Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001857

Physical Location & Seq

Genomic Coordinates Reverse (-)

6493282 .. 6504165

Gene Structure 10884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G087700.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3321 bp

ATGACGTTGTTGGACAGAGAGCTCGTTTTTCTCATACTCCAGTACTTAAATGAAGCGAATGAAGGGAAATACAAGGACACTGTTCACAGGTTGGAAAAAGATTCAGGGTATTTCTTCAATATGAGGTATTTTGAGGATTGCTTGAACAATGGTGAATGGGATGAGGCGGACAGTTACCTGAGTGGATTTTGTAAGGTTGATGAAAGTAGATACTCAACGAAGATTTTCTTTGAGATTCGGAAACAAAAGTACTTTGAGGCCCTTGACAGGCATGACTATGCTAGAGCTGTCGATATTCTTCAGAAGGATTTGAAAGTTTTCTCGACAATCAACGAAGAGAAGTTTAAGGAAATGACCCTGCTTCTGTCGTTGGGGAATTTTAGGGAGAATGAGGAACTGTCAGATTATGGTGATATTAACTCTGCCAGGGCTGTTATACTTACTGAAGTAAAAAAGATAATTGAGGCAAGTCCACTTTTCCGTGATAAGCTGCAATTCCCCAAGTTAAAGAACTCAAGGCTGGGTACACTGATCAATCAGGGTTTAAATTGGCAGCATCACCTTTGCAATAATCCTAGGCCAAACCCTGACTTTAAAACTCTATTTTCGGACCATAGTTGTGGACATATTGCTTGTGCTCCTTCCCCTGCAATTAACCCTATAATGGGATCCATTGCTAAAGTAGGTGGTTTCCCCAGTTCAAGAAAAAAAAAAGTAGGTGGCTTCCCACCAATACGTGCTCATGTTCCATTTCAGCCTGCACCAGCACCTCTTACAACATCTCTCTCTGGATGGACAGCTAACCCGTCCTCTGTTCCACACCAAACAGTTTCTGCCAGACCAAGAGGTCTAACAGTTCCCAATAATGCATATTCTAAACACGTGTCCAAGAAGAGATCAAGACCTTTGGGGACGCCAGATAAGAGCCATGCCGATACCCTTCACTCTTCTGAGGACTTGCCGAAGACTGTTATTGTCAGTTTGAGTCAAGGTTCAGCTGTCAAGAGCATGGACTTTCATCCAATGCAACAGACTCTGCTTCTCGTTGGAACAAATATTGGCGATTTAACAATTTGGGAGGTAGGCAGCAGAGAGAGGCTTGTTTCTCGGAATTTCGAGATTTGGGACCTTGATGCATGTTCAATGGCTCTGCAGGCATCTGTGGCTTTTGAATACACTGCATCAGTCAATCGTGTTATCTGGAGTCCTGATGGTTCCCATATTGGTATTGGATATTCCAAGAGTGTAGTGCACGTATATTCCTATCATGGTGCTGATGATTTACGGAACCAACTAGAGATTGATGCTCATGTAGGTGAAGTTAATGATCTTGCCTTTACTCACCTAAACAAACAATTATGCATCATAAGTTGTGGAGAGGACAAGACCATCAAGGTCTGGGATGCTATCACTGGCAATAAGCTGTATAGTTTTGAAGGTCATGAAGCACCAGTTTATTCTGTGTGCGCACAGATGAAGGAAAACACTCAGTTCATCTTCTCTACAGCCATTGATGGGAAAATCAAGGCATGGCTCTATGATAACTTAGGTTCAAGAGTTGATTATCATGCTCCAGGCCATTCGTTCACAAGAATTGTCTATAGTACTGATGGAACGAGGTTATTCTCATGTGGGACTAATAAAGAAGGAGAATCATACATTGTGGAATGGGATGAAACCCAGGGGGCTGTAAAGCGAACTTATAATGGGCTTGGGAAGCAAACTCTGGGGGTCATGCAGTTTGATACGACCAAGAACCGATTCTTGGCTGCTGGTGATGAGTTCCAAATTAAATTTTGGGACATGGACAATGTGAACCTGTTGAATGCTACTAATGCGGAGGGTGGATTGCCGGCTTCTCCTTGTTTGCGATTTAACAAGGAAGGAATTATGTTGGCTGTTTCAACAAATGAGAATGGTATTAAAGTACTTGCAAATGCCGATGGTGTTCGACTTTTGCGGTCAATTGAGAATCGTGCAGTTGATGCCTCTGGGATGGCTTCTGGAAATGCTGTGAAGGGACCCATAATTGGCACATTTGGTGCTTCCGGTTCTGTTCATGGAACAAACAATGGGGTTGCAGATAGAAGTCAAGTGTCTACAGTAGTTGGTCTGAATGGAGATGCTCGAAGTTTGGACAAGAATTCAAGGGTTGCTGAGGAGTTAGAGAAACCTAAAACTTGGAAGCTAACTGAAGTTAATGAACCATCTCTTCTTCGTTCCATACGGCTTCCCGATAATTTGAACCTGATTGTTAGGTTGATATATGCAAACTCAGGAGGGTCTATATTGGCATTGACACATACTGGGGTACACCGACTTTGGAAATGGCAGAAGAATGAGCAGAATGTTTTGGGAAAAGCAACTACCACTGTGCCGCCTCTGTTATGGCAACCTCGCAGTGGTATATTGATGATGACCAATGATATAATCGATAGAAATCTTGAAGATTCGGTTCCTTCTTGCCTTGCTCTTTCCAATAATGATTCTTATGCTGTGTCAGCATCAGGAGGGAAAATTTCTCTTTTTAATACGGTGACATTCAAGACATTGGCAACCTTTATGCCTCCACCACCTGCAGCAACATTTGTTGCTTTCCATCCTGTGGACAATAACATTATTGCCGTGGGCATGGAGGATTCTACAATTCACTTGTTCCATGTCCCGATTGACACTGTCAAGTACAAGATCAAAGGTCATCAGAAGAGAGTAACTGGCCTGGCCTTCTCCACTGTTCTGAATGTTCTTGTATCATCAGGAGCTGATTCTCAGCTGTGTGTGTGGAGTCTGGATGGATGGGCAAAGCAGGCTGGTATGTTCTTGCAGATTCCCACTGGTCGCGTGCTTACACCTCTTGCTCAGACCCGAGTTCAATTTCACCAAGATCTGATACATCTGCTGGCAGTACATGAAACTCAAATAGCCATATATGAAGCATCAAAATTGGAGTGCCTTAAGAAGTGGGTGCCACGACAATCTCTTGGTCCTATCACAGATGCTACATATTCCTGTGATAGTGAGTCAATCTATGCAAGCTTTGAGGATGCTAGTGTATTTGTTCTAACTGCCTCCACGCTACGAATCAGATGTCGGATAAGCTCTGCTGCATATATAACGTCCAATCCCAGCGTGAGGGTGTACCCTGCTGTAGTTGCGGCTCATCCATCTGAGCCTAATCAGTTTGCGGTTGGACTCACTGATGGGGGAGTTGTTGTTATGGAGCCACCAGAATCAGAGGAGACGTGGGGTACTATGCCTCCAGTTGAGAATGCAGGCCCTAGTGCCGGCACTGCAGCTGGTTTGGATCAACAGCAAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0010014 GO:0010016 GO:0010072 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0090421

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

1107

Amino Acids

121.9

Weight (kDa)

6.54

Isoelectric Point (pI)

34.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15880 AT3G15880 AT3G15880 AT3G15880
fragaria_vesca	FvH4_1g02730 FvH4_1g02730 FvH4_1g02730 FvH4_1g02730 FvH4_1g02730 FvH4_1g02730
malus_domestica	MD02G1027700.v1.1 MD11G1043800.v1.1 MD15G1169300.v1.1
prunus_persica	Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.3G087700_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1 Prupe.7G247300_v2.0.a1
pyrus_communis	pycom12419g00020
rosa_chinensis	RchiOBHm_Chr2g0087841
rosa_laevigata	RLG00000015906 RLG00000019456
rosa_multiflora	Rmu_sc0008385.1_g000016
rosa_roxburghii	Rroxscaffold_2G00153180
rosa_rugosa	Rorug01G0479000 Rorug01G0479000 Rorug02G0324100 Rorug02G0324100
rosa_samantha	Rh2BG032700
rosa_wichuraiana	Rw2G002610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1704
AarI	CACCTGC	1 cut(s)	2584
AasI	GACNNNNNNGTC	1 cut(s)	846
Acc16I	TGCGCA	1 cut(s)	1468
Acc36I	ACCTGC	1 cut(s)	2584
AccB1I	GGYRCC	1 cut(s)	2965
AccB7I	CCANNNNNTGG	1 cut(s)	2605
AccI	GTMKAC	1 cut(s)	2099
AccII	CGCG	1 cut(s)	2841
AciI	CCGC	6 cut(s)	167, 1838, 1960, 2378, 3155, 3185
AclWI	GGATC	3 cut(s)	663, 676, 3312
AcsI	RAATTY	5 cut(s)	376, 1111, 1793, 2143, 2517
AcuI	CTGAAG	3 cut(s)	284, 465, 2214
AcvI	CACGTG	1 cut(s)	883
AcyI	GRCGYC	1 cut(s)	914
AflII	CTTAAG	1 cut(s)	2954
AflIII	ACRYGT	2 cut(s)	880, 882
AjiI	CACGTC	1 cut(s)	3243
AjnI	CCWGG	4 cut(s)	425, 1573, 1680, 2718
AjuI	GAANNNNNNNTTGG	4 cut(s)	1745, 1748, 1777, 1780
Alw21I	GWGCWC	4 cut(s)	24, 640, 742, 1254
Alw26I	GTCTC	1 cut(s)	3233
Alw44I	GTGCAC	1 cut(s)	1250
AlwI	GGATC	3 cut(s)	663, 676, 3312
AlwNI	CAGNNNCTG	3 cut(s)	833, 1036, 2762
Ama87I	CYCGRG	1 cut(s)	2865
AoxI	GGCC	6 cut(s)	258, 578, 1576, 2716, 2721, 3274
ApaLI	GTGCAC	1 cut(s)	1250
ApeKI	GCWGC	7 cut(s)	490, 553, 1086, 1769, 2579, 3104, 3293
ApoI	RAATTY	5 cut(s)	376, 1111, 1793, 2143, 2517
ArsI	GACNNNNNNTTYG	2 cut(s)	3073, 3105
Asp700I	GAANNNNTTC	3 cut(s)	224, 317, 1760
AspA2I	CCTAGG	1 cut(s)	575
AspLEI	GCGC	1 cut(s)	1469
AspS9I	GGNCC	6 cut(s)	259, 610, 1126, 2021, 2984, 3275
AsuHPI	GGTGA	8 cut(s)	164, 422, 551, 1328, 1334, 1787, 2548, 2870
AvaI	CYCGRG	1 cut(s)	2865
AvaII	GGWCC	4 cut(s)	610, 1126, 2021, 2984
AvrII	CCTAGG	1 cut(s)	575
BaeGI	GKGCMC	1 cut(s)	1254
BamHI	GGATCC	1 cut(s)	668
BanI	GGYRCC	1 cut(s)	2965
BanII	GRGCYC	1 cut(s)	24
BbrPI	CACGTG	1 cut(s)	883
BbsI	GAAGAC	1 cut(s)	971
Bbv12I	GWGCWC	4 cut(s)	24, 640, 742, 1254
BbvCI	CCTCAGC	1 cut(s)	2157
BbvI	GCAGC	7 cut(s)	477, 565, 1098, 1756, 2591, 3091, 3305
BceAI	ACGGC	2 cut(s)	2243, 2609
BciT130I	CCWGG	4 cut(s)	427, 1575, 1682, 2720
BclI	TGATCA	1 cut(s)	531
BcoDI	GTCTC	1 cut(s)	3233
BfaI	CTAG	5 cut(s)	282, 576, 1295, 3048, 3279
BfmI	CTRYAG	7 cut(s)	1151, 1503, 1600, 2100, 2577, 3147, 3291
BfrI	CTTAAG	1 cut(s)	2954
BfuAI	ACCTGC	1 cut(s)	2584
BglII	AGATCT	1 cut(s)	2884
BisI	GCNGC	9 cut(s)	491, 554, 1087, 1770, 2378, 2580, 3105, 3156, 3294
BlnI	CCTAGG	1 cut(s)	575
BlsI	GCNGC	9 cut(s)	492, 555, 1088, 1771, 2379, 2581, 3106, 3157, 3295
BmcAI	AGTACT	4 cut(s)	44, 251, 1606, 1929
Bme1390I	CCNGG	4 cut(s)	427, 1575, 1682, 2720
Bme18I	GGWCC	4 cut(s)	610, 1126, 2021, 2984
BmeT110I	CYCGRG	1 cut(s)	2865
BmgBI	CACGTC	1 cut(s)	3243
BmgT120I	GGNCC	6 cut(s)	259, 610, 1126, 2021, 2984, 3275
BmiI	GGNNCC	9 cut(s)	670, 1127, 1216, 1289, 2022, 2023, 2457, 2967, 3222
BmrFI	CCNGG	4 cut(s)	427, 1575, 1682, 2720
BmrI	ACTGGG	2 cut(s)	690, 2316
BmuI	ACTGGG	2 cut(s)	690, 2316
BpiI	GAAGAC	1 cut(s)	971
BpmI	CTGGAG	4 cut(s)	23, 1222, 1557, 3243
Bpu10I	CCTNAGC	1 cut(s)	2157
BpuEI	CTTGAG	1 cut(s)	499
Bsa29I	ATCGAT	1 cut(s)	2433
BsaAI	YACGTR	3 cut(s)	737, 883, 1255
BsaBI	GATNNNNATC	1 cut(s)	2439
BsaHI	GRCGYC	1 cut(s)	914
BsaJI	CCNNGG	5 cut(s)	426, 575, 1680, 1681, 2625
BsaWI	WCCGGW	1 cut(s)	2048
BsaXI	ACNNNNNCTCC	4 cut(s)	3198, 3228, 3241, 3271
Bse118I	RCCGGY	2 cut(s)	1852, 3284
Bse1I	ACTGG	8 cut(s)	40, 696, 1417, 1451, 2311, 2719, 2839, 3260
Bse3DI	GCAATG	1 cut(s)	672
Bse8I	GATNNNNATC	1 cut(s)	2439
BseBI	CCWGG	4 cut(s)	427, 1575, 1682, 2720
BseCI	ATCGAT	1 cut(s)	2433
BseDI	CCNNGG	5 cut(s)	426, 575, 1680, 1681, 2625
BseJI	GATNNNNATC	1 cut(s)	2439
BseMI	GCAATG	1 cut(s)	672
BseMII	CTCAG	8 cut(s)	170, 942, 1502, 2148, 2289, 2783, 2873, 3159
BseNI	ACTGG	8 cut(s)	40, 696, 1417, 1451, 2311, 2719, 2839, 3260
BseRI	GAGGAG	2 cut(s)	2174, 3251
BseSI	GKGCMC	1 cut(s)	1254
BseXI	GCAGC	7 cut(s)	477, 565, 1098, 1756, 2591, 3091, 3305
BseYI	CCCAGC	2 cut(s)	520, 3125
BsgI	GTGCAG	2 cut(s)	744, 1998
Bsh1236I	CGCG	1 cut(s)	2841
BshFI	GGCC	6 cut(s)	260, 580, 1578, 2718, 2723, 3276
BshNI	GGYRCC	1 cut(s)	2965
BshVI	ATCGAT	1 cut(s)	2433
BsiHKAI	GWGCWC	4 cut(s)	24, 640, 742, 1254
BsiHKCI	CYCGRG	1 cut(s)	2865
BsiSI	CCGG	3 cut(s)	1853, 2049, 3285
BslFI	GGGAC	6 cut(s)	925, 1139, 1648, 1814, 2034, 2648
BsmAI	GTCTC	1 cut(s)	3233
BsmBI	CGTCTC	1 cut(s)	3233
BsmFI	GGGAC	6 cut(s)	925, 1139, 1648, 1814, 2034, 2648
BsmI	GAATGC	2 cut(s)	1831, 3274
BsnI	GGCC	6 cut(s)	260, 580, 1578, 2718, 2723, 3276
BsoBI	CYCGRG	1 cut(s)	2865
Bsp1286I	GDGCHC	4 cut(s)	24, 640, 742, 1254
Bsp143I	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
BspACI	CCGC	6 cut(s)	167, 1838, 1960, 2378, 3155, 3185
BspANI	GGCC	6 cut(s)	260, 580, 1578, 2718, 2723, 3276
BspCNI	CTCAG	8 cut(s)	171, 943, 1501, 2149, 2288, 2782, 2872, 3160
BspDI	ATCGAT	1 cut(s)	2433
BspFNI	CGCG	1 cut(s)	2841
BspHI	TCATGA	1 cut(s)	1441
BspLI	GGNNCC	9 cut(s)	670, 1127, 1216, 1289, 2022, 2023, 2457, 2967, 3222
BspMAI	CTGCAG	3 cut(s)	1155, 2581, 3295
BspMI	ACCTGC	1 cut(s)	2584
BspPI	GGATC	3 cut(s)	663, 676, 3312
BspT107I	GGYRCC	1 cut(s)	2965
BspTI	CTTAAG	1 cut(s)	2954
BsrDI	GCAATG	1 cut(s)	672
BsrFI	RCCGGY	2 cut(s)	1852, 3284
BsrI	ACTGG	8 cut(s)	40, 696, 1417, 1451, 2311, 2719, 2839, 3260
BssAI	RCCGGY	2 cut(s)	1852, 3284
BssECI	CCNNGG	5 cut(s)	426, 575, 1680, 1681, 2625
BssMI	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
BssNI	GRCGYC	1 cut(s)	914
BssT1I	CCWWGG	1 cut(s)	575
Bst2UI	CCWGG	4 cut(s)	427, 1575, 1682, 2720
Bst6I	CTCTTC	5 cut(s)	330, 887, 952, 2217, 2699
BstACI	GRCGYC	1 cut(s)	914
BstAFI	CTTAAG	1 cut(s)	2954
BstAPI	GCANNNNNTGC	1 cut(s)	1985
BstBAI	YACGTR	3 cut(s)	737, 883, 1255
BstC8I	GCNNGC	9 cut(s)	759, 1155, 1854, 2808, 2843, 2901, 3034, 3274, 3286
BstDEI	CTNAG	9 cut(s)	179, 951, 1488, 1546, 2157, 2275, 2769, 2859, 3168
BstDSI	CCRYGG	1 cut(s)	2625
BstFNI	CGCG	1 cut(s)	2841
BstHHI	GCGC	1 cut(s)	1469
BstKTI	GATC	7 cut(s)	534, 671, 899, 1330, 2691, 2887, 3307
BstMAI	GTCTC	1 cut(s)	3233
BstMBI	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
BstMWI	GCNNNNNNNGC	9 cut(s)	1154, 1163, 1717, 1835, 1985, 2501, 2807, 3152, 3290
BstNI	CCWGG	4 cut(s)	427, 1575, 1682, 2720
BstNSI	RCATGY	1 cut(s)	1140
BstSCI	CCNGG	4 cut(s)	425, 1573, 1680, 2718
BstSFI	CTRYAG	7 cut(s)	1151, 1503, 1600, 2100, 2577, 3147, 3291
BstSLI	GKGCMC	1 cut(s)	1254
BstUI	CGCG	1 cut(s)	2841
BstV1I	GCAGC	7 cut(s)	477, 565, 1098, 1756, 2591, 3091, 3305
BstV2I	GAAGAC	1 cut(s)	971
BstX2I	RGATCY	2 cut(s)	668, 2884
BstXI	CCANNNNNNTGG	1 cut(s)	620
BstYI	RGATCY	2 cut(s)	668, 2884
Bsu15I	ATCGAT	1 cut(s)	2433
BsuRI	GGCC	6 cut(s)	260, 580, 1578, 2718, 2723, 3276
BsuTUI	ATCGAT	1 cut(s)	2433
BtgI	CCRYGG	1 cut(s)	2625
BtrI	CACGTC	1 cut(s)	3243
BtsI	GCAGTG	3 cut(s)	1176, 2407, 3288
BveI	ACCTGC	1 cut(s)	2584
Cac8I	GCNNGC	9 cut(s)	759, 1155, 1854, 2808, 2843, 2901, 3034, 3274, 3286
CaiI	CAGNNNCTG	3 cut(s)	833, 1036, 2762
CciI	TCATGA	1 cut(s)	1441
CfoI	GCGC	1 cut(s)	1469
Cfr10I	RCCGGY	2 cut(s)	1852, 3284
Cfr13I	GGNCC	6 cut(s)	259, 610, 1126, 2021, 2984, 3275
ClaI	ATCGAT	1 cut(s)	2433
CseI	GACGC	1 cut(s)	922
DdeI	CTNAG	9 cut(s)	179, 951, 1488, 1546, 2157, 2275, 2769, 2859, 3168
DpnI	GATC	7 cut(s)	533, 670, 898, 1329, 2690, 2886, 3306
DpnII	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
DraI	TTTAAA	2 cut(s)	546, 595
DrdI	GACNNNNNNGTC	1 cut(s)	846
DseDI	GACNNNNNNGTC	1 cut(s)	846
Eam1104I	CTCTTC	5 cut(s)	330, 887, 952, 2217, 2699
EarI	CTCTTC	5 cut(s)	330, 887, 952, 2217, 2699
EciI	GGCGGA	1 cut(s)	182
Ecl136II	GAGCTC	1 cut(s)	22
Eco130I	CCWWGG	1 cut(s)	575
Eco24I	GRGCYC	1 cut(s)	24
Eco47I	GGWCC	4 cut(s)	610, 1126, 2021, 2984
Eco53kI	GAGCTC	1 cut(s)	22
Eco57I	CTGAAG	3 cut(s)	284, 465, 2214
Eco72I	CACGTG	1 cut(s)	883
Eco88I	CYCGRG	1 cut(s)	2865
EcoICRI	GAGCTC	1 cut(s)	22
EcoO109I	RGGNCCY	4 cut(s)	259, 1126, 2021, 3275
EcoRI	GAATTC	1 cut(s)	2143
EcoRII	CCWGG	4 cut(s)	425, 1573, 1680, 2718
EcoT14I	CCWWGG	1 cut(s)	575
EcoT22I	ATGCAT	3 cut(s)	871, 1138, 1364
EcoT38I	GRGCYC	1 cut(s)	24
ErhI	CCWWGG	1 cut(s)	575
Esp3I	CGTCTC	1 cut(s)	3233
FalI	AAGNNNNNCTT	2 cut(s)	212, 244
FaqI	GGGAC	6 cut(s)	925, 1139, 1648, 1814, 2034, 2648
FbaI	TGATCA	1 cut(s)	531
FblI	GTMKAC	1 cut(s)	2099
Fnu4HI	GCNGC	9 cut(s)	491, 554, 1087, 1770, 2378, 2580, 3105, 3156, 3294
FriOI	GRGCYC	1 cut(s)	24
Fsp4HI	GCNGC	9 cut(s)	491, 554, 1087, 1770, 2378, 2580, 3105, 3156, 3294
FspAI	RTGCGCAY	1 cut(s)	1468
FspBI	CTAG	5 cut(s)	282, 576, 1295, 3048, 3279
FspI	TGCGCA	1 cut(s)	1468
GlaI	GCGC	1 cut(s)	1468
GluI	GCNGC	9 cut(s)	491, 554, 1087, 1770, 2378, 2580, 3105, 3156, 3294
GsaI	CCCAGC	2 cut(s)	524, 3129
GsuI	CTGGAG	4 cut(s)	23, 1222, 1557, 3243
HaeIII	GGCC	6 cut(s)	260, 580, 1578, 2718, 2723, 3276
HapII	CCGG	3 cut(s)	1853, 2049, 3285
HgaI	GACGC	1 cut(s)	922
HhaI	GCGC	1 cut(s)	1469
Hin1I	GRCGYC	1 cut(s)	914
Hin6I	GCGC	1 cut(s)	1467
HinP1I	GCGC	1 cut(s)	1467
HindIII	AAGCTT	1 cut(s)	3034
HpaII	CCGG	3 cut(s)	1853, 2049, 3285
HphI	GGTGA	8 cut(s)	164, 422, 551, 1328, 1334, 1787, 2548, 2870
HpyCH4IV	ACGT	6 cut(s)	5, 736, 882, 1254, 3116, 3242
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1154, 1163, 1717, 1835, 1985, 2501, 2807, 3152, 3290
HpyF3I	CTNAG	9 cut(s)	179, 951, 1488, 1546, 2157, 2275, 2769, 2859, 3168
HpySE526I	ACGT	6 cut(s)	5, 736, 882, 1254, 3116, 3242
Hsp92I	GRCGYC	1 cut(s)	914
HspAI	GCGC	1 cut(s)	1467
KflI	GGGWCCC	1 cut(s)	2021
KroI	GCCGGC	2 cut(s)	1852, 3284
KroNI	GCCGGC	2 cut(s)	1854, 3286
Ksp22I	TGATCA	1 cut(s)	531
Kzo9I	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
LmnI	GCTCC	4 cut(s)	643, 1576, 2759, 3220
Lsp1109I	GCAGC	7 cut(s)	477, 565, 1098, 1756, 2591, 3091, 3305
MaeI	CTAG	5 cut(s)	282, 576, 1295, 3048, 3279
MaeII	ACGT	6 cut(s)	5, 736, 882, 1254, 3116, 3242
MaeIII	GTNAC	3 cut(s)	173, 2536, 2710
MalI	GATC	7 cut(s)	533, 670, 898, 1329, 2690, 2886, 3306
MboI	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
MfeI	CAATTG	1 cut(s)	1965
MflI	RGATCY	2 cut(s)	668, 2884
MhlI	GDGCHC	4 cut(s)	24, 640, 742, 1254
MlyI	GAGTC	6 cut(s)	994, 1027, 1213, 2794, 3029, 3186
MmeI	TCCRAC	4 cut(s)	72, 1027, 3071, 3169
Mph1103I	ATGCAT	3 cut(s)	871, 1138, 1364
MroNI	GCCGGC	2 cut(s)	1852, 3284
MroXI	GAANNNNTTC	3 cut(s)	224, 317, 1760
MslI	CAYNNNNRTG	3 cut(s)	276, 618, 1314
MspA1I	CMGCKG	3 cut(s)	998, 2773, 3296
MspCI	CTTAAG	1 cut(s)	2954
MspI	CCGG	3 cut(s)	1853, 2049, 3285
MspR9I	CCNGG	4 cut(s)	427, 1575, 1682, 2720
MunI	CAATTG	1 cut(s)	1965
Mva1269I	GAATGC	2 cut(s)	1831, 3274
MvaI	CCWGG	4 cut(s)	427, 1575, 1682, 2720
MvnI	CGCG	1 cut(s)	2841
MwoI	GCNNNNNNNGC	9 cut(s)	1154, 1163, 1717, 1835, 1985, 2501, 2807, 3152, 3290
NaeI	GCCGGC	2 cut(s)	1854, 3286
NdeII	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
NgoMIV	GCCGGC	2 cut(s)	1852, 3284
NlaIV	GGNNCC	9 cut(s)	670, 1127, 1216, 1289, 2022, 2023, 2457, 2967, 3222
NmuCI	GTSAC	1 cut(s)	2536
NsbI	TGCGCA	1 cut(s)	1468
NsiI	ATGCAT	3 cut(s)	871, 1138, 1364
NspI	RCATGY	1 cut(s)	1140
PagI	TCATGA	1 cut(s)	1441
PaqCI	CACCTGC	1 cut(s)	2584
PasI	CCCWGGG	1 cut(s)	1681
PctI	GAATGC	2 cut(s)	1831, 3274
PdiI	GCCGGC	2 cut(s)	1854, 3286
PdmI	GAANNNNTTC	3 cut(s)	224, 317, 1760
PflFI	GACNNNGTC	1 cut(s)	2675
PflMI	CCANNNNNTGG	1 cut(s)	2605
PkrI	GCNGC	9 cut(s)	492, 555, 1088, 1771, 2379, 2581, 3106, 3157, 3295
PleI	GAGTC	6 cut(s)	993, 1027, 1212, 2793, 3028, 3186
PmaCI	CACGTG	1 cut(s)	883
PmlI	CACGTG	1 cut(s)	883
PpsI	GAGTC	6 cut(s)	993, 1027, 1212, 2793, 3028, 3186
Ppu21I	YACGTR	3 cut(s)	737, 883, 1255
PpuMI	RGGWCCY	2 cut(s)	1126, 2021
PsiI	TTATAA	1 cut(s)	1704
Psp124BI	GAGCTC	1 cut(s)	24
Psp5II	RGGWCCY	2 cut(s)	1126, 2021
Psp6I	CCWGG	4 cut(s)	425, 1573, 1680, 2718
PspCI	CACGTG	1 cut(s)	883
PspFI	CCCAGC	2 cut(s)	520, 3125
PspGI	CCWGG	4 cut(s)	425, 1573, 1680, 2718
PspN4I	GGNNCC	9 cut(s)	670, 1127, 1216, 1289, 2022, 2023, 2457, 2967, 3222
PspPI	GGNCC	6 cut(s)	259, 610, 1126, 2021, 2984, 3275
PspPPI	RGGWCCY	2 cut(s)	1126, 2021
PstI	CTGCAG	3 cut(s)	1155, 2581, 3295
PstNI	CAGNNNCTG	3 cut(s)	833, 1036, 2762
PsuI	RGATCY	2 cut(s)	668, 2884
PsyI	GACNNNGTC	1 cut(s)	2675
PvuII	CAGCTG	3 cut(s)	998, 2773, 3296
RseI	CAYNNNNRTG	3 cut(s)	276, 618, 1314
SacI	GAGCTC	1 cut(s)	24
SatI	GCNGC	9 cut(s)	491, 554, 1087, 1770, 2378, 2580, 3105, 3156, 3294
Sau3AI	GATC	7 cut(s)	531, 668, 896, 1327, 2688, 2884, 3304
Sau96I	GGNCC	6 cut(s)	259, 610, 1126, 2021, 2984, 3275
ScaI	AGTACT	4 cut(s)	44, 251, 1606, 1929
SchI	GAGTC	6 cut(s)	994, 1027, 1213, 2794, 3029, 3186
ScrFI	CCNGG	4 cut(s)	427, 1575, 1682, 2720
SduI	GDGCHC	4 cut(s)	24, 640, 742, 1254
SfcI	CTRYAG	7 cut(s)	1151, 1503, 1600, 2100, 2577, 3147, 3291
SinI	GGWCC	4 cut(s)	610, 1126, 2021, 2984
SmiMI	CAYNNNNRTG	3 cut(s)	276, 618, 1314
SmlI	CTYRAG	2 cut(s)	514, 2954
SmoI	CTYRAG	2 cut(s)	514, 2954
SsiI	CCGC	6 cut(s)	167, 1838, 1960, 2378, 3155, 3185
SspI	AATATT	1 cut(s)	1057
SspMI	CTAG	5 cut(s)	282, 576, 1295, 3048, 3279
SstI	GAGCTC	1 cut(s)	24
StyD4I	CCNGG	4 cut(s)	425, 1573, 1680, 2718
StyI	CCWWGG	1 cut(s)	575
TaiI	ACGT	6 cut(s)	8, 739, 885, 1257, 3119, 3245
TaqI	TCGA	6 cut(s)	291, 323, 1116, 1951, 2128, 2433
TatI	WGTACW	6 cut(s)	42, 249, 1604, 1927, 2682, 2905
TauI	GCSGC	2 cut(s)	2380, 3158
TseFI	GTSAC	1 cut(s)	2536
TseI	GCWGC	7 cut(s)	490, 553, 1086, 1769, 2579, 3104, 3293
Tsp45I	GTSAC	1 cut(s)	2536
TspGWI	ACGGA	2 cut(s)	470, 1300
Tth111I	GACNNNGTC	1 cut(s)	2675
Van91I	CCANNNNNTGG	1 cut(s)	2605
Vha464I	CTTAAG	1 cut(s)	2954
VneI	GTGCAC	1 cut(s)	1250
VpaK11BI	GGWCC	4 cut(s)	610, 1126, 2021, 2984
XapI	RAATTY	5 cut(s)	376, 1111, 1793, 2143, 2517
XceI	RCATGY	1 cut(s)	1140
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1226
XmaJI	CCTAGG	1 cut(s)	575
XmiI	GTMKAC	1 cut(s)	2099
XmnI	GAANNNNTTC	3 cut(s)	224, 317, 1760
XspI	CTAG	5 cut(s)	282, 576, 1295, 3048, 3279
ZrmI	AGTACT	4 cut(s)	44, 251, 1606, 1929
Zsp2I	ATGCAT	3 cut(s)	871, 1138, 1364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.