GYF domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g53851 FvH4_6g53851 FvH4_6g53851 FvH4_6g53851 FvH4_6g53851 |
| malus_domestica | MD09G1007900.v1.1 MD17G1002800.v1.1 |
| prunus_persica | Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 Prupe.3G309100_v2.0.a1 |
| pyrus_communis | pycom111g00620 pycom111g00630 pycom17g00650 pycom17g00660 |
| rosa_chinensis | RchiOBHm_Chr2g0176001 |
| rosa_laevigata | RLG00000022372 |
| rosa_roxburghii | Rroxscaffold_2G00076860 Rroxscaffold_2G00076870 |
| rosa_rugosa | Rorug02G0589300 Rorug02G0589400 Rorug02G0589400 |
| rosa_samantha | Rh2AG668500 Rh2BG680000 Rh2CG642900 Rh2DG693700 |
| rosa_wichuraiana | Rw2G054810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 1526, 1646 |
| Acc16I | TGCGCA | 2 cut(s) | 2502, 4548 |
| Acc36I | ACCTGC | 1 cut(s) | 2115 |
| AccB1I | GGYRCC | 2 cut(s) | 509, 2258 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 760, 809, 3784 |
| AccI | GTMKAC | 1 cut(s) | 2523 |
| AccII | CGCG | 2 cut(s) | 50, 705 |
| AcoI | YGGCCR | 3 cut(s) | 816, 3301, 4500 |
| AcsI | RAATTY | 6 cut(s) | 1447, 1957, 2059, 3759, 3925, 4037 |
| AcvI | CACGTG | 1 cut(s) | 4693 |
| AcyI | GRCGYC | 2 cut(s) | 3088, 4429 |
| AfaI | GTAC | 5 cut(s) | 197, 546, 1934, 3864, 4211 |
| AflIII | ACRYGT | 1 cut(s) | 1510 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 682 |
| AhlI | ACTAGT | 3 cut(s) | 223, 1193, 4001 |
| AjiI | CACGTC | 1 cut(s) | 1699 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2664, 2696 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1236, 1268, 4040, 4072 |
| Alw21I | GWGCWC | 2 cut(s) | 2736, 3500 |
| Alw26I | GTCTC | 9 cut(s) | 186, 294, 690, 1534, 3946, 4086, 4331, 4519, 4586 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 713, 2473, 2516, 4661 |
| Ama87I | CYCGRG | 2 cut(s) | 732, 1535 |
| ApaI | GGGCCC | 1 cut(s) | 608 |
| ApoI | RAATTY | 6 cut(s) | 1447, 1957, 2059, 3759, 3925, 4037 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3772, 3804 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 666, 2463, 4011 |
| AspA2I | CCTAGG | 1 cut(s) | 4070 |
| AspLEI | GCGC | 6 cut(s) | 118, 707, 1336, 2503, 3316, 4549 |
| AsuC2I | CCSGG | 2 cut(s) | 3887, 4433 |
| AvaI | CYCGRG | 2 cut(s) | 732, 1535 |
| AvaII | GGWCC | 9 cut(s) | 1301, 1583, 2288, 3254, 3418, 3769, 3917, 3952, 4067 |
| AvrII | CCTAGG | 1 cut(s) | 4070 |
| AxyI | CCTNAGG | 1 cut(s) | 1305 |
| BaeGI | GKGCMC | 1 cut(s) | 608 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1916, 1949 |
| BalI | TGGCCA | 2 cut(s) | 818, 3303 |
| BamHI | GGATCC | 1 cut(s) | 3292 |
| BanI | GGYRCC | 2 cut(s) | 509, 2258 |
| BanII | GRGCYC | 2 cut(s) | 608, 2736 |
| BbrPI | CACGTG | 1 cut(s) | 4693 |
| BbsI | GAAGAC | 4 cut(s) | 20, 543, 2022, 3872 |
| Bbv12I | GWGCWC | 2 cut(s) | 2736, 3500 |
| BceAI | ACGGC | 4 cut(s) | 426, 1750, 2477, 2560 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1497, 1531, 4653, 4687 |
| BciVI | GTATCC | 5 cut(s) | 460, 1448, 2311, 4093, 4770 |
| BclI | TGATCA | 3 cut(s) | 148, 2221, 2299 |
| BcnI | CCSGG | 2 cut(s) | 3887, 4433 |
| BcoDI | GTCTC | 9 cut(s) | 186, 294, 690, 1534, 3946, 4086, 4331, 4519, 4586 |
| BcuI | ACTAGT | 3 cut(s) | 223, 1193, 4001 |
| BfmI | CTRYAG | 8 cut(s) | 884, 2370, 2618, 2867, 3224, 3798, 3934, 4327 |
| BfoI | RGCGCY | 1 cut(s) | 119 |
| BfuAI | ACCTGC | 1 cut(s) | 2115 |
| BfuI | GTATCC | 5 cut(s) | 460, 1448, 2311, 4093, 4770 |
| BglII | AGATCT | 2 cut(s) | 37, 4022 |
| BlnI | CCTAGG | 1 cut(s) | 4070 |
| BlpI | GCTNAGC | 2 cut(s) | 1755, 2427 |
| BmcAI | AGTACT | 1 cut(s) | 546 |
| Bme18I | GGWCC | 9 cut(s) | 1301, 1583, 2288, 3254, 3418, 3769, 3917, 3952, 4067 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 682 |
| BmeT110I | CYCGRG | 2 cut(s) | 732, 1535 |
| BmgBI | CACGTC | 1 cut(s) | 1699 |
| BmrI | ACTGGG | 1 cut(s) | 3794 |
| BmuI | ACTGGG | 1 cut(s) | 3794 |
| BpiI | GAAGAC | 4 cut(s) | 20, 543, 2022, 3872 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1454, 1486, 1859, 1891, 4372, 4404 |
| BpmI | CTGGAG | 4 cut(s) | 1284, 1913, 2720, 2831 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1755, 2427 |
| BpuEI | CTTGAG | 6 cut(s) | 18, 1456, 1551, 1861, 4509, 4598 |
| BpuMI | CCSGG | 2 cut(s) | 3887, 4433 |
| BsaAI | YACGTR | 1 cut(s) | 4693 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3483 |
| BsaHI | GRCGYC | 2 cut(s) | 3088, 4429 |
| BsaWI | WCCGGW | 1 cut(s) | 4773 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3846, 3876, 4353, 4383 |
| Bse21I | CCTNAGG | 1 cut(s) | 1305 |
| Bse3DI | GCAATG | 3 cut(s) | 1432, 2957, 3053 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3483 |
| BseJI | GATNNNNATC | 1 cut(s) | 3483 |
| BseMI | GCAATG | 3 cut(s) | 1432, 2957, 3053 |
| BseRI | GAGGAG | 4 cut(s) | 32, 358, 401, 404 |
| BseSI | GKGCMC | 1 cut(s) | 608 |
| BseX3I | CGGCCG | 1 cut(s) | 4500 |
| BseYI | CCCAGC | 1 cut(s) | 1421 |
| BsgI | GTGCAG | 2 cut(s) | 1791, 2529 |
| Bsh1236I | CGCG | 2 cut(s) | 50, 705 |
| Bsh1285I | CGRYCG | 2 cut(s) | 3653, 4503 |
| BshNI | GGYRCC | 2 cut(s) | 509, 2258 |
| BsiEI | CGRYCG | 2 cut(s) | 3653, 4503 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2736, 3500 |
| BsiHKCI | CYCGRG | 2 cut(s) | 732, 1535 |
| BsiSI | CCGG | 4 cut(s) | 3886, 4432, 4499, 4774 |
| BslFI | GGGAC | 5 cut(s) | 903, 1596, 2274, 2527, 3431 |
| BsmAI | GTCTC | 9 cut(s) | 186, 294, 690, 1534, 3946, 4086, 4331, 4519, 4586 |
| BsmFI | GGGAC | 5 cut(s) | 903, 1596, 2274, 2527, 3431 |
| BsmI | GAATGC | 4 cut(s) | 355, 1905, 1950, 3454 |
| BsoBI | CYCGRG | 2 cut(s) | 732, 1535 |
| Bsp120I | GGGCCC | 1 cut(s) | 604 |
| Bsp1286I | GDGCHC | 3 cut(s) | 608, 2736, 3500 |
| Bsp1407I | TGTACA | 1 cut(s) | 3862 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1755, 2427 |
| Bsp19I | CCATGG | 1 cut(s) | 3702 |
| BspFNI | CGCG | 2 cut(s) | 50, 705 |
| BspMAI | CTGCAG | 3 cut(s) | 888, 2871, 3228 |
| BspMI | ACCTGC | 1 cut(s) | 2115 |
| BspT107I | GGYRCC | 2 cut(s) | 509, 2258 |
| BsrDI | GCAATG | 3 cut(s) | 1432, 2957, 3053 |
| BsrGI | TGTACA | 1 cut(s) | 3862 |
| BssNI | GRCGYC | 2 cut(s) | 3088, 4429 |
| BssT1I | CCWWGG | 6 cut(s) | 90, 2284, 3702, 4070, 4401, 4750 |
| Bst4CI | ACNGT | 7 cut(s) | 549, 1241, 1387, 2325, 3545, 3737, 3984 |
| Bst6I | CTCTTC | 4 cut(s) | 571, 1083, 1788, 4359 |
| BstACI | GRCGYC | 2 cut(s) | 3088, 4429 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 1079, 2016, 2437, 2800, 4661 |
| BstAUI | TGTACA | 1 cut(s) | 3862 |
| BstBAI | YACGTR | 1 cut(s) | 4693 |
| BstDSI | CCRYGG | 2 cut(s) | 13, 3702 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 903 |
| BstFNI | CGCG | 2 cut(s) | 50, 705 |
| BstH2I | RGCGCY | 1 cut(s) | 119 |
| BstHHI | GCGC | 6 cut(s) | 118, 707, 1336, 2503, 3316, 4549 |
| BstMAI | GTCTC | 9 cut(s) | 186, 294, 690, 1534, 3946, 4086, 4331, 4519, 4586 |
| BstMCI | CGRYCG | 2 cut(s) | 3653, 4503 |
| BstNSI | RCATGY | 8 cut(s) | 254, 1025, 1514, 1754, 3456, 3601, 4189, 4612 |
| BstSFI | CTRYAG | 8 cut(s) | 884, 2370, 2618, 2867, 3224, 3798, 3934, 4327 |
| BstSLI | GKGCMC | 1 cut(s) | 608 |
| BstUI | CGCG | 2 cut(s) | 50, 705 |
| BstV2I | GAAGAC | 4 cut(s) | 20, 543, 2022, 3872 |
| BstX2I | RGATCY | 6 cut(s) | 37, 1673, 3049, 3292, 4022, 4791 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1262, 2534, 3962 |
| BstYI | RGATCY | 6 cut(s) | 37, 1673, 3049, 3292, 4022, 4791 |
| BstZI | CGGCCG | 1 cut(s) | 4500 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1305 |
| BsuI | GTATCC | 5 cut(s) | 460, 1448, 2311, 4093, 4770 |
| BtgI | CCRYGG | 2 cut(s) | 13, 3702 |
| BtgZI | GCGATG | 1 cut(s) | 740 |
| BtrI | CACGTC | 1 cut(s) | 1699 |
| BtsI | GCAGTG | 6 cut(s) | 1138, 1483, 1853, 2017, 4306, 4579 |
| BtsIMutI | CAGTG | 9 cut(s) | 1138, 1246, 1394, 1483, 1853, 2017, 2416, 4306, 4579 |
| BveI | ACCTGC | 1 cut(s) | 2115 |
| CaiI | CAGNNNCTG | 4 cut(s) | 713, 2473, 2516, 4661 |
| CfoI | GCGC | 6 cut(s) | 118, 707, 1336, 2503, 3316, 4549 |
| CsiI | ACCWGGT | 1 cut(s) | 256 |
| Csp6I | GTAC | 5 cut(s) | 196, 545, 1933, 3863, 4210 |
| CviQI | GTAC | 5 cut(s) | 196, 545, 1933, 3863, 4210 |
| DraI | TTTAAA | 2 cut(s) | 1278, 1344 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1526, 1646 |
| DriI | GACNNNNNGTC | 1 cut(s) | 682 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1526, 1646 |
| EaeI | YGGCCR | 3 cut(s) | 816, 3301, 4500 |
| EagI | CGGCCG | 1 cut(s) | 4500 |
| Eam1104I | CTCTTC | 4 cut(s) | 571, 1083, 1788, 4359 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 682 |
| EarI | CTCTTC | 4 cut(s) | 571, 1083, 1788, 4359 |
| Ecl136II | GAGCTC | 1 cut(s) | 2734 |
| EclXI | CGGCCG | 1 cut(s) | 4500 |
| Eco130I | CCWWGG | 6 cut(s) | 90, 2284, 3702, 4070, 4401, 4750 |
| Eco147I | AGGCCT | 1 cut(s) | 1999 |
| Eco24I | GRGCYC | 2 cut(s) | 608, 2736 |
| Eco47I | GGWCC | 9 cut(s) | 1301, 1583, 2288, 3254, 3418, 3769, 3917, 3952, 4067 |
| Eco52I | CGGCCG | 1 cut(s) | 4500 |
| Eco53kI | GAGCTC | 1 cut(s) | 2734 |
| Eco72I | CACGTG | 1 cut(s) | 4693 |
| Eco81I | CCTNAGG | 1 cut(s) | 1305 |
| Eco88I | CYCGRG | 2 cut(s) | 732, 1535 |
| EcoICRI | GAGCTC | 1 cut(s) | 2734 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 903 |
| EcoO109I | RGGNCCY | 3 cut(s) | 604, 605, 1583 |
| EcoRI | GAATTC | 1 cut(s) | 3925 |
| EcoT14I | CCWWGG | 6 cut(s) | 90, 2284, 3702, 4070, 4401, 4750 |
| EcoT22I | ATGCAT | 3 cut(s) | 252, 322, 3454 |
| EcoT38I | GRGCYC | 2 cut(s) | 608, 2736 |
| ErhI | CCWWGG | 6 cut(s) | 90, 2284, 3702, 4070, 4401, 4750 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 12, 44, 2448, 2480, 4000, 4032 |
| FaqI | GGGAC | 5 cut(s) | 903, 1596, 2274, 2527, 3431 |
| FauI | CCCGC | 4 cut(s) | 55, 380, 3608, 4247 |
| FbaI | TGATCA | 3 cut(s) | 148, 2221, 2299 |
| FblI | GTMKAC | 1 cut(s) | 2523 |
| FriOI | GRGCYC | 2 cut(s) | 608, 2736 |
| FspI | TGCGCA | 2 cut(s) | 2502, 4548 |
| GlaI | GCGC | 6 cut(s) | 117, 706, 1335, 2502, 3315, 4548 |
| GsaI | CCCAGC | 1 cut(s) | 1425 |
| GsuI | CTGGAG | 4 cut(s) | 1284, 1913, 2720, 2831 |
| HaeII | RGCGCY | 1 cut(s) | 119 |
| HapII | CCGG | 4 cut(s) | 3886, 4432, 4499, 4774 |
| HhaI | GCGC | 6 cut(s) | 118, 707, 1336, 2503, 3316, 4549 |
| Hin1I | GRCGYC | 2 cut(s) | 3088, 4429 |
| Hin6I | GCGC | 6 cut(s) | 116, 705, 1334, 2501, 3314, 4547 |
| HinP1I | GCGC | 6 cut(s) | 116, 705, 1334, 2501, 3314, 4547 |
| HincII | GTYRAC | 3 cut(s) | 676, 2627, 3548 |
| HindII | GTYRAC | 3 cut(s) | 676, 2627, 3548 |
| HpaII | CCGG | 4 cut(s) | 3886, 4432, 4499, 4774 |
| Hpy166II | GTNNAC | 6 cut(s) | 676, 1244, 1851, 2524, 2627, 3548 |
| Hpy8I | GTNNAC | 6 cut(s) | 676, 1244, 1851, 2524, 2627, 3548 |
| Hpy99I | CGWCG | 1 cut(s) | 3687 |
| HpyCH4III | ACNGT | 7 cut(s) | 549, 1241, 1387, 2325, 3545, 3737, 3984 |
| HpyCH4IV | ACGT | 8 cut(s) | 236, 718, 1431, 1698, 2716, 3244, 4221, 4692 |
| HpySE526I | ACGT | 8 cut(s) | 236, 718, 1431, 1698, 2716, 3244, 4221, 4692 |
| Hsp92I | GRCGYC | 2 cut(s) | 3088, 4429 |
| HspAI | GCGC | 6 cut(s) | 116, 705, 1334, 2501, 3314, 4547 |
| Ksp22I | TGATCA | 3 cut(s) | 148, 2221, 2299 |
| MabI | ACCWGGT | 1 cut(s) | 256 |
| MaeII | ACGT | 8 cut(s) | 236, 718, 1431, 1698, 2716, 3244, 4221, 4692 |
| MfeI | CAATTG | 3 cut(s) | 141, 2672, 4245 |
| MflI | RGATCY | 6 cut(s) | 37, 1673, 3049, 3292, 4022, 4791 |
| MhlI | GDGCHC | 3 cut(s) | 608, 2736, 3500 |
| MlsI | TGGCCA | 2 cut(s) | 818, 3303 |
| MluNI | TGGCCA | 2 cut(s) | 818, 3303 |
| MlyI | GAGTC | 6 cut(s) | 146, 620, 1846, 3509, 3725, 4679 |
| Mox20I | TGGCCA | 2 cut(s) | 818, 3303 |
| Mph1103I | ATGCAT | 3 cut(s) | 252, 322, 3454 |
| MroXI | GAANNNNTTC | 3 cut(s) | 666, 2463, 4011 |
| MscI | TGGCCA | 2 cut(s) | 818, 3303 |
| MslI | CAYNNNNRTG | 5 cut(s) | 507, 598, 3666, 3960, 4607 |
| Msp20I | TGGCCA | 2 cut(s) | 818, 3303 |
| MspI | CCGG | 4 cut(s) | 3886, 4432, 4499, 4774 |
| MunI | CAATTG | 3 cut(s) | 141, 2672, 4245 |
| Mva1269I | GAATGC | 4 cut(s) | 355, 1905, 1950, 3454 |
| MvnI | CGCG | 2 cut(s) | 50, 705 |
| NciI | CCSGG | 2 cut(s) | 3887, 4433 |
| NcoI | CCATGG | 1 cut(s) | 3702 |
| NmuCI | GTSAC | 6 cut(s) | 451, 1201, 1311, 1484, 1694, 4222 |
| NsbI | TGCGCA | 2 cut(s) | 2502, 4548 |
| NsiI | ATGCAT | 3 cut(s) | 252, 322, 3454 |
| NspI | RCATGY | 8 cut(s) | 254, 1025, 1514, 1754, 3456, 3601, 4189, 4612 |
| PaeI | GCATGC | 3 cut(s) | 254, 1754, 3601 |
| PasI | CCCWGGG | 2 cut(s) | 945, 1579 |
| PceI | AGGCCT | 1 cut(s) | 1999 |
| PciI | ACATGT | 1 cut(s) | 1510 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4218 |
| PctI | GAATGC | 4 cut(s) | 355, 1905, 1950, 3454 |
| PdmI | GAANNNNTTC | 3 cut(s) | 666, 2463, 4011 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 760, 809, 3784 |
| PfoI | TCCNGGA | 3 cut(s) | 1990, 3885, 3948 |
| PleI | GAGTC | 6 cut(s) | 145, 620, 1846, 3509, 3724, 4678 |
| PmaCI | CACGTG | 1 cut(s) | 4693 |
| PmlI | CACGTG | 1 cut(s) | 4693 |
| PpsI | GAGTC | 6 cut(s) | 145, 620, 1846, 3509, 3724, 4678 |
| Ppu21I | YACGTR | 1 cut(s) | 4693 |
| PpuMI | RGGWCCY | 1 cut(s) | 1583 |
| PscI | ACATGT | 1 cut(s) | 1510 |
| Psp124BI | GAGCTC | 1 cut(s) | 2736 |
| Psp5II | RGGWCCY | 1 cut(s) | 1583 |
| PspCI | CACGTG | 1 cut(s) | 4693 |
| PspFI | CCCAGC | 1 cut(s) | 1421 |
| PspOMI | GGGCCC | 1 cut(s) | 604 |
| PspPPI | RGGWCCY | 1 cut(s) | 1583 |
| PstI | CTGCAG | 3 cut(s) | 888, 2871, 3228 |
| PstNI | CAGNNNCTG | 4 cut(s) | 713, 2473, 2516, 4661 |
| PsuI | RGATCY | 6 cut(s) | 37, 1673, 3049, 3292, 4022, 4791 |
| PvuII | CAGCTG | 7 cut(s) | 2473, 2782, 2809, 3223, 3622, 4054, 4124 |
| RsaI | GTAC | 5 cut(s) | 197, 546, 1934, 3864, 4211 |
| RsaNI | GTAC | 5 cut(s) | 196, 545, 1933, 3863, 4210 |
| RseI | CAYNNNNRTG | 5 cut(s) | 507, 598, 3666, 3960, 4607 |
| SacI | GAGCTC | 1 cut(s) | 2736 |
| ScaI | AGTACT | 1 cut(s) | 546 |
| SchI | GAGTC | 6 cut(s) | 146, 620, 1846, 3509, 3725, 4679 |
| SduI | GDGCHC | 3 cut(s) | 608, 2736, 3500 |
| SexAI | ACCWGGT | 1 cut(s) | 256 |
| SfcI | CTRYAG | 8 cut(s) | 884, 2370, 2618, 2867, 3224, 3798, 3934, 4327 |
| SinI | GGWCC | 9 cut(s) | 1301, 1583, 2288, 3254, 3418, 3769, 3917, 3952, 4067 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 507, 598, 3666, 3960, 4607 |
| SmlI | CTYRAG | 6 cut(s) | 33, 1471, 1566, 1876, 4524, 4613 |
| SmoI | CTYRAG | 6 cut(s) | 33, 1471, 1566, 1876, 4524, 4613 |
| SpeI | ACTAGT | 3 cut(s) | 223, 1193, 4001 |
| SphI | GCATGC | 3 cut(s) | 254, 1754, 3601 |
| SseBI | AGGCCT | 1 cut(s) | 1999 |
| SspI | AATATT | 2 cut(s) | 1831, 2356 |
| SstI | GAGCTC | 1 cut(s) | 2736 |
| StuI | AGGCCT | 1 cut(s) | 1999 |
| StyI | CCWWGG | 6 cut(s) | 90, 2284, 3702, 4070, 4401, 4750 |
| TaaI | ACNGT | 7 cut(s) | 549, 1241, 1387, 2325, 3545, 3737, 3984 |
| TaiI | ACGT | 8 cut(s) | 239, 721, 1434, 1701, 2719, 3247, 4224, 4695 |
| TaqI | TCGA | 5 cut(s) | 296, 631, 1638, 3649, 4798 |
| TaqII | GACCGA | 2 cut(s) | 74, 3435 |
| TatI | WGTACW | 2 cut(s) | 544, 3862 |
| TauI | GCSGC | 3 cut(s) | 378, 800, 4505 |
| TscAI | CASTG | 9 cut(s) | 1138, 1246, 1401, 1483, 1853, 2017, 2416, 4306, 4579 |
| TseFI | GTSAC | 6 cut(s) | 451, 1201, 1311, 1484, 1694, 4222 |
| Tsp45I | GTSAC | 6 cut(s) | 451, 1201, 1311, 1484, 1694, 4222 |
| TspGWI | ACGGA | 2 cut(s) | 30, 891 |
| TspRI | CASTG | 9 cut(s) | 1138, 1246, 1401, 1483, 1853, 2017, 2416, 4306, 4579 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 760, 809, 3784 |
| VpaK11BI | GGWCC | 9 cut(s) | 1301, 1583, 2288, 3254, 3418, 3769, 3917, 3952, 4067 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 903 |
| XapI | RAATTY | 6 cut(s) | 1447, 1957, 2059, 3759, 3925, 4037 |
| XbaI | TCTAGA | 1 cut(s) | 3466 |
| XceI | RCATGY | 8 cut(s) | 254, 1025, 1514, 1754, 3456, 3601, 4189, 4612 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 826, 4039 |
| XmaJI | CCTAGG | 1 cut(s) | 4070 |
| XmiI | GTMKAC | 1 cut(s) | 2523 |
| XmnI | GAANNNNTTC | 3 cut(s) | 666, 2463, 4011 |
| ZrmI | AGTACT | 1 cut(s) | 546 |
| Zsp2I | ATGCAT | 3 cut(s) | 252, 322, 3454 |