Protein of unknown function, DUF604
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12460 |
| fragaria_vesca | FvH4_1g09900 FvH4_3g28523 FvH4_3g28524 |
| malus_domestica | MD03G1172600.v1.1 |
| prunus_persica | Prupe.4G254000_v2.0.a1 Prupe.4G260000_v2.0.a1 |
| pyrus_communis | pycom03g12980 |
| rosa_chinensis | RchiOBHm_Chr5g0052781 RchiOBHm_Chr5g0052791 |
| rosa_laevigata | RLG00000034797 RLG00000034799 |
| rosa_multiflora | Rmu_sc0004335.1_g000002 Rmu_sc0004335.1_g000005 Rmu_sc0010119.1_g000002 Rmu_sc0017126.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00028590 Rroxscaffold_1G00028610 |
| rosa_rugosa | Rorug05G0269900 |
| rosa_samantha | Rh5AG341800 Rh5AG341900 Rh5BG352400 Rh5BG352500 Rh5CG379100 Rh5CG379200 Rh5DG368800 Rh5DG368900 |
| rosa_wichuraiana | Rw5G032220 Rw5G032230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 438 |
| AccB1I | GGYRCC | 1 cut(s) | 855 |
| AccBSI | CCGCTC | 1 cut(s) | 1059 |
| AccII | CGCG | 2 cut(s) | 1243, 1402 |
| AciI | CCGC | 5 cut(s) | 334, 992, 1057, 1400, 1442 |
| AclWI | GGATC | 5 cut(s) | 877, 1094, 1295, 1308, 1337 |
| AcoI | YGGCCR | 1 cut(s) | 398 |
| AcsI | RAATTY | 1 cut(s) | 1481 |
| AcuI | CTGAAG | 2 cut(s) | 366, 852 |
| AcyI | GRCGYC | 1 cut(s) | 435 |
| AdeI | CACNNNGTG | 1 cut(s) | 268 |
| AfaI | GTAC | 5 cut(s) | 140, 455, 483, 634, 1524 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 220, 364, 721, 1441 |
| AflIII | ACRYGT | 2 cut(s) | 227, 1272 |
| AgsI | TTSAA | 9 cut(s) | 96, 117, 301, 498, 590, 1118, 1279, 1389, 1425 |
| AjiI | CACGTC | 1 cut(s) | 230 |
| AjnI | CCWGG | 4 cut(s) | 213, 773, 849, 1283 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1030, 1062 |
| AleI | CACNNNNGTG | 1 cut(s) | 865 |
| AluBI | AGCT | 7 cut(s) | 99, 120, 374, 1088, 1313, 1397, 1532 |
| AluI | AGCT | 7 cut(s) | 99, 120, 374, 1088, 1313, 1397, 1532 |
| Alw21I | GWGCWC | 4 cut(s) | 376, 872, 1214, 1315 |
| Alw26I | GTCTC | 3 cut(s) | 188, 990, 1226 |
| Alw44I | GTGCAC | 1 cut(s) | 868 |
| AlwI | GGATC | 5 cut(s) | 877, 1094, 1295, 1308, 1337 |
| Ama87I | CYCGRG | 1 cut(s) | 1548 |
| AoxI | GGCC | 4 cut(s) | 216, 335, 398, 1223 |
| ApaLI | GTGCAC | 1 cut(s) | 868 |
| ApeKI | GCWGC | 3 cut(s) | 725, 1088, 1529 |
| ApoI | RAATTY | 1 cut(s) | 1481 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 551, 583, 1449, 1481 |
| AspLEI | GCGC | 2 cut(s) | 287, 898 |
| AspS9I | GGNCC | 1 cut(s) | 1224 |
| AsuC2I | CCSGG | 1 cut(s) | 1207 |
| AsuHPI | GGTGA | 4 cut(s) | 533, 839, 1444, 1589 |
| AvaI | CYCGRG | 1 cut(s) | 1548 |
| BaeGI | GKGCMC | 2 cut(s) | 858, 872 |
| BalI | TGGCCA | 1 cut(s) | 400 |
| BamHI | GGATCC | 1 cut(s) | 1300 |
| BanI | GGYRCC | 1 cut(s) | 855 |
| BanII | GRGCYC | 2 cut(s) | 376, 1315 |
| BauI | CACGAG | 1 cut(s) | 1347 |
| BbsI | GAAGAC | 3 cut(s) | 968, 1103, 1370 |
| Bbv12I | GWGCWC | 4 cut(s) | 376, 872, 1214, 1315 |
| BbvI | GCAGC | 3 cut(s) | 737, 1075, 1541 |
| BccI | CCATC | 5 cut(s) | 409, 531, 1019, 1349, 1457 |
| BceAI | ACGGC | 1 cut(s) | 237 |
| BciT130I | CCWGG | 4 cut(s) | 215, 775, 851, 1285 |
| BciVI | GTATCC | 1 cut(s) | 347 |
| BcnI | CCSGG | 1 cut(s) | 1207 |
| BcoDI | GTCTC | 3 cut(s) | 188, 990, 1226 |
| BfaI | CTAG | 5 cut(s) | 86, 107, 441, 596, 615 |
| BfoI | RGCGCY | 2 cut(s) | 288, 899 |
| BfuI | GTATCC | 1 cut(s) | 347 |
| BisI | GCNGC | 4 cut(s) | 335, 726, 1089, 1530 |
| BlsI | GCNGC | 4 cut(s) | 336, 727, 1090, 1531 |
| Bme1390I | CCNGG | 5 cut(s) | 215, 775, 851, 1207, 1285 |
| BmeT110I | CYCGRG | 1 cut(s) | 1548 |
| BmgBI | CACGTC | 1 cut(s) | 230 |
| BmgT120I | GGNCC | 1 cut(s) | 1224 |
| BmiI | GGNNCC | 3 cut(s) | 857, 956, 1302 |
| BmrFI | CCNGG | 5 cut(s) | 215, 775, 851, 1207, 1285 |
| BmsI | GCATC | 1 cut(s) | 937 |
| BpiI | GAAGAC | 3 cut(s) | 968, 1103, 1370 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 342, 374, 1223, 1255 |
| BpuEI | CTTGAG | 1 cut(s) | 275 |
| BpuMI | CCSGG | 1 cut(s) | 1207 |
| BsaBI | GATNNNNATC | 1 cut(s) | 73 |
| BsaHI | GRCGYC | 1 cut(s) | 435 |
| BsaJI | CCNNGG | 5 cut(s) | 219, 395, 850, 1205, 1296 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 220, 364, 721, 1441 |
| Bse1I | ACTGG | 2 cut(s) | 180, 723 |
| Bse8I | GATNNNNATC | 1 cut(s) | 73 |
| BseBI | CCWGG | 4 cut(s) | 215, 775, 851, 1285 |
| BseDI | CCNNGG | 5 cut(s) | 219, 395, 850, 1205, 1296 |
| BseGI | GGATG | 5 cut(s) | 559, 751, 961, 988, 1011 |
| BseJI | GATNNNNATC | 1 cut(s) | 73 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 220, 364, 721, 1441 |
| BseMII | CTCAG | 1 cut(s) | 205 |
| BseNI | ACTGG | 2 cut(s) | 180, 723 |
| BseRI | GAGGAG | 2 cut(s) | 176, 179 |
| BseSI | GKGCMC | 2 cut(s) | 858, 872 |
| BseXI | GCAGC | 3 cut(s) | 737, 1075, 1541 |
| Bsh1236I | CGCG | 2 cut(s) | 1243, 1402 |
| BshFI | GGCC | 4 cut(s) | 218, 337, 400, 1225 |
| BshNI | GGYRCC | 1 cut(s) | 855 |
| BsiHKAI | GWGCWC | 4 cut(s) | 376, 872, 1214, 1315 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1548 |
| BsiSI | CCGG | 1 cut(s) | 1207 |
| BslFI | GGGAC | 2 cut(s) | 216, 855 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 220, 364, 721, 1441 |
| BsmAI | GTCTC | 3 cut(s) | 188, 990, 1226 |
| BsmBI | CGTCTC | 1 cut(s) | 990 |
| BsmFI | GGGAC | 2 cut(s) | 216, 855 |
| BsmI | GAATGC | 1 cut(s) | 683 |
| BsnI | GGCC | 4 cut(s) | 218, 337, 400, 1225 |
| BsoBI | CYCGRG | 1 cut(s) | 1548 |
| Bsp1286I | GDGCHC | 5 cut(s) | 376, 858, 872, 1214, 1315 |
| Bsp1407I | TGTACA | 1 cut(s) | 138 |
| Bsp143I | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| BspACI | CCGC | 5 cut(s) | 334, 992, 1057, 1400, 1442 |
| BspANI | GGCC | 4 cut(s) | 218, 337, 400, 1225 |
| BspCNI | CTCAG | 1 cut(s) | 204 |
| BspFNI | CGCG | 2 cut(s) | 1243, 1402 |
| BspHI | TCATGA | 1 cut(s) | 1080 |
| BspLI | GGNNCC | 3 cut(s) | 857, 956, 1302 |
| BspPI | GGATC | 5 cut(s) | 877, 1094, 1295, 1308, 1337 |
| BspT107I | GGYRCC | 1 cut(s) | 855 |
| BsrBI | CCGCTC | 1 cut(s) | 1059 |
| BsrGI | TGTACA | 1 cut(s) | 138 |
| BsrI | ACTGG | 2 cut(s) | 180, 723 |
| BssECI | CCNNGG | 5 cut(s) | 219, 395, 850, 1205, 1296 |
| BssMI | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| BssNI | GRCGYC | 1 cut(s) | 435 |
| BssSI | CACGAG | 1 cut(s) | 1347 |
| BssT1I | CCWWGG | 2 cut(s) | 395, 1296 |
| Bst2BI | CACGAG | 1 cut(s) | 1347 |
| Bst2UI | CCWGG | 4 cut(s) | 215, 775, 851, 1285 |
| Bst4CI | ACNGT | 2 cut(s) | 1030, 1375 |
| BstACI | GRCGYC | 1 cut(s) | 435 |
| BstAUI | TGTACA | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 1258 |
| BstDEI | CTNAG | 2 cut(s) | 191, 1368 |
| BstDSI | CCRYGG | 1 cut(s) | 219 |
| BstEII | GGTNACC | 1 cut(s) | 1430 |
| BstF5I | GGATG | 5 cut(s) | 559, 751, 961, 988, 1011 |
| BstFNI | CGCG | 2 cut(s) | 1243, 1402 |
| BstH2I | RGCGCY | 2 cut(s) | 288, 899 |
| BstHHI | GCGC | 2 cut(s) | 287, 898 |
| BstKTI | GATC | 5 cut(s) | 273, 885, 1102, 1303, 1345 |
| BstMAI | GTCTC | 3 cut(s) | 188, 990, 1226 |
| BstMBI | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| BstNI | CCWGG | 4 cut(s) | 215, 775, 851, 1285 |
| BstNSI | RCATGY | 2 cut(s) | 1276, 1529 |
| BstPI | GGTNACC | 1 cut(s) | 1430 |
| BstSCI | CCNGG | 5 cut(s) | 213, 773, 849, 1205, 1283 |
| BstSLI | GKGCMC | 2 cut(s) | 858, 872 |
| BstUI | CGCG | 2 cut(s) | 1243, 1402 |
| BstV1I | GCAGC | 3 cut(s) | 737, 1075, 1541 |
| BstV2I | GAAGAC | 3 cut(s) | 968, 1103, 1370 |
| BstX2I | RGATCY | 2 cut(s) | 882, 1300 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1149 |
| BstYI | RGATCY | 2 cut(s) | 882, 1300 |
| BsuI | GTATCC | 1 cut(s) | 347 |
| BsuRI | GGCC | 4 cut(s) | 218, 337, 400, 1225 |
| BtgI | CCRYGG | 1 cut(s) | 219 |
| BtgZI | GCGATG | 1 cut(s) | 1458 |
| BtrI | CACGTC | 1 cut(s) | 230 |
| BtsCI | GGATG | 5 cut(s) | 559, 751, 961, 988, 1011 |
| BtsIMutI | CAGTG | 1 cut(s) | 716 |
| Cac8I | GCNNGC | 1 cut(s) | 1258 |
| CciI | TCATGA | 1 cut(s) | 1080 |
| CfoI | GCGC | 2 cut(s) | 287, 898 |
| Cfr13I | GGNCC | 1 cut(s) | 1224 |
| CsiI | ACCWGGT | 1 cut(s) | 1283 |
| Csp6I | GTAC | 5 cut(s) | 139, 454, 482, 633, 1523 |
| CviQI | GTAC | 5 cut(s) | 139, 454, 482, 633, 1523 |
| DdeI | CTNAG | 2 cut(s) | 191, 1368 |
| DpnI | GATC | 5 cut(s) | 272, 884, 1101, 1302, 1344 |
| DpnII | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| DraIII | CACNNNGTG | 1 cut(s) | 268 |
| EaeI | YGGCCR | 1 cut(s) | 398 |
| Ecl136II | GAGCTC | 2 cut(s) | 374, 1313 |
| Eco130I | CCWWGG | 2 cut(s) | 395, 1296 |
| Eco24I | GRGCYC | 2 cut(s) | 376, 1315 |
| Eco53kI | GAGCTC | 2 cut(s) | 374, 1313 |
| Eco57I | CTGAAG | 2 cut(s) | 366, 852 |
| Eco88I | CYCGRG | 1 cut(s) | 1548 |
| Eco91I | GGTNACC | 1 cut(s) | 1430 |
| EcoICRI | GAGCTC | 2 cut(s) | 374, 1313 |
| EcoO65I | GGTNACC | 1 cut(s) | 1430 |
| EcoRI | GAATTC | 1 cut(s) | 1481 |
| EcoRII | CCWGG | 4 cut(s) | 213, 773, 849, 1283 |
| EcoT14I | CCWWGG | 2 cut(s) | 395, 1296 |
| EcoT22I | ATGCAT | 1 cut(s) | 952 |
| EcoT38I | GRGCYC | 2 cut(s) | 376, 1315 |
| ErhI | CCWWGG | 2 cut(s) | 395, 1296 |
| Esp3I | CGTCTC | 1 cut(s) | 990 |
| FaqI | GGGAC | 2 cut(s) | 216, 855 |
| FauNDI | CATATG | 1 cut(s) | 1127 |
| Fnu4HI | GCNGC | 4 cut(s) | 335, 726, 1089, 1530 |
| FokI | GGATG | 5 cut(s) | 566, 758, 948, 975, 998 |
| FriOI | GRGCYC | 2 cut(s) | 376, 1315 |
| Fsp4HI | GCNGC | 4 cut(s) | 335, 726, 1089, 1530 |
| FspBI | CTAG | 5 cut(s) | 86, 107, 441, 596, 615 |
| GlaI | GCGC | 2 cut(s) | 286, 897 |
| GluI | GCNGC | 4 cut(s) | 335, 726, 1089, 1530 |
| HaeII | RGCGCY | 2 cut(s) | 288, 899 |
| HaeIII | GGCC | 4 cut(s) | 218, 337, 400, 1225 |
| HapII | CCGG | 1 cut(s) | 1207 |
| HhaI | GCGC | 2 cut(s) | 287, 898 |
| Hin1I | GRCGYC | 1 cut(s) | 435 |
| Hin6I | GCGC | 2 cut(s) | 285, 896 |
| HinP1I | GCGC | 2 cut(s) | 285, 896 |
| HincII | GTYRAC | 2 cut(s) | 735, 1033 |
| HindII | GTYRAC | 2 cut(s) | 735, 1033 |
| HindIII | AAGCTT | 2 cut(s) | 97, 118 |
| HinfI | GANTC | 6 cut(s) | 158, 469, 1064, 1334, 1445, 1551 |
| HpaII | CCGG | 1 cut(s) | 1207 |
| HphI | GGTGA | 4 cut(s) | 533, 839, 1444, 1589 |
| Hpy166II | GTNNAC | 4 cut(s) | 454, 735, 870, 1033 |
| Hpy188I | TCNGA | 8 cut(s) | 194, 275, 385, 474, 553, 643, 664, 1063 |
| Hpy188III | TCNNGA | 3 cut(s) | 292, 1081, 1389 |
| Hpy8I | GTNNAC | 4 cut(s) | 454, 735, 870, 1033 |
| HpyAV | CCTTC | 6 cut(s) | 186, 208, 884, 1056, 1113, 1353 |
| HpyCH4III | ACNGT | 2 cut(s) | 1030, 1375 |
| HpyCH4IV | ACGT | 2 cut(s) | 229, 435 |
| HpyCH4V | TGCA | 4 cut(s) | 870, 950, 1091, 1529 |
| HpyF3I | CTNAG | 2 cut(s) | 191, 1368 |
| HpySE526I | ACGT | 2 cut(s) | 229, 435 |
| Hsp92I | GRCGYC | 1 cut(s) | 435 |
| HspAI | GCGC | 2 cut(s) | 285, 896 |
| Kzo9I | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| LmnI | GCTCC | 6 cut(s) | 20, 379, 960, 1209, 1318, 1402 |
| Lsp1109I | GCAGC | 3 cut(s) | 737, 1075, 1541 |
| LweI | GCATC | 1 cut(s) | 937 |
| MabI | ACCWGGT | 1 cut(s) | 1283 |
| MaeI | CTAG | 5 cut(s) | 86, 107, 441, 596, 615 |
| MaeII | ACGT | 2 cut(s) | 229, 435 |
| MaeIII | GTNAC | 7 cut(s) | 436, 521, 710, 1375, 1430, 1514, 1552 |
| MalI | GATC | 5 cut(s) | 272, 884, 1101, 1302, 1344 |
| MbiI | CCGCTC | 1 cut(s) | 1059 |
| MboI | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| MboII | GAAGA | 7 cut(s) | 845, 968, 1033, 1103, 1106, 1375, 1413 |
| MfeI | CAATTG | 1 cut(s) | 1147 |
| MflI | RGATCY | 2 cut(s) | 882, 1300 |
| MhlI | GDGCHC | 5 cut(s) | 376, 858, 872, 1214, 1315 |
| MlsI | TGGCCA | 1 cut(s) | 400 |
| MluNI | TGGCCA | 1 cut(s) | 400 |
| MlyI | GAGTC | 2 cut(s) | 1058, 1560 |
| MmeI | TCCRAC | 3 cut(s) | 531, 723, 1226 |
| Mox20I | TGGCCA | 1 cut(s) | 400 |
| Mph1103I | ATGCAT | 1 cut(s) | 952 |
| MscI | TGGCCA | 1 cut(s) | 400 |
| MslI | CAYNNNNRTG | 4 cut(s) | 569, 865, 970, 1188 |
| Msp20I | TGGCCA | 1 cut(s) | 400 |
| MspA1I | CMGCKG | 1 cut(s) | 1532 |
| MspI | CCGG | 1 cut(s) | 1207 |
| MspR9I | CCNGG | 5 cut(s) | 215, 775, 851, 1207, 1285 |
| MunI | CAATTG | 1 cut(s) | 1147 |
| Mva1269I | GAATGC | 1 cut(s) | 683 |
| MvaI | CCWGG | 4 cut(s) | 215, 775, 851, 1285 |
| MvnI | CGCG | 2 cut(s) | 1243, 1402 |
| NciI | CCSGG | 1 cut(s) | 1207 |
| NdeI | CATATG | 1 cut(s) | 1127 |
| NdeII | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| NlaIV | GGNNCC | 3 cut(s) | 857, 956, 1302 |
| NmuCI | GTSAC | 4 cut(s) | 436, 521, 1514, 1552 |
| NsiI | ATGCAT | 1 cut(s) | 952 |
| NspI | RCATGY | 2 cut(s) | 1276, 1529 |
| OliI | CACNNNNGTG | 1 cut(s) | 865 |
| PaeR7I | CTCGAG | 1 cut(s) | 1548 |
| PagI | TCATGA | 1 cut(s) | 1080 |
| PciI | ACATGT | 1 cut(s) | 1272 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 490 |
| PctI | GAATGC | 1 cut(s) | 683 |
| PfeI | GAWTC | 4 cut(s) | 158, 469, 1334, 1445 |
| PkrI | GCNGC | 4 cut(s) | 336, 727, 1090, 1531 |
| PleI | GAGTC | 2 cut(s) | 1058, 1559 |
| PpsI | GAGTC | 2 cut(s) | 1058, 1559 |
| PscI | ACATGT | 1 cut(s) | 1272 |
| Psp124BI | GAGCTC | 2 cut(s) | 376, 1315 |
| Psp6I | CCWGG | 4 cut(s) | 213, 773, 849, 1283 |
| PspEI | GGTNACC | 1 cut(s) | 1430 |
| PspGI | CCWGG | 4 cut(s) | 213, 773, 849, 1283 |
| PspN4I | GGNNCC | 3 cut(s) | 857, 956, 1302 |
| PspPI | GGNCC | 1 cut(s) | 1224 |
| PspXI | VCTCGAGB | 1 cut(s) | 1548 |
| PsuI | RGATCY | 2 cut(s) | 882, 1300 |
| PvuII | CAGCTG | 1 cut(s) | 1532 |
| RsaI | GTAC | 5 cut(s) | 140, 455, 483, 634, 1524 |
| RsaNI | GTAC | 5 cut(s) | 139, 454, 482, 633, 1523 |
| RseI | CAYNNNNRTG | 4 cut(s) | 569, 865, 970, 1188 |
| SacI | GAGCTC | 2 cut(s) | 376, 1315 |
| SatI | GCNGC | 4 cut(s) | 335, 726, 1089, 1530 |
| Sau3AI | GATC | 5 cut(s) | 270, 882, 1099, 1300, 1342 |
| Sau96I | GGNCC | 1 cut(s) | 1224 |
| SchI | GAGTC | 2 cut(s) | 1058, 1560 |
| ScrFI | CCNGG | 5 cut(s) | 215, 775, 851, 1207, 1285 |
| SduI | GDGCHC | 5 cut(s) | 376, 858, 872, 1214, 1315 |
| SexAI | ACCWGGT | 1 cut(s) | 1283 |
| SfaNI | GCATC | 1 cut(s) | 937 |
| Sfr274I | CTCGAG | 1 cut(s) | 1548 |
| SlaI | CTCGAG | 1 cut(s) | 1548 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 569, 865, 970, 1188 |
| SmlI | CTYRAG | 2 cut(s) | 290, 1548 |
| SmoI | CTYRAG | 2 cut(s) | 290, 1548 |
| SsiI | CCGC | 5 cut(s) | 334, 992, 1057, 1400, 1442 |
| SspMI | CTAG | 5 cut(s) | 86, 107, 441, 596, 615 |
| SstI | GAGCTC | 2 cut(s) | 376, 1315 |
| StyD4I | CCNGG | 5 cut(s) | 213, 773, 849, 1205, 1283 |
| StyI | CCWWGG | 2 cut(s) | 395, 1296 |
| TaaI | ACNGT | 2 cut(s) | 1030, 1375 |
| TaiI | ACGT | 2 cut(s) | 232, 438 |
| TaqI | TCGA | 8 cut(s) | 37, 349, 675, 945, 1023, 1309, 1353, 1549 |
| TatI | WGTACW | 2 cut(s) | 138, 1522 |
| TauI | GCSGC | 1 cut(s) | 337 |
| TfiI | GAWTC | 4 cut(s) | 158, 469, 1334, 1445 |
| TscAI | CASTG | 1 cut(s) | 723 |
| TseFI | GTSAC | 4 cut(s) | 436, 521, 1514, 1552 |
| TseI | GCWGC | 3 cut(s) | 725, 1088, 1529 |
| Tsp45I | GTSAC | 4 cut(s) | 436, 521, 1514, 1552 |
| TspDTI | ATGAA | 6 cut(s) | 660, 756, 1067, 1097, 1206, 1511 |
| TspGWI | ACGGA | 2 cut(s) | 947, 1475 |
| TspRI | CASTG | 1 cut(s) | 723 |
| VneI | GTGCAC | 1 cut(s) | 868 |
| XapI | RAATTY | 1 cut(s) | 1481 |
| XceI | RCATGY | 2 cut(s) | 1276, 1529 |
| XhoI | CTCGAG | 1 cut(s) | 1548 |
| XspI | CTAG | 5 cut(s) | 86, 107, 441, 596, 615 |
| ZraI | GACGTC | 1 cut(s) | 436 |
| Zsp2I | ATGCAT | 1 cut(s) | 952 |