Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0003730

Physical Location & Seq

Genomic Coordinates Reverse (-)

1764889 .. 1768659

Gene Structure 3771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG024900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGCTCTTGATCACCACAAAACTCTTCCACATAAAACCCCCACTAACTTTCCCAATTCTTCATCTTCTTCCCCACCACATCACCCTAAACCCTATCAAAACCCTTATCACTCCACCTCCCAAAATGTCCTGGCAATGCAAAAACTGCACCTTTCTCAACCCCAAAACCCTCTCATCTCCAAAACCCACTTGCCAAATCTGCCTCTCTTCACCTCCCCAATCCCCATCTTCATCTTCCTCCTCTGCCTCAAAATGGGCCTGCAAGGCCTGCACTTTCTTGAACCCTTACAAGCGCTCCAGCTGTGAGGTCTGTGACACAAGGGCCCCAATCTCGAGCTTCGAGGATATGAATGATGACAATGGAGATGAGCTTGATGATCAAGTGGGCTCTGTTTTCTTGCCCTTGCAGAAGTGTAAGAGGAAGAGGGTTGAGGAAGATGAGGGTTCTGGGAACGGGTTTAAGGGCAGGAGGGTTCAAGACCCAGTTGAGTTTGCTGAGAAAATTACTGTATCAGACCCAGTTCAGGTTGCTAAGGATTCTGCCGCATTGAATGCTTTTAGAGGAGTCAAGGTGTCTGATAAGAAGAAGATTAATGTAACAGAGAGCACTAGTTCAGTTGAGTCTGCAAAGGATGATGCCAAATTCAGTTTGTTTCGAGGAGTCAAGGTGTCTGATAAGAAGGTTACTGTATCAGAGAGCAGTAGTTCCGGGTCTTCTGGAATGGGTTCGAATACGCTCAAGGTTTTGACTTACAATGTTTGGTTTCGAGAAGACTTAGAAATGCACAAGAGAATGAAAGCTATTGGTGACCTTGTCCTACAGCATTGCCCAGATGTCATTTGCTTTCAGGAGGTCACCCCCGATATATACGACATCTTTCAACAATCTAACTGGTGGAAAATGTATCAATGCTCAATTCCAAATCAGATGGCGATTTCACAACCTTACTTTTGCATGCAGTTAAGCAAATTGCAAGTGAAAGCCTTCAGCTGTAGACCATTTTCATACTCTGCGATGGGGAGAGAACTCTGTGTCACTGAAGTTGAAGTACAGGGGGACAAACATCTTGTTGTTGCCACTAGCCATCTTGAGAGTCCTTGCCCAGGCCCTCCAAAATGGGATCAGATGTACAGCAAGGAACGTGTAGATCAGGCAAAGGAGGCCCTCAACTTCTTAAAGAAGAACCCAAATGTGATTTTTTGCGGTGACATGAACTGGGATGACAAGTTGGATGGCCAAGTTCCTTTACCTGACAACTGGATTGATGCTTGGGTAGAGTTACGACCAGGGGAAGATGGATTGACGTATGATACCAAGTCCAACCAGATGTTGTCTGGTAACAGGTCACTGCGGAAGCGACTAGATCGATTCTTTTGCTGTCTGCACGATTTCAGGGTGAGCAAAATTGAAATGATTGGGACGAAAGCAATACCAGGTCTCTCATATATCAAGGAAAAGAAAGTGAAAGGGGAGATTAAGAAGCTGGAGCTCCCTGTTTTGCCTAGCGATCATTATGGCTTGCTTTTGACAATCTGTGGCCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008081 GO:0008150 GO:0008152 GO:0009987 GO:0016604 GO:0016605 GO:0016787 GO:0016788 GO:0030145 GO:0031974 GO:0031981 GO:0033554 GO:0034641 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051716 GO:0070013 GO:0070259 GO:0070260 GO:0071704 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo_endo_phos zf-RanBP

Protein Analysis

514

Amino Acids

57.8

Weight (kDa)

8.46

Isoelectric Point (pI)

48.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	249 - 504	5e-17	Endonuclease/Exonuclease/phosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003730)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11800
fragaria_vesca	FvH4_3g01860 FvH4_3g01880 FvH4_3g01880 FvH4_3g01880
malus_domestica	MD05G1348300.v1.1 MD10G1323100.v1.1 MD10G1323300.v1.1
prunus_persica	Prupe.4G019000_v2.0.a1 Prupe.4G019000_v2.0.a1 Prupe.4G019100_v2.0.a1
pyrus_communis	pycom05g31580 pycom10g27350 pycom10g27360
rosa_chinensis	RchiOBHm_Chr5g0002731 RchiOBHm_Chr5g0002751
rosa_laevigata	RLG00000031055
rosa_multiflora	Rmu_sc0013603.1_g000021 Rmu_sc0022235.1_g000001 Rmu_sc0042337.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073150
rosa_rugosa	Rorug04G0398800 Rorug04G0398900 Rorug04G0399000
rosa_samantha	Rh5AG022000 Rh5AG022100 Rh5BG024900 Rh5BG025000 Rh5CG024300 Rh5CG024400 Rh5DG023300 Rh5DG023400
rosa_wichuraiana	Rw5G002050 Rw5G002060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	994
AciI	CCGC	3 cut(s)	543, 1203, 1351
AclWI	GGATC	1 cut(s)	1128
AcoI	YGGCCR	2 cut(s)	1234, 1537
AcsI	RAATTY	1 cut(s)	641
AcuI	CTGAAG	2 cut(s)	970, 1059
AfaI	GTAC	2 cut(s)	1050, 1130
AfeI	AGCGCT	1 cut(s)	293
AfiI	CCNNNNNNNGG	3 cut(s)	252, 523, 1103
AflIII	ACRYGT	1 cut(s)	1141
AgsI	TTSAA	6 cut(s)	280, 476, 550, 881, 1046, 1409
AhlI	ACTAGT	1 cut(s)	608
AjnI	CCWGG	4 cut(s)	128, 1102, 1285, 1432
AluBI	AGCT	7 cut(s)	300, 336, 370, 800, 990, 1483, 1489
AluI	AGCT	7 cut(s)	300, 336, 370, 800, 990, 1483, 1489
Alw21I	GWGCWC	2 cut(s)	608, 1491
Alw26I	GTCTC	1 cut(s)	1442
AlwI	GGATC	1 cut(s)	1128
Ama87I	CYCGRG	1 cut(s)	331
Aor51HI	AGCGCT	1 cut(s)	293
AoxI	GGCC	7 cut(s)	255, 264, 321, 1105, 1161, 1234, 1537
ApaI	GGGCCC	1 cut(s)	325
ApoI	RAATTY	1 cut(s)	641
AseI	ATTAAT	1 cut(s)	591
Asp700I	GAANNNNTTC	2 cut(s)	724, 983
AspLEI	GCGC	1 cut(s)	294
AspS9I	GGNCC	5 cut(s)	255, 321, 322, 1106, 1162
AsuC2I	CCSGG	1 cut(s)	709
AsuHPI	GGTGA	7 cut(s)	4, 73, 201, 818, 847, 1217, 1408
AsuII	TTCGAA	1 cut(s)	728
AvaI	CYCGRG	1 cut(s)	331
BaeGI	GKGCMC	1 cut(s)	325
BalI	TGGCCA	2 cut(s)	1236, 1539
BanII	GRGCYC	3 cut(s)	325, 389, 1491
BarI	GAAGNNNNNNTAC	2 cut(s)	1032, 1064
BbsI	GAAGAC	2 cut(s)	705, 777
Bbv12I	GWGCWC	2 cut(s)	608, 1491
BccI	CCATC	6 cut(s)	232, 922, 1009, 1092, 1226, 1289
BcgI	CGANNNNNNTGC	2 cut(s)	1356, 1390
BciT130I	CCWGG	4 cut(s)	130, 1104, 1287, 1434
BclI	TGATCA	2 cut(s)	9, 376
BcnI	CCSGG	1 cut(s)	709
BcoDI	GTCTC	1 cut(s)	1442
BcuI	ACTAGT	1 cut(s)	608
BfaI	CTAG	4 cut(s)	609, 1080, 1361, 1503
BfmI	CTRYAG	2 cut(s)	818, 991
BfoI	RGCGCY	1 cut(s)	295
BglI	GCCNNNNNGGC	1 cut(s)	263
BisI	GCNGC	1 cut(s)	543
BlsI	GCNGC	1 cut(s)	544
Bme1390I	CCNGG	5 cut(s)	130, 709, 1104, 1287, 1434
BmeT110I	CYCGRG	1 cut(s)	331
BmgT120I	GGNCC	5 cut(s)	255, 321, 322, 1106, 1162
BmiI	GGNNCC	2 cut(s)	323, 324
BmrFI	CCNGG	5 cut(s)	130, 709, 1104, 1287, 1434
BmrI	ACTGGG	3 cut(s)	476, 512, 1225
BmsI	GCATC	2 cut(s)	625, 1255
BmuI	ACTGGG	3 cut(s)	476, 512, 1225
BpiI	GAAGAC	2 cut(s)	705, 777
BpmI	CTGGAG	2 cut(s)	280, 1505
Bpu10I	CCTNAGC	1 cut(s)	531
Bpu14I	TTCGAA	1 cut(s)	728
BpuEI	CTTGAG	2 cut(s)	722, 1109
BpuMI	CCSGG	1 cut(s)	709
Bsa29I	ATCGAT	1 cut(s)	1366
BsaI	GGTCTC	1 cut(s)	1442
BsaJI	CCNNGG	2 cut(s)	1102, 1286
BsaXI	ACNNNNNCTCC	8 cut(s)	100, 130, 278, 308, 555, 585, 651, 681
Bsc4I	CCNNNNNNNGG	3 cut(s)	252, 523, 1103
Bse1I	ACTGG	6 cut(s)	482, 518, 896, 1220, 1262, 1540
Bse3DI	GCAATG	2 cut(s)	140, 823
BseBI	CCWGG	4 cut(s)	130, 1104, 1287, 1434
BseCI	ATCGAT	1 cut(s)	1366
BseDI	CCNNGG	2 cut(s)	1102, 1286
BseGI	GGATG	3 cut(s)	637, 1225, 1237
BseLI	CCNNNNNNNGG	3 cut(s)	252, 523, 1103
BseMI	GCAATG	2 cut(s)	140, 823
BseMII	CTCAG	1 cut(s)	486
BseNI	ACTGG	6 cut(s)	482, 518, 896, 1220, 1262, 1540
BseRI	GAGGAG	3 cut(s)	229, 576, 672
BseSI	GKGCMC	1 cut(s)	325
BsgI	GTGCAG	3 cut(s)	130, 253, 1367
BshFI	GGCC	7 cut(s)	257, 266, 323, 1107, 1163, 1236, 1539
BshVI	ATCGAT	1 cut(s)	1366
BsiHKAI	GWGCWC	2 cut(s)	608, 1491
BsiHKCI	CYCGRG	1 cut(s)	331
BsiSI	CCGG	1 cut(s)	708
BslFI	GGGAC	2 cut(s)	1070, 1432
BslI	CCNNNNNNNGG	3 cut(s)	252, 523, 1103
BsmAI	GTCTC	1 cut(s)	1442
BsmFI	GGGAC	2 cut(s)	1070, 1432
BsmI	GAATGC	1 cut(s)	556
BsnI	GGCC	7 cut(s)	257, 266, 323, 1107, 1163, 1236, 1539
Bso31I	GGTCTC	1 cut(s)	1442
BsoBI	CYCGRG	1 cut(s)	331
Bsp119I	TTCGAA	1 cut(s)	728
Bsp120I	GGGCCC	1 cut(s)	321
Bsp1286I	GDGCHC	4 cut(s)	325, 389, 608, 1491
Bsp1407I	TGTACA	1 cut(s)	1128
Bsp143I	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
BspACI	CCGC	3 cut(s)	543, 1203, 1351
BspANI	GGCC	7 cut(s)	257, 266, 323, 1107, 1163, 1236, 1539
BspCNI	CTCAG	1 cut(s)	487
BspDI	ATCGAT	1 cut(s)	1366
BspLI	GGNNCC	2 cut(s)	323, 324
BspPI	GGATC	1 cut(s)	1128
BspT104I	TTCGAA	1 cut(s)	728
BspTNI	GGTCTC	1 cut(s)	1442
BsrDI	GCAATG	2 cut(s)	140, 823
BsrGI	TGTACA	1 cut(s)	1128
BsrI	ACTGG	6 cut(s)	482, 518, 896, 1220, 1262, 1540
BssECI	CCNNGG	2 cut(s)	1102, 1286
BssMI	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
Bst2UI	CCWGG	4 cut(s)	130, 1104, 1287, 1434
Bst4CI	ACNGT	2 cut(s)	508, 688
Bst6I	CTCTTC	3 cut(s)	29, 211, 416
BstAPI	GCANNNNNTGC	3 cut(s)	144, 267, 551
BstAUI	TGTACA	1 cut(s)	1128
BstBI	TTCGAA	1 cut(s)	728
BstC8I	GCNNGC	4 cut(s)	259, 268, 956, 1520
BstDEI	CTNAG	3 cut(s)	495, 531, 775
BstEII	GGTNACC	2 cut(s)	806, 853
BstENI	CCTNNNNNAGG	1 cut(s)	1101
BstF5I	GGATG	3 cut(s)	637, 1225, 1237
BstH2I	RGCGCY	1 cut(s)	295
BstHHI	GCGC	1 cut(s)	294
BstKTI	GATC	6 cut(s)	12, 379, 1123, 1150, 1366, 1510
BstMAI	GTCTC	1 cut(s)	1442
BstMBI	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
BstMWI	GCNNNNNNNGC	6 cut(s)	144, 198, 263, 267, 551, 1160
BstNI	CCWGG	4 cut(s)	130, 1104, 1287, 1434
BstNSI	RCATGY	1 cut(s)	958
BstPI	GGTNACC	2 cut(s)	806, 853
BstSCI	CCNGG	5 cut(s)	128, 707, 1102, 1285, 1432
BstSFI	CTRYAG	2 cut(s)	818, 991
BstSLI	GKGCMC	1 cut(s)	325
BstV2I	GAAGAC	2 cut(s)	705, 777
Bsu15I	ATCGAT	1 cut(s)	1366
BsuRI	GGCC	7 cut(s)	257, 266, 323, 1107, 1163, 1236, 1539
BsuTUI	ATCGAT	1 cut(s)	1366
BtgZI	GCGATG	1 cut(s)	1028
BtsCI	GGATG	3 cut(s)	637, 1225, 1237
BtsI	GCAGTG	1 cut(s)	1346
BtsIMutI	CAGTG	2 cut(s)	1035, 1346
Cac8I	GCNNGC	4 cut(s)	259, 268, 956, 1520
CfoI	GCGC	1 cut(s)	294
Cfr13I	GGNCC	5 cut(s)	255, 321, 322, 1106, 1162
ClaI	ATCGAT	1 cut(s)	1366
CsiI	ACCWGGT	1 cut(s)	1432
Csp6I	GTAC	2 cut(s)	1049, 1129
CviAII	CATG	2 cut(s)	955, 1210
CviQI	GTAC	2 cut(s)	1049, 1129
DdeI	CTNAG	3 cut(s)	495, 531, 775
DpnI	GATC	6 cut(s)	11, 378, 1122, 1149, 1365, 1509
DpnII	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
EaeI	YGGCCR	2 cut(s)	1234, 1537
Eam1104I	CTCTTC	3 cut(s)	29, 211, 416
EarI	CTCTTC	3 cut(s)	29, 211, 416
Ecl136II	GAGCTC	1 cut(s)	1489
Eco147I	AGGCCT	1 cut(s)	266
Eco24I	GRGCYC	3 cut(s)	325, 389, 1491
Eco31I	GGTCTC	1 cut(s)	1442
Eco47III	AGCGCT	1 cut(s)	293
Eco53kI	GAGCTC	1 cut(s)	1489
Eco57I	CTGAAG	2 cut(s)	970, 1059
Eco88I	CYCGRG	1 cut(s)	331
Eco91I	GGTNACC	2 cut(s)	806, 853
EcoICRI	GAGCTC	1 cut(s)	1489
EcoNI	CCTNNNNNAGG	1 cut(s)	1101
EcoO109I	RGGNCCY	4 cut(s)	321, 322, 1106, 1162
EcoO65I	GGTNACC	2 cut(s)	806, 853
EcoRII	CCWGG	4 cut(s)	128, 1102, 1285, 1432
EcoT38I	GRGCYC	3 cut(s)	325, 389, 1491
FaeI	CATG	2 cut(s)	958, 1213
FaqI	GGGAC	2 cut(s)	1070, 1432
FatI	CATG	2 cut(s)	954, 1209
FbaI	TGATCA	2 cut(s)	9, 376
FblI	GTMKAC	1 cut(s)	994
Fnu4HI	GCNGC	1 cut(s)	543
FokI	GGATG	3 cut(s)	644, 1232, 1244
FriOI	GRGCYC	3 cut(s)	325, 389, 1491
Fsp4HI	GCNGC	1 cut(s)	543
FspBI	CTAG	4 cut(s)	609, 1080, 1361, 1503
GlaI	GCGC	1 cut(s)	293
GluI	GCNGC	1 cut(s)	543
GsuI	CTGGAG	2 cut(s)	280, 1505
HaeII	RGCGCY	1 cut(s)	295
HaeIII	GGCC	7 cut(s)	257, 266, 323, 1107, 1163, 1236, 1539
HapII	CCGG	1 cut(s)	708
HhaI	GCGC	1 cut(s)	294
Hin1II	CATG	2 cut(s)	958, 1213
Hin6I	GCGC	1 cut(s)	292
HinP1I	GCGC	1 cut(s)	292
HinfI	GANTC	6 cut(s)	536, 564, 620, 660, 1093, 1368
HpaII	CCGG	1 cut(s)	708
HphI	GGTGA	7 cut(s)	4, 73, 201, 818, 847, 1217, 1408
Hpy166II	GTNNAC	1 cut(s)	995
Hpy188I	TCNGA	6 cut(s)	514, 577, 673, 694, 927, 1125
Hpy188III	TCNNGA	8 cut(s)	7, 277, 331, 476, 717, 767, 848, 1088
Hpy8I	GTNNAC	1 cut(s)	995
HpyAV	CCTTC	2 cut(s)	673, 994
HpyCH4III	ACNGT	2 cut(s)	508, 688
HpyCH4IV	ACGT	2 cut(s)	1141, 1304
HpyF10VI	GCNNNNNNNGC	6 cut(s)	144, 198, 263, 267, 551, 1160
HpyF3I	CTNAG	3 cut(s)	495, 531, 775
HpySE526I	ACGT	2 cut(s)	1141, 1304
Hsp92II	CATG	2 cut(s)	958, 1213
HspAI	GCGC	1 cut(s)	292
Ksp22I	TGATCA	2 cut(s)	9, 376
Kzo9I	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
LmnI	GCTCC	3 cut(s)	299, 1486, 1494
LweI	GCATC	2 cut(s)	625, 1255
MabI	ACCWGGT	1 cut(s)	1432
MaeI	CTAG	4 cut(s)	609, 1080, 1361, 1503
MaeII	ACGT	2 cut(s)	1141, 1304
MalI	GATC	6 cut(s)	11, 378, 1122, 1149, 1365, 1509
MboI	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
MhlI	GDGCHC	4 cut(s)	325, 389, 608, 1491
MlsI	TGGCCA	2 cut(s)	1236, 1539
MluCI	AATT	6 cut(s)	54, 501, 641, 915, 968, 1404
MluNI	TGGCCA	2 cut(s)	1236, 1539
MlyI	GAGTC	4 cut(s)	573, 629, 669, 1102
MmeI	TCCRAC	2 cut(s)	1209, 1344
Mox20I	TGGCCA	2 cut(s)	1236, 1539
MroXI	GAANNNNTTC	2 cut(s)	724, 983
MscI	TGGCCA	2 cut(s)	1236, 1539
MseI	TTAA	5 cut(s)	459, 591, 962, 1175, 1476
Msp20I	TGGCCA	2 cut(s)	1236, 1539
MspA1I	CMGCKG	2 cut(s)	300, 990
MspI	CCGG	1 cut(s)	708
MspR9I	CCNGG	5 cut(s)	130, 709, 1104, 1287, 1434
Mva1269I	GAATGC	1 cut(s)	556
MvaI	CCWGG	4 cut(s)	130, 1104, 1287, 1434
MwoI	GCNNNNNNNGC	6 cut(s)	144, 198, 263, 267, 551, 1160
NciI	CCSGG	1 cut(s)	709
NdeII	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
NlaIII	CATG	2 cut(s)	958, 1213
NlaIV	GGNNCC	2 cut(s)	323, 324
NmuCI	GTSAC	6 cut(s)	311, 806, 853, 1033, 1205, 1344
NspI	RCATGY	1 cut(s)	958
NspV	TTCGAA	1 cut(s)	728
PaeI	GCATGC	1 cut(s)	958
PaeR7I	CTCGAG	1 cut(s)	331
PceI	AGGCCT	1 cut(s)	266
PctI	GAATGC	1 cut(s)	556
PdmI	GAANNNNTTC	2 cut(s)	724, 983
PfeI	GAWTC	2 cut(s)	536, 1368
PflFI	GACNNNGTC	1 cut(s)	812
PkrI	GCNGC	1 cut(s)	544
PleI	GAGTC	4 cut(s)	572, 628, 668, 1101
PpsI	GAGTC	4 cut(s)	572, 628, 668, 1101
PshBI	ATTAAT	1 cut(s)	591
Psp124BI	GAGCTC	1 cut(s)	1491
Psp6I	CCWGG	4 cut(s)	128, 1102, 1285, 1432
PspEI	GGTNACC	2 cut(s)	806, 853
PspGI	CCWGG	4 cut(s)	128, 1102, 1285, 1432
PspN4I	GGNNCC	2 cut(s)	323, 324
PspOMI	GGGCCC	1 cut(s)	321
PspPI	GGNCC	5 cut(s)	255, 321, 322, 1106, 1162
PsyI	GACNNNGTC	1 cut(s)	812
PvuII	CAGCTG	2 cut(s)	300, 990
RsaI	GTAC	2 cut(s)	1050, 1130
RsaNI	GTAC	2 cut(s)	1049, 1129
SacI	GAGCTC	1 cut(s)	1491
SaqAI	TTAA	5 cut(s)	459, 591, 962, 1175, 1476
SatI	GCNGC	1 cut(s)	543
Sau3AI	GATC	6 cut(s)	9, 376, 1120, 1147, 1363, 1507
Sau96I	GGNCC	5 cut(s)	255, 321, 322, 1106, 1162
SchI	GAGTC	4 cut(s)	573, 629, 669, 1102
ScrFI	CCNGG	5 cut(s)	130, 709, 1104, 1287, 1434
SduI	GDGCHC	4 cut(s)	325, 389, 608, 1491
SexAI	ACCWGGT	1 cut(s)	1432
SfaNI	GCATC	2 cut(s)	625, 1255
SfcI	CTRYAG	2 cut(s)	818, 991
SfiI	GGCCNNNNNGGCC	1 cut(s)	263
Sfr274I	CTCGAG	1 cut(s)	331
SfuI	TTCGAA	1 cut(s)	728
SlaI	CTCGAG	1 cut(s)	331
SmlI	CTYRAG	3 cut(s)	331, 737, 1088
SmoI	CTYRAG	3 cut(s)	331, 737, 1088
SpeI	ACTAGT	1 cut(s)	608
SphI	GCATGC	1 cut(s)	958
Sse9I	AATT	6 cut(s)	54, 501, 641, 915, 968, 1404
SseBI	AGGCCT	1 cut(s)	266
SsiI	CCGC	3 cut(s)	543, 1203, 1351
SspMI	CTAG	4 cut(s)	609, 1080, 1361, 1503
SstI	GAGCTC	1 cut(s)	1491
StuI	AGGCCT	1 cut(s)	266
StyD4I	CCNGG	5 cut(s)	128, 707, 1102, 1285, 1432
TaaI	ACNGT	2 cut(s)	508, 688
TaiI	ACGT	2 cut(s)	1144, 1307
TaqI	TCGA	6 cut(s)	332, 339, 655, 728, 766, 1366
TasI	AATT	6 cut(s)	54, 501, 641, 915, 968, 1404
TatI	WGTACW	2 cut(s)	1048, 1128
TauI	GCSGC	1 cut(s)	545
TfiI	GAWTC	2 cut(s)	536, 1368
Tru1I	TTAA	5 cut(s)	459, 591, 962, 1175, 1476
Tru9I	TTAA	5 cut(s)	459, 591, 962, 1175, 1476
TscAI	CASTG	2 cut(s)	1042, 1353
TseFI	GTSAC	6 cut(s)	311, 806, 853, 1033, 1205, 1344
Tsp45I	GTSAC	6 cut(s)	311, 806, 853, 1033, 1205, 1344
TspDTI	ATGAA	6 cut(s)	50, 219, 362, 809, 993, 1226
TspRI	CASTG	2 cut(s)	1042, 1353
Tth111I	GACNNNGTC	1 cut(s)	812
VspI	ATTAAT	1 cut(s)	591
XagI	CCTNNNNNAGG	1 cut(s)	1101
XapI	RAATTY	1 cut(s)	641
XceI	RCATGY	1 cut(s)	958
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1331
XhoI	CTCGAG	1 cut(s)	331
XmiI	GTMKAC	1 cut(s)	994
XmnI	GAANNNNTTC	2 cut(s)	724, 983
XspI	CTAG	4 cut(s)	609, 1080, 1361, 1503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.