Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001019

Physical Location & Seq

Genomic Coordinates Reverse (-)

8683922 .. 8687822

Gene Structure 3901 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG102800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGGGATTGCCTCAAGTGTCTTCTAGCAGTATTGCTGAGGAAGTGGCAGCATCGTTGTGCACTTTTATGCAACCTCCAACCAGAATTGCTGGCGTGAGCAGCTGTGATTTAAGTGGTTTGCATGGCGGAAACATGGGAAATCACATGCAGGTGGATTTGACATGCTCTTCTCCTGGAGAGTTGCAAAGGAAAACCTTGACAGAGATTCCAAATAAGACAGATTTTTCGAATATACGTGTTGGTCGATCAAACATGCATTCCTTGAAGATCAACACCATGGAACAAAATAACTGGTTAAATCTGAAATTAGGTCAGAATATTCAGACATCTGTTCCCAGAATTGTTGGTTTTGAACCAAGAAATTTAAATTCTCCTCTTGATTTGTTTAATGGAAACCGACACTCTTCTAGTGGGGTGGCTGTCACAGATGACACAAATGAGGCCACCGGGTCAGTAGCCAGGAAGCGGTTATCGTCTCCTTTGAATGGAATGCGTCTCCAAGATCAATTTAATGGTGATTCTCTAAACATTGGTGATGGGGTTCATAAGACTTTTGGATGCAAAGATGGCTCTAATATTCCCACATTTCAAGAGCATAAAAAAGCTCACATTGGCAACTCCAATTGTTTCAGTTCTACTACCTGGTCTGCATCTTGTTCCCCAGAGTGGAAGAATTCATTGGATGAGAAGTGTACTACAAACTCCTCCTTTGTAGTTGATGGTCCTTTGCTTGAAACGAAGGAGCCAAAATCACATAATCAGTTCATATCATCATCTGGACTTGATTACTCCCCAGAAACAATAAAGGTAAGGTCACAATCTGGAGCAATAGCCATAAATTCAAGAAAGGTGGCGGTGCATCCACTTTCTTTATCTCCTCTTGGCCCAAAATTTCCTGAAAGAGTGAAATCTGGAGAAGTATGCAGGGATCATACACCGGGGGCAGATGATTACAGTATGACTTTTAAGGACATGGACCATTCACTTGATGGAACTATCCCAGGCATTTCATCGTCTTGGAAAGAGGAGACTTTTAGGGCTCCAAGTAACTCATTGGAAGATGTTGATATTTTGCAGAAAAAGTTTGACCTCTTTAGTCCTGAGAGTCCCAACGGAATGCAACAGCACTGGAGTCAGGATTTGAAATCCAAGTCTGAAGGTGTTAAATTAGCTCGAAGCCTGACTGGACTACCTGTTAGAAGGTCCTTGGTGGGTTCATTTGAGGAATCCCTCTTGTCTGGGCGATTGGTGTCGGCAAAGGTTAATCAGAGAATTGATGGTTTTCTTGCTGTTCTGAATGTTACTGGAGGGAATTTCTCACCAAAATCACAAAAACTTCCATTTTCCGTGACCAGTGTGGATGGAGAGAACTACTTGCTGTATTATTCATCAATAGATCTTGCTGGGAGAAGGACATCAGAAATCTATGGAGGCCCAAAGATGAAGAGAAGCCTTAGCATGGATGATTCACGAGCAGACAGGAACCGTCTAAGAATACCTATGAAAGGCCGTGTACAACTGGTTCTCAGCAATCCAGAAAAGACACCAATTCATACTTTCATCTGTAACTACGATTTGAGTGACATGCCAGCCGGTAGCAAGACATTTTTGCGCCAAAAGATCACTCTAGCCACTTCTGAAGCAACCTTGAAGGCTCAGAATGGAAGACATACAGAGTCTGGTGAAGAAAATGATTCAAATCCATCTTCAATCCTAGACACTGCTAATTCTTTTCAGCTTACCGGCAATGATATAAGAACCTCAAATCAGTGTGTAAAAGGAATTAGTACAGGCGGTTCTGCCTACACCAAGTATGCAGTCGATCAACGCAAAAGAGGGGAGGAAGAATGCATGGTGACCTCTTCTCTTGGTGACTTCAATTCTTTTAGATATGAAAAGACCAATGAGAAGGACAACATGACAATGAGTACATGCCATATCAGTGAAAGCAAGTCTCTGCATAGCCCTTCAAAGCTTAGAAATAATACTACTGGTGCTGGTGTTCTACGTTATGCTCTGCACCTTCGCTTCTTGTGCCATTTTCCTAAGAAATGTTCAAGGTCAGTCCAGAGATGTAAATTAGATCCCTCATCTGGACAAGTGAAAAACAGTTTGGACATTGAAGGGGAGCGGCGCTTCTACTTGTATAATGATTTGAGGGTGGTTTTCCCTCAACGTCAGACGGATTCTGATGAGGGCAAGTTACATGTGGAGTACCATTTTCCTTCAGATCCGAAATACTTCAATATCAGCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chromosome_seg DUF4210

Protein Analysis

752

Amino Acids

83.03

Weight (kDa)

8.63

Isoelectric Point (pI)

51.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chromosome_seg	PF13889	668 - 749	4e-23	Chromosome segregation during meiosis

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001019)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT3G26890 AT5G41110 AT5G41110 AT5G41110
fragaria_vesca	FvH4_3g02970 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_5g09080 FvH4_6g54040 FvH4_6g54040 FvH4_6g54040
malus_domestica	MD06G1134000.v1.1 MD09G1006000.v1.1 MD14G1150300.v1.1 MD17G1010000.v1.1
prunus_persica	Prupe.3G311000_v2.0.a1 Prupe.3G311000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1 Prupe.5G145000_v2.0.a1
pyrus_communis	pycom03g07800 pycom06g12520 pycom111g00440 pycom14g12490 pycom17g00450
rosa_chinensis	RchiOBHm_Chr2g0176221 RchiOBHm_Chr7g0189131
rosa_laevigata	RLG00000004630 RLG00000022392
rosa_multiflora	Rmu_co8469623.1_g000001 Rmu_sc0000405.1_g000014 Rmu_sc0007859.1_g000006
rosa_roxburghii	Rroxscaffold_2G00076670 Rroxscaffold_3G00265760
rosa_rugosa	Rorug02G0591900 Rorug02G0591900 Rorug02G0592000 Rorug06G0496100
rosa_samantha	Rh1DG179700 Rh2AG670500 Rh2BG682000 Rh2CG644800 Rh2DG695600 Rh7AG100900 Rh7BG103500 Rh7CG104900 Rh7DG102800
rosa_wichuraiana	Rw2G055000 Rw7G008710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	139
Acc36I	ACCTGC	1 cut(s)	139
AccBSI	CCGCTC	1 cut(s)	2131
AciI	CCGC	5 cut(s)	126, 466, 854, 1794, 2131
AclWI	GGATC	3 cut(s)	936, 2078, 2225
AcsI	RAATTY	6 cut(s)	361, 367, 673, 838, 890, 1312
AcuI	CTGAAG	3 cut(s)	1176, 1659, 2211
AfaI	GTAC	5 cut(s)	694, 1515, 1789, 1930, 2216
AfiI	CCNNNNNNNGG	6 cut(s)	465, 485, 666, 1459, 1505, 2093
AflIII	ACRYGT	2 cut(s)	235, 2206
AjnI	CCWGG	4 cut(s)	172, 458, 641, 1000
AjuI	GAANNNNNNNTTGG	4 cut(s)	662, 694, 2096, 2128
AluBI	AGCT	5 cut(s)	102, 605, 1172, 1738, 1975
AluI	AGCT	5 cut(s)	102, 605, 1172, 1738, 1975
Alw21I	GWGCWC	1 cut(s)	62
Alw26I	GTCTC	4 cut(s)	480, 500, 1022, 1959
Alw44I	GTGCAC	1 cut(s)	58
AlwI	GGATC	3 cut(s)	936, 2078, 2225
AlwNI	CAGNNNCTG	1 cut(s)	1679
AoxI	GGCC	4 cut(s)	441, 883, 1432, 1507
ApaLI	GTGCAC	1 cut(s)	58
ApeKI	GCWGC	2 cut(s)	47, 99
ApoI	RAATTY	6 cut(s)	361, 367, 673, 838, 890, 1312
ArsI	GACNNNNNNTTYG	2 cut(s)	208, 240
Asp700I	GAANNNNTTC	1 cut(s)	2240
AspLEI	GCGC	2 cut(s)	1614, 2136
AspS9I	GGNCC	5 cut(s)	722, 884, 976, 1203, 1433
AsuC2I	CCSGG	2 cut(s)	448, 939
AsuHPI	GGTGA	6 cut(s)	527, 545, 1311, 1694, 1867, 1883
AsuII	TTCGAA	1 cut(s)	227
AvaII	GGWCC	3 cut(s)	722, 976, 1203
BaeGI	GKGCMC	1 cut(s)	62
BanII	GRGCYC	1 cut(s)	1042
BauI	CACGAG	1 cut(s)	1470
BbsI	GAAGAC	2 cut(s)	12, 1672
Bbv12I	GWGCWC	1 cut(s)	62
BbvCI	CCTCAGC	1 cut(s)	36
BbvI	GCAGC	2 cut(s)	59, 111
BccI	CCATC	7 cut(s)	530, 560, 713, 983, 1271, 1355, 1711
BceAI	ACGGC	1 cut(s)	1494
BciT130I	CCWGG	4 cut(s)	174, 460, 643, 1002
BcnI	CCSGG	2 cut(s)	448, 939
BcoDI	GTCTC	4 cut(s)	480, 500, 1022, 1959
BfaI	CTAG	5 cut(s)	24, 408, 1628, 1715, 2257
BfoI	RGCGCY	1 cut(s)	2137
BfuAI	ACCTGC	1 cut(s)	139
BglII	AGATCT	1 cut(s)	1396
BisI	GCNGC	3 cut(s)	48, 100, 2132
BlsI	GCNGC	3 cut(s)	49, 101, 2133
Bme1390I	CCNGG	6 cut(s)	174, 448, 460, 643, 939, 1002
Bme18I	GGWCC	3 cut(s)	722, 976, 1203
BmgT120I	GGNCC	5 cut(s)	722, 884, 976, 1203, 1433
BmiI	GGNNCC	3 cut(s)	744, 1041, 1484
BmrFI	CCNGG	6 cut(s)	174, 448, 460, 643, 939, 1002
BmsI	GCATC	4 cut(s)	59, 548, 659, 868
BpiI	GAAGAC	2 cut(s)	12, 1672
BpmI	CTGGAG	5 cut(s)	195, 843, 933, 1150, 1326
Bpu10I	CCTNAGC	2 cut(s)	36, 1454
Bpu14I	TTCGAA	1 cut(s)	227
BpuMI	CCSGG	2 cut(s)	448, 939
BsaAI	YACGTR	1 cut(s)	236
BsaBI	GATNNNNATC	1 cut(s)	1698
BsaJI	CCNNGG	4 cut(s)	276, 938, 1000, 1206
Bsc4I	CCNNNNNNNGG	6 cut(s)	465, 485, 666, 1459, 1505, 2093
Bse118I	RCCGGY	2 cut(s)	1592, 1742
Bse1I	ACTGG	7 cut(s)	296, 1133, 1189, 1309, 1353, 1524, 1996
Bse3DI	GCAATG	1 cut(s)	1753
Bse8I	GATNNNNATC	1 cut(s)	1698
BseBI	CCWGG	4 cut(s)	174, 460, 643, 1002
BseDI	CCNNGG	4 cut(s)	276, 938, 1000, 1206
BseGI	GGATG	5 cut(s)	563, 688, 859, 1366, 1468
BseJI	GATNNNNATC	1 cut(s)	1698
BseLI	CCNNNNNNNGG	6 cut(s)	465, 485, 666, 1459, 1505, 2093
BseMI	GCAATG	1 cut(s)	1753
BseMII	CTCAG	4 cut(s)	27, 1092, 1540, 1670
BseNI	ACTGG	7 cut(s)	296, 1133, 1189, 1309, 1353, 1524, 1996
BseRI	GAGGAG	4 cut(s)	363, 694, 867, 1040
BseSI	GKGCMC	1 cut(s)	62
BseXI	GCAGC	2 cut(s)	59, 111
BseYI	CCCAGC	1 cut(s)	1403
BsgI	GTGCAG	1 cut(s)	2003
BshFI	GGCC	4 cut(s)	443, 885, 1434, 1509
BsiHKAI	GWGCWC	1 cut(s)	62
BsiSI	CCGG	4 cut(s)	447, 938, 1593, 1743
BslFI	GGGAC	1 cut(s)	1092
BslI	CCNNNNNNNGG	6 cut(s)	465, 485, 666, 1459, 1505, 2093
BsmAI	GTCTC	4 cut(s)	480, 500, 1022, 1959
BsmBI	CGTCTC	2 cut(s)	480, 500
BsmFI	GGGAC	1 cut(s)	1092
BsmI	GAATGC	4 cut(s)	256, 495, 1122, 1853
BsnI	GGCC	4 cut(s)	443, 885, 1434, 1509
Bsp119I	TTCGAA	1 cut(s)	227
Bsp1286I	GDGCHC	2 cut(s)	62, 1042
Bsp1407I	TGTACA	1 cut(s)	1513
Bsp143I	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
Bsp19I	CCATGG	1 cut(s)	276
BspACI	CCGC	5 cut(s)	126, 466, 854, 1794, 2131
BspANI	GGCC	4 cut(s)	443, 885, 1434, 1509
BspCNI	CTCAG	4 cut(s)	28, 1093, 1539, 1669
BspLI	GGNNCC	3 cut(s)	744, 1041, 1484
BspMI	ACCTGC	1 cut(s)	139
BspPI	GGATC	3 cut(s)	936, 2078, 2225
BspQI	GCTCTTC	1 cut(s)	172
BspT104I	TTCGAA	1 cut(s)	227
BsrBI	CCGCTC	1 cut(s)	2131
BsrDI	GCAATG	1 cut(s)	1753
BsrFI	RCCGGY	2 cut(s)	1592, 1742
BsrGI	TGTACA	1 cut(s)	1513
BsrI	ACTGG	7 cut(s)	296, 1133, 1189, 1309, 1353, 1524, 1996
BssAI	RCCGGY	2 cut(s)	1592, 1742
BssECI	CCNNGG	4 cut(s)	276, 938, 1000, 1206
BssMI	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
BssSI	CACGAG	1 cut(s)	1470
BssT1I	CCWWGG	2 cut(s)	276, 1206
Bst2BI	CACGAG	1 cut(s)	1470
Bst2UI	CCWGG	4 cut(s)	174, 460, 643, 1002
Bst4CI	ACNGT	3 cut(s)	956, 1487, 2111
Bst6I	CTCTTC	4 cut(s)	172, 409, 1439, 1867
BstAUI	TGTACA	1 cut(s)	1513
BstBAI	YACGTR	1 cut(s)	236
BstBI	TTCGAA	1 cut(s)	227
BstC8I	GCNNGC	2 cut(s)	91, 1590
BstDEI	CTNAG	8 cut(s)	36, 1101, 1454, 1490, 1526, 1656, 1976, 2046
BstDSI	CCRYGG	1 cut(s)	276
BstEII	GGTNACC	1 cut(s)	1855
BstENI	CCTNNNNNAGG	1 cut(s)	1503
BstF5I	GGATG	5 cut(s)	563, 688, 859, 1366, 1468
BstH2I	RGCGCY	1 cut(s)	2137
BstHHI	GCGC	2 cut(s)	1614, 2136
BstKTI	GATC	9 cut(s)	248, 270, 505, 931, 1399, 1623, 1825, 2086, 2233
BstMAI	GTCTC	4 cut(s)	480, 500, 1022, 1959
BstMBI	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
BstMWI	GCNNNNNNNGC	3 cut(s)	99, 567, 2034
BstNI	CCWGG	4 cut(s)	174, 460, 643, 1002
BstNSI	RCATGY	6 cut(s)	148, 165, 256, 1588, 1935, 2210
BstPI	GGTNACC	1 cut(s)	1855
BstSCI	CCNGG	6 cut(s)	172, 446, 458, 641, 937, 1000
BstSLI	GKGCMC	1 cut(s)	62
BstV1I	GCAGC	2 cut(s)	59, 111
BstV2I	GAAGAC	2 cut(s)	12, 1672
BstX2I	RGATCY	3 cut(s)	1396, 2083, 2230
BstYI	RGATCY	3 cut(s)	1396, 2083, 2230
BsuRI	GGCC	4 cut(s)	443, 885, 1434, 1509
BtgI	CCRYGG	1 cut(s)	276
BtsCI	GGATG	5 cut(s)	563, 688, 859, 1366, 1468
BtsI	GCAGTG	1 cut(s)	1719
BtsIMutI	CAGTG	5 cut(s)	1126, 1360, 1719, 1775, 1948
BveI	ACCTGC	1 cut(s)	139
Cac8I	GCNNGC	2 cut(s)	91, 1590
CaiI	CAGNNNCTG	1 cut(s)	1679
CfoI	GCGC	2 cut(s)	1614, 2136
Cfr10I	RCCGGY	2 cut(s)	1592, 1742
Cfr13I	GGNCC	5 cut(s)	722, 884, 976, 1203, 1433
CseI	GACGC	1 cut(s)	482
CsiI	ACCWGGT	1 cut(s)	641
Csp6I	GTAC	5 cut(s)	693, 1514, 1788, 1929, 2215
CspCI	CAANNNNNGTGG	2 cut(s)	831, 866
CviQI	GTAC	5 cut(s)	693, 1514, 1788, 1929, 2215
DdeI	CTNAG	8 cut(s)	36, 1101, 1454, 1490, 1526, 1656, 1976, 2046
DpnI	GATC	9 cut(s)	247, 269, 504, 930, 1398, 1622, 1824, 2085, 2232
DpnII	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
DraI	TTTAAA	1 cut(s)	366
Eam1104I	CTCTTC	4 cut(s)	172, 409, 1439, 1867
EarI	CTCTTC	4 cut(s)	172, 409, 1439, 1867
EciI	GGCGGA	1 cut(s)	141
Eco130I	CCWWGG	2 cut(s)	276, 1206
Eco24I	GRGCYC	1 cut(s)	1042
Eco47I	GGWCC	3 cut(s)	722, 976, 1203
Eco57I	CTGAAG	3 cut(s)	1176, 1659, 2211
Eco91I	GGTNACC	1 cut(s)	1855
EcoNI	CCTNNNNNAGG	1 cut(s)	1503
EcoO109I	RGGNCCY	1 cut(s)	1203
EcoO65I	GGTNACC	1 cut(s)	1855
EcoRI	GAATTC	1 cut(s)	673
EcoRII	CCWGG	4 cut(s)	172, 458, 641, 1000
EcoT14I	CCWWGG	2 cut(s)	276, 1206
EcoT22I	ATGCAT	2 cut(s)	258, 1853
EcoT38I	GRGCYC	1 cut(s)	1042
ErhI	CCWWGG	2 cut(s)	276, 1206
Esp3I	CGTCTC	2 cut(s)	480, 500
FaqI	GGGAC	1 cut(s)	1092
Fnu4HI	GCNGC	3 cut(s)	48, 100, 2132
FokI	GGATG	5 cut(s)	570, 695, 846, 1373, 1475
FriOI	GRGCYC	1 cut(s)	1042
Fsp4HI	GCNGC	3 cut(s)	48, 100, 2132
FspBI	CTAG	5 cut(s)	24, 408, 1628, 1715, 2257
GlaI	GCGC	2 cut(s)	1613, 2135
GluI	GCNGC	3 cut(s)	48, 100, 2132
GsaI	CCCAGC	1 cut(s)	1407
GsuI	CTGGAG	5 cut(s)	195, 843, 933, 1150, 1326
HaeII	RGCGCY	1 cut(s)	2137
HaeIII	GGCC	4 cut(s)	443, 885, 1434, 1509
HapII	CCGG	4 cut(s)	447, 938, 1593, 1743
HgaI	GACGC	1 cut(s)	482
HhaI	GCGC	2 cut(s)	1614, 2136
Hin6I	GCGC	2 cut(s)	1612, 2134
HinP1I	GCGC	2 cut(s)	1612, 2134
HindIII	AAGCTT	1 cut(s)	1973
HinfI	GANTC	9 cut(s)	205, 518, 1105, 1132, 1226, 1466, 1676, 1694, 2186
HpaII	CCGG	4 cut(s)	447, 938, 1593, 1743
HphI	GGTGA	6 cut(s)	527, 545, 1311, 1694, 1867, 1883
Hpy166II	GTNNAC	3 cut(s)	60, 693, 1514
Hpy8I	GTNNAC	3 cut(s)	60, 693, 1514
HpyCH4III	ACNGT	3 cut(s)	956, 1487, 2111
HpyCH4IV	ACGT	3 cut(s)	235, 2008, 2176
HpyF10VI	GCNNNNNNNGC	3 cut(s)	99, 567, 2034
HpyF3I	CTNAG	8 cut(s)	36, 1101, 1454, 1490, 1526, 1656, 1976, 2046
HpySE526I	ACGT	3 cut(s)	235, 2008, 2176
HspAI	GCGC	2 cut(s)	1612, 2134
Kzo9I	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
LguI	GCTCTTC	1 cut(s)	172
LmnI	GCTCC	4 cut(s)	742, 824, 1045, 2128
Lsp1109I	GCAGC	2 cut(s)	59, 111
LweI	GCATC	4 cut(s)	59, 548, 659, 868
MabI	ACCWGGT	1 cut(s)	641
MaeI	CTAG	5 cut(s)	24, 408, 1628, 1715, 2257
MaeII	ACGT	3 cut(s)	235, 2008, 2176
MalI	GATC	9 cut(s)	247, 269, 504, 930, 1398, 1622, 1824, 2085, 2232
MbiI	CCGCTC	1 cut(s)	2131
MboI	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
MfeI	CAATTG	1 cut(s)	622
MflI	RGATCY	3 cut(s)	1396, 2083, 2230
MhlI	GDGCHC	2 cut(s)	62, 1042
MlyI	GAGTC	3 cut(s)	1114, 1141, 1685
MmeI	TCCRAC	1 cut(s)	101
Mph1103I	ATGCAT	2 cut(s)	258, 1853
MroXI	GAANNNNTTC	1 cut(s)	2240
MseI	TTAA	8 cut(s)	110, 296, 365, 387, 510, 966, 1164, 1263
MslI	CAYNNNNRTG	5 cut(s)	55, 65, 149, 1922, 1941
MspA1I	CMGCKG	1 cut(s)	102
MspI	CCGG	4 cut(s)	447, 938, 1593, 1743
MspR9I	CCNGG	6 cut(s)	174, 448, 460, 643, 939, 1002
MunI	CAATTG	1 cut(s)	622
Mva1269I	GAATGC	4 cut(s)	256, 495, 1122, 1853
MvaI	CCWGG	4 cut(s)	174, 460, 643, 1002
MwoI	GCNNNNNNNGC	3 cut(s)	99, 567, 2034
NciI	CCSGG	2 cut(s)	448, 939
NcoI	CCATGG	1 cut(s)	276
NdeII	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
NlaIV	GGNNCC	3 cut(s)	744, 1041, 1484
NmuCI	GTSAC	6 cut(s)	421, 813, 1348, 1580, 1855, 1871
NsiI	ATGCAT	2 cut(s)	258, 1853
NspI	RCATGY	6 cut(s)	148, 165, 256, 1588, 1935, 2210
NspV	TTCGAA	1 cut(s)	227
PaqCI	CACCTGC	1 cut(s)	139
PciI	ACATGT	1 cut(s)	2206
PciSI	GCTCTTC	1 cut(s)	172
PcsI	WCGNNNNNNNCGW	1 cut(s)	241
PctI	GAATGC	4 cut(s)	256, 495, 1122, 1853
PdmI	GAANNNNTTC	1 cut(s)	2240
PfeI	GAWTC	6 cut(s)	205, 518, 1226, 1466, 1694, 2186
PfoI	TCCNGGA	1 cut(s)	172
PkrI	GCNGC	3 cut(s)	49, 101, 2133
PleI	GAGTC	3 cut(s)	1113, 1140, 1684
PpsI	GAGTC	3 cut(s)	1113, 1140, 1684
Ppu21I	YACGTR	1 cut(s)	236
PpuMI	RGGWCCY	1 cut(s)	1203
PscI	ACATGT	1 cut(s)	2206
Psp5II	RGGWCCY	1 cut(s)	1203
Psp6I	CCWGG	4 cut(s)	172, 458, 641, 1000
PspEI	GGTNACC	1 cut(s)	1855
PspFI	CCCAGC	1 cut(s)	1403
PspGI	CCWGG	4 cut(s)	172, 458, 641, 1000
PspN4I	GGNNCC	3 cut(s)	744, 1041, 1484
PspPI	GGNCC	5 cut(s)	722, 884, 976, 1203, 1433
PspPPI	RGGWCCY	1 cut(s)	1203
PsrI	GAACNNNNNNTAC	4 cut(s)	1506, 1538, 1780, 1812
PstNI	CAGNNNCTG	1 cut(s)	1679
PsuI	RGATCY	3 cut(s)	1396, 2083, 2230
PvuII	CAGCTG	1 cut(s)	102
RsaI	GTAC	5 cut(s)	694, 1515, 1789, 1930, 2216
RsaNI	GTAC	5 cut(s)	693, 1514, 1788, 1929, 2215
RseI	CAYNNNNRTG	5 cut(s)	55, 65, 149, 1922, 1941
SapI	GCTCTTC	1 cut(s)	172
SaqAI	TTAA	8 cut(s)	110, 296, 365, 387, 510, 966, 1164, 1263
SatI	GCNGC	3 cut(s)	48, 100, 2132
Sau3AI	GATC	9 cut(s)	245, 267, 502, 928, 1396, 1620, 1822, 2083, 2230
Sau96I	GGNCC	5 cut(s)	722, 884, 976, 1203, 1433
SchI	GAGTC	3 cut(s)	1114, 1141, 1685
ScrFI	CCNGG	6 cut(s)	174, 448, 460, 643, 939, 1002
SduI	GDGCHC	2 cut(s)	62, 1042
SexAI	ACCWGGT	1 cut(s)	641
SfaNI	GCATC	4 cut(s)	59, 548, 659, 868
SfuI	TTCGAA	1 cut(s)	227
SinI	GGWCC	3 cut(s)	722, 976, 1203
SmiI	ATTTAAAT	1 cut(s)	366
SmiMI	CAYNNNNRTG	5 cut(s)	55, 65, 149, 1922, 1941
SmlI	CTYRAG	1 cut(s)	12
SmoI	CTYRAG	1 cut(s)	12
SsiI	CCGC	5 cut(s)	126, 466, 854, 1794, 2131
SspI	AATATT	2 cut(s)	319, 577
SspMI	CTAG	5 cut(s)	24, 408, 1628, 1715, 2257
StyD4I	CCNGG	6 cut(s)	172, 446, 458, 641, 937, 1000
StyI	CCWWGG	2 cut(s)	276, 1206
SwaI	ATTTAAAT	1 cut(s)	366
TaaI	ACNGT	3 cut(s)	956, 1487, 2111
TaiI	ACGT	3 cut(s)	238, 2011, 2179
TaqI	TCGA	4 cut(s)	227, 244, 1174, 1821
TatI	WGTACW	4 cut(s)	692, 1513, 1787, 1928
TauI	GCSGC	1 cut(s)	2134
TfiI	GAWTC	6 cut(s)	205, 518, 1226, 1466, 1694, 2186
Tru1I	TTAA	8 cut(s)	110, 296, 365, 387, 510, 966, 1164, 1263
Tru9I	TTAA	8 cut(s)	110, 296, 365, 387, 510, 966, 1164, 1263
TscAI	CASTG	5 cut(s)	1133, 1360, 1726, 1775, 1948
TseFI	GTSAC	6 cut(s)	421, 813, 1348, 1580, 1855, 1871
TseI	GCWGC	2 cut(s)	47, 99
Tsp45I	GTSAC	6 cut(s)	421, 813, 1348, 1580, 1855, 1871
TspGWI	ACGGA	3 cut(s)	1128, 1336, 2198
TspRI	CASTG	5 cut(s)	1133, 1360, 1726, 1775, 1948
VneI	GTGCAC	1 cut(s)	58
VpaK11BI	GGWCC	3 cut(s)	722, 976, 1203
XagI	CCTNNNNNAGG	1 cut(s)	1503
XapI	RAATTY	6 cut(s)	361, 367, 673, 838, 890, 1312
XceI	RCATGY	6 cut(s)	148, 165, 256, 1588, 1935, 2210
XcmI	CCANNNNNNNNNTGG	1 cut(s)	986
XmnI	GAANNNNTTC	1 cut(s)	2240
XspI	CTAG	5 cut(s)	24, 408, 1628, 1715, 2257
Zsp2I	ATGCAT	2 cut(s)	258, 1853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.