Prupe.3G222100_v2.0.a1

Mediator-associated protein 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
22256663 .. 22258333
1671 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G222100.1

Sequence Viewer

Length: 1299 bp
ATGGCTCAGAAGAAGCTTCTAGATGACCCACCTGTGGTGGAAGACTCCGACGAAGAAACTGTCGACGAAGAAACTGTTGACGAAGAAGAACTAGAGGAAGAAGACGACGCCGTTGAAGCTGAAGACGGCAAAGCAAAATCGGGAGATGATAACCATGACGGTGATGAAGAAGAAGGAGAAGAAGACGCCGACGAGGAAGACGAAGACGAAGAGGACAATGAGGAAAAGAAAGAGAAGGCCCTATTAACTTCTTCATCGGCGGTTTCGAATTCAAATCCCCAATGGCCATCTGCCTCCGAAGACGATTCCGGATCCGGGTCGGAAACAGAGTCCGAAAACAACAGCCAATCACCATCAGCTTCCGAATTCACCATCAAGCCTGTTGTTTCGAAGCCCATGAACGACCCCGTCAAGCCCAACAAAAAGAATGCTCCGGCGAAGCCCGCGCCGGCGTCCAATTCCGGGTCAAAGCGCCCGGAGACCGAGCTCAACAAGAAGAATGCTCCATCTTCGTCCAATTCCGGGTCAAAGCGCCGGGCGGAGACCGAGCCCAACCCGAAGGACTCTAAGAAGAAGAAGGTCGTGAACAGTGGCGATGACGATGATGGGAAAAAGGGACGGCTTTGGAGCGAAGATGATGAAATTGCGATCTTGAAGGGCATGATAGAGTACCAAGTCAAAAATGGCCCCGTAACAAATTCGACTATGGGCGCATTCCACGAGTTTATCAAGAAAAAATTGCAGGTCGATGTAAGCAAGCTGCAGTTGAGCGATAAGATCAGGAGGTTGAAGATGAAGTACCAGAAGAAGGGCGAGAATGGCGAGGACCCGGTGTTTTCCAAGCCCCACGAAGTCAAGTCCTTTGATCTATCGAAGAAGGTTTGGAGTGTTGAGGCTAACGGGGTCGATGATAACGCAAAGGACAGCAAGAGGAAGCCAAGGAAGAGCAGTAAGGTTGACAAAGCTACAGTATTGGCCTTACCTGTTTCAGATGTAGCTGAGAAGAAAGAGGAGCTGAATGTAGCTAATGGTGGAATTAAGGCTGACCCAGTTGACTTTTGGTCTAAATACCCATGCCTGAGTGGTTCTTTGGGGTTGGACAATTCCACACCGAGGTCAGATTTAACTACCCTTATGGTTCAGAAAATGCCTTTGATTGGGAAATCGAAGGCTAAAGAGTTGGAGGGAAAGTGGAGGGCCTTGCAGCTCATTGAAATGGAGTTGTCTGTCAAGAAGCTTGCTTTGATGCAGGAACAGGCTAAATTTGTATTGGATTCAATGAAGTCTTCGGAGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

433

Amino Acids

47.56

Weight (kDa)

4.77

Isoelectric Point (pI)

51.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 733
AccI GTMKAC 1 cut(s) 63
AccII CGCG 1 cut(s) 446
AccIII TCCGGA 1 cut(s) 308
AciI CCGC 3 cut(s) 260, 444, 539
AclWI GGATC 2 cut(s) 306, 319
AcoI YGGCCR 1 cut(s) 284
AcsI RAATTY 4 cut(s) 268, 365, 697, 1262
AcuI CTGAAG 1 cut(s) 141
AcyI GRCGYC 3 cut(s) 108, 186, 452
AfaI GTAC 2 cut(s) 671, 800
AfiI CCNNNNNNNGG 7 cut(s) 34, 315, 462, 522, 808, 1113, 1157
AgsI TTSAA 6 cut(s) 116, 273, 655, 790, 1214, 1278
AhdI GACNNNNNGTC 1 cut(s) 1060
Alw21I GWGCWC 1 cut(s) 489
Alw26I GTCTC 2 cut(s) 473, 536
AlwI GGATC 2 cut(s) 306, 319
Aor13HI TCCGGA 1 cut(s) 308
AoxI GGCC 5 cut(s) 237, 284, 685, 975, 1197
ApeKI GCWGC 2 cut(s) 760, 1204
ApoI RAATTY 4 cut(s) 268, 365, 697, 1262
ArsI GACNNNNNNTTYG 2 cut(s) 45, 77
AspLEI GCGC 4 cut(s) 448, 474, 534, 713
AspS9I GGNCC 4 cut(s) 238, 686, 826, 1197
AsuC2I CCSGG 6 cut(s) 316, 463, 476, 523, 536, 830
AsuHPI GGTGA 3 cut(s) 173, 342, 361
AsuII TTCGAA 2 cut(s) 266, 389
AvaII GGWCC 1 cut(s) 826
BalI TGGCCA 1 cut(s) 286
BamHI GGATCC 1 cut(s) 311
BanII GRGCYC 2 cut(s) 489, 552
BarI GAAGNNNNNNTAC 2 cut(s) 782, 814
BauI CACGAG 1 cut(s) 719
BbsI GAAGAC 8 cut(s) 48, 108, 129, 189, 204, 210, 306, 1278
Bbv12I GWGCWC 1 cut(s) 489
BbvI GCAGC 2 cut(s) 747, 1216
BccI CCATC 5 cut(s) 295, 361, 380, 514, 599
BceAI ACGGC 3 cut(s) 95, 142, 635
BcnI CCSGG 6 cut(s) 316, 463, 476, 523, 536, 830
BcoDI GTCTC 2 cut(s) 473, 536
BfaI CTAG 2 cut(s) 20, 92
BfmI CTRYAG 2 cut(s) 761, 966
BfoI RGCGCY 2 cut(s) 475, 535
BfuAI ACCTGC 1 cut(s) 733
BisI GCNGC 2 cut(s) 761, 1205
BlsI GCNGC 2 cut(s) 762, 1206
Bme1390I CCNGG 6 cut(s) 316, 463, 476, 523, 536, 830
Bme18I GGWCC 1 cut(s) 826
BmeRI GACNNNNNGTC 1 cut(s) 1060
BmgT120I GGNCC 4 cut(s) 238, 686, 826, 1197
BmiI GGNNCC 3 cut(s) 313, 688, 828
BmrFI CCNGG 6 cut(s) 316, 463, 476, 523, 536, 830
BmrI ACTGGG 1 cut(s) 1043
BmsI GCATC 1 cut(s) 1236
BmuI ACTGGG 1 cut(s) 1043
BpiI GAAGAC 8 cut(s) 48, 108, 129, 189, 204, 210, 306, 1278
Bpu14I TTCGAA 2 cut(s) 266, 389
BpuMI CCSGG 6 cut(s) 316, 463, 476, 523, 536, 830
BsaHI GRCGYC 3 cut(s) 108, 186, 452
BsaI GGTCTC 2 cut(s) 473, 536
BsaJI CCNNGG 2 cut(s) 938, 1112
BsaWI WCCGGW 1 cut(s) 308
BsaXI ACNNNNNCTCC 2 cut(s) 1175, 1205
Bsc4I CCNNNNNNNGG 7 cut(s) 34, 315, 462, 522, 808, 1113, 1157
Bse118I RCCGGY 1 cut(s) 448
Bse1I ACTGG 1 cut(s) 1049
BseAI TCCGGA 1 cut(s) 308
BseDI CCNNGG 2 cut(s) 938, 1112
BseLI CCNNNNNNNGG 7 cut(s) 34, 315, 462, 522, 808, 1113, 1157
BseMII CTCAG 3 cut(s) 20, 990, 1070
BseNI ACTGG 1 cut(s) 1049
BseRI GAGGAG 1 cut(s) 1025
BseXI GCAGC 2 cut(s) 747, 1216
Bsh1236I CGCG 1 cut(s) 446
BshFI GGCC 5 cut(s) 239, 286, 687, 977, 1199
BsiHKAI GWGCWC 1 cut(s) 489
BsiSI CCGG 9 cut(s) 309, 315, 434, 449, 462, 476, 522, 535, 830
BslFI GGGAC 1 cut(s) 630
BslI CCNNNNNNNGG 7 cut(s) 34, 315, 462, 522, 808, 1113, 1157
BsmAI GTCTC 2 cut(s) 473, 536
BsmFI GGGAC 1 cut(s) 630
BsmI GAATGC 3 cut(s) 433, 505, 713
BsnI GGCC 5 cut(s) 239, 286, 687, 977, 1199
Bso31I GGTCTC 2 cut(s) 473, 536
Bsp119I TTCGAA 2 cut(s) 266, 389
Bsp1286I GDGCHC 2 cut(s) 489, 552
Bsp13I TCCGGA 1 cut(s) 308
Bsp143I GATC 4 cut(s) 311, 648, 777, 865
BspACI CCGC 3 cut(s) 260, 444, 539
BspANI GGCC 5 cut(s) 239, 286, 687, 977, 1199
BspCNI CTCAG 3 cut(s) 19, 991, 1071
BspEI TCCGGA 1 cut(s) 308
BspFNI CGCG 1 cut(s) 446
BspLI GGNNCC 3 cut(s) 313, 688, 828
BspMAI CTGCAG 1 cut(s) 765
BspMI ACCTGC 1 cut(s) 733
BspPI GGATC 2 cut(s) 306, 319
BspQI GCTCTTC 1 cut(s) 938
BspT104I TTCGAA 2 cut(s) 266, 389
BspTNI GGTCTC 2 cut(s) 473, 536
BsrFI RCCGGY 1 cut(s) 448
BsrI ACTGG 1 cut(s) 1049
BssAI RCCGGY 1 cut(s) 448
BssECI CCNNGG 2 cut(s) 938, 1112
BssMI GATC 4 cut(s) 311, 648, 777, 865
BssNI GRCGYC 3 cut(s) 108, 186, 452
BssSI CACGAG 1 cut(s) 719
BssT1I CCWWGG 1 cut(s) 938
Bst2BI CACGAG 1 cut(s) 719
Bst4CI ACNGT 5 cut(s) 61, 76, 161, 590, 970
Bst6I CTCTTC 2 cut(s) 204, 938
BstACI GRCGYC 3 cut(s) 108, 186, 452
BstBI TTCGAA 2 cut(s) 266, 389
BstC8I GCNNGC 4 cut(s) 444, 450, 758, 1239
BstDEI CTNAG 4 cut(s) 6, 567, 999, 1079
BstFNI CGCG 1 cut(s) 446
BstH2I RGCGCY 2 cut(s) 475, 535
BstHHI GCGC 4 cut(s) 448, 474, 534, 713
BstKTI GATC 4 cut(s) 314, 651, 780, 868
BstMAI GTCTC 2 cut(s) 473, 536
BstMBI GATC 4 cut(s) 311, 648, 777, 865
BstMWI GCNNNNNNNGC 3 cut(s) 116, 443, 819
BstSCI CCNGG 6 cut(s) 314, 461, 474, 521, 534, 828
BstSFI CTRYAG 2 cut(s) 761, 966
BstUI CGCG 1 cut(s) 446
BstV1I GCAGC 2 cut(s) 747, 1216
BstV2I GAAGAC 8 cut(s) 48, 108, 129, 189, 204, 210, 306, 1278
BstX2I RGATCY 1 cut(s) 311
BstYI RGATCY 1 cut(s) 311
BsuRI GGCC 5 cut(s) 239, 286, 687, 977, 1199
BtgZI GCGATG 1 cut(s) 609
BtsIMutI CAGTG 1 cut(s) 595
BveI ACCTGC 1 cut(s) 733
Cac8I GCNNGC 4 cut(s) 444, 450, 758, 1239
CfoI GCGC 4 cut(s) 448, 474, 534, 713
Cfr10I RCCGGY 1 cut(s) 448
Cfr13I GGNCC 4 cut(s) 238, 686, 826, 1197
CseI GACGC 3 cut(s) 116, 194, 441
Csp6I GTAC 2 cut(s) 670, 799
CviAII CATG 4 cut(s) 155, 397, 661, 1074
CviQI GTAC 2 cut(s) 670, 799
DdeI CTNAG 4 cut(s) 6, 567, 999, 1079
DpnI GATC 4 cut(s) 313, 650, 779, 867
DpnII GATC 4 cut(s) 311, 648, 777, 865
DriI GACNNNNNGTC 1 cut(s) 1060
EaeI YGGCCR 1 cut(s) 284
Eam1104I CTCTTC 2 cut(s) 204, 938
Eam1105I GACNNNNNGTC 1 cut(s) 1060
EarI CTCTTC 2 cut(s) 204, 938
EciI GGCGGA 1 cut(s) 554
Ecl136II GAGCTC 1 cut(s) 487
Eco130I CCWWGG 1 cut(s) 938
Eco24I GRGCYC 2 cut(s) 489, 552
Eco31I GGTCTC 2 cut(s) 473, 536
Eco47I GGWCC 1 cut(s) 826
Eco53kI GAGCTC 1 cut(s) 487
Eco57I CTGAAG 1 cut(s) 141
EcoICRI GAGCTC 1 cut(s) 487
EcoO109I RGGNCCY 3 cut(s) 238, 826, 1197
EcoRI GAATTC 2 cut(s) 268, 365
EcoT14I CCWWGG 1 cut(s) 938
EcoT38I GRGCYC 2 cut(s) 489, 552
ErhI CCWWGG 1 cut(s) 938
FaeI CATG 4 cut(s) 158, 400, 664, 1077
FaiI YATR 6 cut(s) 156, 398, 662, 707, 1075, 1136
FaqI GGGAC 1 cut(s) 630
FatI CATG 4 cut(s) 154, 396, 660, 1073
FauI CCCGC 1 cut(s) 451
FblI GTMKAC 1 cut(s) 63
Fnu4HI GCNGC 2 cut(s) 761, 1205
FriOI GRGCYC 2 cut(s) 489, 552
Fsp4HI GCNGC 2 cut(s) 761, 1205
FspBI CTAG 2 cut(s) 20, 92
GlaI GCGC 4 cut(s) 447, 473, 533, 712
GluI GCNGC 2 cut(s) 761, 1205
HaeII RGCGCY 2 cut(s) 475, 535
HaeIII GGCC 5 cut(s) 239, 286, 687, 977, 1199
HapII CCGG 9 cut(s) 309, 315, 434, 449, 462, 476, 522, 535, 830
HgaI GACGC 3 cut(s) 116, 194, 441
HhaI GCGC 4 cut(s) 448, 474, 534, 713
Hin1I GRCGYC 3 cut(s) 108, 186, 452
Hin1II CATG 4 cut(s) 158, 400, 664, 1077
Hin6I GCGC 4 cut(s) 446, 472, 532, 711
HinP1I GCGC 4 cut(s) 446, 472, 532, 711
HincII GTYRAC 4 cut(s) 64, 79, 958, 1054
HindII GTYRAC 4 cut(s) 64, 79, 958, 1054
HindIII AAGCTT 2 cut(s) 14, 1235
HinfI GANTC 5 cut(s) 44, 305, 329, 563, 1274
HpaII CCGG 9 cut(s) 309, 315, 434, 449, 462, 476, 522, 535, 830
HphI GGTGA 3 cut(s) 173, 342, 361
Hpy166II GTNNAC 5 cut(s) 64, 79, 586, 958, 1054
Hpy188III TCNNGA 8 cut(s) 20, 141, 309, 583, 652, 730, 781, 1231
Hpy8I GTNNAC 5 cut(s) 64, 79, 586, 958, 1054
Hpy99I CGWCG 4 cut(s) 53, 68, 110, 194
HpyAV CCTTC 8 cut(s) 167, 229, 553, 571, 649, 802, 871, 1162
HpyCH4III ACNGT 5 cut(s) 61, 76, 161, 590, 970
HpyCH4V TGCA 4 cut(s) 742, 763, 1204, 1249
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 443, 819
HpyF3I CTNAG 4 cut(s) 6, 567, 999, 1079
Hsp92I GRCGYC 3 cut(s) 108, 186, 452
Hsp92II CATG 4 cut(s) 158, 400, 664, 1077
HspAI GCGC 4 cut(s) 446, 472, 532, 711
Kpn2I TCCGGA 1 cut(s) 308
KroI GCCGGC 1 cut(s) 448
KroNI GCCGGC 1 cut(s) 450
Kzo9I GATC 4 cut(s) 311, 648, 777, 865
LguI GCTCTTC 1 cut(s) 938
LmnI GCTCC 4 cut(s) 436, 508, 627, 1012
Lsp1109I GCAGC 2 cut(s) 747, 1216
LweI GCATC 1 cut(s) 1236
MaeI CTAG 2 cut(s) 20, 92
MaeIII GTNAC 1 cut(s) 691
MalI GATC 4 cut(s) 313, 650, 779, 867
MboI GATC 4 cut(s) 311, 648, 777, 865
MflI RGATCY 1 cut(s) 311
MhlI GDGCHC 2 cut(s) 489, 552
MlsI TGGCCA 1 cut(s) 286
MluNI TGGCCA 1 cut(s) 286
MlyI GAGTC 3 cut(s) 38, 338, 557
MmeI TCCRAC 4 cut(s) 72, 300, 1077, 1161
Mox20I TGGCCA 1 cut(s) 286
MreI CGCCGGCG 1 cut(s) 448
MroI TCCGGA 1 cut(s) 308
MroNI GCCGGC 1 cut(s) 448
MscI TGGCCA 1 cut(s) 286
MseI TTAA 3 cut(s) 245, 1038, 1124
MslI CAYNNNNRTG 2 cut(s) 159, 1214
Msp20I TGGCCA 1 cut(s) 286
MspI CCGG 9 cut(s) 309, 315, 434, 449, 462, 476, 522, 535, 830
MspR9I CCNGG 6 cut(s) 316, 463, 476, 523, 536, 830
Mva1269I GAATGC 3 cut(s) 433, 505, 713
MvnI CGCG 1 cut(s) 446
MwoI GCNNNNNNNGC 3 cut(s) 116, 443, 819
NaeI GCCGGC 1 cut(s) 450
NciI CCSGG 6 cut(s) 316, 463, 476, 523, 536, 830
NdeII GATC 4 cut(s) 311, 648, 777, 865
NgoMIV GCCGGC 1 cut(s) 448
NlaIII CATG 4 cut(s) 158, 400, 664, 1077
NlaIV GGNNCC 3 cut(s) 313, 688, 828
NspV TTCGAA 2 cut(s) 266, 389
PciSI GCTCTTC 1 cut(s) 938
PcsI WCGNNNNNNNCGW 2 cut(s) 198, 263
PctI GAATGC 3 cut(s) 433, 505, 713
PdiI GCCGGC 1 cut(s) 450
PfeI GAWTC 2 cut(s) 305, 1274
PflFI GACNNNGTC 1 cut(s) 407
PkrI GCNGC 2 cut(s) 762, 1206
PleI GAGTC 3 cut(s) 38, 337, 557
PpsI GAGTC 3 cut(s) 38, 337, 557
PpuMI RGGWCCY 1 cut(s) 826
Psp124BI GAGCTC 1 cut(s) 489
Psp5II RGGWCCY 1 cut(s) 826
PspN4I GGNNCC 3 cut(s) 313, 688, 828
PspPI GGNCC 4 cut(s) 238, 686, 826, 1197
PspPPI RGGWCCY 1 cut(s) 826
PstI CTGCAG 1 cut(s) 765
PsuI RGATCY 1 cut(s) 311
PsyI GACNNNGTC 1 cut(s) 407
RsaI GTAC 2 cut(s) 671, 800
RsaNI GTAC 2 cut(s) 670, 799
RseI CAYNNNNRTG 2 cut(s) 159, 1214
SacI GAGCTC 1 cut(s) 489
SalI GTCGAC 1 cut(s) 62
SapI GCTCTTC 1 cut(s) 938
SaqAI TTAA 3 cut(s) 245, 1038, 1124
SatI GCNGC 2 cut(s) 761, 1205
Sau3AI GATC 4 cut(s) 311, 648, 777, 865
Sau96I GGNCC 4 cut(s) 238, 686, 826, 1197
SchI GAGTC 3 cut(s) 38, 338, 557
ScrFI CCNGG 6 cut(s) 316, 463, 476, 523, 536, 830
SduI GDGCHC 2 cut(s) 489, 552
SfaNI GCATC 1 cut(s) 1236
SfcI CTRYAG 2 cut(s) 761, 966
SfuI TTCGAA 2 cut(s) 266, 389
SgrAI CRCCGGYG 1 cut(s) 448
SinI GGWCC 1 cut(s) 826
SmiMI CAYNNNNRTG 2 cut(s) 159, 1214
SsiI CCGC 3 cut(s) 260, 444, 539
SspMI CTAG 2 cut(s) 20, 92
SstI GAGCTC 1 cut(s) 489
StyD4I CCNGG 6 cut(s) 314, 461, 474, 521, 534, 828
StyI CCWWGG 1 cut(s) 938
TaaI ACNGT 5 cut(s) 61, 76, 161, 590, 970
TaqI TCGA 8 cut(s) 63, 266, 389, 701, 747, 872, 906, 1166
TaqII GACCGA 2 cut(s) 497, 560
TfiI GAWTC 2 cut(s) 305, 1274
Tru1I TTAA 3 cut(s) 245, 1038, 1124
Tru9I TTAA 3 cut(s) 245, 1038, 1124
TscAI CASTG 1 cut(s) 595
TseI GCWGC 2 cut(s) 760, 1204
TspDTI ATGAA 6 cut(s) 180, 243, 413, 654, 809, 1295
TspRI CASTG 1 cut(s) 595
Tth111I GACNNNGTC 1 cut(s) 407
VpaK11BI GGWCC 1 cut(s) 826
XapI RAATTY 4 cut(s) 268, 365, 697, 1262
XbaI TCTAGA 1 cut(s) 19
XcmI CCANNNNNNNNNTGG 2 cut(s) 680, 1056
XmiI GTMKAC 1 cut(s) 63
XspI CTAG 2 cut(s) 20, 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.