Belongs to the Casparian strip membrane proteins (CASP) family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Zip | PF02535 | 50 - 406 | 1.7e-78 | ZIP Zinc transporter |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 440 |
| AccI | GTMKAC | 1 cut(s) | 1092 |
| AccII | CGCG | 3 cut(s) | 137, 335, 617 |
| AclWI | GGATC | 2 cut(s) | 24, 1010 |
| AcoI | YGGCCR | 2 cut(s) | 84, 709 |
| AcsI | RAATTY | 2 cut(s) | 155, 1164 |
| AcuI | CTGAAG | 1 cut(s) | 1074 |
| AcvI | CACGTG | 1 cut(s) | 664 |
| AcyI | GRCGYC | 2 cut(s) | 105, 285 |
| AdeI | CACNNNGTG | 1 cut(s) | 598 |
| AfaI | GTAC | 2 cut(s) | 449, 847 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 215, 386, 643, 933 |
| AgsI | TTSAA | 2 cut(s) | 893, 1163 |
| AjiI | CACGTC | 1 cut(s) | 760 |
| AluBI | AGCT | 3 cut(s) | 1043, 1146, 1196 |
| AluI | AGCT | 3 cut(s) | 1043, 1146, 1196 |
| Alw21I | GWGCWC | 2 cut(s) | 312, 1045 |
| Alw26I | GTCTC | 2 cut(s) | 518, 535 |
| Alw44I | GTGCAC | 1 cut(s) | 308 |
| AlwI | GGATC | 2 cut(s) | 24, 1010 |
| Ama87I | CYCGRG | 1 cut(s) | 515 |
| AoxI | GGCC | 8 cut(s) | 84, 466, 471, 476, 534, 709, 854, 1098 |
| ApaI | GGGCCC | 1 cut(s) | 470 |
| ApaLI | GTGCAC | 1 cut(s) | 308 |
| ApeKI | GCWGC | 6 cut(s) | 249, 866, 912, 947, 1118, 1146 |
| ApoI | RAATTY | 2 cut(s) | 155, 1164 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 272 |
| AspLEI | GCGC | 4 cut(s) | 145, 337, 459, 622 |
| AspS9I | GGNCC | 8 cut(s) | 466, 467, 472, 477, 487, 535, 855, 1108 |
| AsuC2I | CCSGG | 4 cut(s) | 128, 470, 475, 675 |
| AsuHPI | GGTGA | 1 cut(s) | 740 |
| AvaI | CYCGRG | 1 cut(s) | 515 |
| AvaII | GGWCC | 2 cut(s) | 487, 1108 |
| AxyI | CCTNAGG | 1 cut(s) | 642 |
| BaeGI | GKGCMC | 4 cut(s) | 312, 443, 470, 663 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 735, 768 |
| BalI | TGGCCA | 2 cut(s) | 86, 711 |
| BanI | GGYRCC | 1 cut(s) | 440 |
| BanII | GRGCYC | 3 cut(s) | 470, 842, 1045 |
| BbrPI | CACGTG | 1 cut(s) | 664 |
| Bbv12I | GWGCWC | 2 cut(s) | 312, 1045 |
| BbvI | GCAGC | 6 cut(s) | 261, 878, 899, 959, 1105, 1133 |
| BccI | CCATC | 4 cut(s) | 173, 397, 633, 888 |
| BceAI | ACGGC | 2 cut(s) | 262, 736 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 238, 272, 1192, 1226 |
| BciVI | GTATCC | 1 cut(s) | 736 |
| BclI | TGATCA | 1 cut(s) | 807 |
| BcnI | CCSGG | 4 cut(s) | 128, 470, 475, 675 |
| BcoDI | GTCTC | 2 cut(s) | 518, 535 |
| BfaI | CTAG | 1 cut(s) | 986 |
| BfmI | CTRYAG | 1 cut(s) | 945 |
| BfoI | RGCGCY | 1 cut(s) | 146 |
| BfuI | GTATCC | 1 cut(s) | 736 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 404, 617 |
| BmcAI | AGTACT | 1 cut(s) | 449 |
| Bme1390I | CCNGG | 4 cut(s) | 128, 470, 475, 675 |
| Bme18I | GGWCC | 2 cut(s) | 487, 1108 |
| BmeT110I | CYCGRG | 1 cut(s) | 515 |
| BmgBI | CACGTC | 1 cut(s) | 760 |
| BmgT120I | GGNCC | 8 cut(s) | 466, 467, 472, 477, 487, 535, 855, 1108 |
| BmiI | GGNNCC | 4 cut(s) | 328, 442, 468, 938 |
| BmrFI | CCNGG | 4 cut(s) | 128, 470, 475, 675 |
| BmrI | ACTGGG | 2 cut(s) | 439, 833 |
| BmsI | GCATC | 3 cut(s) | 416, 579, 1068 |
| BmuI | ACTGGG | 2 cut(s) | 439, 833 |
| BpuMI | CCSGG | 4 cut(s) | 128, 470, 475, 675 |
| BsaAI | YACGTR | 1 cut(s) | 664 |
| BsaHI | GRCGYC | 2 cut(s) | 105, 285 |
| BsaI | GGTCTC | 1 cut(s) | 518 |
| BsaJI | CCNNGG | 6 cut(s) | 81, 365, 483, 700, 718, 1101 |
| BsaWI | WCCGGW | 2 cut(s) | 225, 299 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 302, 332, 1032, 1062 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 215, 386, 643, 933 |
| Bse118I | RCCGGY | 1 cut(s) | 281 |
| Bse1I | ACTGG | 3 cut(s) | 445, 751, 828 |
| Bse21I | CCTNAGG | 1 cut(s) | 642 |
| BseDI | CCNNGG | 6 cut(s) | 81, 365, 483, 700, 718, 1101 |
| BseGI | GGATG | 3 cut(s) | 594, 1016, 1146 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 215, 386, 643, 933 |
| BseMII | CTCAG | 2 cut(s) | 656, 1121 |
| BseNI | ACTGG | 3 cut(s) | 445, 751, 828 |
| BseRI | GAGGAG | 1 cut(s) | 170 |
| BseSI | GKGCMC | 4 cut(s) | 312, 443, 470, 663 |
| BseXI | GCAGC | 6 cut(s) | 261, 878, 899, 959, 1105, 1133 |
| BseYI | CCCAGC | 1 cut(s) | 1196 |
| BsgI | GTGCAG | 1 cut(s) | 1056 |
| Bsh1236I | CGCG | 3 cut(s) | 137, 335, 617 |
| Bsh1285I | CGRYCG | 1 cut(s) | 583 |
| BshFI | GGCC | 8 cut(s) | 86, 468, 473, 478, 536, 711, 856, 1100 |
| BshNI | GGYRCC | 1 cut(s) | 440 |
| BsiEI | CGRYCG | 1 cut(s) | 583 |
| BsiHKAI | GWGCWC | 2 cut(s) | 312, 1045 |
| BsiHKCI | CYCGRG | 1 cut(s) | 515 |
| BslFI | GGGAC | 1 cut(s) | 143 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 215, 386, 643, 933 |
| BsmAI | GTCTC | 2 cut(s) | 518, 535 |
| BsmFI | GGGAC | 1 cut(s) | 143 |
| BsmI | GAATGC | 1 cut(s) | 609 |
| BsnI | GGCC | 8 cut(s) | 86, 468, 473, 478, 536, 711, 856, 1100 |
| Bso31I | GGTCTC | 1 cut(s) | 518 |
| BsoBI | CYCGRG | 1 cut(s) | 515 |
| Bsp120I | GGGCCC | 1 cut(s) | 466 |
| Bsp1286I | GDGCHC | 6 cut(s) | 312, 443, 470, 663, 842, 1045 |
| Bsp143I | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| Bsp19I | CCATGG | 2 cut(s) | 81, 365 |
| BspANI | GGCC | 8 cut(s) | 86, 468, 473, 478, 536, 711, 856, 1100 |
| BspCNI | CTCAG | 2 cut(s) | 655, 1122 |
| BspFNI | CGCG | 3 cut(s) | 137, 335, 617 |
| BspLI | GGNNCC | 4 cut(s) | 328, 442, 468, 938 |
| BspMAI | CTGCAG | 1 cut(s) | 949 |
| BspPI | GGATC | 2 cut(s) | 24, 1010 |
| BspQI | GCTCTTC | 1 cut(s) | 32 |
| BspT107I | GGYRCC | 1 cut(s) | 440 |
| BspTNI | GGTCTC | 1 cut(s) | 518 |
| BsrFI | RCCGGY | 1 cut(s) | 281 |
| BsrI | ACTGG | 3 cut(s) | 445, 751, 828 |
| BssAI | RCCGGY | 1 cut(s) | 281 |
| BssECI | CCNNGG | 6 cut(s) | 81, 365, 483, 700, 718, 1101 |
| BssMI | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| BssNI | GRCGYC | 2 cut(s) | 105, 285 |
| BssT1I | CCWWGG | 3 cut(s) | 81, 365, 1101 |
| Bst4CI | ACNGT | 4 cut(s) | 78, 512, 873, 1034 |
| Bst6I | CTCTTC | 3 cut(s) | 32, 260, 564 |
| BstACI | GRCGYC | 2 cut(s) | 105, 285 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 413 |
| BstBAI | YACGTR | 1 cut(s) | 664 |
| BstC8I | GCNNGC | 7 cut(s) | 100, 283, 353, 414, 609, 1181, 1215 |
| BstDEI | CTNAG | 4 cut(s) | 642, 859, 1130, 1227 |
| BstDSI | CCRYGG | 4 cut(s) | 81, 365, 700, 718 |
| BstF5I | GGATG | 3 cut(s) | 594, 1016, 1146 |
| BstFNI | CGCG | 3 cut(s) | 137, 335, 617 |
| BstH2I | RGCGCY | 1 cut(s) | 146 |
| BstHHI | GCGC | 4 cut(s) | 145, 337, 459, 622 |
| BstKTI | GATC | 5 cut(s) | 19, 195, 810, 944, 1005 |
| BstMAI | GTCTC | 2 cut(s) | 518, 535 |
| BstMBI | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| BstMCI | CGRYCG | 1 cut(s) | 583 |
| BstNSI | RCATGY | 3 cut(s) | 316, 611, 654 |
| BstSCI | CCNGG | 4 cut(s) | 126, 468, 473, 673 |
| BstSFI | CTRYAG | 1 cut(s) | 945 |
| BstSLI | GKGCMC | 4 cut(s) | 312, 443, 470, 663 |
| BstUI | CGCG | 3 cut(s) | 137, 335, 617 |
| BstV1I | GCAGC | 6 cut(s) | 261, 878, 899, 959, 1105, 1133 |
| BstX2I | RGATCY | 1 cut(s) | 16 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 211, 707 |
| BstYI | RGATCY | 1 cut(s) | 16 |
| Bsu36I | CCTNAGG | 1 cut(s) | 642 |
| BsuI | GTATCC | 1 cut(s) | 736 |
| BsuRI | GGCC | 8 cut(s) | 86, 468, 473, 478, 536, 711, 856, 1100 |
| BtgI | CCRYGG | 4 cut(s) | 81, 365, 700, 718 |
| BtgZI | GCGATG | 2 cut(s) | 151, 393 |
| BtrI | CACGTC | 1 cut(s) | 760 |
| BtsCI | GGATG | 3 cut(s) | 594, 1016, 1146 |
| BtsIMutI | CAGTG | 4 cut(s) | 821, 869, 1039, 1050 |
| Cac8I | GCNNGC | 7 cut(s) | 100, 283, 353, 414, 609, 1181, 1215 |
| CfoI | GCGC | 4 cut(s) | 145, 337, 459, 622 |
| Cfr10I | RCCGGY | 1 cut(s) | 281 |
| Cfr13I | GGNCC | 8 cut(s) | 466, 467, 472, 477, 487, 535, 855, 1108 |
| CseI | GACGC | 5 cut(s) | 113, 143, 274, 341, 656 |
| Csp6I | GTAC | 2 cut(s) | 448, 846 |
| CviQI | GTAC | 2 cut(s) | 448, 846 |
| DdeI | CTNAG | 4 cut(s) | 642, 859, 1130, 1227 |
| DpnI | GATC | 5 cut(s) | 18, 194, 809, 943, 1004 |
| DpnII | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| DraIII | CACNNNGTG | 1 cut(s) | 598 |
| EaeI | YGGCCR | 2 cut(s) | 84, 709 |
| Eam1104I | CTCTTC | 3 cut(s) | 32, 260, 564 |
| EarI | CTCTTC | 3 cut(s) | 32, 260, 564 |
| EciI | GGCGGA | 2 cut(s) | 82, 743 |
| Ecl136II | GAGCTC | 1 cut(s) | 1043 |
| Eco130I | CCWWGG | 3 cut(s) | 81, 365, 1101 |
| Eco24I | GRGCYC | 3 cut(s) | 470, 842, 1045 |
| Eco31I | GGTCTC | 1 cut(s) | 518 |
| Eco47I | GGWCC | 2 cut(s) | 487, 1108 |
| Eco53kI | GAGCTC | 1 cut(s) | 1043 |
| Eco57I | CTGAAG | 1 cut(s) | 1074 |
| Eco72I | CACGTG | 1 cut(s) | 664 |
| Eco81I | CCTNAGG | 1 cut(s) | 642 |
| Eco88I | CYCGRG | 1 cut(s) | 515 |
| EcoICRI | GAGCTC | 1 cut(s) | 1043 |
| EcoO109I | RGGNCCY | 2 cut(s) | 466, 855 |
| EcoT14I | CCWWGG | 3 cut(s) | 81, 365, 1101 |
| EcoT22I | ATGCAT | 1 cut(s) | 609 |
| EcoT38I | GRGCYC | 3 cut(s) | 470, 842, 1045 |
| ErhI | CCWWGG | 3 cut(s) | 81, 365, 1101 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 365, 397 |
| FaqI | GGGAC | 1 cut(s) | 143 |
| FbaI | TGATCA | 1 cut(s) | 807 |
| FblI | GTMKAC | 1 cut(s) | 1092 |
| FokI | GGATG | 3 cut(s) | 601, 1003, 1153 |
| FriOI | GRGCYC | 3 cut(s) | 470, 842, 1045 |
| FspBI | CTAG | 1 cut(s) | 986 |
| GlaI | GCGC | 4 cut(s) | 144, 336, 458, 621 |
| GsaI | CCCAGC | 1 cut(s) | 1200 |
| HaeII | RGCGCY | 1 cut(s) | 146 |
| HaeIII | GGCC | 8 cut(s) | 86, 468, 473, 478, 536, 711, 856, 1100 |
| HgaI | GACGC | 5 cut(s) | 113, 143, 274, 341, 656 |
| HhaI | GCGC | 4 cut(s) | 145, 337, 459, 622 |
| Hin1I | GRCGYC | 2 cut(s) | 105, 285 |
| Hin6I | GCGC | 4 cut(s) | 143, 335, 457, 620 |
| HinP1I | GCGC | 4 cut(s) | 143, 335, 457, 620 |
| HincII | GTYRAC | 1 cut(s) | 430 |
| HindII | GTYRAC | 1 cut(s) | 430 |
| HphI | GGTGA | 1 cut(s) | 740 |
| Hpy166II | GTNNAC | 4 cut(s) | 310, 430, 1093, 1108 |
| Hpy188I | TCNGA | 7 cut(s) | 64, 118, 197, 263, 331, 508, 1131 |
| Hpy188III | TCNNGA | 7 cut(s) | 14, 41, 217, 387, 515, 644, 934 |
| Hpy8I | GTNNAC | 4 cut(s) | 310, 430, 1093, 1108 |
| Hpy99I | CGWCG | 7 cut(s) | 107, 137, 164, 263, 335, 764, 767 |
| HpyAV | CCTTC | 8 cut(s) | 20, 79, 283, 391, 569, 886, 887, 1049 |
| HpyCH4III | ACNGT | 4 cut(s) | 78, 512, 873, 1034 |
| HpyCH4IV | ACGT | 2 cut(s) | 663, 759 |
| HpyF3I | CTNAG | 4 cut(s) | 642, 859, 1130, 1227 |
| HpySE526I | ACGT | 2 cut(s) | 663, 759 |
| Hsp92I | GRCGYC | 2 cut(s) | 105, 285 |
| HspAI | GCGC | 4 cut(s) | 143, 335, 457, 620 |
| KroI | GCCGGC | 1 cut(s) | 281 |
| KroNI | GCCGGC | 1 cut(s) | 283 |
| Ksp22I | TGATCA | 1 cut(s) | 807 |
| Kzo9I | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| LguI | GCTCTTC | 1 cut(s) | 32 |
| LmnI | GCTCC | 3 cut(s) | 263, 1040, 1193 |
| Lsp1109I | GCAGC | 6 cut(s) | 261, 878, 899, 959, 1105, 1133 |
| LweI | GCATC | 3 cut(s) | 416, 579, 1068 |
| MaeI | CTAG | 1 cut(s) | 986 |
| MaeII | ACGT | 2 cut(s) | 663, 759 |
| MaeIII | GTNAC | 6 cut(s) | 653, 664, 692, 819, 831, 1048 |
| MalI | GATC | 5 cut(s) | 18, 194, 809, 943, 1004 |
| MboI | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| MboII | GAAGA | 6 cut(s) | 19, 232, 247, 385, 581, 1005 |
| MflI | RGATCY | 1 cut(s) | 16 |
| MhlI | GDGCHC | 6 cut(s) | 312, 443, 470, 663, 842, 1045 |
| MlsI | TGGCCA | 2 cut(s) | 86, 711 |
| MluCI | AATT | 8 cut(s) | 155, 198, 929, 1008, 1113, 1150, 1164, 1218 |
| MluNI | TGGCCA | 2 cut(s) | 86, 711 |
| MlyI | GAGTC | 4 cut(s) | 59, 122, 507, 527 |
| MmeI | TCCRAC | 5 cut(s) | 73, 96, 241, 354, 486 |
| Mox20I | TGGCCA | 2 cut(s) | 86, 711 |
| Mph1103I | ATGCAT | 1 cut(s) | 609 |
| MreI | CGCCGGCG | 1 cut(s) | 281 |
| MroNI | GCCGGC | 1 cut(s) | 281 |
| MroXI | GAANNNNTTC | 1 cut(s) | 272 |
| MscI | TGGCCA | 2 cut(s) | 86, 711 |
| MseI | TTAA | 1 cut(s) | 339 |
| MslI | CAYNNNNRTG | 1 cut(s) | 705 |
| Msp20I | TGGCCA | 2 cut(s) | 86, 711 |
| MspR9I | CCNGG | 4 cut(s) | 128, 470, 475, 675 |
| Mva1269I | GAATGC | 1 cut(s) | 609 |
| MvnI | CGCG | 3 cut(s) | 137, 335, 617 |
| NaeI | GCCGGC | 1 cut(s) | 283 |
| NciI | CCSGG | 4 cut(s) | 128, 470, 475, 675 |
| NcoI | CCATGG | 2 cut(s) | 81, 365 |
| NdeII | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| NgoMIV | GCCGGC | 1 cut(s) | 281 |
| NlaIV | GGNNCC | 4 cut(s) | 328, 442, 468, 938 |
| NmeAIII | GCCGAG | 2 cut(s) | 136, 512 |
| NmuCI | GTSAC | 6 cut(s) | 653, 664, 692, 819, 831, 1048 |
| NsiI | ATGCAT | 1 cut(s) | 609 |
| NspI | RCATGY | 3 cut(s) | 316, 611, 654 |
| PaeI | GCATGC | 1 cut(s) | 611 |
| PaeR7I | CTCGAG | 1 cut(s) | 515 |
| PciSI | GCTCTTC | 1 cut(s) | 32 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 282, 432, 554 |
| PctI | GAATGC | 1 cut(s) | 609 |
| PdiI | GCCGGC | 1 cut(s) | 283 |
| PdmI | GAANNNNTTC | 1 cut(s) | 272 |
| PfeI | GAWTC | 6 cut(s) | 119, 303, 390, 545, 686, 1067 |
| PleI | GAGTC | 4 cut(s) | 59, 121, 506, 526 |
| PmaCI | CACGTG | 1 cut(s) | 664 |
| PmlI | CACGTG | 1 cut(s) | 664 |
| PpsI | GAGTC | 4 cut(s) | 59, 121, 506, 526 |
| Ppu21I | YACGTR | 1 cut(s) | 664 |
| Psp124BI | GAGCTC | 1 cut(s) | 1045 |
| PspCI | CACGTG | 1 cut(s) | 664 |
| PspFI | CCCAGC | 1 cut(s) | 1196 |
| PspN4I | GGNNCC | 4 cut(s) | 328, 442, 468, 938 |
| PspOMI | GGGCCC | 1 cut(s) | 466 |
| PspPI | GGNCC | 8 cut(s) | 466, 467, 472, 477, 487, 535, 855, 1108 |
| PstI | CTGCAG | 1 cut(s) | 949 |
| PsuI | RGATCY | 1 cut(s) | 16 |
| RsaI | GTAC | 2 cut(s) | 449, 847 |
| RsaNI | GTAC | 2 cut(s) | 448, 846 |
| RseI | CAYNNNNRTG | 1 cut(s) | 705 |
| SacI | GAGCTC | 1 cut(s) | 1045 |
| SapI | GCTCTTC | 1 cut(s) | 32 |
| SaqAI | TTAA | 1 cut(s) | 339 |
| Sau3AI | GATC | 5 cut(s) | 16, 192, 807, 941, 1002 |
| Sau96I | GGNCC | 8 cut(s) | 466, 467, 472, 477, 487, 535, 855, 1108 |
| ScaI | AGTACT | 1 cut(s) | 449 |
| SchI | GAGTC | 4 cut(s) | 59, 122, 507, 527 |
| ScrFI | CCNGG | 4 cut(s) | 128, 470, 475, 675 |
| SduI | GDGCHC | 6 cut(s) | 312, 443, 470, 663, 842, 1045 |
| SfaNI | GCATC | 3 cut(s) | 416, 579, 1068 |
| SfcI | CTRYAG | 1 cut(s) | 945 |
| Sfr274I | CTCGAG | 1 cut(s) | 515 |
| SgrAI | CRCCGGYG | 1 cut(s) | 281 |
| SinI | GGWCC | 2 cut(s) | 487, 1108 |
| SlaI | CTCGAG | 1 cut(s) | 515 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 705 |
| SmlI | CTYRAG | 1 cut(s) | 515 |
| SmoI | CTYRAG | 1 cut(s) | 515 |
| SphI | GCATGC | 1 cut(s) | 611 |
| Sse9I | AATT | 8 cut(s) | 155, 198, 929, 1008, 1113, 1150, 1164, 1218 |
| SspMI | CTAG | 1 cut(s) | 986 |
| SstI | GAGCTC | 1 cut(s) | 1045 |
| StyD4I | CCNGG | 4 cut(s) | 126, 468, 473, 673 |
| StyI | CCWWGG | 3 cut(s) | 81, 365, 1101 |
| TaaI | ACNGT | 4 cut(s) | 78, 512, 873, 1034 |
| TaiI | ACGT | 2 cut(s) | 666, 762 |
| TaqI | TCGA | 6 cut(s) | 371, 496, 516, 548, 628, 1202 |
| TaqII | GACCGA | 1 cut(s) | 683 |
| TasI | AATT | 8 cut(s) | 155, 198, 929, 1008, 1113, 1150, 1164, 1218 |
| TatI | WGTACW | 1 cut(s) | 447 |
| TauI | GCSGC | 4 cut(s) | 98, 110, 281, 620 |
| TfiI | GAWTC | 6 cut(s) | 119, 303, 390, 545, 686, 1067 |
| Tru1I | TTAA | 1 cut(s) | 339 |
| Tru9I | TTAA | 1 cut(s) | 339 |
| TscAI | CASTG | 4 cut(s) | 828, 876, 1039, 1057 |
| TseFI | GTSAC | 6 cut(s) | 653, 664, 692, 819, 831, 1048 |
| TseI | GCWGC | 6 cut(s) | 249, 866, 912, 947, 1118, 1146 |
| Tsp45I | GTSAC | 6 cut(s) | 653, 664, 692, 819, 831, 1048 |
| TspDTI | ATGAA | 1 cut(s) | 1005 |
| TspGWI | ACGGA | 1 cut(s) | 257 |
| TspRI | CASTG | 4 cut(s) | 828, 876, 1039, 1057 |
| VneI | GTGCAC | 1 cut(s) | 308 |
| VpaK11BI | GGWCC | 2 cut(s) | 487, 1108 |
| XapI | RAATTY | 2 cut(s) | 155, 1164 |
| XceI | RCATGY | 3 cut(s) | 316, 611, 654 |
| XhoI | CTCGAG | 1 cut(s) | 515 |
| XmiI | GTMKAC | 1 cut(s) | 1092 |
| XmnI | GAANNNNTTC | 1 cut(s) | 272 |
| XspI | CTAG | 1 cut(s) | 986 |
| ZrmI | AGTACT | 1 cut(s) | 449 |
| Zsp2I | ATGCAT | 1 cut(s) | 609 |