC 2 cut(s) 1088, 1117
MvaI CCWGG 6 cut(s) 138, 507, 977, 1137, 1161, 1168
MvnI CGCG 1 cut(s) 1266
MwoI GCNNNNNNNGC 8 cut(s) 90, 152, 272, 365, 1007, 1055, 1064, 1085
NciI CCSGG 1 cut(s) 520
NcoI CCATGG 1 cut(s) 373
NdeI CATATG 1 cut(s) 282
NdeII GATC 4 cut(s) 127, 235, 244, 305
NlaIII CATG 6 cut(s) 117, 377, 760, 865, 993, 1255
NlaIV GGNNCC 3 cut(s) 390, 1158, 1165
NmuCI GTSAC 5 cut(s) 44, 161, 188, 763, 985
NruI TCGCGA 1 cut(s) 1266
NsiI ATGCAT 1 cut(s) 1090
NspI RCATGY 1 cut(s) 993
PagI TCATGA 1 cut(s) 861
PciSI GCTCTTC 1 cut(s) 136
PcsI WCGNNNNNNNCGW 1 cut(s) 1263
PctI GAATGC 2 cut(s) 1088, 1117
PfeI GAWTC 3 cut(s) 98, 322, 887
PflMI CCANNNNNTGG 1 cut(s) 878
PfoI TCCNGGA 1 cut(s) 136
PkrI GCNGC 2 cut(s) 202, 1060
PleI GAGTC 1 cut(s) 873
PpsI GAGTC 1 cut(s) 873
Ppu21I YACGTR 1 cut(s) 188
PsiI TTATAA 1 cut(s) 500
Psp6I CCWGG 6 cut(s) 136, 505, 975, 1135, 1159, 1166
PspGI CCWGG 6 cut(s) 136, 505, 975, 1135, 1159, 1166
PspN4I GGNNCC 3 cut(s) 390, 1158, 1165
PspPI GGNCC 1 cut(s) 277
PstNI CAGNNNCTG 1 cut(s) 1067
RruI TCGCGA 1 cut(s) 1266
RsaI GTAC 2 cut(s) 353, 725
RsaNI GTAC 2 cut(s) 352, 724
RseI CAYNNNNRTG 1 cut(s) 415
SapI GCTCTTC 1 cut(s) 136
SaqAI TTAA 2 cut(s) 254, 302
SatI GCNGC 2 cut(s) 201, 1059
Sau3AI GATC 4 cut(s) 127, 235, 244, 305
Sau96I GGNCC 1 cut(s) 277
SchI GAGTC 1 cut(s) 874
ScrFI CCNGG 7 cut(s) 138, 507, 520, 977, 1137, 1161, 1168
SfaNI GCATC 6 cut(s) 419, 448, 818, 952, 1075, 1169
SinI GGWCC 1 cut(s) 277
SmiMI CAYNNNNRTG 1 cut(s) 415
SmlI CTYRAG 2 cut(s) 176, 1194
SmoI CTYRAG 2 cut(s) 176, 1194
SsiI CCGC 3 cut(s) 109, 275, 357
SspMI CTAG 5 cut(s) 125, 452, 857, 956, 1270
StyD4I CCNGG 7 cut(s) 136, 505, 518, 975, 1135, 1159, 1166
StyI CCWWGG 2 cut(s) 373, 489
TaaI ACNGT 4 cut(s) 161, 167, 677, 1226
TaiI ACGT 2 cut(s) 190, 1105
TaqII GACCGA 1 cut(s) 802
TatI WGTACW 1 cut(s) 351
TfiI GAWTC 3 cut(s) 98, 322, 887
Tru1I TTAA 2 cut(s) 254, 302
Tru9I TTAA 2 cut(s) 254, 302
TscAI CASTG 6 cut(s) 390, 484, 699, 772, 841, 1123
TseFI GTSAC 5 cut(s) 44, 161, 188, 763, 985
TseI GCWGC 2 cut(s) 200, 1058
Tsp45I GTSAC 5 cut(s) 44, 161, 188, 763, 985
TspDTI ATGAA 5 cut(s) 629, 633, 900, 909, 1240
TspGWI ACGGA 1 cut(s) 698
TspRI CASTG 6 cut(s) 390, 484, 699, 772, 841, 1123
Van91I CCANNNNNTGG 1 cut(s) 878
VpaK11BI GGWCC 1 cut(s) 277
XapI RAATTY 5 cut(s) 132, 429, 843, 921, 1206
XbaI TCTAGA 1 cut(s) 124
XceI RCATGY 1 cut(s) 993
XspI CTAG 5 cut(s) 125, 452, 857, 956, 1270
Zsp2I ATGCAT 1 cut(s) 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.