Prupe.4G019100_v2.0.a1

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
878094 .. 880303
2210 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G019100.1

Sequence Viewer

Length: 1611 bp
ATGGCAATCACTAACCTCTCACTTTCAACCATCTACTTCTGCTTCTTCTTTATCTCCACTTTACTCTTCACAGCGTCTCAAGCTACCTCTTCTTCACCCATTTTGACAACCACAAAGCAGCAGCAAAATCAAGACCAAGACAAAGAGCCATTCGTGGGAGTGAACATAGGCACAGACGTTTCGAATCTTCTATCTCCCTCAGACCTCGTTTCGTTCCTCCAAGTCCAGCAGATCAACCACATACGCCTCTACGATGCGGACCCTGACATTCTCAAAGCCTTGGCCAAAACCAAGATCCGAGTCATTATCAGTGTCCCCAATAATCAGATTCTCGCCATTGGGTCCTCCAACACCACTGCTGCTTCTTGGGTCGGTCGAAACGTCGTCGCATACTACCCAGAAACGCTCATAACAGGCATTGCGGTTGGCGATGAGGTCCTGACCACAGTGCCCTCTTCAGCTCCTCTGCTTCTTCCAGCAATTCAGTCGCTTTACACTGCTTTAGTGGCTGCAAATTTGCATACCCATGTCAAGATTTCTACTCCTCACGCCGCCTCGATAATTCTTGATCCGTTTCCACCATCTCAGGCTTTCTTCAACCAAAGCTGGACGCAAATTGTGCTTCCATTGCTTCAGTTCTTGTCCAAGACAGGGTCGCCTCTGATGATGAATCTTTACCCTTACTACGTGTTTATGCAGAACAAAGGTGTGGTGCCTCTTGACAATGCCCTTTTCAAGCCTTTAACACCCTCCAAAGAAATGGTGGATCCCAATACTTTGCTTCACTATACCAATGTGTTAGATGCTATGATTGATGCTGCTTATTTTTCCATGAAGAACCTCAATATCACTGATGTTGTGGTTCTTGTTACTGAGAGTGGTTGGCCTTCAAAGGCTGATTCTAAAGAGCCTTTTGCTACTATTGACAATGCGGATACATACAATTCCAATCTTATTAAGCATGTTTTTGATCGTAGTGGCACCCCTTTGCACCCTGAGACCACTTCAAGTGTGTACATTTATGAATTGTTCAACGAAGATTTAAGGTCTCCTCCGGTATCCGAGGCCAATTGGGGCTTGTTTTATGGGAATTCGAGTGCGGTGTATTTGCTACATGTATCAGGAAGTGGGTCTTTTTTGGCTAATGATACAACAAACCAGACCTATTGCATTGCCATGGATGGAGTAGACTCAAAGATTTTGCAGGCGGCATTGGATTGGGCATGTGGACCGGGGCGATCCAATTGCTCAGAGATCCAGCCAGGGCAGGATTGTTACTCTCCCAATAATGTGAAAAGCCATGCTTCATATGCGTTTGATAGCTATTACCAGAAGGAAGGGCGGGCTGCTGGGTCTTGTGATTTCAAGGGTGTAGCCACCATTACCACCACAGACCCAAGTCACGGGAGCTGTATATTTCCTGGAAGTAAGAAGGTGATCAATAAAACAAGGCAGGTGGTGAACTCGACCCATTCAAGTAGTGGAGCAGACAGATTAAGATTCATTGCCTTGAGCAGCAACAGAATAAGTGCCATCAGTGGGATATTATCTGTATTTTTTCGTGTAATTTTCTCTACTTTGTTATTCATTCCTTTTATGACTCCTTGCTGA

Protein Analysis

537

Amino Acids

58.48

Weight (kDa)

5.87

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1444
Acc36I ACCTGC 1 cut(s) 1444
AccB1I GGYRCC 2 cut(s) 712, 980
AccI GTMKAC 1 cut(s) 1188
AciI CCGC 7 cut(s) 257, 422, 552, 932, 1100, 1208, 1342
AclWI GGATC 6 cut(s) 289, 563, 761, 774, 1233, 1249
AcoI YGGCCR 1 cut(s) 282
AcsI RAATTY 2 cut(s) 514, 1090
AcuI CTGAAG 2 cut(s) 441, 617
AfaI GTAC 1 cut(s) 1016
AfiI CCNNNNNNNGG 4 cut(s) 155, 651, 1403, 1539
AflIII ACRYGT 2 cut(s) 687, 1114
AgsI TTSAA 8 cut(s) 27, 598, 736, 891, 1008, 1033, 1366, 1476
AjnI CCWGG 2 cut(s) 1261, 1420
AluBI AGCT 5 cut(s) 83, 461, 606, 1323, 1410
AluI AGCT 5 cut(s) 83, 461, 606, 1323, 1410
Alw26I GTCTC 3 cut(s) 81, 992, 1053
AlwI GGATC 6 cut(s) 289, 563, 761, 774, 1233, 1249
AoxI GGCC 3 cut(s) 282, 884, 1065
ApeKI GCWGC 7 cut(s) 118, 121, 359, 509, 818, 1346, 1515
ApoI RAATTY 2 cut(s) 514, 1090
AspS9I GGNCC 4 cut(s) 259, 342, 436, 1229
AsuC2I CCSGG 1 cut(s) 1233
AsuHPI GGTGA 3 cut(s) 87, 1447, 1471
AsuII TTCGAA 1 cut(s) 182
AvaII GGWCC 4 cut(s) 259, 342, 436, 1229
BaeGI GKGCMC 1 cut(s) 453
BalI TGGCCA 1 cut(s) 284
BamHI GGATCC 1 cut(s) 766
BanI GGYRCC 2 cut(s) 712, 980
BbvI GCAGC 7 cut(s) 130, 133, 346, 496, 805, 1333, 1527
BccI CCATC 4 cut(s) 38, 589, 1175, 1541
BcgI CGANNNNNNTGC 4 cut(s) 468, 502, 1227, 1261
BciT130I CCWGG 2 cut(s) 1263, 1422
BciVI GTATCC 2 cut(s) 928, 1069
BclI TGATCA 1 cut(s) 1437
BcnI CCSGG 1 cut(s) 1233
BcoDI GTCTC 3 cut(s) 81, 992, 1053
BfuAI ACCTGC 1 cut(s) 1444
BfuI GTATCC 2 cut(s) 928, 1069
BisI GCNGC 9 cut(s) 119, 122, 360, 510, 552, 819, 1209, 1347, 1516
BlsI GCNGC 9 cut(s) 120, 123, 361, 511, 553, 820, 1210, 1348, 1517
Bme1390I CCNGG 3 cut(s) 1233, 1263, 1422
Bme18I GGWCC 4 cut(s) 259, 342, 436, 1229
BmgT120I GGNCC 4 cut(s) 259, 342, 436, 1229
BmiI GGNNCC 5 cut(s) 261, 343, 714, 768, 982
BmrFI CCNGG 3 cut(s) 1233, 1263, 1422
BmsI GCATC 3 cut(s) 244, 793, 805
BoxI GACNNNNGTC 1 cut(s) 1398
Bpu14I TTCGAA 1 cut(s) 182
BpuEI CTTGAG 2 cut(s) 63, 1531
BpuMI CCSGG 1 cut(s) 1233
BsaAI YACGTR 1 cut(s) 688
BsaI GGTCTC 2 cut(s) 992, 1053
BsaJI CCNNGG 5 cut(s) 279, 1062, 1176, 1232, 1262
BsaWI WCCGGW 1 cut(s) 1054
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 651, 1403, 1539
Bse3DI GCAATG 4 cut(s) 417, 626, 1170, 1503
BseBI CCWGG 2 cut(s) 1263, 1422
BseDI CCNNGG 5 cut(s) 279, 1062, 1176, 1232, 1262
BseGI GGATG 1 cut(s) 1186
BseLI CCNNNNNNNGG 4 cut(s) 155, 651, 1403, 1539
BseMI GCAATG 4 cut(s) 417, 626, 1170, 1503
BseMII CTCAG 5 cut(s) 213, 599, 864, 987, 1263
BseRI GAGGAG 3 cut(s) 453, 534, 1041
BseSI GKGCMC 1 cut(s) 453
BseXI GCAGC 7 cut(s) 130, 133, 346, 496, 805, 1333, 1527
BseYI CCCAGC 1 cut(s) 1349
Bsh1285I CGRYCG 1 cut(s) 376
BshFI GGCC 3 cut(s) 284, 886, 1067
BshNI GGYRCC 2 cut(s) 712, 980
BsiEI CGRYCG 1 cut(s) 376
BsiSI CCGG 2 cut(s) 1055, 1232
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 4 cut(s) 155, 651, 1403, 1539
BsmAI GTCTC 3 cut(s) 81, 992, 1053
BsmBI CGTCTC 1 cut(s) 81
BsmFI GGGAC 1 cut(s) 299
BsnI GGCC 3 cut(s) 284, 886, 1067
Bso31I GGTCTC 2 cut(s) 992, 1053
Bsp119I TTCGAA 1 cut(s) 182
Bsp1286I GDGCHC 1 cut(s) 453
Bsp1407I TGTACA 1 cut(s) 1014
Bsp143I GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
Bsp19I CCATGG 1 cut(s) 1176
BspACI CCGC 7 cut(s) 257, 422, 552, 932, 1100, 1208, 1342
BspANI GGCC 3 cut(s) 284, 886, 1067
BspCNI CTCAG 5 cut(s) 212, 598, 865, 988, 1262
BspLI GGNNCC 5 cut(s) 261, 343, 714, 768, 982
BspMI ACCTGC 1 cut(s) 1444
BspPI GGATC 6 cut(s) 289, 563, 761, 774, 1233, 1249
BspT104I TTCGAA 1 cut(s) 182
BspT107I GGYRCC 2 cut(s) 712, 980
BspTNI GGTCTC 2 cut(s) 992, 1053
BsrDI GCAATG 4 cut(s) 417, 626, 1170, 1503
BsrGI TGTACA 1 cut(s) 1014
BssECI CCNNGG 5 cut(s) 279, 1062, 1176, 1232, 1262
BssMI GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
BssT1I CCWWGG 2 cut(s) 279, 1176
Bst2UI CCWGG 2 cut(s) 1263, 1422
Bst4CI ACNGT 1 cut(s) 448
Bst6I CTCTTC 3 cut(s) 71, 94, 460
BstAPI GCANNNNNTGC 1 cut(s) 619
BstAUI TGTACA 1 cut(s) 1014
BstBAI YACGTR 1 cut(s) 688
BstBI TTCGAA 1 cut(s) 182
BstC8I GCNNGC 2 cut(s) 1206, 1344
BstDEI CTNAG 5 cut(s) 199, 585, 873, 996, 1249
BstDSI CCRYGG 1 cut(s) 1176
BstF5I GGATG 1 cut(s) 1186
BstKTI GATC 8 cut(s) 234, 297, 571, 769, 973, 1241, 1257, 1440
BstMAI GTCTC 3 cut(s) 81, 992, 1053
BstMBI GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
BstMCI CGRYCG 1 cut(s) 376
BstMWI GCNNNNNNNGC 5 cut(s) 80, 506, 619, 628, 1310
BstNI CCWGG 2 cut(s) 1263, 1422
BstNSI RCATGY 3 cut(s) 965, 1118, 1227
BstPAI GACNNNNGTC 1 cut(s) 1398
BstSCI CCNGG 3 cut(s) 1231, 1261, 1420
BstSLI GKGCMC 1 cut(s) 453
BstV1I GCAGC 7 cut(s) 130, 133, 346, 496, 805, 1333, 1527
BstX2I RGATCY 3 cut(s) 294, 766, 1254
BstXI CCANNNNNNTGG 1 cut(s) 760
BstYI RGATCY 3 cut(s) 294, 766, 1254
BsuI GTATCC 2 cut(s) 928, 1069
BsuRI GGCC 3 cut(s) 284, 886, 1067
BtgI CCRYGG 1 cut(s) 1176
BtgZI GCGATG 1 cut(s) 444
BtsCI GGATG 1 cut(s) 1186
BtsI GCAGTG 2 cut(s) 354, 495
BtsIMutI CAGTG 6 cut(s) 316, 354, 453, 495, 849, 1543
BveI ACCTGC 1 cut(s) 1444
Cac8I GCNNGC 2 cut(s) 1206, 1344
Cfr13I GGNCC 4 cut(s) 259, 342, 436, 1229
CseI GACGC 2 cut(s) 63, 619
Csp6I GTAC 1 cut(s) 1015
CspCI CAANNNNNGTGG 2 cut(s) 1437, 1472
CviAII CATG 7 cut(s) 527, 832, 962, 1115, 1177, 1224, 1301
CviQI GTAC 1 cut(s) 1015
DdeI CTNAG 5 cut(s) 199, 585, 873, 996, 1249
DpnI GATC 8 cut(s) 233, 296, 570, 768, 972, 1240, 1256, 1439
DpnII GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
EaeI YGGCCR 1 cut(s) 282
Eam1104I CTCTTC 3 cut(s) 71, 94, 460
EarI CTCTTC 3 cut(s) 71, 94, 460
Eco130I CCWWGG 2 cut(s) 279, 1176
Eco31I GGTCTC 2 cut(s) 992, 1053
Eco47I GGWCC 4 cut(s) 259, 342, 436, 1229
Eco57I CTGAAG 2 cut(s) 441, 617
EcoO109I RGGNCCY 2 cut(s) 342, 436
EcoRI GAATTC 1 cut(s) 1090
EcoRII CCWGG 2 cut(s) 1261, 1420
EcoT14I CCWWGG 2 cut(s) 279, 1176
ErhI CCWWGG 2 cut(s) 279, 1176
Esp3I CGTCTC 1 cut(s) 81
FaeI CATG 7 cut(s) 530, 835, 965, 1118, 1180, 1227, 1304
FalI AAGNNNNNCTT 4 cut(s) 1117, 1149, 1288, 1320
FaqI GGGAC 1 cut(s) 299
FatI CATG 7 cut(s) 526, 831, 961, 1114, 1176, 1223, 1300
FauI CCCGC 1 cut(s) 1335
FauNDI CATATG 1 cut(s) 1309
FbaI TGATCA 1 cut(s) 1437
FblI GTMKAC 1 cut(s) 1188
Fnu4HI GCNGC 9 cut(s) 119, 122, 360, 510, 552, 819, 1209, 1347, 1516
FokI GGATG 1 cut(s) 1193
Fsp4HI GCNGC 9 cut(s) 119, 122, 360, 510, 552, 819, 1209, 1347, 1516
GluI GCNGC 9 cut(s) 119, 122, 360, 510, 552, 819, 1209, 1347, 1516
GsaI CCCAGC 1 cut(s) 1353
HaeIII GGCC 3 cut(s) 284, 886, 1067
HapII CCGG 2 cut(s) 1055, 1232
HgaI GACGC 2 cut(s) 63, 619
Hin1II CATG 7 cut(s) 530, 835, 965, 1118, 1180, 1227, 1304
HinfI GANTC 8 cut(s) 184, 300, 328, 670, 899, 1190, 1500, 1600
HpaII CCGG 2 cut(s) 1055, 1232
HphI GGTGA 3 cut(s) 87, 1447, 1471
Hpy166II GTNNAC 5 cut(s) 163, 1015, 1189, 1229, 1462
Hpy188I TCNGA 6 cut(s) 202, 299, 327, 663, 1063, 1252
Hpy188III TCNNGA 6 cut(s) 131, 439, 532, 566, 719, 1122
Hpy8I GTNNAC 5 cut(s) 163, 1015, 1189, 1229, 1462
Hpy99I CGWCG 2 cut(s) 386, 389
HpyAV CCTTC 4 cut(s) 897, 1327, 1331, 1426
HpyCH4III ACNGT 1 cut(s) 448
HpyCH4IV ACGT 3 cut(s) 177, 381, 687
HpyCH4V TGCA 6 cut(s) 512, 520, 697, 991, 1170, 1204
HpyF10VI GCNNNNNNNGC 5 cut(s) 80, 506, 619, 628, 1310
HpyF3I CTNAG 5 cut(s) 199, 585, 873, 996, 1249
HpySE526I ACGT 3 cut(s) 177, 381, 687
Hsp92II CATG 7 cut(s) 530, 835, 965, 1118, 1180, 1227, 1304
Ksp22I TGATCA 1 cut(s) 1437
Kzo9I GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
LmnI GCTCC 3 cut(s) 466, 1407, 1484
Lsp1109I GCAGC 7 cut(s) 130, 133, 346, 496, 805, 1333, 1527
LweI GCATC 3 cut(s) 244, 793, 805
MaeII ACGT 3 cut(s) 177, 381, 687
MaeIII GTNAC 3 cut(s) 868, 1274, 1400
MalI GATC 8 cut(s) 233, 296, 570, 768, 972, 1240, 1256, 1439
MboI GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
MfeI CAATTG 2 cut(s) 1069, 1243
MflI RGATCY 3 cut(s) 294, 766, 1254
MhlI GDGCHC 1 cut(s) 453
MlsI TGGCCA 1 cut(s) 284
MluNI TGGCCA 1 cut(s) 284
MlyI GAGTC 3 cut(s) 309, 1184, 1594
MmeI TCCRAC 1 cut(s) 372
Mox20I TGGCCA 1 cut(s) 284
MscI TGGCCA 1 cut(s) 284
MseI TTAA 4 cut(s) 743, 957, 1043, 1496
MslI CAYNNNNRTG 2 cut(s) 525, 1175
Msp20I TGGCCA 1 cut(s) 284
MspI CCGG 2 cut(s) 1055, 1232
MspR9I CCNGG 3 cut(s) 1233, 1263, 1422
MunI CAATTG 2 cut(s) 1069, 1243
MvaI CCWGG 2 cut(s) 1263, 1422
MwoI GCNNNNNNNGC 5 cut(s) 80, 506, 619, 628, 1310
NciI CCSGG 1 cut(s) 1233
NcoI CCATGG 1 cut(s) 1176
NdeI CATATG 1 cut(s) 1309
NdeII GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
NlaIII CATG 7 cut(s) 530, 835, 965, 1118, 1180, 1227, 1304
NlaIV GGNNCC 5 cut(s) 261, 343, 714, 768, 982
NmuCI GTSAC 1 cut(s) 1400
NspI RCATGY 3 cut(s) 965, 1118, 1227
NspV TTCGAA 1 cut(s) 182
PaqCI CACCTGC 1 cut(s) 1444
PciI ACATGT 1 cut(s) 1114
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PfeI GAWTC 5 cut(s) 184, 328, 670, 899, 1500
PflFI GACNNNGTC 1 cut(s) 652
PfoI TCCNGGA 1 cut(s) 1420
PkrI GCNGC 9 cut(s) 120, 123, 361, 511, 553, 820, 1210, 1348, 1517
PleI GAGTC 3 cut(s) 308, 1184, 1594
PpsI GAGTC 3 cut(s) 308, 1184, 1594
Ppu21I YACGTR 1 cut(s) 688
PpuMI RGGWCCY 2 cut(s) 342, 436
PscI ACATGT 1 cut(s) 1114
PshAI GACNNNNGTC 1 cut(s) 1398
Psp5II RGGWCCY 2 cut(s) 342, 436
Psp6I CCWGG 2 cut(s) 1261, 1420
PspFI CCCAGC 1 cut(s) 1349
PspGI CCWGG 2 cut(s) 1261, 1420
PspN4I GGNNCC 5 cut(s) 261, 343, 714, 768, 982
PspPI GGNCC 4 cut(s) 259, 342, 436, 1229
PspPPI RGGWCCY 2 cut(s) 342, 436
PsuI RGATCY 3 cut(s) 294, 766, 1254
PsyI GACNNNGTC 1 cut(s) 652
RsaI GTAC 1 cut(s) 1016
RsaNI GTAC 1 cut(s) 1015
RseI CAYNNNNRTG 2 cut(s) 525, 1175
SaqAI TTAA 4 cut(s) 743, 957, 1043, 1496
SatI GCNGC 9 cut(s) 119, 122, 360, 510, 552, 819, 1209, 1347, 1516
Sau3AI GATC 8 cut(s) 231, 294, 568, 766, 970, 1238, 1254, 1437
Sau96I GGNCC 4 cut(s) 259, 342, 436, 1229
SchI GAGTC 3 cut(s) 309, 1184, 1594
ScrFI CCNGG 3 cut(s) 1233, 1263, 1422
SduI GDGCHC 1 cut(s) 453
SfaNI GCATC 3 cut(s) 244, 793, 805
SfuI TTCGAA 1 cut(s) 182
SinI GGWCC 4 cut(s) 259, 342, 436, 1229
SmiMI CAYNNNNRTG 2 cut(s) 525, 1175
SmlI CTYRAG 2 cut(s) 78, 1510
SmoI CTYRAG 2 cut(s) 78, 1510
SsiI CCGC 7 cut(s) 257, 422, 552, 932, 1100, 1208, 1342
StyD4I CCNGG 3 cut(s) 1231, 1261, 1420
StyI CCWWGG 2 cut(s) 279, 1176
TaaI ACNGT 1 cut(s) 448
TaiI ACGT 3 cut(s) 180, 384, 690
TaqI TCGA 5 cut(s) 182, 376, 557, 1094, 1466
TaqII GACCGA 1 cut(s) 362
TatI WGTACW 1 cut(s) 1014
TauI GCSGC 2 cut(s) 554, 1211
TfiI GAWTC 5 cut(s) 184, 328, 670, 899, 1500
Tru1I TTAA 4 cut(s) 743, 957, 1043, 1496
Tru9I TTAA 4 cut(s) 743, 957, 1043, 1496
TscAI CASTG 6 cut(s) 316, 361, 453, 502, 856, 1543
TseFI GTSAC 1 cut(s) 1400
TseI GCWGC 7 cut(s) 118, 121, 359, 509, 818, 1346, 1515
Tsp45I GTSAC 1 cut(s) 1400
TspDTI ATGAA 6 cut(s) 683, 848, 1038, 1296, 1492, 1576
TspGWI ACGGA 1 cut(s) 561
TspRI CASTG 6 cut(s) 316, 361, 453, 502, 856, 1543
Tth111I GACNNNGTC 1 cut(s) 652
VpaK11BI GGWCC 4 cut(s) 259, 342, 436, 1229
XapI RAATTY 2 cut(s) 514, 1090
XceI RCATGY 3 cut(s) 965, 1118, 1227
XcmI CCANNNNNNNNNTGG 2 cut(s) 760, 1478
XmiI GTMKAC 1 cut(s) 1188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.