Prupe.4G254000_v2.0.a1

Protein of unknown function, DUF604

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
17441290 .. 17444075
2786 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G254000.1

Sequence Viewer

Length: 1452 bp
ATGTGTTCTCTACTGTCCATCAAATCTAGCTCATCTCAACCAAAACTAGCTTTATGCAACTCTTTTCTAGCTATTTCAGCACTAATCCTACTATCTTTTTATATATTTTTCTTTGACAAATCACACAATAACCAACCTTTAAATCTCTTGGAAGCCTTCCAGAAAAGCTGTCCGGCAGCTAATACAAGTTCCCCTAGTCCCCTACCACCTACCAATCTAAACCACATTGTGGTCGGAATTGTTGGCTCCATGAACACATGGAAGAAGAAGAAAGCATACACTGAAGCATGGTGGAAACCTAATGTTACCCGCGGTTACCTCTTTTTAGATCGAGCTCCTAAACCAGAATTTCTACCATGGCCTTCATCTGCTCCTCCTTTTCGAATCAGTGAGGACATCACCGGATTCAAAGTGTACCCAAAAATTGTGAGGCCAGACCAAGTACGAATTATACGTACAATTTTGGAGACATTCAGAGAGGGTGACAAAGATGTGAGATGGTATGTAATGGCGGATGATGATACCATCCTTTTTGTTGATAACTTAGTTGAGGTTCTTGCAAAGTATGACCACACTAAGTACTATTACATTGGTTCCAGTTCGGAATGTATTAAGTCTAACTTCGATTTTTCCTTCGATATGGCGTTTGGCGGCGGTGGTTATGCTTTGAGCTACCCGTTGGTGGCAACATTGGCAACAAAGTTGGATGAGTGTATTGAGAGATATCCATACTTGCGGGTCAGTGATTTTATGTTACATTCATGTTTGGCTGACTTGGGAGTCGCTCTAACTCAAGAAAAGGGGTTTCACCAGATTGATCTCCATGGTGACATATCAGGTCTTCTATCATCTCATCCACAATCTCCTCTCCTCTCCCTCCACCACATTGACACCATAGACCCAATCTTCCCCTTCATGAGCCGCTCTGAGTCCATTAACCACCTCATGAGGCCAGCAAAAGTTGACTCTTCTCGTCTTCTTCAACAAACCATCTGCTACCACAGACCAAGCAATTGGTCTTTCTCAATCTCATGGGGCTATTCTGCTCACATTTATGAGAACATAATTCCCCGGAGCATTTTACGGAGACCCCTCGAGACATTTAGGCCTTGGAAGAATTCAATAAGACCGCCATTCTACATGTTCAATACCCGGCTAACTTACAATGATCCATGTCAAGCTCCTCATCTGTTTTCCTTTGATTCTATTGCTGAGAATGTTAAAGGGAACCAAACTATTACAACTTATTCACGAACAGCTCCACGTGGTTTGCCACCTTGTTCTTCAAGTGGAAACCACTCGGCGGATTTTATCACCAAAATTCAGGTTACTTTGCCTGCAATACGTTTGGAGGCCAGAGGGATAGACTGCTGTGATATAGCATATGCACCTGACATTAACACTACTCAACTTATATACAGAGCTTGCATGGAGGGTGAAATTATTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

484

Amino Acids

54.73

Weight (kDa)

7.92

Isoelectric Point (pI)

49.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 779
AccB7I CCANNNNNTGG 1 cut(s) 229
AccBSI CCGCTC 1 cut(s) 924
AccII CGCG 1 cut(s) 312
AciI CCGC 9 cut(s) 310, 312, 512, 651, 654, 736, 922, 1130, 1304
AclWI GGATC 1 cut(s) 1163
AcsI RAATTY 3 cut(s) 347, 1117, 1320
AcuI CTGAAG 1 cut(s) 303
AcvI CACGTG 1 cut(s) 1265
AdeI CACNNNGTG 1 cut(s) 229
AfaI GTAC 4 cut(s) 416, 444, 457, 581
AfiI CCNNNNNNNGG 3 cut(s) 229, 682, 1303
AflIII ACRYGT 1 cut(s) 1140
AgsI TTSAA 5 cut(s) 409, 983, 1122, 1147, 1287
Alw21I GWGCWC 1 cut(s) 337
Alw26I GTCTC 3 cut(s) 461, 1081, 1091
AlwI GGATC 1 cut(s) 1163
Ama87I CYCGRG 1 cut(s) 1094
AoxI GGCC 5 cut(s) 359, 431, 950, 1106, 1353
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 3 cut(s) 347, 1117, 1320
AsuC2I CCSGG 2 cut(s) 1072, 1153
AsuHPI GGTGA 6 cut(s) 391, 494, 800, 839, 1306, 1448
AsuII TTCGAA 1 cut(s) 382
AvaI CYCGRG 1 cut(s) 1094
BanII GRGCYC 1 cut(s) 337
BarI GAAGNNNNNNTAC 2 cut(s) 260, 292
BbrPI CACGTG 1 cut(s) 1265
BbsI GAAGAC 2 cut(s) 833, 968
Bbv12I GWGCWC 1 cut(s) 337
BbvI GCAGC 1 cut(s) 188
BccI CCATC 4 cut(s) 26, 492, 533, 998
BcnI CCSGG 2 cut(s) 1072, 1153
BcoDI GTCTC 3 cut(s) 461, 1081, 1091
BfaI CTAG 4 cut(s) 27, 47, 68, 195
BisI GCNGC 3 cut(s) 177, 652, 922
BlsI GCNGC 3 cut(s) 178, 653, 923
BmcAI AGTACT 1 cut(s) 581
Bme1390I CCNGG 2 cut(s) 1072, 1153
BmeT110I CYCGRG 1 cut(s) 1094
BmiI GGNNCC 3 cut(s) 247, 595, 1229
BmrFI CCNGG 2 cut(s) 1072, 1153
BpiI GAAGAC 2 cut(s) 833, 968
Bpu14I TTCGAA 1 cut(s) 382
BpuEI CTTGAG 1 cut(s) 777
BpuMI CCSGG 2 cut(s) 1072, 1153
BsaAI YACGTR 2 cut(s) 455, 1265
BsaI GGTCTC 1 cut(s) 1081
BsaJI CCNNGG 5 cut(s) 310, 356, 823, 1070, 1109
BsaWI WCCGGW 1 cut(s) 401
Bsc4I CCNNNNNNNGG 3 cut(s) 229, 682, 1303
Bse1I ACTGG 1 cut(s) 597
BseDI CCNNGG 5 cut(s) 310, 356, 823, 1070, 1109
BseGI GGATG 4 cut(s) 520, 525, 712, 853
BseLI CCNNNNNNNGG 3 cut(s) 229, 682, 1303
BseMII CTCAG 2 cut(s) 918, 1203
BseNI ACTGG 1 cut(s) 597
BseRI GAGGAG 4 cut(s) 363, 855, 860, 1173
BseXI GCAGC 1 cut(s) 188
Bsh1236I CGCG 1 cut(s) 312
BshFI GGCC 5 cut(s) 361, 433, 952, 1108, 1355
BsiHKAI GWGCWC 1 cut(s) 337
BsiHKCI CYCGRG 1 cut(s) 1094
BsiSI CCGG 4 cut(s) 173, 402, 1072, 1153
BslFI GGGAC 1 cut(s) 183
BslI CCNNNNNNNGG 3 cut(s) 229, 682, 1303
BsmAI GTCTC 3 cut(s) 461, 1081, 1091
BsmFI GGGAC 1 cut(s) 183
BsnI GGCC 5 cut(s) 361, 433, 952, 1108, 1355
Bso31I GGTCTC 1 cut(s) 1081
BsoBI CYCGRG 1 cut(s) 1094
Bsp119I TTCGAA 1 cut(s) 382
Bsp1286I GDGCHC 1 cut(s) 337
Bsp143I GATC 3 cut(s) 328, 817, 1168
Bsp19I CCATGG 2 cut(s) 356, 823
BspACI CCGC 9 cut(s) 310, 312, 512, 651, 654, 736, 922, 1130, 1304
BspANI GGCC 5 cut(s) 361, 433, 952, 1108, 1355
BspCNI CTCAG 2 cut(s) 919, 1204
BspFNI CGCG 1 cut(s) 312
BspHI TCATGA 2 cut(s) 915, 945
BspLI GGNNCC 3 cut(s) 247, 595, 1229
BspPI GGATC 1 cut(s) 1163
BspT104I TTCGAA 1 cut(s) 382
BspTNI GGTCTC 1 cut(s) 1081
BsrBI CCGCTC 1 cut(s) 924
BsrI ACTGG 1 cut(s) 597
BssECI CCNNGG 5 cut(s) 310, 356, 823, 1070, 1109
BssMI GATC 3 cut(s) 328, 817, 1168
BssT1I CCWWGG 3 cut(s) 356, 823, 1109
Bst4CI ACNGT 1 cut(s) 15
Bst6I CTCTTC 1 cut(s) 973
BstBAI YACGTR 2 cut(s) 455, 1265
BstBI TTCGAA 1 cut(s) 382
BstC8I GCNNGC 3 cut(s) 954, 1338, 1426
BstDEI CTNAG 4 cut(s) 544, 576, 927, 1212
BstDSI CCRYGG 3 cut(s) 310, 356, 823
BstEII GGTNACC 1 cut(s) 314
BstF5I GGATG 4 cut(s) 520, 525, 712, 853
BstFNI CGCG 1 cut(s) 312
BstKTI GATC 3 cut(s) 331, 820, 1171
BstMAI GTCTC 3 cut(s) 461, 1081, 1091
BstMBI GATC 3 cut(s) 328, 817, 1168
BstMWI GCNNNNNNNGC 2 cut(s) 77, 692
BstNSI RCATGY 1 cut(s) 1144
BstPI GGTNACC 1 cut(s) 314
BstSCI CCNGG 2 cut(s) 1070, 1151
BstSNI TACGTA 1 cut(s) 455
BstUI CGCG 1 cut(s) 312
BstV1I GCAGC 1 cut(s) 188
BstV2I GAAGAC 2 cut(s) 833, 968
BstXI CCANNNNNNTGG 1 cut(s) 1014
BsuRI GGCC 5 cut(s) 361, 433, 952, 1108, 1355
BtgI CCRYGG 3 cut(s) 310, 356, 823
BtsCI GGATG 4 cut(s) 520, 525, 712, 853
BtsIMutI CAGTG 3 cut(s) 279, 394, 748
Cac8I GCNNGC 3 cut(s) 954, 1338, 1426
CciI TCATGA 2 cut(s) 915, 945
Cfr42I CCGCGG 1 cut(s) 313
Csp6I GTAC 4 cut(s) 415, 443, 456, 580
CspCI CAANNNNNGTGG 2 cut(s) 1251, 1286
CviQI GTAC 4 cut(s) 415, 443, 456, 580
DdeI CTNAG 4 cut(s) 544, 576, 927, 1212
DpnI GATC 3 cut(s) 330, 819, 1170
DpnII GATC 3 cut(s) 328, 817, 1168
DraI TTTAAA 1 cut(s) 141
DraIII CACNNNGTG 1 cut(s) 229
DrdI GACNNNNNNGTC 1 cut(s) 779
DseDI GACNNNNNNGTC 1 cut(s) 779
Eam1104I CTCTTC 1 cut(s) 973
EarI CTCTTC 1 cut(s) 973
EciI GGCGGA 2 cut(s) 527, 1319
Ecl136II GAGCTC 1 cut(s) 335
Eco105I TACGTA 1 cut(s) 455
Eco130I CCWWGG 3 cut(s) 356, 823, 1109
Eco147I AGGCCT 1 cut(s) 1108
Eco24I GRGCYC 1 cut(s) 337
Eco31I GGTCTC 1 cut(s) 1081
Eco32I GATATC 1 cut(s) 725
Eco53kI GAGCTC 1 cut(s) 335
Eco57I CTGAAG 1 cut(s) 303
Eco72I CACGTG 1 cut(s) 1265
Eco88I CYCGRG 1 cut(s) 1094
Eco91I GGTNACC 1 cut(s) 314
EcoICRI GAGCTC 1 cut(s) 335
EcoO65I GGTNACC 1 cut(s) 314
EcoRI GAATTC 1 cut(s) 1117
EcoRV GATATC 1 cut(s) 725
EcoT14I CCWWGG 3 cut(s) 356, 823, 1109
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 3 cut(s) 356, 823, 1109
FalI AAGNNNNNCTT 2 cut(s) 605, 637
FaqI GGGAC 1 cut(s) 183
FauI CCCGC 2 cut(s) 317, 729
FauNDI CATATG 1 cut(s) 1384
Fnu4HI GCNGC 3 cut(s) 177, 652, 922
FokI GGATG 4 cut(s) 512, 527, 719, 840
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 3 cut(s) 177, 652, 922
FspBI CTAG 4 cut(s) 27, 47, 68, 195
GluI GCNGC 3 cut(s) 177, 652, 922
HaeIII GGCC 5 cut(s) 361, 433, 952, 1108, 1355
HapII CCGG 4 cut(s) 173, 402, 1072, 1153
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HinfI GANTC 6 cut(s) 384, 405, 780, 929, 965, 1202
HpaII CCGG 4 cut(s) 173, 402, 1072, 1153
HphI GGTGA 6 cut(s) 391, 494, 800, 839, 1306, 1448
Hpy166II GTNNAC 2 cut(s) 415, 964
Hpy188I TCNGA 4 cut(s) 236, 476, 604, 928
Hpy188III TCNNGA 6 cut(s) 160, 794, 916, 946, 1096, 1251
Hpy8I GTNNAC 2 cut(s) 415, 964
HpyAV CCTTC 4 cut(s) 166, 372, 643, 922
HpyCH4III ACNGT 1 cut(s) 15
HpyCH4IV ACGT 3 cut(s) 454, 1264, 1345
HpyCH4V TGCA 5 cut(s) 57, 560, 1340, 1388, 1428
HpyF10VI GCNNNNNNNGC 2 cut(s) 77, 692
HpyF3I CTNAG 4 cut(s) 544, 576, 927, 1212
HpySE526I ACGT 3 cut(s) 454, 1264, 1345
KspI CCGCGG 1 cut(s) 313
Kzo9I GATC 3 cut(s) 328, 817, 1168
LmnI GCTCC 6 cut(s) 251, 340, 376, 1074, 1186, 1264
Lsp1109I GCAGC 1 cut(s) 188
MaeI CTAG 4 cut(s) 27, 47, 68, 195
MaeII ACGT 3 cut(s) 454, 1264, 1345
MaeIII GTNAC 6 cut(s) 304, 314, 482, 753, 827, 1327
MalI GATC 3 cut(s) 330, 819, 1170
MbiI CCGCTC 1 cut(s) 924
MboI GATC 3 cut(s) 328, 817, 1168
MfeI CAATTG 1 cut(s) 1012
MhlI GDGCHC 1 cut(s) 337
MlyI GAGTC 3 cut(s) 789, 938, 959
MmeI TCCRAC 2 cut(s) 214, 684
MseI TTAA 5 cut(s) 140, 612, 936, 1221, 1398
MslI CAYNNNNRTG 1 cut(s) 1053
MspA1I CMGCKG 1 cut(s) 312
MspI CCGG 4 cut(s) 173, 402, 1072, 1153
MspR9I CCNGG 2 cut(s) 1072, 1153
MunI CAATTG 1 cut(s) 1012
MvnI CGCG 1 cut(s) 312
MwoI GCNNNNNNNGC 2 cut(s) 77, 692
NciI CCSGG 2 cut(s) 1072, 1153
NcoI CCATGG 2 cut(s) 356, 823
NdeI CATATG 1 cut(s) 1384
NdeII GATC 3 cut(s) 328, 817, 1168
NlaIV GGNNCC 3 cut(s) 247, 595, 1229
NmeAIII GCCGAG 1 cut(s) 1280
NmuCI GTSAC 2 cut(s) 482, 827
NspI RCATGY 1 cut(s) 1144
NspV TTCGAA 1 cut(s) 382
PaeR7I CTCGAG 1 cut(s) 1094
PagI TCATGA 2 cut(s) 915, 945
PceI AGGCCT 1 cut(s) 1108
PciI ACATGT 1 cut(s) 1140
PcsI WCGNNNNNNNCGW 1 cut(s) 451
PfeI GAWTC 3 cut(s) 384, 405, 1202
PflMI CCANNNNNTGG 1 cut(s) 229
PkrI GCNGC 3 cut(s) 178, 653, 923
PleI GAGTC 3 cut(s) 788, 937, 959
PmaCI CACGTG 1 cut(s) 1265
PmlI CACGTG 1 cut(s) 1265
PpsI GAGTC 3 cut(s) 788, 937, 959
Ppu21I YACGTR 2 cut(s) 455, 1265
PscI ACATGT 1 cut(s) 1140
Psp124BI GAGCTC 1 cut(s) 337
PspCI CACGTG 1 cut(s) 1265
PspEI GGTNACC 1 cut(s) 314
PspN4I GGNNCC 3 cut(s) 247, 595, 1229
RsaI GTAC 4 cut(s) 416, 444, 457, 581
RsaNI GTAC 4 cut(s) 415, 443, 456, 580
RseI CAYNNNNRTG 1 cut(s) 1053
SacI GAGCTC 1 cut(s) 337
SacII CCGCGG 1 cut(s) 313
SaqAI TTAA 5 cut(s) 140, 612, 936, 1221, 1398
SatI GCNGC 3 cut(s) 177, 652, 922
Sau3AI GATC 3 cut(s) 328, 817, 1168
ScaI AGTACT 1 cut(s) 581
SchI GAGTC 3 cut(s) 789, 938, 959
ScrFI CCNGG 2 cut(s) 1072, 1153
SduI GDGCHC 1 cut(s) 337
Sfr274I CTCGAG 1 cut(s) 1094
Sfr303I CCGCGG 1 cut(s) 313
SfuI TTCGAA 1 cut(s) 382
SgrBI CCGCGG 1 cut(s) 313
SlaI CTCGAG 1 cut(s) 1094
SmiMI CAYNNNNRTG 1 cut(s) 1053
SmlI CTYRAG 2 cut(s) 792, 1094
SmoI CTYRAG 2 cut(s) 792, 1094
SnaBI TACGTA 1 cut(s) 455
SseBI AGGCCT 1 cut(s) 1108
SsiI CCGC 9 cut(s) 310, 312, 512, 651, 654, 736, 922, 1130, 1304
SspMI CTAG 4 cut(s) 27, 47, 68, 195
SstI GAGCTC 1 cut(s) 337
StuI AGGCCT 1 cut(s) 1108
StyD4I CCNGG 2 cut(s) 1070, 1151
StyI CCWWGG 3 cut(s) 356, 823, 1109
TaaI ACNGT 1 cut(s) 15
TaiI ACGT 3 cut(s) 457, 1267, 1348
TaqI TCGA 5 cut(s) 331, 382, 624, 636, 1095
TatI WGTACW 1 cut(s) 579
TauI GCSGC 2 cut(s) 654, 924
TfiI GAWTC 3 cut(s) 384, 405, 1202
Tru1I TTAA 5 cut(s) 140, 612, 936, 1221, 1398
Tru9I TTAA 5 cut(s) 140, 612, 936, 1221, 1398
TscAI CASTG 3 cut(s) 286, 394, 748
TseFI GTSAC 2 cut(s) 482, 827
TseI GCWGC 1 cut(s) 176
Tsp45I GTSAC 2 cut(s) 482, 827
TspDTI ATGAA 4 cut(s) 266, 354, 750, 904
TspGWI ACGGA 1 cut(s) 1099
TspRI CASTG 3 cut(s) 286, 394, 748
Van91I CCANNNNNTGG 1 cut(s) 229
XapI RAATTY 3 cut(s) 347, 1117, 1320
XceI RCATGY 1 cut(s) 1144
XhoI CTCGAG 1 cut(s) 1094
XspI CTAG 4 cut(s) 27, 47, 68, 195
ZrmI AGTACT 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.