DNA repair protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16630 AT5G16630 AT5G16630 |
| fragaria_vesca | FvH4_1g28770 FvH4_1g28770 FvH4_1g28770 FvH4_1g28770 |
| malus_domestica | MD17G1258300.v1.1 |
| prunus_persica | Prupe.3G161000_v2.0.a1 Prupe.3G161000_v2.0.a1 Prupe.3G161000_v2.0.a1 Prupe.3G161000_v2.0.a1 |
| pyrus_communis | pycom17g26020 |
| rosa_chinensis | RchiOBHm_Chr3g0493161 |
| rosa_laevigata | RLG00000022722 RLG00000022723 RLG00000022724 |
| rosa_multiflora | Rmu_co8401441.1_g000001 Rmu_sc0003290.1_g000009 Rmu_sc0009488.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00391760 |
| rosa_rugosa | Rorug03G0259500 Rorug03G0259600 Rorug03G0259700 |
| rosa_samantha | Rh3AG308600 Rh3BG344700 Rh3CG341900 Rh3DG344000 |
| rosa_wichuraiana | Rw3G027140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1599 |
| AccB1I | GGYRCC | 1 cut(s) | 1678 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 289 |
| AciI | CCGC | 4 cut(s) | 1269, 1289, 1796, 2451 |
| AclI | AACGTT | 1 cut(s) | 2191 |
| AclWI | GGATC | 7 cut(s) | 273, 286, 1239, 1414, 1416, 1429, 2801 |
| AcoI | YGGCCR | 1 cut(s) | 147 |
| AcsI | RAATTY | 3 cut(s) | 436, 1771, 2468 |
| AcuI | CTGAAG | 3 cut(s) | 501, 826, 1206 |
| AfaI | GTAC | 7 cut(s) | 1433, 1448, 1613, 2043, 2214, 2730, 2825 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 289, 495, 982, 1058, 1289, 2066, 2671 |
| AflIII | ACRYGT | 1 cut(s) | 2102 |
| AjiI | CACGTC | 1 cut(s) | 164 |
| AjnI | CCWGG | 3 cut(s) | 1813, 1916, 2380 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 421, 453, 2398, 2430 |
| Alw21I | GWGCWC | 1 cut(s) | 371 |
| Alw26I | GTCTC | 7 cut(s) | 243, 287, 1014, 1622, 2422, 2693, 2903 |
| AlwI | GGATC | 7 cut(s) | 273, 286, 1239, 1414, 1416, 1429, 2801 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 908, 1614, 2387, 2629 |
| AoxI | GGCC | 7 cut(s) | 7, 147, 239, 418, 1986, 2057, 2782 |
| ApeKI | GCWGC | 7 cut(s) | 41, 658, 821, 1480, 1538, 1541, 2149 |
| ApoI | RAATTY | 3 cut(s) | 436, 1771, 2468 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2377, 2409 |
| AseI | ATTAAT | 1 cut(s) | 2316 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 360, 546 |
| AspA2I | CCTAGG | 1 cut(s) | 2096 |
| AspS9I | GGNCC | 5 cut(s) | 239, 419, 804, 1720, 2057 |
| AsuC2I | CCSGG | 2 cut(s) | 238, 865 |
| AsuHPI | GGTGA | 6 cut(s) | 137, 359, 1055, 1362, 1711, 1994 |
| AvaII | GGWCC | 2 cut(s) | 804, 1720 |
| AvrII | CCTAGG | 1 cut(s) | 2096 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2603, 2636 |
| BalI | TGGCCA | 1 cut(s) | 149 |
| BamHI | GGATCC | 2 cut(s) | 278, 1421 |
| BanI | GGYRCC | 1 cut(s) | 1678 |
| BbsI | GAAGAC | 4 cut(s) | 499, 2625, 2670, 2877 |
| Bbv12I | GWGCWC | 1 cut(s) | 371 |
| BbvCI | CCTCAGC | 1 cut(s) | 2138 |
| BbvI | GCAGC | 7 cut(s) | 53, 645, 808, 1467, 1525, 1528, 2136 |
| BccI | CCATC | 7 cut(s) | 332, 344, 410, 1505, 2007, 2495, 2822 |
| BceAI | ACGGC | 1 cut(s) | 1290 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 679, 713, 1389, 1423 |
| BciT130I | CCWGG | 3 cut(s) | 1815, 1918, 2382 |
| BciVI | GTATCC | 2 cut(s) | 102, 2649 |
| BclI | TGATCA | 1 cut(s) | 2338 |
| BcnI | CCSGG | 2 cut(s) | 238, 865 |
| BcoDI | GTCTC | 7 cut(s) | 243, 287, 1014, 1622, 2422, 2693, 2903 |
| BfmI | CTRYAG | 5 cut(s) | 1398, 1533, 2577, 2685, 2930 |
| BfuAI | ACCTGC | 1 cut(s) | 1599 |
| BfuI | GTATCC | 2 cut(s) | 102, 2649 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1851 |
| BisI | GCNGC | 7 cut(s) | 42, 659, 822, 1481, 1539, 1542, 2150 |
| BlnI | CCTAGG | 1 cut(s) | 2096 |
| BlpI | GCTNAGC | 1 cut(s) | 63 |
| BlsI | GCNGC | 7 cut(s) | 43, 660, 823, 1482, 1540, 1543, 2151 |
| Bme1390I | CCNGG | 5 cut(s) | 238, 865, 1815, 1918, 2382 |
| Bme18I | GGWCC | 2 cut(s) | 804, 1720 |
| BmgBI | CACGTC | 1 cut(s) | 164 |
| BmgT120I | GGNCC | 5 cut(s) | 239, 419, 804, 1720, 2057 |
| BmiI | GGNNCC | 8 cut(s) | 280, 805, 806, 1002, 1423, 1680, 1747, 2760 |
| BmrFI | CCNGG | 5 cut(s) | 238, 865, 1815, 1918, 2382 |
| BmrI | ACTGGG | 2 cut(s) | 416, 1444 |
| BmuI | ACTGGG | 2 cut(s) | 416, 1444 |
| BpiI | GAAGAC | 4 cut(s) | 499, 2625, 2670, 2877 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1019, 1051 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2138 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 63 |
| BpuEI | CTTGAG | 4 cut(s) | 282, 1256, 1604, 1949 |
| BpuMI | CCSGG | 2 cut(s) | 238, 865 |
| BsaJI | CCNNGG | 8 cut(s) | 288, 441, 669, 1272, 2096, 2381, 2405, 2454 |
| BsaWI | WCCGGW | 2 cut(s) | 2078, 2800 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1704, 1734 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 289, 495, 982, 1058, 1289, 2066, 2671 |
| Bse1I | ACTGG | 7 cut(s) | 422, 1092, 1439, 1474, 1747, 1870, 2087 |
| Bse3DI | GCAATG | 2 cut(s) | 1459, 1825 |
| BseBI | CCWGG | 3 cut(s) | 1815, 1918, 2382 |
| BseDI | CCNNGG | 8 cut(s) | 288, 441, 669, 1272, 2096, 2381, 2405, 2454 |
| BseGI | GGATG | 8 cut(s) | 205, 271, 343, 2047, 2083, 2536, 2774, 2809 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 289, 495, 982, 1058, 1289, 2066, 2671 |
| BseMI | GCAATG | 2 cut(s) | 1459, 1825 |
| BseNI | ACTGG | 7 cut(s) | 422, 1092, 1439, 1474, 1747, 1870, 2087 |
| BseRI | GAGGAG | 3 cut(s) | 152, 1041, 1912 |
| BseXI | GCAGC | 7 cut(s) | 53, 645, 808, 1467, 1525, 1528, 2136 |
| BseYI | CCCAGC | 1 cut(s) | 1580 |
| BshFI | GGCC | 7 cut(s) | 9, 149, 241, 420, 1988, 2059, 2784 |
| BshNI | GGYRCC | 1 cut(s) | 1678 |
| BsiHKAI | GWGCWC | 1 cut(s) | 371 |
| BsiSI | CCGG | 4 cut(s) | 237, 865, 2079, 2801 |
| BslFI | GGGAC | 3 cut(s) | 817, 2398, 2576 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 289, 495, 982, 1058, 1289, 2066, 2671 |
| BsmAI | GTCTC | 7 cut(s) | 243, 287, 1014, 1622, 2422, 2693, 2903 |
| BsmFI | GGGAC | 3 cut(s) | 817, 2398, 2576 |
| BsmI | GAATGC | 1 cut(s) | 1837 |
| BsnI | GGCC | 7 cut(s) | 9, 149, 241, 420, 1988, 2059, 2784 |
| Bsp1286I | GDGCHC | 1 cut(s) | 371 |
| Bsp1407I | TGTACA | 2 cut(s) | 2728, 2823 |
| Bsp143I | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 63 |
| Bsp19I | CCATGG | 2 cut(s) | 441, 2454 |
| BspACI | CCGC | 4 cut(s) | 1269, 1289, 1796, 2451 |
| BspANI | GGCC | 7 cut(s) | 9, 149, 241, 420, 1988, 2059, 2784 |
| BspHI | TCATGA | 3 cut(s) | 451, 796, 2830 |
| BspLI | GGNNCC | 8 cut(s) | 280, 805, 806, 1002, 1423, 1680, 1747, 2760 |
| BspMAI | CTGCAG | 1 cut(s) | 1402 |
| BspMI | ACCTGC | 1 cut(s) | 1599 |
| BspPI | GGATC | 7 cut(s) | 273, 286, 1239, 1414, 1416, 1429, 2801 |
| BspT107I | GGYRCC | 1 cut(s) | 1678 |
| BsrDI | GCAATG | 2 cut(s) | 1459, 1825 |
| BsrGI | TGTACA | 2 cut(s) | 2728, 2823 |
| BsrI | ACTGG | 7 cut(s) | 422, 1092, 1439, 1474, 1747, 1870, 2087 |
| BssECI | CCNNGG | 8 cut(s) | 288, 441, 669, 1272, 2096, 2381, 2405, 2454 |
| BssMI | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| BssT1I | CCWWGG | 6 cut(s) | 288, 441, 669, 2096, 2405, 2454 |
| Bst2UI | CCWGG | 3 cut(s) | 1815, 1918, 2382 |
| Bst4CI | ACNGT | 8 cut(s) | 274, 923, 1357, 1616, 2389, 2616, 2666, 2931 |
| Bst6I | CTCTTC | 5 cut(s) | 807, 845, 1219, 1974, 2563 |
| BstAUI | TGTACA | 2 cut(s) | 2728, 2823 |
| BstC8I | GCNNGC | 6 cut(s) | 23, 940, 1192, 1546, 2604, 2774 |
| BstDSI | CCRYGG | 3 cut(s) | 441, 1272, 2454 |
| BstEII | GGTNACC | 1 cut(s) | 2400 |
| BstF5I | GGATG | 8 cut(s) | 205, 271, 343, 2047, 2083, 2536, 2774, 2809 |
| BstKTI | GATC | 8 cut(s) | 281, 761, 1059, 1234, 1409, 1424, 2341, 2809 |
| BstMAI | GTCTC | 7 cut(s) | 243, 287, 1014, 1622, 2422, 2693, 2903 |
| BstMBI | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 47, 366, 1268, 1499, 1538, 1851, 2032 |
| BstNI | CCWGG | 3 cut(s) | 1815, 1918, 2382 |
| BstNSI | RCATGY | 5 cut(s) | 1164, 1194, 1548, 2106, 2840 |
| BstPI | GGTNACC | 1 cut(s) | 2400 |
| BstSCI | CCNGG | 5 cut(s) | 236, 863, 1813, 1916, 2380 |
| BstSFI | CTRYAG | 5 cut(s) | 1398, 1533, 2577, 2685, 2930 |
| BstV1I | GCAGC | 7 cut(s) | 53, 645, 808, 1467, 1525, 1528, 2136 |
| BstV2I | GAAGAC | 4 cut(s) | 499, 2625, 2670, 2877 |
| BstX2I | RGATCY | 3 cut(s) | 278, 1231, 1421 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1434, 1662 |
| BstYI | RGATCY | 3 cut(s) | 278, 1231, 1421 |
| BsuI | GTATCC | 2 cut(s) | 102, 2649 |
| BsuRI | GGCC | 7 cut(s) | 9, 149, 241, 420, 1988, 2059, 2784 |
| BtgI | CCRYGG | 3 cut(s) | 441, 1272, 2454 |
| BtrI | CACGTC | 1 cut(s) | 164 |
| BtsCI | GGATG | 8 cut(s) | 205, 271, 343, 2047, 2083, 2536, 2774, 2809 |
| BtsI | GCAGTG | 2 cut(s) | 1798, 2294 |
| BtsIMutI | CAGTG | 6 cut(s) | 371, 1682, 1740, 1798, 2294, 2919 |
| BveI | ACCTGC | 1 cut(s) | 1599 |
| Cac8I | GCNNGC | 6 cut(s) | 23, 940, 1192, 1546, 2604, 2774 |
| CaiI | CAGNNNCTG | 4 cut(s) | 908, 1614, 2387, 2629 |
| CciI | TCATGA | 3 cut(s) | 451, 796, 2830 |
| Cfr13I | GGNCC | 5 cut(s) | 239, 419, 804, 1720, 2057 |
| CseI | GACGC | 1 cut(s) | 2159 |
| Csp6I | GTAC | 7 cut(s) | 1432, 1447, 1612, 2042, 2213, 2729, 2824 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 85, 120 |
| CviQI | GTAC | 7 cut(s) | 1432, 1447, 1612, 2042, 2213, 2729, 2824 |
| DpnI | GATC | 8 cut(s) | 280, 760, 1058, 1233, 1408, 1423, 2340, 2808 |
| DpnII | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| EaeI | YGGCCR | 1 cut(s) | 147 |
| Eam1104I | CTCTTC | 5 cut(s) | 807, 845, 1219, 1974, 2563 |
| EarI | CTCTTC | 5 cut(s) | 807, 845, 1219, 1974, 2563 |
| EciI | GGCGGA | 1 cut(s) | 1258 |
| Eco130I | CCWWGG | 6 cut(s) | 288, 441, 669, 2096, 2405, 2454 |
| Eco147I | AGGCCT | 2 cut(s) | 1988, 2784 |
| Eco47I | GGWCC | 2 cut(s) | 804, 1720 |
| Eco57I | CTGAAG | 3 cut(s) | 501, 826, 1206 |
| Eco91I | GGTNACC | 1 cut(s) | 2400 |
| EcoO109I | RGGNCCY | 1 cut(s) | 804 |
| EcoO65I | GGTNACC | 1 cut(s) | 2400 |
| EcoRI | GAATTC | 1 cut(s) | 2468 |
| EcoRII | CCWGG | 3 cut(s) | 1813, 1916, 2380 |
| EcoT14I | CCWWGG | 6 cut(s) | 288, 441, 669, 2096, 2405, 2454 |
| ErhI | CCWWGG | 6 cut(s) | 288, 441, 669, 2096, 2405, 2454 |
| FaqI | GGGAC | 3 cut(s) | 817, 2398, 2576 |
| FauI | CCCGC | 2 cut(s) | 1282, 2458 |
| FbaI | TGATCA | 1 cut(s) | 2338 |
| Fnu4HI | GCNGC | 7 cut(s) | 42, 659, 822, 1481, 1539, 1542, 2150 |
| FokI | GGATG | 8 cut(s) | 192, 278, 350, 2034, 2070, 2543, 2781, 2816 |
| Fsp4HI | GCNGC | 7 cut(s) | 42, 659, 822, 1481, 1539, 1542, 2150 |
| GluI | GCNGC | 7 cut(s) | 42, 659, 822, 1481, 1539, 1542, 2150 |
| GsaI | CCCAGC | 1 cut(s) | 1584 |
| HaeIII | GGCC | 7 cut(s) | 9, 149, 241, 420, 1988, 2059, 2784 |
| HapII | CCGG | 4 cut(s) | 237, 865, 2079, 2801 |
| HgaI | GACGC | 1 cut(s) | 2159 |
| HincII | GTYRAC | 1 cut(s) | 1825 |
| HindII | GTYRAC | 1 cut(s) | 1825 |
| HindIII | AAGCTT | 3 cut(s) | 300, 358, 2201 |
| HpaII | CCGG | 4 cut(s) | 237, 865, 2079, 2801 |
| HphI | GGTGA | 6 cut(s) | 137, 359, 1055, 1362, 1711, 1994 |
| Hpy166II | GTNNAC | 3 cut(s) | 1447, 1825, 2720 |
| Hpy188III | TCNNGA | 9 cut(s) | 114, 452, 489, 797, 1235, 1410, 2222, 2831, 2845 |
| Hpy8I | GTNNAC | 3 cut(s) | 1447, 1825, 2720 |
| Hpy99I | CGWCG | 1 cut(s) | 513 |
| HpyAV | CCTTC | 5 cut(s) | 794, 1412, 1516, 1844, 2384 |
| HpyCH4III | ACNGT | 8 cut(s) | 274, 923, 1357, 1616, 2389, 2616, 2666, 2931 |
| HpyCH4IV | ACGT | 4 cut(s) | 163, 502, 2191, 2349 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 47, 366, 1268, 1499, 1538, 1851, 2032 |
| HpySE526I | ACGT | 4 cut(s) | 163, 502, 2191, 2349 |
| KflI | GGGWCCC | 1 cut(s) | 804 |
| Ksp22I | TGATCA | 1 cut(s) | 2338 |
| Kzo9I | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| LmnI | GCTCC | 1 cut(s) | 2452 |
| Lsp1109I | GCAGC | 7 cut(s) | 53, 645, 808, 1467, 1525, 1528, 2136 |
| MaeII | ACGT | 4 cut(s) | 163, 502, 2191, 2349 |
| MaeIII | GTNAC | 7 cut(s) | 125, 457, 1600, 2345, 2400, 2641, 2884 |
| MalI | GATC | 8 cut(s) | 280, 760, 1058, 1233, 1408, 1423, 2340, 2808 |
| MboI | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| MfeI | CAATTG | 1 cut(s) | 2253 |
| MflI | RGATCY | 3 cut(s) | 278, 1231, 1421 |
| MhlI | GDGCHC | 1 cut(s) | 371 |
| MlsI | TGGCCA | 1 cut(s) | 149 |
| MluNI | TGGCCA | 1 cut(s) | 149 |
| MlyI | GAGTC | 6 cut(s) | 242, 289, 395, 1313, 1597, 2684 |
| MmeI | TCCRAC | 5 cut(s) | 256, 1307, 1384, 1923, 1997 |
| Mox20I | TGGCCA | 1 cut(s) | 149 |
| MroXI | GAANNNNTTC | 2 cut(s) | 360, 546 |
| MscI | TGGCCA | 1 cut(s) | 149 |
| MseI | TTAA | 5 cut(s) | 572, 896, 1958, 2157, 2316 |
| MslI | CAYNNNNRTG | 4 cut(s) | 210, 1488, 2007, 2835 |
| Msp20I | TGGCCA | 1 cut(s) | 149 |
| MspA1I | CMGCKG | 1 cut(s) | 2696 |
| MspI | CCGG | 4 cut(s) | 237, 865, 2079, 2801 |
| MspR9I | CCNGG | 5 cut(s) | 238, 865, 1815, 1918, 2382 |
| MunI | CAATTG | 1 cut(s) | 2253 |
| Mva1269I | GAATGC | 1 cut(s) | 1837 |
| MvaI | CCWGG | 3 cut(s) | 1815, 1918, 2382 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 47, 366, 1268, 1499, 1538, 1851, 2032 |
| NciI | CCSGG | 2 cut(s) | 238, 865 |
| NcoI | CCATGG | 2 cut(s) | 441, 2454 |
| NdeII | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| NlaIV | GGNNCC | 8 cut(s) | 280, 805, 806, 1002, 1423, 1680, 1747, 2760 |
| NmeAIII | GCCGAG | 1 cut(s) | 2626 |
| NmuCI | GTSAC | 3 cut(s) | 125, 457, 1600 |
| NspI | RCATGY | 5 cut(s) | 1164, 1194, 1548, 2106, 2840 |
| PaeI | GCATGC | 2 cut(s) | 1194, 1548 |
| PagI | TCATGA | 3 cut(s) | 451, 796, 2830 |
| PceI | AGGCCT | 2 cut(s) | 1988, 2784 |
| PciI | ACATGT | 1 cut(s) | 2102 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1280 |
| PctI | GAATGC | 1 cut(s) | 1837 |
| PdmI | GAANNNNTTC | 2 cut(s) | 360, 546 |
| PfeI | GAWTC | 9 cut(s) | 35, 196, 485, 853, 1214, 1367, 1651, 1804, 1886 |
| PflFI | GACNNNGTC | 1 cut(s) | 1783 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 289 |
| PkrI | GCNGC | 7 cut(s) | 43, 660, 823, 1482, 1540, 1543, 2151 |
| PleI | GAGTC | 6 cut(s) | 241, 289, 395, 1313, 1597, 2683 |
| PpsI | GAGTC | 6 cut(s) | 241, 289, 395, 1313, 1597, 2683 |
| PpuMI | RGGWCCY | 1 cut(s) | 804 |
| PscI | ACATGT | 1 cut(s) | 2102 |
| PshBI | ATTAAT | 1 cut(s) | 2316 |
| Psp1406I | AACGTT | 1 cut(s) | 2191 |
| Psp5II | RGGWCCY | 1 cut(s) | 804 |
| Psp6I | CCWGG | 3 cut(s) | 1813, 1916, 2380 |
| PspEI | GGTNACC | 1 cut(s) | 2400 |
| PspFI | CCCAGC | 1 cut(s) | 1580 |
| PspGI | CCWGG | 3 cut(s) | 1813, 1916, 2380 |
| PspN4I | GGNNCC | 8 cut(s) | 280, 805, 806, 1002, 1423, 1680, 1747, 2760 |
| PspPI | GGNCC | 5 cut(s) | 239, 419, 804, 1720, 2057 |
| PspPPI | RGGWCCY | 1 cut(s) | 804 |
| PstI | CTGCAG | 1 cut(s) | 1402 |
| PstNI | CAGNNNCTG | 4 cut(s) | 908, 1614, 2387, 2629 |
| PsuI | RGATCY | 3 cut(s) | 278, 1231, 1421 |
| PsyI | GACNNNGTC | 1 cut(s) | 1783 |
| PvuII | CAGCTG | 1 cut(s) | 2696 |
| RsaI | GTAC | 7 cut(s) | 1433, 1448, 1613, 2043, 2214, 2730, 2825 |
| RsaNI | GTAC | 7 cut(s) | 1432, 1447, 1612, 2042, 2213, 2729, 2824 |
| RseI | CAYNNNNRTG | 4 cut(s) | 210, 1488, 2007, 2835 |
| SaqAI | TTAA | 5 cut(s) | 572, 896, 1958, 2157, 2316 |
| SatI | GCNGC | 7 cut(s) | 42, 659, 822, 1481, 1539, 1542, 2150 |
| Sau3AI | GATC | 8 cut(s) | 278, 758, 1056, 1231, 1406, 1421, 2338, 2806 |
| Sau96I | GGNCC | 5 cut(s) | 239, 419, 804, 1720, 2057 |
| SchI | GAGTC | 6 cut(s) | 242, 289, 395, 1313, 1597, 2684 |
| ScrFI | CCNGG | 5 cut(s) | 238, 865, 1815, 1918, 2382 |
| SduI | GDGCHC | 1 cut(s) | 371 |
| SfcI | CTRYAG | 5 cut(s) | 1398, 1533, 2577, 2685, 2930 |
| SinI | GGWCC | 2 cut(s) | 804, 1720 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 210, 1488, 2007, 2835 |
| SmlI | CTYRAG | 4 cut(s) | 297, 1235, 1619, 1928 |
| SmoI | CTYRAG | 4 cut(s) | 297, 1235, 1619, 1928 |
| SphI | GCATGC | 2 cut(s) | 1194, 1548 |
| SseBI | AGGCCT | 2 cut(s) | 1988, 2784 |
| SsiI | CCGC | 4 cut(s) | 1269, 1289, 1796, 2451 |
| SspI | AATATT | 2 cut(s) | 960, 2538 |
| StuI | AGGCCT | 2 cut(s) | 1988, 2784 |
| StyD4I | CCNGG | 5 cut(s) | 236, 863, 1813, 1916, 2380 |
| StyI | CCWWGG | 6 cut(s) | 288, 441, 669, 2096, 2405, 2454 |
| TaaI | ACNGT | 8 cut(s) | 274, 923, 1357, 1616, 2389, 2616, 2666, 2931 |
| TaiI | ACGT | 4 cut(s) | 166, 505, 2194, 2352 |
| TaqI | TCGA | 5 cut(s) | 1409, 1527, 1895, 2265, 2817 |
| TatI | WGTACW | 5 cut(s) | 1431, 1446, 2212, 2728, 2823 |
| TfiI | GAWTC | 9 cut(s) | 35, 196, 485, 853, 1214, 1367, 1651, 1804, 1886 |
| Tru1I | TTAA | 5 cut(s) | 572, 896, 1958, 2157, 2316 |
| Tru9I | TTAA | 5 cut(s) | 572, 896, 1958, 2157, 2316 |
| TscAI | CASTG | 6 cut(s) | 371, 1689, 1747, 1798, 2301, 2919 |
| TseFI | GTSAC | 3 cut(s) | 125, 457, 1600 |
| TseI | GCWGC | 7 cut(s) | 41, 658, 821, 1480, 1538, 1541, 2149 |
| Tsp45I | GTSAC | 3 cut(s) | 125, 457, 1600 |
| TspGWI | ACGGA | 1 cut(s) | 511 |
| TspRI | CASTG | 6 cut(s) | 371, 1689, 1747, 1798, 2301, 2919 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1783 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 289 |
| VpaK11BI | GGWCC | 2 cut(s) | 804, 1720 |
| VspI | ATTAAT | 1 cut(s) | 2316 |
| XapI | RAATTY | 3 cut(s) | 436, 1771, 2468 |
| XceI | RCATGY | 5 cut(s) | 1164, 1194, 1548, 2106, 2840 |
| XmaJI | CCTAGG | 1 cut(s) | 2096 |
| XmnI | GAANNNNTTC | 2 cut(s) | 360, 546 |