Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001019

Physical Location & Seq

Genomic Coordinates Forward (+)

26993181 .. 26998283

Gene Structure 5103 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G311000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGGATTGCCTCAAGTTCCCTCAACTGGAACTTCTGAGGAAGTACCAGCTGCATCTCTGGGCTCGTTTTTACAAAGCCCACCTCGGTTTTCTAGTATGAGCACCTGTGATATGGATGGGATGCATGGCGGGACTGCAAGTCGAATGGGGGGAAATCCATTATGCTCCTCTTTAGGAGATTACCAGACAAGAGCCTCTCTGGAATTTTCAAGGTTCCCTGATGATTCATTTAGTTTGAGAAGGACCACAGAAGTTACCAACAATGTTCATGGTTTGACAATTGGTTCTGTTGATAAATCTGGTCAGATCACTCCGAAAAATGGGCGGAATATTCAGACCCCTGCTTCTAGGATTGTAGGATTTGAATCAAGTGGAACAAGTTCTCTAAATGATGGCTCCAAGGGTGTTTTATCTGGTCATGTTCACTCTTCTTCTGCAGTTAATGTTACAACTAATGATGTTGTGAACAGTGGATCACTAGTCAGGAAGCGGTTGTTGTCACCATTGACTGGTATGCTTTTTCCAGATCAGTTTAATGGTGACCATTTAGACATTGGTTGCAGAAATTCTCGAACAAATTCTCCCACTGTGAGTGAAAATTTCTGTGCATCTATTGCACATGATTATAAGAAAGCAAATGTTGGGAGCAAAAATCACTTTACAATGCCAACTTGGTCTCTATCTAGTTGTTTGGAGCAGAAGAACATGCCACATGATATTAGTAGCATGGAATCCGTTATTTTCACTGATGGCCCTTTGCTGGAAAACAAGGATCCCCTACCTCATAATAGTTATTCATCTTCACCCAGACTTTTGAGAGAGTTGACTAATGCAAAAGCCCAGAGTGGGGCAATATTCATATCACCACGAGAAGTGATCTCGCCTTCGCATTCGTTATCACCTCTTGGCCCCAAGTTGTCTGAAAGATTTAAAACCGTAGGGGGCTGCAGGACTGCTAATAAAGAGTTGGAGGATTGTCATTCAACCTTAAGGAATGTAAAACAAACACTTGACAAGTCTGATCCAGACATTCTATTTTCCCCTGAAGTAGGGGAGTTTAGGATTGCTAGTAAATTATTTGAAGATGTTGATATTTTTCAGAAGGACTTCCATCCATCGTCTCTAGAAAATGGTACTGGCGTAAGTTATTCTTTGTCCCAAGGGTCCCAATGCATGAGATTTGTTAGAAGTTTGAGTGGACTTCCTGTTCGGAGATCCCTGGTTGGTTCATTCGAAGAATCTCTACTGTCTGGTCGATTCTTATCAGGGAAACCCAGCCAGAGAATCGACGGTTTTCTGGCTGTACTAAGCATCACTGGGGGAAACTTTTCTCCACAATCACAGAAGCTTCCTTTTTCAGTAACTAGTGTAGAAGGAGACTGCTATTTATTGTATTGTGCATCCATACACCTTGCGGGAAATTCTGCGTTGAATAGGAGTGGAGGACAAAAGCTGAAACGAGGCCTTAGCAATGATGGTTCACAGATTGTCACAAGCCGCCTGCGCATTCCTGTGAAGGGCCGTATACAACTGGTTCTAAGCAATCCAGAGAAGACACCTATTCATACTTTCCTTTGCAACTATGATTTAAGTGACATGCCAGCTGGTACCAAAACCTTCTTGCGCCAGAAGGTCACCTTAGCTTCATGTAGCCCAACTTCTACACAGTCAAAACAAGGGAAGACTGATTTGCATGCAAAAGTCATAGACAAGACGGAATTAAAGAATCCAGCTGGAGTAGACGTTGTGCAAAGAACAAGATCTGTAGATCAGAAAACCGAAATTAGAAGTGAGTGCTCTGATTTAGTGGATTCAATCGATGAGGGGGATATGTCCAAGTTGTCCCCTAAAACAGGAAGGGTGTGCACTCGTTCATTCATTGTTGAGAAGAGCTTTAATGATGATGAGTACCCGAGCAGTAATGGGAAGGAGCGCAACTGGGTTGATGGCTGCCATGAAACTGACAGCAAACAAGTACATGGTTGTTCGAGGGTAAATCAAAATAGTAATGGTGGTCTTCGCTATGCACTTCATCTCCGTTTCATATGCCCTTTTCCTAAAAAATGTTCTAGGTCGGTTCAGAGATGCAAATCAGATCCCCTATCTACACCAGAAAGAACGGGATTAGACATGGATGGGGAGCGCAGATTCTACTTATACAATGACTTGAGGGTTGTGTTCCCCCAACGCCACTCAGATGCTGATGAGGGGAAGTTGAACGTGGAATACCATTTCCCAGATGATCCGAAATACTTTGTCATCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chromosome_seg DUF4210

Protein Analysis

756

Amino Acids

82.66

Weight (kDa)

8.49

Isoelectric Point (pI)

49.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001019)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT5G41110 AT5G41110 AT5G41110
fragaria_vesca	FvH4_3g02970 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_6g54040 FvH4_6g54040 FvH4_6g54040
malus_domestica	MD06G1134000.v1.1 MD09G1006000.v1.1 MD14G1150300.v1.1 MD17G1010000.v1.1
prunus_persica	Prupe.3G311000_v2.0.a1 Prupe.3G311000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1
pyrus_communis	pycom03g07800 pycom06g12520 pycom111g00440 pycom14g12490 pycom17g00450
rosa_chinensis	RchiOBHm_Chr2g0176221 RchiOBHm_Chr7g0189131
rosa_laevigata	RLG00000004630 RLG00000022392
rosa_multiflora	Rmu_co8469623.1_g000001 Rmu_sc0000405.1_g000014 Rmu_sc0007859.1_g000006
rosa_roxburghii	Rroxscaffold_2G00076670 Rroxscaffold_3G00265760
rosa_rugosa	Rorug02G0591900 Rorug02G0591900 Rorug02G0592000 Rorug06G0496100
rosa_samantha	Rh1DG179700 Rh2AG670500 Rh2BG682000 Rh2CG644800 Rh2DG695600 Rh7AG100900 Rh7BG103500 Rh7CG104900 Rh7DG102800
rosa_wichuraiana	Rw2G055000 Rw7G008710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	627
Acc16I	TGCGCA	1 cut(s)	1505
Acc65I	GGTACC	1 cut(s)	1607
AccB1I	GGYRCC	1 cut(s)	1607
AccB7I	CCANNNNNTGG	1 cut(s)	509
AccI	GTMKAC	2 cut(s)	1525, 1740
AciI	CCGC	5 cut(s)	129, 325, 490, 1415, 1498
AclWI	GGATC	7 cut(s)	481, 767, 780, 1016, 1209, 2090, 2237
AcsI	RAATTY	5 cut(s)	203, 565, 577, 598, 1420
AcuI	CTGAAG	1 cut(s)	1065
AfaI	GTAC	6 cut(s)	45, 1135, 1305, 1609, 1910, 1977
AfiI	CCNNNNNNNGG	9 cut(s)	26, 320, 509, 760, 846, 847, 1049, 1517, 1853
AflII	CTTAAG	1 cut(s)	988
AgsI	TTSAA	7 cut(s)	210, 365, 984, 1082, 1432, 1815, 2218
AhdI	GACNNNNNGTC	1 cut(s)	138
AhlI	ACTAGT	2 cut(s)	478, 1364
AjnI	CCWGG	1 cut(s)	1218
AloI	GAACNNNNNNTCC	4 cut(s)	565, 597, 1191, 1223
AluBI	AGCT	7 cut(s)	50, 1348, 1453, 1604, 1643, 1733, 1893
AluI	AGCT	7 cut(s)	50, 1348, 1453, 1604, 1643, 1733, 1893
Alw21I	GWGCWC	3 cut(s)	104, 1799, 1868
Alw26I	GTCTC	3 cut(s)	681, 1125, 1371
Alw44I	GTGCAC	1 cut(s)	1864
AlwI	GGATC	7 cut(s)	481, 767, 780, 1016, 1209, 2090, 2237
AlwNI	CAGNNNCTG	1 cut(s)	2201
Ama87I	CYCGRG	1 cut(s)	1912
AoxI	GGCC	4 cut(s)	751, 907, 1462, 1519
ApaLI	GTGCAC	1 cut(s)	1864
ApeKI	GCWGC	3 cut(s)	50, 945, 1950
ApoI	RAATTY	5 cut(s)	203, 565, 577, 598, 1420
ArsI	GACNNNNNNTTYG	2 cut(s)	1191, 1223
Asp700I	GAANNNNTTC	4 cut(s)	379, 577, 1106, 1327
Asp718I	GGTACC	1 cut(s)	1607
AspLEI	GCGC	4 cut(s)	1506, 1626, 1935, 2145
AspS9I	GGNCC	5 cut(s)	243, 752, 908, 1164, 1519
AsuHPI	GGTGA	6 cut(s)	492, 551, 795, 855, 891, 1627
AsuII	TTCGAA	1 cut(s)	1233
AvaI	CYCGRG	1 cut(s)	1912
AvaII	GGWCC	2 cut(s)	243, 1164
BaeGI	GKGCMC	1 cut(s)	1868
BaeI	ACNNNNGTAYC	2 cut(s)	1125, 1158
BamHI	GGATCC	1 cut(s)	772
BanI	GGYRCC	1 cut(s)	1607
BanII	GRGCYC	1 cut(s)	65
BarI	GAAGNNNNNNTAC	4 cut(s)	1227, 1259, 1642, 1674
BauI	CACGAG	1 cut(s)	867
BbsI	GAAGAC	3 cut(s)	1559, 1688, 2009
Bbv12I	GWGCWC	3 cut(s)	104, 1799, 1868
BbvI	GCAGC	3 cut(s)	37, 932, 1937
BccI	CCATC	8 cut(s)	110, 386, 743, 1119, 1123, 1469, 1940, 2129
BceAI	ACGGC	1 cut(s)	1506
BciT130I	CCWGG	1 cut(s)	1220
BcoDI	GTCTC	3 cut(s)	681, 1125, 1371
BcuI	ACTAGT	2 cut(s)	478, 1364
BfaI	CTAG	8 cut(s)	93, 348, 479, 684, 1068, 1124, 1365, 2070
BfmI	CTRYAG	3 cut(s)	435, 946, 1764
BfrI	CTTAAG	1 cut(s)	988
BglII	AGATCT	1 cut(s)	1760
BisI	GCNGC	4 cut(s)	51, 946, 1498, 1951
BlsI	GCNGC	4 cut(s)	52, 947, 1499, 1952
Bme1390I	CCNGG	1 cut(s)	1220
Bme18I	GGWCC	2 cut(s)	243, 1164
BmeRI	GACNNNNNGTC	1 cut(s)	138
BmeT110I	CYCGRG	1 cut(s)	1912
BmgT120I	GGNCC	5 cut(s)	243, 752, 908, 1164, 1519
BmiI	GGNNCC	7 cut(s)	215, 397, 774, 910, 1165, 1166, 1609
BmrFI	CCNGG	1 cut(s)	1220
BmrI	ACTGGG	2 cut(s)	1326, 1948
BmsI	GCATC	7 cut(s)	62, 111, 617, 1320, 1409, 2075, 2188
BmuI	ACTGGG	2 cut(s)	1326, 1948
BpiI	GAAGAC	3 cut(s)	1559, 1688, 2009
BpmI	CTGGAG	1 cut(s)	1755
Bpu10I	CCTNAGC	2 cut(s)	1466, 1639
Bpu14I	TTCGAA	1 cut(s)	1233
BpuEI	CTTGAG	1 cut(s)	2188
Bsa29I	ATCGAT	1 cut(s)	1818
BsaBI	GATNNNNATC	3 cut(s)	364, 1261, 2089
BsaI	GGTCTC	1 cut(s)	681
BsaJI	CCNNGG	4 cut(s)	83, 399, 1159, 1218
BsaXI	ACNNNNNCTCC	6 cut(s)	565, 595, 1728, 1758, 2019, 2049
Bsc4I	CCNNNNNNNGG	9 cut(s)	26, 320, 509, 760, 846, 847, 1049, 1517, 1853
Bse1I	ACTGG	6 cut(s)	31, 514, 1141, 1321, 1536, 1943
Bse3DI	GCAATG	1 cut(s)	1477
Bse8I	GATNNNNATC	3 cut(s)	364, 1261, 2089
BseBI	CCWGG	1 cut(s)	1220
BseCI	ATCGAT	1 cut(s)	1818
BseDI	CCNNGG	4 cut(s)	83, 399, 1159, 1218
BseGI	GGATG	5 cut(s)	121, 126, 1111, 1400, 2140
BseJI	GATNNNNATC	3 cut(s)	364, 1261, 2089
BseLI	CCNNNNNNNGG	9 cut(s)	26, 320, 509, 760, 846, 847, 1049, 1517, 1853
BseMI	GCAATG	1 cut(s)	1477
BseMII	CTCAG	2 cut(s)	27, 2208
BseNI	ACTGG	6 cut(s)	31, 514, 1141, 1321, 1536, 1943
BseRI	GAGGAG	1 cut(s)	157
BseSI	GKGCMC	1 cut(s)	1868
BseXI	GCAGC	3 cut(s)	37, 932, 1937
BseYI	CCCAGC	1 cut(s)	1274
BshFI	GGCC	4 cut(s)	753, 909, 1464, 1521
BshNI	GGYRCC	1 cut(s)	1607
BshVI	ATCGAT	1 cut(s)	1818
BsiHKAI	GWGCWC	3 cut(s)	104, 1799, 1868
BsiHKCI	CYCGRG	1 cut(s)	1912
BslFI	GGGAC	4 cut(s)	145, 1141, 1150, 1828
BslI	CCNNNNNNNGG	9 cut(s)	26, 320, 509, 760, 846, 847, 1049, 1517, 1853
BsmAI	GTCTC	3 cut(s)	681, 1125, 1371
BsmBI	CGTCTC	1 cut(s)	1125
BsmFI	GGGAC	4 cut(s)	145, 1141, 1150, 1828
BsmI	GAATGC	2 cut(s)	889, 1506
BsnI	GGCC	4 cut(s)	753, 909, 1464, 1521
Bso31I	GGTCTC	1 cut(s)	681
BsoBI	CYCGRG	1 cut(s)	1912
Bsp119I	TTCGAA	1 cut(s)	1233
Bsp1286I	GDGCHC	4 cut(s)	65, 104, 1799, 1868
BspACI	CCGC	5 cut(s)	129, 325, 490, 1415, 1498
BspANI	GGCC	4 cut(s)	753, 909, 1464, 1521
BspCNI	CTCAG	2 cut(s)	28, 2207
BspDI	ATCGAT	1 cut(s)	1818
BspLI	GGNNCC	7 cut(s)	215, 397, 774, 910, 1165, 1166, 1609
BspMAI	CTGCAG	2 cut(s)	439, 950
BspPI	GGATC	7 cut(s)	481, 767, 780, 1016, 1209, 2090, 2237
BspQI	GCTCTTC	1 cut(s)	1883
BspT104I	TTCGAA	1 cut(s)	1233
BspT107I	GGYRCC	1 cut(s)	1607
BspTI	CTTAAG	1 cut(s)	988
BspTNI	GGTCTC	1 cut(s)	681
BsrDI	GCAATG	1 cut(s)	1477
BsrI	ACTGG	6 cut(s)	31, 514, 1141, 1321, 1536, 1943
BssECI	CCNNGG	4 cut(s)	83, 399, 1159, 1218
BssNAI	GTATAC	1 cut(s)	1526
BssSI	CACGAG	1 cut(s)	867
BssT1I	CCWWGG	2 cut(s)	399, 1159
Bst1107I	GTATAC	1 cut(s)	1526
Bst2BI	CACGAG	1 cut(s)	867
Bst2UI	CCWGG	1 cut(s)	1220
Bst4CI	ACNGT	6 cut(s)	470, 589, 937, 1248, 1292, 1668
Bst6I	CTCTTC	2 cut(s)	433, 1883
BstAFI	CTTAAG	1 cut(s)	988
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstBI	TTCGAA	1 cut(s)	1233
BstC8I	GCNNGC	3 cut(s)	1502, 1602, 1695
BstDEI	CTNAG	6 cut(s)	36, 1307, 1466, 1538, 1639, 2194
BstEII	GGTNACC	2 cut(s)	539, 1633
BstENI	CCTNNNNNAGG	2 cut(s)	1047, 1851
BstF5I	GGATG	5 cut(s)	121, 126, 1111, 1400, 2140
BstHHI	GCGC	4 cut(s)	1506, 1626, 1935, 2145
BstMAI	GTCTC	3 cut(s)	681, 1125, 1371
BstMWI	GCNNNNNNNGC	2 cut(s)	614, 1503
BstNI	CCWGG	1 cut(s)	1220
BstNSI	RCATGY	3 cut(s)	709, 1600, 1697
BstPI	GGTNACC	2 cut(s)	539, 1633
BstSCI	CCNGG	1 cut(s)	1218
BstSFI	CTRYAG	3 cut(s)	435, 946, 1764
BstSLI	GKGCMC	1 cut(s)	1868
BstV1I	GCAGC	3 cut(s)	37, 932, 1937
BstV2I	GAAGAC	3 cut(s)	1559, 1688, 2009
BstX2I	RGATCY	4 cut(s)	772, 1214, 1760, 2095
BstYI	RGATCY	4 cut(s)	772, 1214, 1760, 2095
BstZ17I	GTATAC	1 cut(s)	1526
Bsu15I	ATCGAT	1 cut(s)	1818
BsuRI	GGCC	4 cut(s)	753, 909, 1464, 1521
BsuTUI	ATCGAT	1 cut(s)	1818
BtsCI	GGATG	5 cut(s)	121, 126, 1111, 1400, 2140
BtsIMutI	CAGTG	4 cut(s)	475, 585, 744, 1314
Cac8I	GCNNGC	3 cut(s)	1502, 1602, 1695
CaiI	CAGNNNCTG	1 cut(s)	2201
CfoI	GCGC	4 cut(s)	1506, 1626, 1935, 2145
Cfr13I	GGNCC	5 cut(s)	243, 752, 908, 1164, 1519
ClaI	ATCGAT	1 cut(s)	1818
Csp6I	GTAC	6 cut(s)	44, 1134, 1304, 1608, 1909, 1976
CviQI	GTAC	6 cut(s)	44, 1134, 1304, 1608, 1909, 1976
DdeI	CTNAG	6 cut(s)	36, 1307, 1466, 1538, 1639, 2194
DraI	TTTAAA	1 cut(s)	931
DriI	GACNNNNNGTC	1 cut(s)	138
Eam1104I	CTCTTC	2 cut(s)	433, 1883
Eam1105I	GACNNNNNGTC	1 cut(s)	138
EarI	CTCTTC	2 cut(s)	433, 1883
EciI	GGCGGA	1 cut(s)	340
Eco130I	CCWWGG	2 cut(s)	399, 1159
Eco147I	AGGCCT	1 cut(s)	1464
Eco24I	GRGCYC	1 cut(s)	65
Eco31I	GGTCTC	1 cut(s)	681
Eco47I	GGWCC	2 cut(s)	243, 1164
Eco57I	CTGAAG	1 cut(s)	1065
Eco88I	CYCGRG	1 cut(s)	1912
Eco91I	GGTNACC	2 cut(s)	539, 1633
EcoNI	CCTNNNNNAGG	2 cut(s)	1047, 1851
EcoO109I	RGGNCCY	1 cut(s)	1164
EcoO65I	GGTNACC	2 cut(s)	539, 1633
EcoRII	CCWGG	1 cut(s)	1218
EcoT14I	CCWWGG	2 cut(s)	399, 1159
EcoT22I	ATGCAT	2 cut(s)	126, 1175
EcoT38I	GRGCYC	1 cut(s)	65
ErhI	CCWWGG	2 cut(s)	399, 1159
Esp3I	CGTCTC	1 cut(s)	1125
FalI	AAGNNNNNCTT	4 cut(s)	1135, 1167, 1622, 1654
FaqI	GGGAC	4 cut(s)	145, 1141, 1150, 1828
FauI	CCCGC	2 cut(s)	122, 1408
FauNDI	CATATG	1 cut(s)	2045
FblI	GTMKAC	2 cut(s)	1525, 1740
Fnu4HI	GCNGC	4 cut(s)	51, 946, 1498, 1951
FokI	GGATG	5 cut(s)	128, 133, 1098, 1387, 2147
FriOI	GRGCYC	1 cut(s)	65
Fsp4HI	GCNGC	4 cut(s)	51, 946, 1498, 1951
FspBI	CTAG	8 cut(s)	93, 348, 479, 684, 1068, 1124, 1365, 2070
FspI	TGCGCA	1 cut(s)	1505
GlaI	GCGC	4 cut(s)	1505, 1625, 1934, 2144
GluI	GCNGC	4 cut(s)	51, 946, 1498, 1951
GsaI	CCCAGC	1 cut(s)	1278
GsuI	CTGGAG	1 cut(s)	1755
HaeIII	GGCC	4 cut(s)	753, 909, 1464, 1521
HhaI	GCGC	4 cut(s)	1506, 1626, 1935, 2145
Hin6I	GCGC	4 cut(s)	1504, 1624, 1933, 2143
HinP1I	GCGC	4 cut(s)	1504, 1624, 1933, 2143
HincII	GTYRAC	1 cut(s)	825
HindII	GTYRAC	1 cut(s)	825
HindIII	AAGCTT	1 cut(s)	1346
HinfI	GANTC	9 cut(s)	224, 365, 731, 1238, 1257, 1284, 1726, 1811, 2148
HphI	GGTGA	6 cut(s)	492, 551, 795, 855, 891, 1627
Hpy166II	GTNNAC	8 cut(s)	424, 466, 825, 1199, 1481, 1526, 1741, 1866
Hpy188III	TCNNGA	7 cut(s)	200, 484, 524, 570, 1025, 1124, 1547
Hpy8I	GTNNAC	8 cut(s)	424, 466, 825, 1199, 1481, 1526, 1741, 1866
Hpy99I	CGWCG	1 cut(s)	1292
HpyAV	CCTTC	9 cut(s)	234, 894, 1096, 1367, 1510, 1624, 1627, 1851, 1921
HpyCH4III	ACNGT	6 cut(s)	470, 589, 937, 1248, 1292, 1668
HpyCH4IV	ACGT	2 cut(s)	1743, 2220
HpyF10VI	GCNNNNNNNGC	2 cut(s)	614, 1503
HpyF3I	CTNAG	6 cut(s)	36, 1307, 1466, 1538, 1639, 2194
HpySE526I	ACGT	2 cut(s)	1743, 2220
HspAI	GCGC	4 cut(s)	1504, 1624, 1933, 2143
KflI	GGGWCCC	1 cut(s)	1164
KpnI	GGTACC	1 cut(s)	1611
LguI	GCTCTTC	1 cut(s)	1883
LmnI	GCTCC	6 cut(s)	170, 401, 645, 694, 1930, 2140
Lsp1109I	GCAGC	3 cut(s)	37, 932, 1937
LweI	GCATC	7 cut(s)	62, 111, 617, 1320, 1409, 2075, 2188
MaeI	CTAG	8 cut(s)	93, 348, 479, 684, 1068, 1124, 1365, 2070
MaeII	ACGT	2 cut(s)	1743, 2220
MaeIII	GTNAC	8 cut(s)	253, 445, 498, 539, 1360, 1489, 1592, 1633
MfeI	CAATTG	1 cut(s)	279
MflI	RGATCY	4 cut(s)	772, 1214, 1760, 2095
MhlI	GDGCHC	4 cut(s)	65, 104, 1799, 1868
MluCI	AATT	9 cut(s)	203, 279, 565, 577, 598, 1073, 1420, 1718, 1782
MmeI	TCCRAC	1 cut(s)	948
Mph1103I	ATGCAT	2 cut(s)	126, 1175
MroXI	GAANNNNTTC	4 cut(s)	379, 577, 1106, 1327
MseI	TTAA	7 cut(s)	441, 534, 930, 989, 1589, 1721, 1896
MslI	CAYNNNNRTG	2 cut(s)	1511, 2196
MspA1I	CMGCKG	3 cut(s)	50, 1604, 1733
MspCI	CTTAAG	1 cut(s)	988
MspR9I	CCNGG	1 cut(s)	1220
MunI	CAATTG	1 cut(s)	279
Mva1269I	GAATGC	2 cut(s)	889, 1506
MvaI	CCWGG	1 cut(s)	1220
MwoI	GCNNNNNNNGC	2 cut(s)	614, 1503
NdeI	CATATG	1 cut(s)	2045
NlaIV	GGNNCC	7 cut(s)	215, 397, 774, 910, 1165, 1166, 1609
NmuCI	GTSAC	5 cut(s)	498, 539, 1489, 1592, 1633
NsbI	TGCGCA	1 cut(s)	1505
NsiI	ATGCAT	2 cut(s)	126, 1175
NspI	RCATGY	3 cut(s)	709, 1600, 1697
NspV	TTCGAA	1 cut(s)	1233
PaeI	GCATGC	1 cut(s)	1697
PceI	AGGCCT	1 cut(s)	1464
PciSI	GCTCTTC	1 cut(s)	1883
PctI	GAATGC	2 cut(s)	889, 1506
PdmI	GAANNNNTTC	4 cut(s)	379, 577, 1106, 1327
PfeI	GAWTC	9 cut(s)	224, 365, 731, 1238, 1257, 1284, 1726, 1811, 2148
PflMI	CCANNNNNTGG	1 cut(s)	509
PkrI	GCNGC	4 cut(s)	52, 947, 1499, 1952
PpuMI	RGGWCCY	1 cut(s)	1164
PsiI	TTATAA	1 cut(s)	627
Psp5II	RGGWCCY	1 cut(s)	1164
Psp6I	CCWGG	1 cut(s)	1218
PspEI	GGTNACC	2 cut(s)	539, 1633
PspFI	CCCAGC	1 cut(s)	1274
PspGI	CCWGG	1 cut(s)	1218
PspN4I	GGNNCC	7 cut(s)	215, 397, 774, 910, 1165, 1166, 1609
PspPI	GGNCC	5 cut(s)	243, 752, 908, 1164, 1519
PspPPI	RGGWCCY	1 cut(s)	1164
PsrI	GAACNNNNNNTAC	2 cut(s)	2210, 2242
PstI	CTGCAG	2 cut(s)	439, 950
PstNI	CAGNNNCTG	1 cut(s)	2201
PsuI	RGATCY	4 cut(s)	772, 1214, 1760, 2095
PvuII	CAGCTG	3 cut(s)	50, 1604, 1733
RsaI	GTAC	6 cut(s)	45, 1135, 1305, 1609, 1910, 1977
RsaNI	GTAC	6 cut(s)	44, 1134, 1304, 1608, 1909, 1976
RseI	CAYNNNNRTG	2 cut(s)	1511, 2196
SapI	GCTCTTC	1 cut(s)	1883
SaqAI	TTAA	7 cut(s)	441, 534, 930, 989, 1589, 1721, 1896
SatI	GCNGC	4 cut(s)	51, 946, 1498, 1951
Sau96I	GGNCC	5 cut(s)	243, 752, 908, 1164, 1519
ScrFI	CCNGG	1 cut(s)	1220
SduI	GDGCHC	4 cut(s)	65, 104, 1799, 1868
SfaNI	GCATC	7 cut(s)	62, 111, 617, 1320, 1409, 2075, 2188
SfcI	CTRYAG	3 cut(s)	435, 946, 1764
SfuI	TTCGAA	1 cut(s)	1233
SinI	GGWCC	2 cut(s)	243, 1164
SmiMI	CAYNNNNRTG	2 cut(s)	1511, 2196
SmlI	CTYRAG	3 cut(s)	12, 988, 2167
SmoI	CTYRAG	3 cut(s)	12, 988, 2167
SpeI	ACTAGT	2 cut(s)	478, 1364
SphI	GCATGC	1 cut(s)	1697
Sse9I	AATT	9 cut(s)	203, 279, 565, 577, 598, 1073, 1420, 1718, 1782
SseBI	AGGCCT	1 cut(s)	1464
SsiI	CCGC	5 cut(s)	129, 325, 490, 1415, 1498
SspI	AATATT	2 cut(s)	331, 855
SspMI	CTAG	8 cut(s)	93, 348, 479, 684, 1068, 1124, 1365, 2070
StuI	AGGCCT	1 cut(s)	1464
StyD4I	CCNGG	1 cut(s)	1218
StyI	CCWWGG	2 cut(s)	399, 1159
TaaI	ACNGT	6 cut(s)	470, 589, 937, 1248, 1292, 1668
TaiI	ACGT	2 cut(s)	1746, 2223
TaqI	TCGA	7 cut(s)	142, 571, 1233, 1255, 1287, 1818, 1988
TasI	AATT	9 cut(s)	203, 279, 565, 577, 598, 1073, 1420, 1718, 1782
TatI	WGTACW	2 cut(s)	1303, 1975
TauI	GCSGC	1 cut(s)	1500
TfiI	GAWTC	9 cut(s)	224, 365, 731, 1238, 1257, 1284, 1726, 1811, 2148
Tru1I	TTAA	7 cut(s)	441, 534, 930, 989, 1589, 1721, 1896
Tru9I	TTAA	7 cut(s)	441, 534, 930, 989, 1589, 1721, 1896
TscAI	CASTG	4 cut(s)	475, 592, 751, 1321
TseFI	GTSAC	5 cut(s)	498, 539, 1489, 1592, 1633
TseI	GCWGC	3 cut(s)	50, 945, 1950
Tsp45I	GTSAC	5 cut(s)	498, 539, 1489, 1592, 1633
TspGWI	ACGGA	3 cut(s)	724, 1730, 2027
TspRI	CASTG	4 cut(s)	475, 592, 751, 1321
Van91I	CCANNNNNTGG	1 cut(s)	509
Vha464I	CTTAAG	1 cut(s)	988
VneI	GTGCAC	1 cut(s)	1864
VpaK11BI	GGWCC	2 cut(s)	243, 1164
XagI	CCTNNNNNAGG	2 cut(s)	1047, 1851
XapI	RAATTY	5 cut(s)	203, 565, 577, 598, 1420
XbaI	TCTAGA	1 cut(s)	1123
XceI	RCATGY	3 cut(s)	709, 1600, 1697
XcmI	CCANNNNNNNNNTGG	1 cut(s)	551
XmiI	GTMKAC	2 cut(s)	1525, 1740
XmnI	GAANNNNTTC	4 cut(s)	379, 577, 1106, 1327
XspI	CTAG	8 cut(s)	93, 348, 479, 684, 1068, 1124, 1365, 2070
Zsp2I	ATGCAT	2 cut(s)	126, 1175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.