RLG00000031055

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
1616936 .. 1623622
6687 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031055

Sequence Viewer

Length: 3159 bp
ATGGCATATACTAAGCTCCAACTCTCAACCCTCTATTTCTTCTTGCTCATCCTCACTCTACTACTCTCCACATCCTCAAAAGCTCAATCTCCTCAAATTCAGGAGGAAGACAGAGAGCCATTTGTTGGAGTGAATATAGGCACCGACGTTTCGAATCTCCTCTCCCCATCCGACCTCGTTTCGTTTCTCCAACTCCAGAAAATCACCCACATCCGTCTCTACGATGCCGACCCGGACATTCTCAAAGCCTTGGCCAAAACCAAGATCCGGGTCATCATCAGCGTACCCAATAACCAGCTCATCGCAATTGGGTCCTCCAACACCACCGCCGCTTCCTGGGTCGGTCGAAACGTCGTCGCTTACTACCCACAAACCCTAATCACAGGCATTGCGGTTGGGGATGAAGTCCTCACCACAGTGCCCTCTTCAGCTCCTCTGCTTGTTCCTGCAATTGAGTCCCTTTACAGTGCTCTAGTGGCTTCGAATTTACACACCAACGTCAAGATTTCGACTCCGAATGCGGCCTCTATTATTCTTGACCCTTTTCCTCCTTCTCAGGCCTTCTTCAACCAGAGCTTGATTGACATTGTGCTGCCTTTGCTTCGGTTCTTGTCGAAAACCGGGTCTCCCTTGATGATGAATCTGTATCCTTACTATGTGTTTATGCAGAACAAAGGTGTGGTGCCTTTGGATAATGCCCTGTTCAAGCCTTTGACGCCCTCCAAAGAAATGGTGGATCCCAATACTCTGCTTCATTATACGAATGTGTTGGATGCTATGATTGATGCTGCTTATTTTTCGATGAAGAATTTGAATGTGACTGATGTTTTGGTGCTTGTTACCGAGAGTGGTTGGCCTTCAAAAGCTGATGCTAAGGAGCCTTATGCTACTATTGACAATGCGGATACTTACAATTCGAATTTGATTAAGCATGTTTTTGATCGTAGTGGGACTCCTTTGCATCCTGAGACCACCTCGAGTGTGTTCCTTTATGAGTTGTTCAATGAAGATTTGAGGTCTCCGCCGGTTTCTGAGGCCAATTGGGGCTTGTTTTATGGCAATTCGAGTGCTGTGTATTTGCTTCATGTTTCGGGGAGTGGGACTTTTTTGGCTAATGATACAACAAACCAGACATTTTGCATTGCCATGGATGGGGTGGATGGAAAGACTTTGCAAGCAGCTTTGGATTGGGCTTGTGGACCGGGGCGGGCTAATTGCACAGAGATTCAGCCTGGGGAGAATTGTTACTCTCCTAACAATGTGAAAAGCCATGCTTCTTATGCTTTTGATAGCTATTACCAGAAGCAAGGAAAGGCTGCTGGGTCTTGTGATTTCAAAGGTGTAGCCACCATTACTACCACTGACCCAAGTAAAGGGAGCTGTATATTTCCTGGAAGTAAACAAGTTAGCAATATAACAAAGCAGGTGGTGAACTCAAGTCATGCAAGTGGTGCAGCAGAGAGGTTAAAATTCATTGGCTTCGGCAGTAAAAGACCAAGTGCAATTAGCTGGGTGCTATATATAAAGCGCTTTGCAGAGGATCTTCATCACAACCCTCTGCACAAAGAAAGCGCTAATTTTCAAAATTGGGCCTCTTGCTTTATACCCTCCACAATGCTCTTGATCACCACAAAACTCTTCCACATAAAACCCCCACTACCTTTCCCAATTCTTCATCTTCGTCCCCACCACAACTTCATAAACCCTAGAAAACCCCCTTACATTCCACCTCCCAAAATGTCCTGGCAATGCAAAAACTGCACCTTTCTCAACCCCAAAACCCTCTCATCTCCAAAACCCACTTGCCAAGTCTGCCTTTCTTCACCTCCCCAATCCCCATCTTCATCTTCCTCCTCTGCTTCCAAATGGGCCTGCAAGGCCTGCACTTTCTTGAACCCTTACAAGCGCTCCAGCTGTGAGGTCTGTGACACAAGGGCACCAATCTCGAGCTTCGAGGATCTGAATGATGACAATGGAGATGAGCTTGATGATCAAGTGGGCTCTGTTTTCTTGCCCTTGCAGAAGTGTAAGAGGAAGAGGGTTGAGGAAGATGAGGGTTCTGAGAATGGGTTTAAGGGGAGGAGGGTTCAAGACCCAGTTGAGTTTGCTGAGAAAATGACTGTATCAGACCCAGTTCAGGTTGCTAAGGATTCTGCCACATTGAATGCGTTTAGAGGAATCAAGGTGTCTGATAAGAAGAAAATTGCTGTATCAGAAAGCACTAGTTCAGTTGAGTCTGCAAAGGATGATGCCAAATTCAGTTTGTTTAGAGGAGTCAAGGTGTCTGATAAGAAGGTTACTGTATCAGAGAGCAGTAGTTCCGGGTCTTCTGGAATGGGTTTGAATACGCTCAAGGTTTTGACTTACAATGTTTGGTTTCGAGAAGACTTAGAAATGCACAAGAGAATGAAAGCTATTGGTGACCTTGTCCTACAGCATTGCCCAGATGTCATTTGCTTTCAGGAGGTTACCCCTGATATATATGACATCTTTCAACAATCTAACTGGTGGAAAATGTATCAATGCTCAATTCCAAATCAGATGGCGATTTCACAACCTTACTTTTGCATGCAGTTAAGCAAATTGCAAGTGAAAGCCTTCAGCTGCAGACCATTTTCATACTCTGCGATGGGGAGAGAACTCTGTGTCACTGAAGTTGAAGTACAGGGGGACAAACATCTTGTTGTTGCCACTAGCCATCTTGAGAGTCCTTGCCCAGGCCCTCCAAAATGGGATCAGATGTACAGCAAGGAACGTGTAGATCAGGCAAAGGAGGCCCTCAACTTCTTAAAGAAGAACCCAAATGTGATTTTTTGCGGTGACATGAACTGGGATGACAAGTTGGATGGCCAAGTTCCTTTACCTGACAACTGGATTGATGCTTGGGTAGAGTTACGACCAGGGGAAGATGGATTGACGTATGATACCAAGTCCAACCAGATGTTGTCTGGTAACAGGTCACTGCGGAAGCGACTAGATCGATTCTTTTGCTGTCTGCACGATTTCAGGGTGAGCAAAATTGAAATGATTGGGATGAAAGCAATACCAGGTCTCTCATATATCAAGGAAAAGAAAGTGAAAGGGGAGATTAAGAAGCTGGAGCTTCCTGTTTTGCCTAGCGATCATTATGGCTTGCTTTTGACAATCTGTGGCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1053

Amino Acids

116.76

Weight (kDa)

7.66

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 42 - 361 1e-67 Glycosyl hydrolases family 17
X8 PF07983 379 - 450 1.3e-22 X8 domain
Exo_endo_phos PF03372 787 - 1042 3.4e-16 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1414
Acc36I ACCTGC 1 cut(s) 1414
AccB1I GGYRCC 3 cut(s) 140, 682, 1936
AccB7I CCANNNNNTGG 1 cut(s) 125
AciI CCGC 9 cut(s) 327, 330, 392, 521, 902, 1022, 1207, 2817, 2965
AclWI GGATC 6 cut(s) 259, 731, 744, 1548, 1965, 2742
AcoI YGGCCR 3 cut(s) 252, 2848, 3151
AcsI RAATTY 6 cut(s) 96, 484, 808, 919, 1469, 2255
AcuI CTGAAG 3 cut(s) 411, 2584, 2673
AcyI GRCGYC 1 cut(s) 716
AfaI GTAC 3 cut(s) 285, 2664, 2744
AfeI AGCGCT 3 cut(s) 1529, 1573, 1907
AfiI CCNNNNNNNGG 7 cut(s) 125, 267, 336, 1152, 1373, 2137, 2717
AflIII ACRYGT 1 cut(s) 2755
AhlI ACTAGT 1 cut(s) 2222
AjnI CCWGG 7 cut(s) 335, 1231, 1390, 1742, 2716, 2899, 3046
AleI CACNNNNGTG 1 cut(s) 416
Alw21I GWGCWC 1 cut(s) 472
Alw26I GTCTC 5 cut(s) 221, 630, 962, 1023, 3056
AlwI GGATC 6 cut(s) 259, 731, 744, 1548, 1965, 2742
Ama87I CYCGRG 2 cut(s) 976, 1945
Aor51HI AGCGCT 3 cut(s) 1529, 1573, 1907
ApeKI GCWGC 6 cut(s) 592, 788, 1178, 1316, 1454, 2604
ApoI RAATTY 6 cut(s) 96, 484, 808, 919, 1469, 2255
ArsI GACNNNNNNTTYG 4 cut(s) 608, 640, 811, 843
Asp700I GAANNNNTTC 1 cut(s) 2597
AspLEI GCGC 3 cut(s) 1530, 1574, 1908
AspS9I GGNCC 6 cut(s) 312, 1199, 1590, 1869, 2720, 2776
AsuC2I CCSGG 5 cut(s) 233, 269, 622, 1203, 2323
AsuHPI GGTGA 8 cut(s) 196, 403, 1441, 1618, 1815, 2432, 2831, 3022
AsuII TTCGAA 3 cut(s) 152, 482, 917
AvaI CYCGRG 2 cut(s) 976, 1945
AvaII GGWCC 2 cut(s) 312, 1199
BaeGI GKGCMC 2 cut(s) 423, 1939
BalI TGGCCA 3 cut(s) 254, 2850, 3153
BamHI GGATCC 1 cut(s) 736
BanI GGYRCC 3 cut(s) 140, 682, 1936
BanII GRGCYC 1 cut(s) 2003
BarI GAAGNNNNNNTAC 2 cut(s) 2646, 2678
BbsI GAAGAC 3 cut(s) 114, 2319, 2391
Bbv12I GWGCWC 1 cut(s) 472
BbvI GCAGC 6 cut(s) 579, 775, 1190, 1303, 1466, 2591
BccI CCATC 9 cut(s) 175, 1145, 1154, 1846, 2536, 2623, 2706, 2840, 2903
BcgI CGANNNNNNTGC 4 cut(s) 1926, 1960, 2970, 3004
BciT130I CCWGG 7 cut(s) 337, 1233, 1392, 1744, 2718, 2901, 3048
BciVI GTATCC 2 cut(s) 657, 898
BclI TGATCA 2 cut(s) 1623, 1990
BcnI CCSGG 5 cut(s) 233, 269, 622, 1203, 2323
BcoDI GTCTC 5 cut(s) 221, 630, 962, 1023, 3056
BcuI ACTAGT 1 cut(s) 2222
BfaI CTAG 6 cut(s) 473, 1707, 2223, 2694, 2975, 3117
BfmI CTRYAG 2 cut(s) 2432, 2605
BfoI RGCGCY 3 cut(s) 1531, 1575, 1909
BfuAI ACCTGC 1 cut(s) 1414
BfuI GTATCC 2 cut(s) 657, 898
BglI GCCNNNNNGGC 1 cut(s) 1877
BisI GCNGC 8 cut(s) 330, 522, 593, 789, 1179, 1317, 1455, 2605
BlsI GCNGC 8 cut(s) 331, 523, 594, 790, 1180, 1318, 1456, 2606
Bme18I GGWCC 2 cut(s) 312, 1199
BmeT110I CYCGRG 2 cut(s) 976, 1945
BmgT120I GGNCC 6 cut(s) 312, 1199, 1590, 1869, 2720, 2776
BmiI GGNNCC 6 cut(s) 142, 313, 684, 738, 879, 1938
BmrI ACTGGG 3 cut(s) 2090, 2126, 2839
BmsI GCATC 7 cut(s) 214, 763, 775, 859, 970, 2239, 2869
BmuI ACTGGG 3 cut(s) 2090, 2126, 2839
BpiI GAAGAC 3 cut(s) 114, 2319, 2391
BplI GAGNNNNNCTC 2 cut(s) 959, 991
BpmI CTGGAG 3 cut(s) 179, 1894, 3119
Bpu10I CCTNAGC 2 cut(s) 873, 2145
Bpu14I TTCGAA 3 cut(s) 152, 482, 917
BpuEI CTTGAG 3 cut(s) 1420, 2336, 2723
BpuMI CCSGG 5 cut(s) 233, 269, 622, 1203, 2323
Bsa29I ATCGAT 1 cut(s) 2980
BsaBI GATNNNNATC 1 cut(s) 1545
BsaHI GRCGYC 1 cut(s) 716
BsaI GGTCTC 4 cut(s) 630, 962, 1023, 3056
BsaJI CCNNGG 7 cut(s) 249, 336, 1146, 1202, 1232, 2716, 2900
BsaXI ACNNNNNCTCC 6 cut(s) 610, 640, 1892, 1922, 2265, 2295
Bsc4I CCNNNNNNNGG 7 cut(s) 125, 267, 336, 1152, 1373, 2137, 2717
Bse118I RCCGGY 1 cut(s) 1024
Bse1I ACTGG 6 cut(s) 2096, 2132, 2510, 2834, 2876, 3154
Bse3DI GCAATG 4 cut(s) 387, 1140, 1754, 2437
Bse8I GATNNNNATC 1 cut(s) 1545
BseBI CCWGG 7 cut(s) 337, 1233, 1392, 1744, 2718, 2901, 3048
BseCI ATCGAT 1 cut(s) 2980
BseDI CCNNGG 7 cut(s) 249, 336, 1146, 1202, 1232, 2716, 2900
BseJI GATNNNNATC 1 cut(s) 1545
BseLI CCNNNNNNNGG 7 cut(s) 125, 267, 336, 1152, 1373, 2137, 2717
BseMI GCAATG 4 cut(s) 387, 1140, 1754, 2437
BseMII CTCAG 5 cut(s) 569, 957, 1023, 2052, 2100
BseNI ACTGG 6 cut(s) 2096, 2132, 2510, 2834, 2876, 3154
BseRI GAGGAG 6 cut(s) 81, 149, 423, 1843, 2095, 2286
BseSI GKGCMC 2 cut(s) 423, 1939
BseXI GCAGC 6 cut(s) 579, 775, 1190, 1303, 1466, 2591
BseYI CCCAGC 2 cut(s) 1319, 1509
BsgI GTGCAG 5 cut(s) 1473, 1544, 1744, 1867, 2981
Bsh1285I CGRYCG 1 cut(s) 346
BshNI GGYRCC 3 cut(s) 140, 682, 1936
BshVI ATCGAT 1 cut(s) 2980
BsiEI CGRYCG 1 cut(s) 346
BsiHKAI GWGCWC 1 cut(s) 472
BsiHKCI CYCGRG 2 cut(s) 976, 1945
BsiSI CCGG 6 cut(s) 233, 268, 621, 1025, 1202, 2322
BslFI GGGAC 5 cut(s) 442, 964, 1114, 1668, 2684
BslI CCNNNNNNNGG 7 cut(s) 125, 267, 336, 1152, 1373, 2137, 2717
BsmAI GTCTC 5 cut(s) 221, 630, 962, 1023, 3056
BsmBI CGTCTC 1 cut(s) 221
BsmFI GGGAC 5 cut(s) 442, 964, 1114, 1668, 2684
BsmI GAATGC 2 cut(s) 523, 2170
Bso31I GGTCTC 4 cut(s) 630, 962, 1023, 3056
BsoBI CYCGRG 2 cut(s) 976, 1945
Bsp119I TTCGAA 3 cut(s) 152, 482, 917
Bsp1286I GDGCHC 4 cut(s) 423, 472, 1939, 2003
Bsp1407I TGTACA 1 cut(s) 2742
Bsp19I CCATGG 1 cut(s) 1146
BspACI CCGC 9 cut(s) 327, 330, 392, 521, 902, 1022, 1207, 2817, 2965
BspCNI CTCAG 5 cut(s) 568, 958, 1024, 2053, 2101
BspDI ATCGAT 1 cut(s) 2980
BspLI GGNNCC 6 cut(s) 142, 313, 684, 738, 879, 1938
BspMAI CTGCAG 1 cut(s) 2609
BspMI ACCTGC 1 cut(s) 1414
BspPI GGATC 6 cut(s) 259, 731, 744, 1548, 1965, 2742
BspT104I TTCGAA 3 cut(s) 152, 482, 917
BspT107I GGYRCC 3 cut(s) 140, 682, 1936
BspTNI GGTCTC 4 cut(s) 630, 962, 1023, 3056
BsrDI GCAATG 4 cut(s) 387, 1140, 1754, 2437
BsrFI RCCGGY 1 cut(s) 1024
BsrGI TGTACA 1 cut(s) 2742
BsrI ACTGG 6 cut(s) 2096, 2132, 2510, 2834, 2876, 3154
BssAI RCCGGY 1 cut(s) 1024
BssECI CCNNGG 7 cut(s) 249, 336, 1146, 1202, 1232, 2716, 2900
BssNI GRCGYC 1 cut(s) 716
BssT1I CCWWGG 2 cut(s) 249, 1146
Bst2UI CCWGG 7 cut(s) 337, 1233, 1392, 1744, 2718, 2901, 3048
Bst4CI ACNGT 4 cut(s) 418, 467, 2122, 2302
Bst6I CTCTTC 3 cut(s) 430, 1643, 2030
BstACI GRCGYC 1 cut(s) 716
BstAPI GCANNNNNTGC 3 cut(s) 1451, 1758, 1881
BstAUI TGTACA 1 cut(s) 2742
BstBI TTCGAA 3 cut(s) 152, 482, 917
BstC8I GCNNGC 6 cut(s) 1176, 1209, 1873, 1882, 2570, 3134
BstDEI CTNAG 9 cut(s) 12, 555, 873, 966, 1032, 2061, 2109, 2145, 2389
BstDSI CCRYGG 1 cut(s) 1146
BstEII GGTNACC 2 cut(s) 2420, 2467
BstENI CCTNNNNNAGG 1 cut(s) 2715
BstH2I RGCGCY 3 cut(s) 1531, 1575, 1909
BstHHI GCGC 3 cut(s) 1530, 1574, 1908
BstMAI GTCTC 5 cut(s) 221, 630, 962, 1023, 3056
BstMCI CGRYCG 1 cut(s) 346
BstNI CCWGG 7 cut(s) 337, 1233, 1392, 1744, 2718, 2901, 3048
BstNSI RCATGY 2 cut(s) 935, 2572
BstPI GGTNACC 2 cut(s) 2420, 2467
BstSFI CTRYAG 2 cut(s) 2432, 2605
BstSLI GKGCMC 2 cut(s) 423, 1939
BstV1I GCAGC 6 cut(s) 579, 775, 1190, 1303, 1466, 2591
BstV2I GAAGAC 3 cut(s) 114, 2319, 2391
BstX2I RGATCY 4 cut(s) 264, 736, 1540, 1957
BstXI CCANNNNNNTGG 1 cut(s) 730
BstYI RGATCY 4 cut(s) 264, 736, 1540, 1957
Bsu15I ATCGAT 1 cut(s) 2980
BsuI GTATCC 2 cut(s) 657, 898
BsuTUI ATCGAT 1 cut(s) 2980
BtgI CCRYGG 1 cut(s) 1146
BtgZI GCGATG 2 cut(s) 286, 2642
BtsI GCAGTG 1 cut(s) 2960
BtsIMutI CAGTG 5 cut(s) 423, 472, 1359, 2649, 2960
BveI ACCTGC 1 cut(s) 1414
Cac8I GCNNGC 6 cut(s) 1176, 1209, 1873, 1882, 2570, 3134
CfoI GCGC 3 cut(s) 1530, 1574, 1908
Cfr10I RCCGGY 1 cut(s) 1024
Cfr13I GGNCC 6 cut(s) 312, 1199, 1590, 1869, 2720, 2776
ClaI ATCGAT 1 cut(s) 2980
CseI GACGC 1 cut(s) 724
CsiI ACCWGGT 1 cut(s) 3046
Csp6I GTAC 3 cut(s) 284, 2663, 2743
CspCI CAANNNNNGTGG 2 cut(s) 1407, 1442
CviAII CATG 7 cut(s) 932, 1085, 1147, 1271, 1442, 2569, 2824
CviQI GTAC 3 cut(s) 284, 2663, 2743
DdeI CTNAG 9 cut(s) 12, 555, 873, 966, 1032, 2061, 2109, 2145, 2389
EaeI YGGCCR 3 cut(s) 252, 2848, 3151
Eam1104I CTCTTC 3 cut(s) 430, 1643, 2030
EarI CTCTTC 3 cut(s) 430, 1643, 2030
EciI GGCGGA 1 cut(s) 1011
Eco130I CCWWGG 2 cut(s) 249, 1146
Eco147I AGGCCT 2 cut(s) 560, 1880
Eco24I GRGCYC 1 cut(s) 2003
Eco31I GGTCTC 4 cut(s) 630, 962, 1023, 3056
Eco47I GGWCC 2 cut(s) 312, 1199
Eco47III AGCGCT 3 cut(s) 1529, 1573, 1907
Eco57I CTGAAG 3 cut(s) 411, 2584, 2673
Eco88I CYCGRG 2 cut(s) 976, 1945
Eco91I GGTNACC 2 cut(s) 2420, 2467
EcoNI CCTNNNNNAGG 1 cut(s) 2715
EcoO109I RGGNCCY 3 cut(s) 312, 2720, 2776
EcoO65I GGTNACC 2 cut(s) 2420, 2467
EcoRII CCWGG 7 cut(s) 335, 1231, 1390, 1742, 2716, 2899, 3046
EcoT14I CCWWGG 2 cut(s) 249, 1146
EcoT38I GRGCYC 1 cut(s) 2003
ErhI CCWWGG 2 cut(s) 249, 1146
Esp3I CGTCTC 1 cut(s) 221
FaeI CATG 7 cut(s) 935, 1088, 1150, 1274, 1445, 2572, 2827
FalI AAGNNNNNCTT 4 cut(s) 1258, 1290, 1800, 1832
FaqI GGGAC 5 cut(s) 442, 964, 1114, 1668, 2684
FatI CATG 7 cut(s) 931, 1084, 1146, 1270, 1441, 2568, 2823
FauI CCCGC 1 cut(s) 1200
FbaI TGATCA 2 cut(s) 1623, 1990
Fnu4HI GCNGC 8 cut(s) 330, 522, 593, 789, 1179, 1317, 1455, 2605
FriOI GRGCYC 1 cut(s) 2003
Fsp4HI GCNGC 8 cut(s) 330, 522, 593, 789, 1179, 1317, 1455, 2605
FspBI CTAG 6 cut(s) 473, 1707, 2223, 2694, 2975, 3117
GlaI GCGC 3 cut(s) 1529, 1573, 1907
GluI GCNGC 8 cut(s) 330, 522, 593, 789, 1179, 1317, 1455, 2605
GsaI CCCAGC 2 cut(s) 1323, 1513
GsuI CTGGAG 3 cut(s) 179, 1894, 3119
HaeII RGCGCY 3 cut(s) 1531, 1575, 1909
HapII CCGG 6 cut(s) 233, 268, 621, 1025, 1202, 2322
HgaI GACGC 1 cut(s) 724
HhaI GCGC 3 cut(s) 1530, 1574, 1908
Hin1I GRCGYC 1 cut(s) 716
Hin1II CATG 7 cut(s) 935, 1088, 1150, 1274, 1445, 2572, 2827
Hin6I GCGC 3 cut(s) 1528, 1572, 1906
HinP1I GCGC 3 cut(s) 1528, 1572, 1906
HpaII CCGG 6 cut(s) 233, 268, 621, 1025, 1202, 2322
HphI GGTGA 8 cut(s) 196, 403, 1441, 1618, 1815, 2432, 2831, 3022
Hpy166II GTNNAC 3 cut(s) 1199, 1400, 1432
Hpy8I GTNNAC 3 cut(s) 1199, 1400, 1432
Hpy99I CGWCG 3 cut(s) 149, 356, 359
HpyAV CCTTC 5 cut(s) 561, 571, 867, 2287, 2608
HpyCH4III ACNGT 4 cut(s) 418, 467, 2122, 2302
HpyCH4IV ACGT 5 cut(s) 147, 351, 498, 2755, 2918
HpyF3I CTNAG 9 cut(s) 12, 555, 873, 966, 1032, 2061, 2109, 2145, 2389
HpySE526I ACGT 5 cut(s) 147, 351, 498, 2755, 2918
Hsp92I GRCGYC 1 cut(s) 716
Hsp92II CATG 7 cut(s) 935, 1088, 1150, 1274, 1445, 2572, 2827
HspAI GCGC 3 cut(s) 1528, 1572, 1906
Ksp22I TGATCA 2 cut(s) 1623, 1990
LmnI GCTCC 6 cut(s) 21, 436, 877, 1377, 1913, 3100
Lsp1109I GCAGC 6 cut(s) 579, 775, 1190, 1303, 1466, 2591
LweI GCATC 7 cut(s) 214, 763, 775, 859, 970, 2239, 2869
MabI ACCWGGT 1 cut(s) 3046
MaeI CTAG 6 cut(s) 473, 1707, 2223, 2694, 2975, 3117
MaeII ACGT 5 cut(s) 147, 351, 498, 2755, 2918
MfeI CAATTG 3 cut(s) 306, 450, 1039
MflI RGATCY 4 cut(s) 264, 736, 1540, 1957
MhlI GDGCHC 4 cut(s) 423, 472, 1939, 2003
MlsI TGGCCA 3 cut(s) 254, 2850, 3153
MluNI TGGCCA 3 cut(s) 254, 2850, 3153
MlyI GAGTC 6 cut(s) 464, 505, 946, 2243, 2283, 2716
MmeI TCCRAC 8 cut(s) 43, 106, 195, 214, 342, 750, 2823, 2958
Mox20I TGGCCA 3 cut(s) 254, 2850, 3153
MroXI GAANNNNTTC 1 cut(s) 2597
MscI TGGCCA 3 cut(s) 254, 2850, 3153
MseI TTAA 6 cut(s) 927, 1466, 2073, 2576, 2789, 3090
MslI CAYNNNNRTG 3 cut(s) 416, 1145, 1446
Msp20I TGGCCA 3 cut(s) 254, 2850, 3153
MspA1I CMGCKG 2 cut(s) 1914, 2604
MspI CCGG 6 cut(s) 233, 268, 621, 1025, 1202, 2322
MunI CAATTG 3 cut(s) 306, 450, 1039
Mva1269I GAATGC 2 cut(s) 523, 2170
MvaI CCWGG 7 cut(s) 337, 1233, 1392, 1744, 2718, 2901, 3048
NciI CCSGG 5 cut(s) 233, 269, 622, 1203, 2323
NcoI CCATGG 1 cut(s) 1146
NlaIII CATG 7 cut(s) 935, 1088, 1150, 1274, 1445, 2572, 2827
NlaIV GGNNCC 6 cut(s) 142, 313, 684, 738, 879, 1938
NmuCI GTSAC 6 cut(s) 817, 1925, 2420, 2647, 2819, 2958
NspI RCATGY 2 cut(s) 935, 2572
NspV TTCGAA 3 cut(s) 152, 482, 917
OliI CACNNNNGTG 1 cut(s) 416
PaeI GCATGC 1 cut(s) 2572
PaeR7I CTCGAG 2 cut(s) 976, 1945
PaqCI CACCTGC 1 cut(s) 1414
PceI AGGCCT 2 cut(s) 560, 1880
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 2 cut(s) 523, 2170
PdmI GAANNNNTTC 1 cut(s) 2597
PfeI GAWTC 6 cut(s) 154, 640, 1225, 2150, 2178, 2982
PflFI GACNNNGTC 1 cut(s) 2426
PflMI CCANNNNNTGG 1 cut(s) 125
PfoI TCCNGGA 1 cut(s) 1390
PkrI GCNGC 8 cut(s) 331, 523, 594, 790, 1180, 1318, 1456, 2606
PleI GAGTC 6 cut(s) 463, 505, 946, 2242, 2282, 2715
PpsI GAGTC 6 cut(s) 463, 505, 946, 2242, 2282, 2715
PpuMI RGGWCCY 1 cut(s) 312
Psp5II RGGWCCY 1 cut(s) 312
Psp6I CCWGG 7 cut(s) 335, 1231, 1390, 1742, 2716, 2899, 3046
PspEI GGTNACC 2 cut(s) 2420, 2467
PspFI CCCAGC 2 cut(s) 1319, 1509
PspGI CCWGG 7 cut(s) 335, 1231, 1390, 1742, 2716, 2899, 3046
PspN4I GGNNCC 6 cut(s) 142, 313, 684, 738, 879, 1938
PspPI GGNCC 6 cut(s) 312, 1199, 1590, 1869, 2720, 2776
PspPPI RGGWCCY 1 cut(s) 312
PspXI VCTCGAGB 1 cut(s) 976
PstI CTGCAG 1 cut(s) 2609
PsuI RGATCY 4 cut(s) 264, 736, 1540, 1957
PsyI GACNNNGTC 1 cut(s) 2426
PvuII CAGCTG 2 cut(s) 1914, 2604
RsaI GTAC 3 cut(s) 285, 2664, 2744
RsaNI GTAC 3 cut(s) 284, 2663, 2743
RseI CAYNNNNRTG 3 cut(s) 416, 1145, 1446
SaqAI TTAA 6 cut(s) 927, 1466, 2073, 2576, 2789, 3090
SatI GCNGC 8 cut(s) 330, 522, 593, 789, 1179, 1317, 1455, 2605
Sau96I GGNCC 6 cut(s) 312, 1199, 1590, 1869, 2720, 2776
SchI GAGTC 6 cut(s) 464, 505, 946, 2243, 2283, 2716
SduI GDGCHC 4 cut(s) 423, 472, 1939, 2003
SexAI ACCWGGT 1 cut(s) 3046
SfaNI GCATC 7 cut(s) 214, 763, 775, 859, 970, 2239, 2869
SfcI CTRYAG 2 cut(s) 2432, 2605
SfiI GGCCNNNNNGGCC 1 cut(s) 1877
Sfr274I CTCGAG 2 cut(s) 976, 1945
SfuI TTCGAA 3 cut(s) 152, 482, 917
SinI GGWCC 2 cut(s) 312, 1199
SlaI CTCGAG 2 cut(s) 976, 1945
SmiMI CAYNNNNRTG 3 cut(s) 416, 1145, 1446
SmlI CTYRAG 5 cut(s) 976, 1435, 1945, 2351, 2702
SmoI CTYRAG 5 cut(s) 976, 1435, 1945, 2351, 2702
SpeI ACTAGT 1 cut(s) 2222
SphI GCATGC 1 cut(s) 2572
SseBI AGGCCT 2 cut(s) 560, 1880
SsiI CCGC 9 cut(s) 327, 330, 392, 521, 902, 1022, 1207, 2817, 2965
SspMI CTAG 6 cut(s) 473, 1707, 2223, 2694, 2975, 3117
StuI AGGCCT 2 cut(s) 560, 1880
StyI CCWWGG 2 cut(s) 249, 1146
TaaI ACNGT 4 cut(s) 418, 467, 2122, 2302
TaiI ACGT 5 cut(s) 150, 354, 501, 2758, 2921
TaqII GACCGA 1 cut(s) 332
TatI WGTACW 2 cut(s) 2662, 2742
TauI GCSGC 2 cut(s) 332, 524
TfiI GAWTC 6 cut(s) 154, 640, 1225, 2150, 2178, 2982
Tru1I TTAA 6 cut(s) 927, 1466, 2073, 2576, 2789, 3090
Tru9I TTAA 6 cut(s) 927, 1466, 2073, 2576, 2789, 3090
TscAI CASTG 5 cut(s) 423, 472, 1366, 2656, 2967
TseFI GTSAC 6 cut(s) 817, 1925, 2420, 2647, 2819, 2958
TseI GCWGC 6 cut(s) 592, 788, 1178, 1316, 1454, 2604
Tsp45I GTSAC 6 cut(s) 817, 1925, 2420, 2647, 2819, 2958
TspGWI ACGGA 1 cut(s) 203
TspRI CASTG 5 cut(s) 423, 472, 1366, 2656, 2967
Tth111I GACNNNGTC 1 cut(s) 2426
Van91I CCANNNNNTGG 1 cut(s) 125
VpaK11BI GGWCC 2 cut(s) 312, 1199
XagI CCTNNNNNAGG 1 cut(s) 2715
XapI RAATTY 6 cut(s) 96, 484, 808, 919, 1469, 2255
XceI RCATGY 2 cut(s) 935, 2572
XcmI CCANNNNNNNNNTGG 3 cut(s) 730, 1153, 2945
XhoI CTCGAG 2 cut(s) 976, 1945
XmnI GAANNNNTTC 1 cut(s) 2597
XspI CTAG 6 cut(s) 473, 1707, 2223, 2694, 2975, 3117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.