Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0005431

Physical Location & Seq

Genomic Coordinates Forward (+)

17988821 .. 17997286

Gene Structure 8466 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G161000.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGAGAAGCAAAAACGAGACTAAGCGTTCTAAAGAATCGTCATCAGGAACTCTTGCCGACGTATCACTGGAGGCTGTGGGCAAACTTCTGAGGCGTTGCAATAAAACTGGGAGAAAAAAATTTGAGAATAGTCTGCGTCAATGTGATTCAATTGGAAAGTCAGAGAGTGGGGCAAAGAGAGATGAAGAAGATGTGGATTCAAGAGTCAGAGGGAATAGTTTGGAAACTGCAGGTGGAAGTAAAGATGCAAAGAAAAAGGTCTCTTGGGAAGAGAAAGTTGATCGGGAAAGCTTTCAGTGCAGTTTTACGGACACTAAGGAAGAACTGGATGACGCAGATTGGGAAGATGGCCCAGTTCCCATTTTAAATTCCGTGGGCGATCATGAAGTGACTATTGAATTAAATGAGACACCAGATTCTACAAGAAGGAAACGTATTCGTCGGGCTTCTGCCGAAGATAAGGAATTGGCTGAGCTTGTTCATAAGGTTCATTTACTTTGTTTACTCGCACGGGGAAGATTGATTGATAGAGCTTGTGATGACGCTCTTATTCAGGCTACTTTACTTTCTCTTCTTCCAGTACACTTGCTGCATATATCAAAGGTTGCAAAACCTACTGTAAAGGATTTGCGTCCCCTAGTCTTTTGGTTTCAAAATAACTTCCGTGTTAGAAGTACAAGTGTGAGCAAATCATTTTATTCGGCTCTGACTTTTGCTCTTGAAACCCATGAAGGGACTCAAGAAGAGATTGCTGCGTTGTCTGTGGCACTCTTTAGAGCTTTAAATCTGACAACCCGGTTCGTGTCCATTTTGGATGTTGCCTCCTTAAAACCAGATGCTGACAAGACTGAATATTCTAGTGAAGATGCAAGCAGATCAAGTAGGGGAATATTCAGTACTTCAACTCCAATGGTGGCTAGAAAACAGGATGTCTCTGTGTCTCTTGGTAAATCACCTTCATGTAATGAGAGAGACAATGTCTGTGGAACTTCTCAGATGGGTTCATGCAGAAGTAAGGACTGCCACCCAACAAGTAACAACACTCCGCCCAAAGGTTCTTGTAATGCTTATGAGGTGAATGATAGAATGCTAGATACATTAGCTTGTGGGGCACATCATGATATCTCAGAAGCAGTCCTTAATAAGAAATCACAGGGATTAAAGAGGAGAGGGGATCTTGAGTTTGAAATGCAGTTGAAAATGGCACTTTCTGCTACAGCAGTGCCAACTGCAGATAGAGAAATGGGTTCGGGTGTGAATTACTTGAACGGTAATGAAAATTTCTCTTACTCAAAAAGAATGAAAAGAATTGTTAGCGAAGAATCACGAAACTCGTCCCAGAGTATCTCTACTGCAGTTGGATCGAGAAAAGTAGGTTCTCCTTTGTATTGGGCAGAAGTATACTGCAAGGGGGAAAACTTGACTGGAAAGTGGGTGCATATTGATGCTATTAATGCAATTATTGATGGAGAACAGAATGTTGAAGCTCTAGCTGCAGCATGCAAAACGTCTTTGCGATATGCTGTTGCTTTTGCTGGGAATGGGGCTAAAGATGTGACTCGCAGGTACTGTCTGAAGTGGTATCAGATAGCATCCCAACGAGTCAATTCAATATGGTGGGATGCGGTATTGGCACCGTTGAGAGATTTCGAGGTGACAGCAACAAGCGGCAGTGTCCATTTGGAGAAAGAACACACTGGATCCTCATCGGGACATGAACAAGCTAAATCCTTAAACATCTCTGACAGAGCGGTTATTGCTACTAGAAACTCCCTCGAGGATATGGAGTTGGAAACTAAGGCATTAACTGAGCCTCTTCCAACTAATCAGCAGGCCTATAAAAACCATCAACTATATGCTATTGAAAAATGGCTTAACAAGGATCAGGTACTTCATCCGAAGGGCCCCATTGTGGGTTTTTGTTCAGGTCATCCAGTTTACCCTAGGACATGTGTGCAAACACTAAAGACAAGAGAAAGATGGCTACGGGAGGGGCTGCAAGTTAAAATCAATGAGCATCCTGTGAAGGAGTTGAAACGTTCTTCAAAAGTCCACAAAGTACAGGACCCTGAATCTGATAATTATGTTGGGGGAAATTCAAAACGAACTATTGAACTTTATGGCAAGTGGCAACTTGAACCCTTGGATCTGCCTCATGCTGTTAATGGGATAGTGCCAAAGAATGATCACGGTAATGTGGAAGTATGGTCTGAGAAGTGCCTTCCGCCAGGGACTATGCACTTGAGGTTGCCAAGGGTGTTTTATGTTGCCAAGAGGCTGGAAATTGATTATGCTCCAGCCATGGTTGGTTTCGAATTCAAAAATGGTCAATCATATCCTGTCTTTGATGGTATAGTAGTATGTGCTGAGTTCGGGGATGCAATAGTGGAGGCATATGCAGAGGAAGAGGAAAGAAGAGAGGCTGTAGAAAAGAAAAGAAATGAAATGCAGGCTATTTCGCGGTGGTATCAGCTTCTCTCTTCCGTTGTAACTCGGCAAAGGTTAGAAAACCTCTATGGGGATTCCTCCTCATCTGTAGCATCAGTTAGCACCAAAAGTGTGAACGGTAAGTTAGATGTACAGGTTGATGGTAGTCCGAATGATGAGCAATCTCTTGCATGCCAGCAAGATGTGCATGAAAATAGGCCGGCTGGTCCGTCAGCTGCCATGCCGGAAAACCATGAGCATGTATTCTTGACAGAAAACCAGAGTTTTGATGAGGACAACTTGGTGGTGACAAGGAGGTGTCATTGTGGATTCACGGTGCAAGTGGAAGAACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000109 GO:0000111 GO:0000217 GO:0000404 GO:0000405 GO:0000715 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003697 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005739 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006294 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007346 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010564 GO:0016020 GO:0016043 GO:0022607 GO:0030983 GO:0031974 GO:0031981 GO:0032135 GO:0032991 GO:0033554 GO:0034622 GO:0034641 GO:0034644 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070911 GO:0070914 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071824 GO:0071840 GO:0071942 GO:0071944 GO:0090304 GO:0097159 GO:0104004 GO:1901360 GO:1901363 GO:1901987 GO:1901990 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko03420 map03420

Pfam Domains

Protein Families

BHD_1 BHD_2 BHD_3 Rad4 Transglut_core

Protein Analysis

928

Amino Acids

103.41

Weight (kDa)

6.53

Isoelectric Point (pI)

49.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16630 AT5G16630 AT5G16630
fragaria_vesca	FvH4_1g28770 FvH4_1g28770 FvH4_1g28770 FvH4_1g28770
malus_domestica	MD17G1258300.v1.1
prunus_persica	Prupe.3G161000_v2.0.a1 Prupe.3G161000_v2.0.a1 Prupe.3G161000_v2.0.a1 Prupe.3G161000_v2.0.a1
pyrus_communis	pycom17g26020
rosa_chinensis	RchiOBHm_Chr3g0493161
rosa_laevigata	RLG00000022722 RLG00000022723 RLG00000022724
rosa_multiflora	Rmu_co8401441.1_g000001 Rmu_sc0003290.1_g000009 Rmu_sc0009488.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391760
rosa_rugosa	Rorug03G0259500 Rorug03G0259600 Rorug03G0259700
rosa_samantha	Rh3AG308600 Rh3BG344700 Rh3CG341900 Rh3DG344000
rosa_wichuraiana	Rw3G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	221
AbsI	CCTCGAGG	1 cut(s)	1775
Acc36I	ACCTGC	2 cut(s)	221, 1554
AccB1I	GGYRCC	1 cut(s)	1633
AccBSI	CCGCTC	1 cut(s)	1751
AccI	GTMKAC	1 cut(s)	1401
AccII	CGCG	1 cut(s)	2461
AciI	CCGC	6 cut(s)	1046, 1625, 1668, 1751, 2225, 2461
AclI	AACGTT	1 cut(s)	2038
AclWI	GGATC	6 cut(s)	1182, 1369, 1695, 1708, 1890, 2154
AcsI	RAATTY	5 cut(s)	119, 367, 1279, 2095, 2315
AcuI	CTGAAG	1 cut(s)	1595
AfaI	GTAC	7 cut(s)	582, 676, 898, 1568, 1890, 2061, 2580
AfiI	CCNNNNNNNGG	5 cut(s)	732, 1052, 1912, 1913, 2518
AflIII	ACRYGT	1 cut(s)	1949
AjnI	CCWGG	1 cut(s)	2227
Alw26I	GTCTC	6 cut(s)	11, 265, 401, 937, 945, 966
AlwI	GGATC	6 cut(s)	1182, 1369, 1695, 1708, 1890, 2154
AlwNI	CAGNNNCTG	2 cut(s)	839, 1569
Ama87I	CYCGRG	1 cut(s)	1775
AoxI	GGCC	4 cut(s)	349, 1833, 1903, 2645
ApaI	GGGCCC	1 cut(s)	1907
ApeKI	GCWGC	6 cut(s)	589, 752, 1493, 1496, 1996, 2663
ApoI	RAATTY	5 cut(s)	119, 367, 1279, 2095, 2315
AseI	ATTAAT	1 cut(s)	1452
Asp700I	GAANNNNTTC	1 cut(s)	291
AspA2I	CCTAGG	1 cut(s)	1943
AspS9I	GGNCC	5 cut(s)	350, 1903, 1904, 2065, 2654
AsuC2I	CCSGG	1 cut(s)	796
AsuHPI	GGTGA	4 cut(s)	945, 1087, 1666, 2746
AsuII	TTCGAA	1 cut(s)	2313
AvaI	CYCGRG	1 cut(s)	1775
AvaII	GGWCC	2 cut(s)	2065, 2654
AvrII	CCTAGG	1 cut(s)	1943
BaeGI	GKGCMC	2 cut(s)	1114, 1907
BamHI	GGATCC	1 cut(s)	1700
BanI	GGYRCC	1 cut(s)	1633
BanII	GRGCYC	1 cut(s)	1907
BarI	GAAGNNNNNNTAC	2 cut(s)	940, 972
BbvI	GCAGC	6 cut(s)	576, 739, 1480, 1508, 1983, 2650
BccI	CCATC	7 cut(s)	341, 991, 1460, 1854, 1974, 2342, 2582
BcgI	CGANNNNNNTGC	2 cut(s)	1344, 1378
BciT130I	CCWGG	1 cut(s)	2229
BclI	TGATCA	1 cut(s)	2185
BcnI	CCSGG	1 cut(s)	796
BcoDI	GTCTC	6 cut(s)	11, 265, 401, 937, 945, 966
BfaI	CTAG	7 cut(s)	638, 858, 918, 1091, 1490, 1764, 1944
BfmI	CTRYAG	8 cut(s)	228, 1215, 1230, 1353, 1494, 2424, 2535, 2780
BfuAI	ACCTGC	2 cut(s)	221, 1554
BisI	GCNGC	7 cut(s)	590, 753, 1494, 1497, 1669, 1997, 2664
BlnI	CCTAGG	1 cut(s)	1943
BlpI	GCTNAGC	1 cut(s)	471
BlsI	GCNGC	7 cut(s)	591, 754, 1495, 1498, 1670, 1998, 2665
BmcAI	AGTACT	1 cut(s)	898
Bme1390I	CCNGG	2 cut(s)	796, 2229
Bme18I	GGWCC	2 cut(s)	2065, 2654
BmeT110I	CYCGRG	1 cut(s)	1775
BmgT120I	GGNCC	5 cut(s)	350, 1903, 1904, 2065, 2654
BmiI	GGNNCC	5 cut(s)	1635, 1702, 1905, 1906, 2067
BmrFI	CCNGG	2 cut(s)	796, 2229
BmrI	ACTGGG	2 cut(s)	117, 347
BmsI	GCATC	9 cut(s)	235, 826, 856, 1435, 1601, 1612, 2026, 2368, 2549
BmuI	ACTGGG	2 cut(s)	117, 347
BpmI	CTGGAG	2 cut(s)	89, 2280
Bpu1102I	GCTNAGC	1 cut(s)	471
Bpu14I	TTCGAA	1 cut(s)	2313
BpuEI	CTTGAG	3 cut(s)	723, 1199, 2263
BpuMI	CCSGG	1 cut(s)	796
BsaBI	GATNNNNATC	1 cut(s)	1705
BsaI	GGTCTC	1 cut(s)	265
BsaJI	CCNNGG	6 cut(s)	372, 1943, 2142, 2228, 2252, 2301
BsaXI	ACNNNNNCTCC	2 cut(s)	889, 919
Bsc4I	CCNNNNNNNGG	5 cut(s)	732, 1052, 1912, 1913, 2518
Bse118I	RCCGGY	1 cut(s)	2647
Bse1I	ACTGG	8 cut(s)	72, 112, 330, 353, 578, 1429, 1702, 1934
Bse8I	GATNNNNATC	1 cut(s)	1705
BseBI	CCWGG	1 cut(s)	2229
BseDI	CCNNGG	6 cut(s)	372, 1943, 2142, 2228, 2252, 2301
BseGI	GGATG	9 cut(s)	334, 820, 934, 1592, 1627, 1894, 1930, 2017, 2383
BseJI	GATNNNNATC	1 cut(s)	1705
BseLI	CCNNNNNNNGG	5 cut(s)	732, 1052, 1912, 1913, 2518
BseMII	CTCAG	7 cut(s)	80, 462, 1007, 1140, 1800, 2202, 2358
BseNI	ACTGG	8 cut(s)	72, 112, 330, 353, 578, 1429, 1702, 1934
BseRI	GAGGAG	2 cut(s)	1180, 2518
BseSI	GKGCMC	2 cut(s)	1114, 1907
BseXI	GCAGC	6 cut(s)	576, 739, 1480, 1508, 1983, 2650
BseYI	CCCAGC	1 cut(s)	1535
BsgI	GTGCAG	1 cut(s)	319
Bsh1236I	CGCG	1 cut(s)	2461
BshFI	GGCC	4 cut(s)	351, 1835, 1905, 2647
BshNI	GGYRCC	1 cut(s)	1633
BsiHKCI	CYCGRG	1 cut(s)	1775
BsiSI	CCGG	3 cut(s)	796, 2648, 2672
BslFI	GGGAC	5 cut(s)	618, 748, 1321, 1725, 2245
BslI	CCNNNNNNNGG	5 cut(s)	732, 1052, 1912, 1913, 2518
BsmAI	GTCTC	6 cut(s)	11, 265, 401, 937, 945, 966
BsmFI	GGGAC	5 cut(s)	618, 748, 1321, 1725, 2245
BsmI	GAATGC	1 cut(s)	1092
BsnI	GGCC	4 cut(s)	351, 1835, 1905, 2647
Bso31I	GGTCTC	1 cut(s)	265
BsoBI	CYCGRG	1 cut(s)	1775
Bsp119I	TTCGAA	1 cut(s)	2313
Bsp120I	GGGCCC	1 cut(s)	1903
Bsp1286I	GDGCHC	2 cut(s)	1114, 1907
Bsp1407I	TGTACA	1 cut(s)	2578
Bsp143I	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
Bsp1720I	GCTNAGC	1 cut(s)	471
Bsp19I	CCATGG	1 cut(s)	2301
BspACI	CCGC	6 cut(s)	1046, 1625, 1668, 1751, 2225, 2461
BspANI	GGCC	4 cut(s)	351, 1835, 1905, 2647
BspCNI	CTCAG	7 cut(s)	81, 463, 1006, 1139, 1801, 2203, 2359
BspFNI	CGCG	1 cut(s)	2461
BspHI	TCATGA	2 cut(s)	382, 1117
BspLI	GGNNCC	5 cut(s)	1635, 1702, 1905, 1906, 2067
BspMAI	CTGCAG	4 cut(s)	232, 1234, 1357, 1498
BspMI	ACCTGC	2 cut(s)	221, 1554
BspPI	GGATC	6 cut(s)	1182, 1369, 1695, 1708, 1890, 2154
BspT104I	TTCGAA	1 cut(s)	2313
BspT107I	GGYRCC	1 cut(s)	1633
BspTNI	GGTCTC	1 cut(s)	265
BsrBI	CCGCTC	1 cut(s)	1751
BsrFI	RCCGGY	1 cut(s)	2647
BsrGI	TGTACA	1 cut(s)	2578
BsrI	ACTGG	8 cut(s)	72, 112, 330, 353, 578, 1429, 1702, 1934
BssAI	RCCGGY	1 cut(s)	2647
BssECI	CCNNGG	6 cut(s)	372, 1943, 2142, 2228, 2252, 2301
BssMI	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
BssNAI	GTATAC	1 cut(s)	1402
BssT1I	CCWWGG	4 cut(s)	1943, 2142, 2252, 2301
Bst1107I	GTATAC	1 cut(s)	1402
Bst2UI	CCWGG	1 cut(s)	2229
Bst4CI	ACNGT	8 cut(s)	619, 1271, 1571, 1638, 2192, 2567, 2764, 2781
Bst6I	CTCTTC	7 cut(s)	264, 576, 738, 1821, 2400, 2410, 2485
BstAPI	GCANNNNNTGC	2 cut(s)	1211, 2632
BstAUI	TGTACA	1 cut(s)	2578
BstBI	TTCGAA	1 cut(s)	2313
BstC8I	GCNNGC	7 cut(s)	871, 1501, 1833, 2451, 2620, 2624, 2649
BstDSI	CCRYGG	2 cut(s)	372, 2301
BstF5I	GGATG	9 cut(s)	334, 820, 934, 1592, 1627, 1894, 1930, 2017, 2383
BstFNI	CGCG	1 cut(s)	2461
BstKTI	GATC	9 cut(s)	283, 382, 878, 1177, 1364, 1703, 1885, 2149, 2188
BstMAI	GTCTC	6 cut(s)	11, 265, 401, 937, 945, 966
BstMBI	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
BstMWI	GCNNNNNNNGC	8 cut(s)	297, 1109, 1211, 1454, 1493, 1631, 1757, 2632
BstNI	CCWGG	1 cut(s)	2229
BstNSI	RCATGY	4 cut(s)	1503, 1953, 2622, 2690
BstSCI	CCNGG	2 cut(s)	794, 2227
BstSFI	CTRYAG	8 cut(s)	228, 1215, 1230, 1353, 1494, 2424, 2535, 2780
BstSLI	GKGCMC	2 cut(s)	1114, 1907
BstUI	CGCG	1 cut(s)	2461
BstV1I	GCAGC	6 cut(s)	576, 739, 1480, 1508, 1983, 2650
BstX2I	RGATCY	3 cut(s)	1174, 1700, 2146
BstXI	CCANNNNNNTGG	1 cut(s)	2278
BstYI	RGATCY	3 cut(s)	1174, 1700, 2146
BstZ17I	GTATAC	1 cut(s)	1402
BsuRI	GGCC	4 cut(s)	351, 1835, 1905, 2647
BtgI	CCRYGG	2 cut(s)	372, 2301
BtsCI	GGATG	9 cut(s)	334, 820, 934, 1592, 1627, 1894, 1930, 2017, 2383
BtsI	GCAGTG	2 cut(s)	1227, 1678
BtsIMutI	CAGTG	5 cut(s)	65, 302, 1227, 1678, 1695
BveI	ACCTGC	2 cut(s)	221, 1554
Cac8I	GCNNGC	7 cut(s)	871, 1501, 1833, 2451, 2620, 2624, 2649
CaiI	CAGNNNCTG	2 cut(s)	839, 1569
CciI	TCATGA	2 cut(s)	382, 1117
Cfr10I	RCCGGY	1 cut(s)	2647
Cfr13I	GGNCC	5 cut(s)	350, 1903, 1904, 2065, 2654
CseI	GACGC	4 cut(s)	125, 341, 551, 620
Csp6I	GTAC	7 cut(s)	581, 675, 897, 1567, 1889, 2060, 2579
CspCI	CAANNNNNGTGG	2 cut(s)	964, 999
CviQI	GTAC	7 cut(s)	581, 675, 897, 1567, 1889, 2060, 2579
DpnI	GATC	9 cut(s)	282, 381, 877, 1176, 1363, 1702, 1884, 2148, 2187
DpnII	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
DraI	TTTAAA	2 cut(s)	366, 783
Eam1104I	CTCTTC	7 cut(s)	264, 576, 738, 1821, 2400, 2410, 2485
EarI	CTCTTC	7 cut(s)	264, 576, 738, 1821, 2400, 2410, 2485
EciI	GGCGGA	2 cut(s)	1035, 2214
Eco130I	CCWWGG	4 cut(s)	1943, 2142, 2252, 2301
Eco147I	AGGCCT	1 cut(s)	1835
Eco24I	GRGCYC	1 cut(s)	1907
Eco31I	GGTCTC	1 cut(s)	265
Eco32I	GATATC	1 cut(s)	1123
Eco47I	GGWCC	2 cut(s)	2065, 2654
Eco57I	CTGAAG	1 cut(s)	1595
Eco88I	CYCGRG	1 cut(s)	1775
EcoO109I	RGGNCCY	3 cut(s)	1903, 1904, 2065
EcoRI	GAATTC	1 cut(s)	2315
EcoRII	CCWGG	1 cut(s)	2227
EcoRV	GATATC	1 cut(s)	1123
EcoT14I	CCWWGG	4 cut(s)	1943, 2142, 2252, 2301
EcoT38I	GRGCYC	1 cut(s)	1907
ErhI	CCWWGG	4 cut(s)	1943, 2142, 2252, 2301
FalI	AAGNNNNNCTT	2 cut(s)	1122, 1154
FaqI	GGGAC	5 cut(s)	618, 748, 1321, 1725, 2245
FauNDI	CATATG	1 cut(s)	2395
FbaI	TGATCA	1 cut(s)	2185
FblI	GTMKAC	1 cut(s)	1401
Fnu4HI	GCNGC	7 cut(s)	590, 753, 1494, 1497, 1669, 1997, 2664
FokI	GGATG	9 cut(s)	341, 827, 941, 1579, 1634, 1881, 1917, 2004, 2390
FriOI	GRGCYC	1 cut(s)	1907
Fsp4HI	GCNGC	7 cut(s)	590, 753, 1494, 1497, 1669, 1997, 2664
FspBI	CTAG	7 cut(s)	638, 858, 918, 1091, 1490, 1764, 1944
GluI	GCNGC	7 cut(s)	590, 753, 1494, 1497, 1669, 1997, 2664
GsaI	CCCAGC	1 cut(s)	1539
GsuI	CTGGAG	2 cut(s)	89, 2280
HaeIII	GGCC	4 cut(s)	351, 1835, 1905, 2647
HapII	CCGG	3 cut(s)	796, 2648, 2672
HgaI	GACGC	4 cut(s)	125, 341, 551, 620
HindIII	AAGCTT	1 cut(s)	289
HpaII	CCGG	3 cut(s)	796, 2648, 2672
HphI	GGTGA	4 cut(s)	945, 1087, 1666, 2746
Hpy166II	GTNNAC	6 cut(s)	503, 583, 1402, 1939, 2053, 2563
Hpy8I	GTNNAC	6 cut(s)	503, 583, 1402, 1939, 2053, 2563
Hpy99I	CGWCG	2 cut(s)	62, 444
HpyAV	CCTTC	6 cut(s)	420, 725, 966, 1894, 2020, 2231
HpyCH4III	ACNGT	8 cut(s)	619, 1271, 1571, 1638, 2192, 2567, 2764, 2781
HpyCH4IV	ACGT	4 cut(s)	60, 433, 1508, 2038
HpyF10VI	GCNNNNNNNGC	8 cut(s)	297, 1109, 1211, 1454, 1493, 1631, 1757, 2632
HpySE526I	ACGT	4 cut(s)	60, 433, 1508, 2038
KroI	GCCGGC	1 cut(s)	2647
KroNI	GCCGGC	1 cut(s)	2649
Ksp22I	TGATCA	1 cut(s)	2185
Kzo9I	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
LmnI	GCTCC	1 cut(s)	2299
Lsp1109I	GCAGC	6 cut(s)	576, 739, 1480, 1508, 1983, 2650
LweI	GCATC	9 cut(s)	235, 826, 856, 1435, 1601, 1612, 2026, 2368, 2549
MaeI	CTAG	7 cut(s)	638, 858, 918, 1091, 1490, 1764, 1944
MaeII	ACGT	4 cut(s)	60, 433, 1508, 2038
MaeIII	GTNAC	6 cut(s)	388, 1034, 1555, 1654, 2488, 2734
MalI	GATC	9 cut(s)	282, 381, 877, 1176, 1363, 1702, 1884, 2148, 2187
MbiI	CCGCTC	1 cut(s)	1751
MboI	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
MfeI	CAATTG	1 cut(s)	150
MflI	RGATCY	3 cut(s)	1174, 1700, 2146
MhlI	GDGCHC	2 cut(s)	1114, 1907
MlyI	GAGTC	4 cut(s)	213, 730, 1552, 1611
MmeI	TCCRAC	3 cut(s)	1339, 1770, 1844
MroNI	GCCGGC	1 cut(s)	2647
MroXI	GAANNNNTTC	1 cut(s)	291
MslI	CAYNNNNRTG	4 cut(s)	958, 1443, 2193, 2685
MspA1I	CMGCKG	1 cut(s)	2663
MspI	CCGG	3 cut(s)	796, 2648, 2672
MspR9I	CCNGG	2 cut(s)	796, 2229
MunI	CAATTG	1 cut(s)	150
Mva1269I	GAATGC	1 cut(s)	1092
MvaI	CCWGG	1 cut(s)	2229
MvnI	CGCG	1 cut(s)	2461
MwoI	GCNNNNNNNGC	8 cut(s)	297, 1109, 1211, 1454, 1493, 1631, 1757, 2632
NaeI	GCCGGC	1 cut(s)	2649
NciI	CCSGG	1 cut(s)	796
NcoI	CCATGG	1 cut(s)	2301
NdeI	CATATG	1 cut(s)	2395
NdeII	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
NgoMIV	GCCGGC	1 cut(s)	2647
NlaIV	GGNNCC	5 cut(s)	1635, 1702, 1905, 1906, 2067
NmeAIII	GCCGAG	1 cut(s)	2473
NmuCI	GTSAC	4 cut(s)	388, 1555, 1654, 2734
NspI	RCATGY	4 cut(s)	1503, 1953, 2622, 2690
NspV	TTCGAA	1 cut(s)	2313
PaeI	GCATGC	2 cut(s)	1503, 2622
PaeR7I	CTCGAG	1 cut(s)	1775
PagI	TCATGA	2 cut(s)	382, 1117
PaqCI	CACCTGC	1 cut(s)	221
PceI	AGGCCT	1 cut(s)	1835
PciI	ACATGT	1 cut(s)	1949
PctI	GAATGC	1 cut(s)	1092
PdiI	GCCGGC	1 cut(s)	2649
PdmI	GAANNNNTTC	1 cut(s)	291
PfeI	GAWTC	8 cut(s)	35, 146, 197, 416, 1322, 2072, 2522, 2757
PflFI	GACNNNGTC	1 cut(s)	977
PkrI	GCNGC	7 cut(s)	591, 754, 1495, 1498, 1670, 1998, 2665
PleI	GAGTC	4 cut(s)	212, 730, 1552, 1610
PpsI	GAGTC	4 cut(s)	212, 730, 1552, 1610
PpuMI	RGGWCCY	1 cut(s)	2065
PscI	ACATGT	1 cut(s)	1949
PshBI	ATTAAT	1 cut(s)	1452
Psp1406I	AACGTT	1 cut(s)	2038
Psp5II	RGGWCCY	1 cut(s)	2065
Psp6I	CCWGG	1 cut(s)	2227
PspFI	CCCAGC	1 cut(s)	1535
PspGI	CCWGG	1 cut(s)	2227
PspN4I	GGNNCC	5 cut(s)	1635, 1702, 1905, 1906, 2067
PspOMI	GGGCCC	1 cut(s)	1903
PspPI	GGNCC	5 cut(s)	350, 1903, 1904, 2065, 2654
PspPPI	RGGWCCY	1 cut(s)	2065
PspXI	VCTCGAGB	1 cut(s)	1775
PstI	CTGCAG	4 cut(s)	232, 1234, 1357, 1498
PstNI	CAGNNNCTG	2 cut(s)	839, 1569
PsuI	RGATCY	3 cut(s)	1174, 1700, 2146
PsyI	GACNNNGTC	1 cut(s)	977
PvuII	CAGCTG	1 cut(s)	2663
RsaI	GTAC	7 cut(s)	582, 676, 898, 1568, 1890, 2061, 2580
RsaNI	GTAC	7 cut(s)	581, 675, 897, 1567, 1889, 2060, 2579
RseI	CAYNNNNRTG	4 cut(s)	958, 1443, 2193, 2685
SatI	GCNGC	7 cut(s)	590, 753, 1494, 1497, 1669, 1997, 2664
Sau3AI	GATC	9 cut(s)	280, 379, 875, 1174, 1361, 1700, 1882, 2146, 2185
Sau96I	GGNCC	5 cut(s)	350, 1903, 1904, 2065, 2654
ScaI	AGTACT	1 cut(s)	898
SchI	GAGTC	4 cut(s)	213, 730, 1552, 1611
ScrFI	CCNGG	2 cut(s)	796, 2229
SduI	GDGCHC	2 cut(s)	1114, 1907
SfaNI	GCATC	9 cut(s)	235, 826, 856, 1435, 1601, 1612, 2026, 2368, 2549
SfcI	CTRYAG	8 cut(s)	228, 1215, 1230, 1353, 1494, 2424, 2535, 2780
Sfr274I	CTCGAG	1 cut(s)	1775
SfuI	TTCGAA	1 cut(s)	2313
SinI	GGWCC	2 cut(s)	2065, 2654
SlaI	CTCGAG	1 cut(s)	1775
SmiMI	CAYNNNNRTG	4 cut(s)	958, 1443, 2193, 2685
SmlI	CTYRAG	4 cut(s)	738, 1178, 1775, 2242
SmoI	CTYRAG	4 cut(s)	738, 1178, 1775, 2242
SphI	GCATGC	2 cut(s)	1503, 2622
SseBI	AGGCCT	1 cut(s)	1835
SsiI	CCGC	6 cut(s)	1046, 1625, 1668, 1751, 2225, 2461
SspI	AATATT	2 cut(s)	854, 891
SspMI	CTAG	7 cut(s)	638, 858, 918, 1091, 1490, 1764, 1944
StuI	AGGCCT	1 cut(s)	1835
StyD4I	CCNGG	2 cut(s)	794, 2227
StyI	CCWWGG	4 cut(s)	1943, 2142, 2252, 2301
TaaI	ACNGT	8 cut(s)	619, 1271, 1571, 1638, 2192, 2567, 2764, 2781
TaiI	ACGT	4 cut(s)	63, 436, 1511, 2041
TaqI	TCGA	4 cut(s)	1364, 1650, 1776, 2313
TatI	WGTACW	5 cut(s)	580, 674, 896, 2059, 2578
TauI	GCSGC	1 cut(s)	1671
TfiI	GAWTC	8 cut(s)	35, 146, 197, 416, 1322, 2072, 2522, 2757
TscAI	CASTG	5 cut(s)	72, 302, 1227, 1678, 1702
TseFI	GTSAC	4 cut(s)	388, 1555, 1654, 2734
TseI	GCWGC	6 cut(s)	589, 752, 1493, 1496, 1996, 2663
Tsp45I	GTSAC	4 cut(s)	388, 1555, 1654, 2734
TspGWI	ACGGA	5 cut(s)	323, 361, 653, 2473, 2646
TspRI	CASTG	5 cut(s)	72, 302, 1227, 1678, 1702
Tth111I	GACNNNGTC	1 cut(s)	977
VpaK11BI	GGWCC	2 cut(s)	2065, 2654
VspI	ATTAAT	1 cut(s)	1452
XapI	RAATTY	5 cut(s)	119, 367, 1279, 2095, 2315
XceI	RCATGY	4 cut(s)	1503, 1953, 2622, 2690
XhoI	CTCGAG	1 cut(s)	1775
XmaJI	CCTAGG	1 cut(s)	1943
XmiI	GTMKAC	1 cut(s)	1401
XmnI	GAANNNNTTC	1 cut(s)	291
XspI	CTAG	7 cut(s)	638, 858, 918, 1091, 1490, 1764, 1944
ZrmI	AGTACT	1 cut(s)	898

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.