Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010864

Physical Location & Seq

Genomic Coordinates Forward (+)

15840198 .. 15844639

Gene Structure 4442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G144900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 819 bp

ATGAACGGCACGTACCTGAACCCGTTCTTGGAGGAGACGGCGTTTTACAACCGCATTGTGCTCGGCAGCCTCGTGCCTAATGGACTGTGGGCCCCACTCCCCCACTTCTTCCAGACATGGCTGCGCAACTACCTCGGCGGAACCTTGCTCTATGTCGTCTCCGGCGTCTTATGGTGCTTCTACATATACTACTTGAAACGCAGCGTTTATATCCCAAAAGATGCCATTCCCTCTAATAAAGCCATGCTTTTGCAAATATATGTTGCCATGAAGGCCATGCCTTGGTACAGTGCTCTTCCAACCATTTCTGAGTACATGGTTGAAAATGGCTGGGCAAGGTGCTTCTCAAGAATAAGTGATGTCAGTTGGCTTGCATACCTGATGTATTTAGCAATTTATCTTATATTCGTGGAGTTCGGAATTTATTGGATGCATAGAGAGTTACATGACATAAAACCTCTGTATAAATATCTTCATGCTACACACCACATCTACAACAAGCAGAATACCCTCTCTCCATTTGCTGGTTTGGCTTTTCACCCAATTGATGGGATACTGCAGGCAGTTCCACATGTTATAGCTCTGTTTGTTGTGCCAATGCATTTTACAACCCACATAGCGCTCCTATTTATCGAGGCCATATGGACAGCAAACATTCACGATTGCATACATGCCAAAATATGGCCTGTCATGGGTGCTGGTTACCACACCATACATCATACAACTTACCGCCATAATTATGGCCATTATACAATATGGATGGATTGGATGTTTGGAACGCTTCGTGATCCTATTGACGACGAATTAAAGGTCTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000248 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016705 GO:0016717 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0070704 GO:0071704 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 ko01130 map00100 map01100 map01110 map01130

Pfam Domains

Protein Families

FA_hydroxylase

Protein Analysis

273

Amino Acids

31.91

Weight (kDa)

7.3

Isoelectric Point (pI)

47.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02580 AT3G02590 AT3G02590
fragaria_vesca	FvH4_2g26170
malus_domestica	MD09G1254800.v1.1 MD17G1247400.v1.1
prunus_persica	Prupe.3G144900_v2.0.a1
pyrus_communis	pycom09g17070 pycom17g24880
rosa_chinensis	RchiOBHm_Chr6g0294591
rosa_laevigata	RLG00000011856
rosa_multiflora	Rmu_sc0006264.1_g000012 Rmu_sc0007845.1_g000002
rosa_roxburghii	Rroxscaffold_7G00173180
rosa_rugosa	Rorug06G0246200
rosa_samantha	Rh6AG358500 Rh6BG365700 Rh6CG372300 Rh6DG359100
rosa_wichuraiana	Rw6G031280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	125
AccB7I	CCANNNNNTGG	4 cut(s)	282, 524, 548, 681
AciI	CCGC	3 cut(s)	52, 138, 730
AclWI	GGATC	1 cut(s)	782
AcoI	YGGCCR	1 cut(s)	742
AcsI	RAATTY	1 cut(s)	420
AcyI	GRCGYC	1 cut(s)	165
AfaI	GTAC	3 cut(s)	14, 287, 314
AfeI	AGCGCT	1 cut(s)	621
AfiI	CCNNNNNNNGG	6 cut(s)	28, 282, 524, 548, 681, 692
AflIII	ACRYGT	1 cut(s)	571
AgsI	TTSAA	2 cut(s)	196, 323
AjuI	GAANNNNNNNTTGG	2 cut(s)	11, 43
AluBI	AGCT	1 cut(s)	581
AluI	AGCT	1 cut(s)	581
Alw21I	GWGCWC	2 cut(s)	63, 295
Alw26I	GTCTC	2 cut(s)	29, 163
AlwI	GGATC	1 cut(s)	782
Aor51HI	AGCGCT	1 cut(s)	621
AoxI	GGCC	5 cut(s)	90, 273, 636, 683, 742
ApaI	GGGCCC	1 cut(s)	94
ApeKI	GCWGC	3 cut(s)	66, 121, 201
ApoI	RAATTY	1 cut(s)	420
ArsI	GACNNNNNNTTYG	1 cut(s)	795
Asp700I	GAANNNNTTC	1 cut(s)	23
AspLEI	GCGC	2 cut(s)	126, 622
AspS9I	GGNCC	2 cut(s)	90, 91
AsuHPI	GGTGA	1 cut(s)	530
BaeGI	GKGCMC	1 cut(s)	94
BalI	TGGCCA	1 cut(s)	744
BanII	GRGCYC	1 cut(s)	94
BauI	CACGAG	1 cut(s)	71
Bbv12I	GWGCWC	2 cut(s)	63, 295
BbvI	GCAGC	3 cut(s)	78, 108, 213
BccI	CCATC	2 cut(s)	542, 754
BceAI	ACGGC	2 cut(s)	22, 54
BcgI	CGANNNNNNTGC	4 cut(s)	43, 77, 115, 149
BciVI	GTATCC	1 cut(s)	546
BcoDI	GTCTC	2 cut(s)	29, 163
BfmI	CTRYAG	1 cut(s)	557
BfoI	RGCGCY	1 cut(s)	623
BfuI	GTATCC	1 cut(s)	546
BglI	GCCNNNNNGGC	1 cut(s)	272
BisI	GCNGC	3 cut(s)	67, 122, 202
BlsI	GCNGC	3 cut(s)	68, 123, 203
BmgT120I	GGNCC	2 cut(s)	90, 91
BmiI	GGNNCC	3 cut(s)	92, 93, 142
BmsI	GCATC	2 cut(s)	211, 420
BpuEI	CTTGAG	1 cut(s)	331
BsaAI	YACGTR	1 cut(s)	12
BsaHI	GRCGYC	1 cut(s)	165
BsaJI	CCNNGG	2 cut(s)	133, 281
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 499, 529
Bsc4I	CCNNNNNNNGG	6 cut(s)	28, 282, 524, 548, 681, 692
BseDI	CCNNGG	2 cut(s)	133, 281
BseGI	GGATG	3 cut(s)	435, 765, 774
BseLI	CCNNNNNNNGG	6 cut(s)	28, 282, 524, 548, 681, 692
BseMII	CTCAG	1 cut(s)	300
BseRI	GAGGAG	1 cut(s)	47
BseSI	GKGCMC	1 cut(s)	94
BseXI	GCAGC	3 cut(s)	78, 108, 213
BseYI	CCCAGC	1 cut(s)	330
BshFI	GGCC	5 cut(s)	92, 275, 638, 685, 744
BsiHKAI	GWGCWC	2 cut(s)	63, 295
BsiSI	CCGG	1 cut(s)	162
BslI	CCNNNNNNNGG	6 cut(s)	28, 282, 524, 548, 681, 692
BsmAI	GTCTC	2 cut(s)	29, 163
BsmBI	CGTCTC	2 cut(s)	29, 163
BsnI	GGCC	5 cut(s)	92, 275, 638, 685, 744
Bsp120I	GGGCCC	1 cut(s)	90
Bsp1286I	GDGCHC	3 cut(s)	63, 94, 295
Bsp143I	GATC	1 cut(s)	787
BspACI	CCGC	3 cut(s)	52, 138, 730
BspANI	GGCC	5 cut(s)	92, 275, 638, 685, 744
BspCNI	CTCAG	1 cut(s)	301
BspLI	GGNNCC	3 cut(s)	92, 93, 142
BspMAI	CTGCAG	1 cut(s)	561
BspPI	GGATC	1 cut(s)	782
BspQI	GCTCTTC	1 cut(s)	300
BssECI	CCNNGG	2 cut(s)	133, 281
BssMI	GATC	1 cut(s)	787
BssNI	GRCGYC	1 cut(s)	165
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	1 cut(s)	281
Bst2BI	CACGAG	1 cut(s)	71
Bst4CI	ACNGT	2 cut(s)	87, 290
Bst6I	CTCTTC	1 cut(s)	300
BstACI	GRCGYC	1 cut(s)	165
BstBAI	YACGTR	1 cut(s)	12
BstC8I	GCNNGC	2 cut(s)	372, 561
BstDEI	CTNAG	1 cut(s)	309
BstEII	GGTNACC	1 cut(s)	701
BstF5I	GGATG	3 cut(s)	435, 765, 774
BstH2I	RGCGCY	1 cut(s)	623
BstHHI	GCGC	2 cut(s)	126, 622
BstKTI	GATC	1 cut(s)	790
BstMAI	GTCTC	2 cut(s)	29, 163
BstMBI	GATC	1 cut(s)	787
BstMWI	GCNNNNNNNGC	2 cut(s)	272, 530
BstNSI	RCATGY	2 cut(s)	575, 674
BstPI	GGTNACC	1 cut(s)	701
BstSFI	CTRYAG	1 cut(s)	557
BstSLI	GKGCMC	1 cut(s)	94
BstV1I	GCAGC	3 cut(s)	78, 108, 213
BstXI	CCANNNNNNTGG	1 cut(s)	740
BsuI	GTATCC	1 cut(s)	546
BsuRI	GGCC	5 cut(s)	92, 275, 638, 685, 744
BtsCI	GGATG	3 cut(s)	435, 765, 774
BtsIMutI	CAGTG	1 cut(s)	295
Cac8I	GCNNGC	2 cut(s)	372, 561
CfoI	GCGC	2 cut(s)	126, 622
Cfr13I	GGNCC	2 cut(s)	90, 91
CseI	GACGC	1 cut(s)	154
Csp6I	GTAC	3 cut(s)	13, 286, 313
CviQI	GTAC	3 cut(s)	13, 286, 313
DdeI	CTNAG	1 cut(s)	309
DpnI	GATC	1 cut(s)	789
DpnII	GATC	1 cut(s)	787
EaeI	YGGCCR	1 cut(s)	742
Eam1104I	CTCTTC	1 cut(s)	300
EarI	CTCTTC	1 cut(s)	300
EciI	GGCGGA	1 cut(s)	153
Eco130I	CCWWGG	1 cut(s)	281
Eco24I	GRGCYC	1 cut(s)	94
Eco47III	AGCGCT	1 cut(s)	621
Eco91I	GGTNACC	1 cut(s)	701
EcoO109I	RGGNCCY	1 cut(s)	91
EcoO65I	GGTNACC	1 cut(s)	701
EcoT14I	CCWWGG	1 cut(s)	281
EcoT22I	ATGCAT	2 cut(s)	435, 603
EcoT38I	GRGCYC	1 cut(s)	94
ErhI	CCWWGG	1 cut(s)	281
Esp3I	CGTCTC	2 cut(s)	29, 163
FalI	AAGNNNNNCTT	2 cut(s)	231, 263
FauNDI	CATATG	1 cut(s)	641
Fnu4HI	GCNGC	3 cut(s)	67, 122, 202
FokI	GGATG	3 cut(s)	442, 772, 781
FriOI	GRGCYC	1 cut(s)	94
Fsp4HI	GCNGC	3 cut(s)	67, 122, 202
FspI	TGCGCA	1 cut(s)	125
GlaI	GCGC	2 cut(s)	125, 621
GluI	GCNGC	3 cut(s)	67, 122, 202
GsaI	CCCAGC	1 cut(s)	334
HaeII	RGCGCY	1 cut(s)	623
HaeIII	GGCC	5 cut(s)	92, 275, 638, 685, 744
HapII	CCGG	1 cut(s)	162
HgaI	GACGC	1 cut(s)	154
HhaI	GCGC	2 cut(s)	126, 622
Hin1I	GRCGYC	1 cut(s)	165
Hin6I	GCGC	2 cut(s)	124, 620
HinP1I	GCGC	2 cut(s)	124, 620
HpaII	CCGG	1 cut(s)	162
HphI	GGTGA	1 cut(s)	530
Hpy188I	TCNGA	2 cut(s)	310, 419
Hpy188III	TCNNGA	4 cut(s)	112, 348, 659, 785
Hpy99I	CGWCG	1 cut(s)	803
HpyAV	CCTTC	1 cut(s)	265
HpyCH4III	ACNGT	2 cut(s)	87, 290
HpyCH4IV	ACGT	1 cut(s)	11
HpyCH4V	TGCA	6 cut(s)	253, 374, 433, 559, 601, 666
HpyF10VI	GCNNNNNNNGC	2 cut(s)	272, 530
HpyF3I	CTNAG	1 cut(s)	309
HpySE526I	ACGT	1 cut(s)	11
Hsp92I	GRCGYC	1 cut(s)	165
HspAI	GCGC	2 cut(s)	124, 620
Kzo9I	GATC	1 cut(s)	787
LguI	GCTCTTC	1 cut(s)	300
LmnI	GCTCC	1 cut(s)	627
LpnPI	CCDG	9 cut(s)	29, 125, 175, 316, 392, 510, 545, 684, 699
Lsp1109I	GCAGC	3 cut(s)	78, 108, 213
LweI	GCATC	2 cut(s)	211, 420
MaeII	ACGT	1 cut(s)	11
MaeIII	GTNAC	2 cut(s)	441, 701
MalI	GATC	1 cut(s)	789
MboI	GATC	1 cut(s)	787
MboII	GAAGA	3 cut(s)	100, 287, 464
MfeI	CAATTG	1 cut(s)	543
MhlI	GDGCHC	3 cut(s)	63, 94, 295
MlsI	TGGCCA	1 cut(s)	744
MluCI	AATT	5 cut(s)	393, 420, 543, 736, 803
MluNI	TGGCCA	1 cut(s)	744
MmeI	TCCRAC	1 cut(s)	323
MnlI	CCTC	7 cut(s)	25, 80, 143, 241, 468, 521, 628
Mox20I	TGGCCA	1 cut(s)	744
Mph1103I	ATGCAT	2 cut(s)	435, 603
MroXI	GAANNNNTTC	1 cut(s)	23
MscI	TGGCCA	1 cut(s)	744
MseI	TTAA	1 cut(s)	806
MslI	CAYNNNNRTG	1 cut(s)	738
Msp20I	TGGCCA	1 cut(s)	744
MspI	CCGG	1 cut(s)	162
MunI	CAATTG	1 cut(s)	543
MwoI	GCNNNNNNNGC	2 cut(s)	272, 530
NdeI	CATATG	1 cut(s)	641
NdeII	GATC	1 cut(s)	787
NlaIV	GGNNCC	3 cut(s)	92, 93, 142
NmeAIII	GCCGAG	2 cut(s)	42, 114
NsbI	TGCGCA	1 cut(s)	125
NsiI	ATGCAT	2 cut(s)	435, 603
NspI	RCATGY	2 cut(s)	575, 674
PciI	ACATGT	1 cut(s)	571
PciSI	GCTCTTC	1 cut(s)	300
PcsI	WCGNNNNNNNCGW	2 cut(s)	69, 162
PdmI	GAANNNNTTC	1 cut(s)	23
PflMI	CCANNNNNTGG	4 cut(s)	282, 524, 548, 681
PkrI	GCNGC	3 cut(s)	68, 123, 203
Ppu21I	YACGTR	1 cut(s)	12
PscI	ACATGT	1 cut(s)	571
PspEI	GGTNACC	1 cut(s)	701
PspFI	CCCAGC	1 cut(s)	330
PspN4I	GGNNCC	3 cut(s)	92, 93, 142
PspOMI	GGGCCC	1 cut(s)	90
PspPI	GGNCC	2 cut(s)	90, 91
PsrI	GAACNNNNNNTAC	1 cut(s)	28
PstI	CTGCAG	1 cut(s)	561
RsaI	GTAC	3 cut(s)	14, 287, 314
RsaNI	GTAC	3 cut(s)	13, 286, 313
RseI	CAYNNNNRTG	1 cut(s)	738
SapI	GCTCTTC	1 cut(s)	300
SaqAI	TTAA	1 cut(s)	806
SatI	GCNGC	3 cut(s)	67, 122, 202
Sau3AI	GATC	1 cut(s)	787
Sau96I	GGNCC	2 cut(s)	90, 91
SduI	GDGCHC	3 cut(s)	63, 94, 295
SetI	ASST	9 cut(s)	14, 18, 135, 146, 341, 381, 460, 583, 813
SfaNI	GCATC	2 cut(s)	211, 420
SfcI	CTRYAG	1 cut(s)	557
SmiMI	CAYNNNNRTG	1 cut(s)	738
SmlI	CTYRAG	1 cut(s)	346
SmoI	CTYRAG	1 cut(s)	346
Sse9I	AATT	5 cut(s)	393, 420, 543, 736, 803
SsiI	CCGC	3 cut(s)	52, 138, 730
StyI	CCWWGG	1 cut(s)	281
TaaI	ACNGT	2 cut(s)	87, 290
TaiI	ACGT	1 cut(s)	14
TaqI	TCGA	1 cut(s)	633
TasI	AATT	5 cut(s)	393, 420, 543, 736, 803
TatI	WGTACW	1 cut(s)	312
Tru1I	TTAA	1 cut(s)	806
Tru9I	TTAA	1 cut(s)	806
TscAI	CASTG	1 cut(s)	295
TseI	GCWGC	3 cut(s)	66, 121, 201
TspDTI	ATGAA	3 cut(s)	17, 284, 464
TspRI	CASTG	1 cut(s)	295
Van91I	CCANNNNNTGG	4 cut(s)	282, 524, 548, 681
XapI	RAATTY	1 cut(s)	420
XceI	RCATGY	2 cut(s)	575, 674
XmnI	GAANNNNTTC	1 cut(s)	23
Zsp2I	ATGCAT	2 cut(s)	435, 603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.