component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G37475 AT5G37475 AT5G37475 |
| fragaria_vesca | FvH4_5g23100 |
| malus_domestica | MD06G1026500.v1.1 MD16G1279500.v1.1 |
| prunus_persica | Prupe.5G027300_v2.0.a1 Prupe.5G027300_v2.0.a1 |
| pyrus_communis | pycom06g02170 pycom16g24980 |
| rosa_chinensis | RchiOBHm_Chr7g0211981 |
| rosa_laevigata | RLG00000002948 |
| rosa_multiflora | Rmu_co8494947.1_g000001 Rmu_sc0017524.1_g000003 Rmu_sc0018807.1_g000003 Rmu_sc0028304.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00247240 |
| rosa_rugosa | Rorug07G0129700 Rorug07G0129700 Rorug07G0129800 Rorug07G0129800 |
| rosa_samantha | Rh7AG262600 |
| rosa_wichuraiana | Rw7G022410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 133, 148, 187 |
| AccBSI | CCGCTC | 1 cut(s) | 646 |
| AciI | CCGC | 1 cut(s) | 644 |
| AclWI | GGATC | 2 cut(s) | 233, 635 |
| AcsI | RAATTY | 1 cut(s) | 24 |
| AcuI | CTGAAG | 1 cut(s) | 464 |
| AgsI | TTSAA | 1 cut(s) | 218 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 292 |
| AhlI | ACTAGT | 1 cut(s) | 598 |
| AjnI | CCWGG | 1 cut(s) | 372 |
| AluBI | AGCT | 5 cut(s) | 32, 155, 191, 595, 626 |
| AluI | AGCT | 5 cut(s) | 32, 155, 191, 595, 626 |
| Alw26I | GTCTC | 1 cut(s) | 451 |
| AlwI | GGATC | 2 cut(s) | 233, 635 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 158 |
| ApeKI | GCWGC | 2 cut(s) | 155, 592 |
| ApoI | RAATTY | 1 cut(s) | 24 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 422 |
| AsuHPI | GGTGA | 1 cut(s) | 335 |
| BbsI | GAAGAC | 2 cut(s) | 431, 578 |
| BbvI | GCAGC | 2 cut(s) | 142, 604 |
| BccI | CCATC | 1 cut(s) | 626 |
| BceAI | ACGGC | 1 cut(s) | 531 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 386, 420 |
| BciT130I | CCWGG | 1 cut(s) | 374 |
| BcoDI | GTCTC | 1 cut(s) | 451 |
| BcuI | ACTAGT | 1 cut(s) | 598 |
| BfaI | CTAG | 3 cut(s) | 236, 315, 599 |
| BfuAI | ACCTGC | 3 cut(s) | 133, 148, 187 |
| BisI | GCNGC | 2 cut(s) | 156, 593 |
| BlsI | GCNGC | 2 cut(s) | 157, 594 |
| Bme1390I | CCNGG | 1 cut(s) | 374 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 292 |
| BmiI | GGNNCC | 2 cut(s) | 138, 168 |
| BmrFI | CCNGG | 1 cut(s) | 374 |
| BmrI | ACTGGG | 1 cut(s) | 19 |
| BmsI | GCATC | 2 cut(s) | 478, 512 |
| BmuI | ACTGGG | 1 cut(s) | 19 |
| BpiI | GAAGAC | 2 cut(s) | 431, 578 |
| BsaAI | YACGTR | 1 cut(s) | 59 |
| BsaJI | CCNNGG | 1 cut(s) | 300 |
| Bse1I | ACTGG | 1 cut(s) | 14 |
| Bse3DI | GCAATG | 1 cut(s) | 243 |
| BseBI | CCWGG | 1 cut(s) | 374 |
| BseDI | CCNNGG | 1 cut(s) | 300 |
| BseGI | GGATG | 3 cut(s) | 22, 88, 619 |
| BseMI | GCAATG | 1 cut(s) | 243 |
| BseMII | CTCAG | 1 cut(s) | 240 |
| BseNI | ACTGG | 1 cut(s) | 14 |
| BseRI | GAGGAG | 1 cut(s) | 120 |
| BseXI | GCAGC | 2 cut(s) | 142, 604 |
| BsiSI | CCGG | 1 cut(s) | 611 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BsmAI | GTCTC | 1 cut(s) | 451 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| Bsp143I | GATC | 2 cut(s) | 238, 640 |
| BspACI | CCGC | 1 cut(s) | 644 |
| BspCNI | CTCAG | 1 cut(s) | 241 |
| BspLI | GGNNCC | 2 cut(s) | 138, 168 |
| BspMI | ACCTGC | 3 cut(s) | 133, 148, 187 |
| BspPI | GGATC | 2 cut(s) | 233, 635 |
| BspQI | GCTCTTC | 1 cut(s) | 39 |
| BsrBI | CCGCTC | 1 cut(s) | 646 |
| BsrDI | GCAATG | 1 cut(s) | 243 |
| BsrI | ACTGG | 1 cut(s) | 14 |
| BssECI | CCNNGG | 1 cut(s) | 300 |
| BssMI | GATC | 2 cut(s) | 238, 640 |
| BssT1I | CCWWGG | 1 cut(s) | 300 |
| Bst2UI | CCWGG | 1 cut(s) | 374 |
| Bst4CI | ACNGT | 3 cut(s) | 214, 309, 462 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstBAI | YACGTR | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 1 cut(s) | 249 |
| BstF5I | GGATG | 3 cut(s) | 22, 88, 619 |
| BstKTI | GATC | 2 cut(s) | 241, 643 |
| BstMAI | GTCTC | 1 cut(s) | 451 |
| BstMBI | GATC | 2 cut(s) | 238, 640 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 164, 188 |
| BstNI | CCWGG | 1 cut(s) | 374 |
| BstSCI | CCNGG | 1 cut(s) | 372 |
| BstSNI | TACGTA | 1 cut(s) | 59 |
| BstV1I | GCAGC | 2 cut(s) | 142, 604 |
| BstV2I | GAAGAC | 2 cut(s) | 431, 578 |
| BstX2I | RGATCY | 1 cut(s) | 238 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 434 |
| BstYI | RGATCY | 1 cut(s) | 238 |
| BtsCI | GGATG | 3 cut(s) | 22, 88, 619 |
| BveI | ACCTGC | 3 cut(s) | 133, 148, 187 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| CaiI | CAGNNNCTG | 1 cut(s) | 158 |
| CviAII | CATG | 1 cut(s) | 105 |
| DdeI | CTNAG | 1 cut(s) | 249 |
| DpnI | GATC | 2 cut(s) | 240, 642 |
| DpnII | GATC | 2 cut(s) | 238, 640 |
| DraI | TTTAAA | 1 cut(s) | 477 |
| DriI | GACNNNNNGTC | 1 cut(s) | 292 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 292 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco105I | TACGTA | 1 cut(s) | 59 |
| Eco130I | CCWWGG | 1 cut(s) | 300 |
| Eco57I | CTGAAG | 1 cut(s) | 464 |
| EcoRII | CCWGG | 1 cut(s) | 372 |
| EcoT14I | CCWWGG | 1 cut(s) | 300 |
| ErhI | CCWWGG | 1 cut(s) | 300 |
| FaeI | CATG | 1 cut(s) | 108 |
| FaiI | YATR | 8 cut(s) | 106, 381, 399, 432, 623, 639, 657, 665 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FatI | CATG | 1 cut(s) | 104 |
| Fnu4HI | GCNGC | 2 cut(s) | 156, 593 |
| FokI | GGATG | 3 cut(s) | 29, 95, 626 |
| Fsp4HI | GCNGC | 2 cut(s) | 156, 593 |
| FspBI | CTAG | 3 cut(s) | 236, 315, 599 |
| GluI | GCNGC | 2 cut(s) | 156, 593 |
| HapII | CCGG | 1 cut(s) | 611 |
| Hin1II | CATG | 1 cut(s) | 108 |
| HinfI | GANTC | 1 cut(s) | 101 |
| HpaII | CCGG | 1 cut(s) | 611 |
| HphI | GGTGA | 1 cut(s) | 335 |
| Hpy166II | GTNNAC | 1 cut(s) | 297 |
| Hpy188I | TCNGA | 2 cut(s) | 361, 444 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| Hpy8I | GTNNAC | 1 cut(s) | 297 |
| Hpy99I | CGWCG | 1 cut(s) | 74 |
| HpyAV | CCTTC | 2 cut(s) | 439, 541 |
| HpyCH4III | ACNGT | 3 cut(s) | 214, 309, 462 |
| HpyCH4IV | ACGT | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 6 cut(s) | 143, 182, 383, 491, 503, 524 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 164, 188 |
| HpyF3I | CTNAG | 1 cut(s) | 249 |
| HpySE526I | ACGT | 1 cut(s) | 58 |
| Hsp92II | CATG | 1 cut(s) | 108 |
| Kzo9I | GATC | 2 cut(s) | 238, 640 |
| LguI | GCTCTTC | 1 cut(s) | 39 |
| LmnI | GCTCC | 3 cut(s) | 133, 172, 482 |
| Lsp1109I | GCAGC | 2 cut(s) | 142, 604 |
| LweI | GCATC | 2 cut(s) | 478, 512 |
| MaeI | CTAG | 3 cut(s) | 236, 315, 599 |
| MaeII | ACGT | 1 cut(s) | 58 |
| MaeIII | GTNAC | 1 cut(s) | 365 |
| MalI | GATC | 2 cut(s) | 240, 642 |
| MbiI | CCGCTC | 1 cut(s) | 646 |
| MboI | GATC | 2 cut(s) | 238, 640 |
| MboII | GAAGA | 8 cut(s) | 26, 86, 290, 431, 498, 544, 583, 595 |
| MfeI | CAATTG | 1 cut(s) | 519 |
| MflI | RGATCY | 1 cut(s) | 238 |
| MluCI | AATT | 3 cut(s) | 24, 343, 519 |
| MlyI | GAGTC | 1 cut(s) | 95 |
| MnlI | CCTC | 4 cut(s) | 7, 103, 141, 314 |
| MroXI | GAANNNNTTC | 1 cut(s) | 422 |
| MseI | TTAA | 2 cut(s) | 96, 476 |
| MspA1I | CMGCKG | 1 cut(s) | 155 |
| MspI | CCGG | 1 cut(s) | 611 |
| MspR9I | CCNGG | 1 cut(s) | 374 |
| MunI | CAATTG | 1 cut(s) | 519 |
| MvaI | CCWGG | 1 cut(s) | 374 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 164, 188 |
| NdeII | GATC | 2 cut(s) | 238, 640 |
| NlaIII | CATG | 1 cut(s) | 108 |
| NlaIV | GGNNCC | 2 cut(s) | 138, 168 |
| NmuCI | GTSAC | 1 cut(s) | 365 |
| PciSI | GCTCTTC | 1 cut(s) | 39 |
| PdmI | GAANNNNTTC | 1 cut(s) | 422 |
| PfoI | TCCNGGA | 1 cut(s) | 372 |
| PkrI | GCNGC | 2 cut(s) | 157, 594 |
| PleI | GAGTC | 1 cut(s) | 95 |
| PpsI | GAGTC | 1 cut(s) | 95 |
| Ppu21I | YACGTR | 1 cut(s) | 59 |
| Psp6I | CCWGG | 1 cut(s) | 372 |
| PspGI | CCWGG | 1 cut(s) | 372 |
| PspN4I | GGNNCC | 2 cut(s) | 138, 168 |
| PstNI | CAGNNNCTG | 1 cut(s) | 158 |
| PsuI | RGATCY | 1 cut(s) | 238 |
| PvuII | CAGCTG | 1 cut(s) | 155 |
| SapI | GCTCTTC | 1 cut(s) | 39 |
| SaqAI | TTAA | 2 cut(s) | 96, 476 |
| SatI | GCNGC | 2 cut(s) | 156, 593 |
| Sau3AI | GATC | 2 cut(s) | 238, 640 |
| SchI | GAGTC | 1 cut(s) | 95 |
| ScrFI | CCNGG | 1 cut(s) | 374 |
| SfaNI | GCATC | 2 cut(s) | 478, 512 |
| SnaBI | TACGTA | 1 cut(s) | 59 |
| SpeI | ACTAGT | 1 cut(s) | 598 |
| Sse9I | AATT | 3 cut(s) | 24, 343, 519 |
| SsiI | CCGC | 1 cut(s) | 644 |
| SspMI | CTAG | 3 cut(s) | 236, 315, 599 |
| StyD4I | CCNGG | 1 cut(s) | 372 |
| StyI | CCWWGG | 1 cut(s) | 300 |
| TaaI | ACNGT | 3 cut(s) | 214, 309, 462 |
| TaiI | ACGT | 1 cut(s) | 61 |
| TaqI | TCGA | 1 cut(s) | 648 |
| TasI | AATT | 3 cut(s) | 24, 343, 519 |
| Tru1I | TTAA | 2 cut(s) | 96, 476 |
| Tru9I | TTAA | 2 cut(s) | 96, 476 |
| TseFI | GTSAC | 1 cut(s) | 365 |
| TseI | GCWGC | 2 cut(s) | 155, 592 |
| Tsp45I | GTSAC | 1 cut(s) | 365 |
| TspDTI | ATGAA | 3 cut(s) | 99, 135, 337 |
| XapI | RAATTY | 1 cut(s) | 24 |
| XmnI | GAANNNNTTC | 1 cut(s) | 422 |
| XspI | CTAG | 3 cut(s) | 236, 315, 599 |