Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010571

Physical Location & Seq

Genomic Coordinates Reverse (-)

8612389 .. 8613421

Gene Structure 1033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G107600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 606 bp

ATGGCTCCAGCAGCTGCCGGAGAAAGGTCTTTAAAAGAGACACCCACATGGGCTGTTGCCATTGCCTGTGCAGTTTTCATACTTATTTCTATAATTATAGAACAAGCAATTCATGCTCTTGGGAAGTGGTTCCAGAAACGCAATAAGAAAGCTATGCTTGAAGCTTTGGAGAAAATAAAAGCTGAGCTCATGCTTTTGGGATTCATATCTCTGCTACTTACGGTGGGCACAAGATATCTTCCAAAAATATGCATCCCAGAAAAGTATGGTAATACGATGCTGCCATGTGAGCTAGAGAGCAAGTATAAAGAGGACGGGGGCGGCAAGGATGATGGCAAAAACAAAGGAGGAGGAGGAGATGGCGGTGATGATAATGACAGACGAAGAAAGTTACTTGAATTTGCTGAAACCATGATATGGCGTCGAGTTTTAGCCCCTAGTGGAGGAGATTCCTTTGCTTGTTCAGAGGGTAAAGTGCCGCTGATATCTCCATCTGGGATGCACCAATTGCACATCTTCATCTTTGTGCTTGCTGTTTTTCATGTTGTGTACAGTGTCATTACCATGGCACTAGCGCAGGCCAAAGTAAGTACCATCACACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0012505 GO:0016020 GO:0030054 GO:0031347 GO:0031348 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071944 GO:0080134 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mlo

Protein Analysis

202

Amino Acids

21.94

Weight (kDa)

8.84

Isoelectric Point (pI)

48.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010571)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g25790
malus_domestica	MD06G1006000.v1.1 MD06G1006100.v1.1
prunus_persica	Prupe.3G107600_v2.0.a1 Prupe.5G007700_v2.0.a1
pyrus_communis	pycom06g00550
rosa_chinensis	RchiOBHm_Chr4g0399511 RchiOBHm_Chr4g0399531 RchiOBHm_Chr7g0216251
rosa_laevigata	RLG00000002587
rosa_multiflora	Rmu_sc0000055.1_g000018 Rmu_sc0003545.1_g000009 Rmu_sc0009152.1_g000002
rosa_roxburghii	Rroxscaffold_3G00243550
rosa_rugosa	Rorug07G0159400
rosa_samantha	Rh7AG296600 Rh7BG288800 Rh7BG288900 Rh7CG317000 Rh7DG299300
rosa_wichuraiana	Rw7G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	417
AciI	CCGC	3 cut(s)	321, 363, 479
AcsI	RAATTY	1 cut(s)	398
AcyI	GRCGYC	1 cut(s)	421
AdeI	CACNNNGTG	1 cut(s)	603
AfaI	GTAC	2 cut(s)	551, 592
AfiI	CCNNNNNNNGG	3 cut(s)	24, 417, 443
AgsI	TTSAA	2 cut(s)	161, 398
AluBI	AGCT	6 cut(s)	14, 152, 164, 182, 187, 292
AluI	AGCT	6 cut(s)	14, 152, 164, 182, 187, 292
Alw21I	GWGCWC	1 cut(s)	189
Alw26I	GTCTC	1 cut(s)	32
AlwNI	CAGNNNCTG	1 cut(s)	14
AoxI	GGCC	1 cut(s)	579
ApeKI	GCWGC	3 cut(s)	11, 14, 280
ApoI	RAATTY	1 cut(s)	398
Asp700I	GAANNNNTTC	1 cut(s)	128
AspLEI	GCGC	1 cut(s)	577
AsuHPI	GGTGA	1 cut(s)	377
BaeGI	GKGCMC	1 cut(s)	230
BanII	GRGCYC	1 cut(s)	189
Bbv12I	GWGCWC	1 cut(s)	189
BbvI	GCAGC	2 cut(s)	23, 267
BccI	CCATC	4 cut(s)	326, 353, 499, 602
BcoDI	GTCTC	1 cut(s)	32
BfaI	CTAG	3 cut(s)	293, 438, 572
BisI	GCNGC	5 cut(s)	12, 15, 281, 322, 479
BlpI	GCTNAGC	1 cut(s)	183
BlsI	GCNGC	5 cut(s)	13, 16, 282, 323, 480
BmiI	GGNNCC	2 cut(s)	6, 131
BmsI	GCATC	3 cut(s)	261, 267, 489
Bpu1102I	GCTNAGC	1 cut(s)	183
BsaBI	GATNNNNATC	1 cut(s)	205
BsaHI	GRCGYC	1 cut(s)	421
BsaJI	CCNNGG	1 cut(s)	564
Bsc4I	CCNNNNNNNGG	3 cut(s)	24, 417, 443
Bse3DI	GCAATG	1 cut(s)	60
Bse8I	GATNNNNATC	1 cut(s)	205
BseDI	CCNNGG	1 cut(s)	564
BseGI	GGATG	3 cut(s)	252, 334, 504
BseJI	GATNNNNATC	1 cut(s)	205
BseLI	CCNNNNNNNGG	3 cut(s)	24, 417, 443
BseMI	GCAATG	1 cut(s)	60
BseMII	CTCAG	1 cut(s)	174
BseRI	GAGGAG	4 cut(s)	363, 366, 369, 459
BseSI	GKGCMC	1 cut(s)	230
BseXI	GCAGC	2 cut(s)	23, 267
BsgI	GTGCAG	1 cut(s)	90
BshFI	GGCC	1 cut(s)	581
BsiHKAI	GWGCWC	1 cut(s)	189
BsiSI	CCGG	1 cut(s)	18
BslI	CCNNNNNNNGG	3 cut(s)	24, 417, 443
BsmAI	GTCTC	1 cut(s)	32
BsnI	GGCC	1 cut(s)	581
Bsp1286I	GDGCHC	2 cut(s)	189, 230
Bsp1407I	TGTACA	1 cut(s)	549
Bsp1720I	GCTNAGC	1 cut(s)	183
Bsp19I	CCATGG	1 cut(s)	564
BspACI	CCGC	3 cut(s)	321, 363, 479
BspANI	GGCC	1 cut(s)	581
BspCNI	CTCAG	1 cut(s)	175
BspLI	GGNNCC	2 cut(s)	6, 131
BsrDI	GCAATG	1 cut(s)	60
BsrGI	TGTACA	1 cut(s)	549
BssECI	CCNNGG	1 cut(s)	564
BssNI	GRCGYC	1 cut(s)	421
BssT1I	CCWWGG	1 cut(s)	564
Bst4CI	ACNGT	3 cut(s)	223, 554, 603
BstACI	GRCGYC	1 cut(s)	421
BstAPI	GCANNNNNTGC	2 cut(s)	113, 508
BstAUI	TGTACA	1 cut(s)	549
BstC8I	GCNNGC	2 cut(s)	531, 579
BstDEI	CTNAG	1 cut(s)	183
BstDSI	CCRYGG	1 cut(s)	564
BstENI	CCTNNNNNAGG	1 cut(s)	441
BstF5I	GGATG	3 cut(s)	252, 334, 504
BstHHI	GCGC	1 cut(s)	577
BstMAI	GTCTC	1 cut(s)	32
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 113, 289, 508
BstSLI	GKGCMC	1 cut(s)	230
BstV1I	GCAGC	2 cut(s)	23, 267
BsuRI	GGCC	1 cut(s)	581
BtgI	CCRYGG	1 cut(s)	564
BtsCI	GGATG	3 cut(s)	252, 334, 504
BtsIMutI	CAGTG	2 cut(s)	559, 599
Cac8I	GCNNGC	2 cut(s)	531, 579
CaiI	CAGNNNCTG	1 cut(s)	14
CfoI	GCGC	1 cut(s)	577
CseI	GACGC	1 cut(s)	410
Csp6I	GTAC	2 cut(s)	550, 591
CviAII	CATG	7 cut(s)	48, 113, 190, 285, 412, 542, 565
CviQI	GTAC	2 cut(s)	550, 591
DdeI	CTNAG	1 cut(s)	183
DraI	TTTAAA	1 cut(s)	33
DraIII	CACNNNGTG	1 cut(s)	603
Ecl136II	GAGCTC	1 cut(s)	187
Eco130I	CCWWGG	1 cut(s)	564
Eco24I	GRGCYC	1 cut(s)	189
Eco32I	GATATC	2 cut(s)	236, 486
Eco53kI	GAGCTC	1 cut(s)	187
EcoICRI	GAGCTC	1 cut(s)	187
EcoNI	CCTNNNNNAGG	1 cut(s)	441
EcoRV	GATATC	2 cut(s)	236, 486
EcoT14I	CCWWGG	1 cut(s)	564
EcoT22I	ATGCAT	1 cut(s)	254
EcoT38I	GRGCYC	1 cut(s)	189
ErhI	CCWWGG	1 cut(s)	564
FaeI	CATG	7 cut(s)	51, 116, 193, 288, 415, 545, 568
FalI	AAGNNNNNCTT	2 cut(s)	141, 173
FatI	CATG	7 cut(s)	47, 112, 189, 284, 411, 541, 564
Fnu4HI	GCNGC	5 cut(s)	12, 15, 281, 322, 479
FokI	GGATG	3 cut(s)	239, 341, 511
FriOI	GRGCYC	1 cut(s)	189
Fsp4HI	GCNGC	5 cut(s)	12, 15, 281, 322, 479
FspBI	CTAG	3 cut(s)	293, 438, 572
GlaI	GCGC	1 cut(s)	576
GluI	GCNGC	5 cut(s)	12, 15, 281, 322, 479
HaeIII	GGCC	1 cut(s)	581
HapII	CCGG	1 cut(s)	18
HgaI	GACGC	1 cut(s)	410
HhaI	GCGC	1 cut(s)	577
Hin1I	GRCGYC	1 cut(s)	421
Hin1II	CATG	7 cut(s)	51, 116, 193, 288, 415, 545, 568
Hin6I	GCGC	1 cut(s)	575
HinP1I	GCGC	1 cut(s)	575
HindIII	AAGCTT	1 cut(s)	162
HinfI	GANTC	2 cut(s)	201, 449
HpaII	CCGG	1 cut(s)	18
HphI	GGTGA	1 cut(s)	377
Hpy166II	GTNNAC	1 cut(s)	550
Hpy188I	TCNGA	1 cut(s)	466
Hpy188III	TCNNGA	1 cut(s)	133
Hpy8I	GTNNAC	1 cut(s)	550
Hpy99I	CGWCG	1 cut(s)	426
HpyCH4III	ACNGT	3 cut(s)	223, 554, 603
HpyCH4V	TGCA	4 cut(s)	71, 252, 502, 511
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 113, 289, 508
HpyF3I	CTNAG	1 cut(s)	183
Hsp92I	GRCGYC	1 cut(s)	421
Hsp92II	CATG	7 cut(s)	51, 116, 193, 288, 415, 545, 568
HspAI	GCGC	1 cut(s)	575
LmnI	GCTCC	1 cut(s)	10
LpnPI	CCDG	7 cut(s)	21, 31, 79, 146, 270, 480, 563
Lsp1109I	GCAGC	2 cut(s)	23, 267
LweI	GCATC	3 cut(s)	261, 267, 489
MaeI	CTAG	3 cut(s)	293, 438, 572
MaeIII	GTNAC	1 cut(s)	390
MboII	GAAGA	3 cut(s)	230, 396, 508
MfeI	CAATTG	1 cut(s)	506
MhlI	GDGCHC	2 cut(s)	189, 230
MluCI	AATT	4 cut(s)	93, 108, 398, 506
MnlI	CCTC	6 cut(s)	304, 341, 344, 347, 437, 460
Mph1103I	ATGCAT	1 cut(s)	254
MroXI	GAANNNNTTC	1 cut(s)	128
MseI	TTAA	1 cut(s)	32
MslI	CAYNNNNRTG	3 cut(s)	46, 524, 563
MspA1I	CMGCKG	2 cut(s)	14, 481
MspI	CCGG	1 cut(s)	18
MunI	CAATTG	1 cut(s)	506
MwoI	GCNNNNNNNGC	4 cut(s)	11, 113, 289, 508
NcoI	CCATGG	1 cut(s)	564
NlaIII	CATG	7 cut(s)	51, 116, 193, 288, 415, 545, 568
NlaIV	GGNNCC	2 cut(s)	6, 131
NsiI	ATGCAT	1 cut(s)	254
PdmI	GAANNNNTTC	1 cut(s)	128
PfeI	GAWTC	2 cut(s)	201, 449
PflMI	CCANNNNNTGG	1 cut(s)	417
PkrI	GCNGC	5 cut(s)	13, 16, 282, 323, 480
Psp124BI	GAGCTC	1 cut(s)	189
PspN4I	GGNNCC	2 cut(s)	6, 131
PstNI	CAGNNNCTG	1 cut(s)	14
PvuII	CAGCTG	1 cut(s)	14
RsaI	GTAC	2 cut(s)	551, 592
RsaNI	GTAC	2 cut(s)	550, 591
RseI	CAYNNNNRTG	3 cut(s)	46, 524, 563
SacI	GAGCTC	1 cut(s)	189
SaqAI	TTAA	1 cut(s)	32
SatI	GCNGC	5 cut(s)	12, 15, 281, 322, 479
SduI	GDGCHC	2 cut(s)	189, 230
SetI	ASST	7 cut(s)	16, 29, 154, 166, 184, 189, 294
SfaNI	GCATC	3 cut(s)	261, 267, 489
SmiMI	CAYNNNNRTG	3 cut(s)	46, 524, 563
Sse9I	AATT	4 cut(s)	93, 108, 398, 506
SsiI	CCGC	3 cut(s)	321, 363, 479
SspMI	CTAG	3 cut(s)	293, 438, 572
SstI	GAGCTC	1 cut(s)	189
StyI	CCWWGG	1 cut(s)	564
TaaI	ACNGT	3 cut(s)	223, 554, 603
TaqI	TCGA	1 cut(s)	424
TasI	AATT	4 cut(s)	93, 108, 398, 506
TatI	WGTACW	1 cut(s)	549
TauI	GCSGC	2 cut(s)	324, 481
TfiI	GAWTC	2 cut(s)	201, 449
Tru1I	TTAA	1 cut(s)	32
Tru9I	TTAA	1 cut(s)	32
TscAI	CASTG	2 cut(s)	559, 606
TseI	GCWGC	3 cut(s)	11, 14, 280
TspDTI	ATGAA	5 cut(s)	67, 101, 193, 508, 530
TspRI	CASTG	2 cut(s)	559, 606
Van91I	CCANNNNNTGG	1 cut(s)	417
XagI	CCTNNNNNAGG	1 cut(s)	441
XapI	RAATTY	1 cut(s)	398
XmnI	GAANNNNTTC	1 cut(s)	128
XspI	CTAG	3 cut(s)	293, 438, 572
Zsp2I	ATGCAT	1 cut(s)	254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.