Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009435

Physical Location & Seq

Genomic Coordinates Forward (+)

4380865 .. 4383720

Gene Structure 2856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G039500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 567 bp

ATGGACTACGCCATTCCCTGCAATCCCTGCACTTCTATCTACCGGAAACCCGCACTCAACCGGCAAACCACTTGCCCAAAGAGCTTCGCTTGCCGCTCCAATGTAACCAAATGGCGCATCAAAACGATGTCGGAGCTCCAAACGCCGGTGGGTGTTACCGACCGAGCCGGTAGCTACTCTCCTTCAATTCCCACTCACAAAGTCACCGTTCACGACAGGCAACGAGGTGTCGTCCACCAGTTCCTTGTCCCAGAGGACCAGTACATATTGCACACTGCTGAATCACAGGACATCACTCTTCCATTCGCTTGCAGGCACGGTTGTTGTACTAGCTGTGCTGTACGTGTGAAATCCGGACAACTTAGACAGCCTGAGGCACTAGGGATCTCTGCTGAATTGAAATCAAAGGGGTATGCACTTCTTTGTGTGGGTTATCCATCGTCTGATCTTGAAGTAGAAACACAGGACGAGGATGAGGTGTATTGGCTTCAATTTGGGAGATATTTTGCACGGGGACCAATTGAAAGAGATGATTATGCTTTGGAGTTAGCGATGGGCGATGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00195 map00195

Pfam Domains

Protein Families

Fer2

Protein Analysis

189

Amino Acids

21.13

Weight (kDa)

6.21

Isoelectric Point (pI)

50.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009435)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32550 AT1G32550
fragaria_vesca	FvH4_5g21760 FvH4_5g21760 FvH4_5g21760 FvH4_5g21760
malus_domestica	MD06G1032600.v1.1 MD16G1276600.v1.1
prunus_persica	Prupe.5G039500_v2.0.a1 Prupe.5G039500_v2.0.a1
pyrus_communis	pycom06g02700 pycom16g24590
rosa_chinensis	RchiOBHm_Chr7g0209251
rosa_laevigata	RLG00000003153
rosa_multiflora	Rmu_sc0001701.1_g000014
rosa_roxburghii	Rroxscaffold_3G00249590
rosa_rugosa	Rorug07G0110800
rosa_samantha	Rh7AG244700 Rh7BG240000 Rh7CG260300 Rh7DG251600
rosa_wichuraiana	Rw7G020760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	96
AccIII	TCCGGA	1 cut(s)	353
AciI	CCGC	2 cut(s)	51, 94
AclWI	GGATC	1 cut(s)	392
AfaI	GTAC	3 cut(s)	263, 328, 342
AfiI	CCNNNNNNNGG	1 cut(s)	145
AflIII	ACRYGT	1 cut(s)	343
AgsI	TTSAA	5 cut(s)	186, 400, 452, 491, 524
AluBI	AGCT	4 cut(s)	84, 136, 174, 333
AluI	AGCT	4 cut(s)	84, 136, 174, 333
Alw21I	GWGCWC	1 cut(s)	138
AlwI	GGATC	1 cut(s)	392
Aor13HI	TCCGGA	1 cut(s)	353
AspLEI	GCGC	1 cut(s)	117
AspS9I	GGNCC	2 cut(s)	256, 515
AsuHPI	GGTGA	1 cut(s)	196
AvaII	GGWCC	2 cut(s)	256, 515
AxyI	CCTNAGG	1 cut(s)	372
BanII	GRGCYC	1 cut(s)	138
Bbv12I	GWGCWC	1 cut(s)	138
BccI	CCATC	2 cut(s)	445, 547
BfaI	CTAG	2 cut(s)	330, 380
BisI	GCNGC	1 cut(s)	94
BlsI	GCNGC	1 cut(s)	95
Bme18I	GGWCC	2 cut(s)	256, 515
BmgT120I	GGNCC	2 cut(s)	256, 515
BmiI	GGNNCC	1 cut(s)	516
BmsI	GCATC	1 cut(s)	126
BsaAI	YACGTR	1 cut(s)	344
BsaWI	WCCGGW	2 cut(s)	42, 353
Bsc4I	CCNNNNNNNGG	1 cut(s)	145
Bse118I	RCCGGY	3 cut(s)	60, 145, 167
Bse1I	ACTGG	2 cut(s)	238, 259
Bse21I	CCTNAGG	1 cut(s)	372
BseAI	TCCGGA	1 cut(s)	353
BseGI	GGATG	1 cut(s)	478
BseLI	CCNNNNNNNGG	1 cut(s)	145
BseMII	CTCAG	1 cut(s)	363
BseNI	ACTGG	2 cut(s)	238, 259
BsgI	GTGCAG	1 cut(s)	13
Bsh1285I	CGRYCG	1 cut(s)	163
BsiEI	CGRYCG	1 cut(s)	163
BsiHKAI	GWGCWC	1 cut(s)	138
BsiSI	CCGG	5 cut(s)	43, 61, 146, 168, 354
BslFI	GGGAC	2 cut(s)	233, 528
BslI	CCNNNNNNNGG	1 cut(s)	145
BsmFI	GGGAC	2 cut(s)	233, 528
Bsp1286I	GDGCHC	1 cut(s)	138
Bsp13I	TCCGGA	1 cut(s)	353
Bsp143I	GATC	2 cut(s)	384, 445
BspACI	CCGC	2 cut(s)	51, 94
BspCNI	CTCAG	1 cut(s)	364
BspEI	TCCGGA	1 cut(s)	353
BspLI	GGNNCC	1 cut(s)	516
BspPI	GGATC	1 cut(s)	392
BsrBI	CCGCTC	1 cut(s)	96
BsrFI	RCCGGY	3 cut(s)	60, 145, 167
BsrI	ACTGG	2 cut(s)	238, 259
BssAI	RCCGGY	3 cut(s)	60, 145, 167
BssMI	GATC	2 cut(s)	384, 445
Bst4CI	ACNGT	2 cut(s)	208, 320
Bst6I	CTCTTC	1 cut(s)	303
BstAPI	GCANNNNNTGC	1 cut(s)	27
BstBAI	YACGTR	1 cut(s)	344
BstC8I	GCNNGC	3 cut(s)	91, 310, 314
BstDEI	CTNAG	2 cut(s)	362, 372
BstF5I	GGATG	1 cut(s)	478
BstHHI	GCGC	1 cut(s)	117
BstKTI	GATC	2 cut(s)	387, 448
BstMBI	GATC	2 cut(s)	384, 445
BstMCI	CGRYCG	1 cut(s)	163
BstMWI	GCNNNNNNNGC	4 cut(s)	27, 81, 90, 142
BstX2I	RGATCY	1 cut(s)	384
BstYI	RGATCY	1 cut(s)	384
Bsu36I	CCTNAGG	1 cut(s)	372
BtsCI	GGATG	1 cut(s)	478
BtsI	GCAGTG	1 cut(s)	273
BtsIMutI	CAGTG	1 cut(s)	273
Cac8I	GCNNGC	3 cut(s)	91, 310, 314
CfoI	GCGC	1 cut(s)	117
Cfr10I	RCCGGY	3 cut(s)	60, 145, 167
Cfr13I	GGNCC	2 cut(s)	256, 515
Csp6I	GTAC	3 cut(s)	262, 327, 341
CviJI	RGCY	7 cut(s)	84, 136, 167, 174, 333, 370, 487
CviKI_1	RGCY	7 cut(s)	84, 136, 167, 174, 333, 370, 487
CviQI	GTAC	3 cut(s)	262, 327, 341
DdeI	CTNAG	2 cut(s)	362, 372
DpnI	GATC	2 cut(s)	386, 447
DpnII	GATC	2 cut(s)	384, 445
Eam1104I	CTCTTC	1 cut(s)	303
EarI	CTCTTC	1 cut(s)	303
Ecl136II	GAGCTC	1 cut(s)	136
Eco24I	GRGCYC	1 cut(s)	138
Eco47I	GGWCC	2 cut(s)	256, 515
Eco53kI	GAGCTC	1 cut(s)	136
Eco81I	CCTNAGG	1 cut(s)	372
EcoICRI	GAGCTC	1 cut(s)	136
EcoT38I	GRGCYC	1 cut(s)	138
FaiI	YATR	3 cut(s)	266, 414, 537
FaqI	GGGAC	2 cut(s)	233, 528
FauI	CCCGC	1 cut(s)	58
Fnu4HI	GCNGC	1 cut(s)	94
FokI	GGATG	1 cut(s)	485
FriOI	GRGCYC	1 cut(s)	138
Fsp4HI	GCNGC	1 cut(s)	94
FspBI	CTAG	2 cut(s)	330, 380
GlaI	GCGC	1 cut(s)	116
GluI	GCNGC	1 cut(s)	94
HapII	CCGG	5 cut(s)	43, 61, 146, 168, 354
HhaI	GCGC	1 cut(s)	117
Hin6I	GCGC	1 cut(s)	115
HinP1I	GCGC	1 cut(s)	115
HinfI	GANTC	1 cut(s)	281
HpaII	CCGG	5 cut(s)	43, 61, 146, 168, 354
HphI	GGTGA	1 cut(s)	196
Hpy166II	GTNNAC	2 cut(s)	211, 235
Hpy188I	TCNGA	2 cut(s)	133, 445
Hpy188III	TCNNGA	3 cut(s)	212, 354, 449
Hpy8I	GTNNAC	2 cut(s)	211, 235
HpyAV	CCTTC	1 cut(s)	192
HpyCH4III	ACNGT	2 cut(s)	208, 320
HpyCH4IV	ACGT	1 cut(s)	343
HpyCH4V	TGCA	6 cut(s)	21, 30, 271, 312, 416, 509
HpyF10VI	GCNNNNNNNGC	4 cut(s)	27, 81, 90, 142
HpyF3I	CTNAG	2 cut(s)	362, 372
HpySE526I	ACGT	1 cut(s)	343
HspAI	GCGC	1 cut(s)	115
Kpn2I	TCCGGA	1 cut(s)	353
Kzo9I	GATC	2 cut(s)	384, 445
LmnI	GCTCC	3 cut(s)	101, 133, 141
LweI	GCATC	1 cut(s)	126
MaeI	CTAG	2 cut(s)	330, 380
MaeII	ACGT	1 cut(s)	343
MaeIII	GTNAC	3 cut(s)	103, 154, 202
MalI	GATC	2 cut(s)	386, 447
MbiI	CCGCTC	1 cut(s)	96
MboI	GATC	2 cut(s)	384, 445
MboII	GAAGA	1 cut(s)	290
MfeI	CAATTG	1 cut(s)	519
MflI	RGATCY	1 cut(s)	384
MhlI	GDGCHC	1 cut(s)	138
MluCI	AATT	4 cut(s)	186, 395, 491, 519
MmeI	TCCRAC	1 cut(s)	111
MnlI	CCTC	5 cut(s)	218, 247, 367, 463, 469
MroI	TCCGGA	1 cut(s)	353
MspI	CCGG	5 cut(s)	43, 61, 146, 168, 354
MunI	CAATTG	1 cut(s)	519
MwoI	GCNNNNNNNGC	4 cut(s)	27, 81, 90, 142
NdeII	GATC	2 cut(s)	384, 445
NlaIV	GGNNCC	1 cut(s)	516
NmuCI	GTSAC	1 cut(s)	202
PfeI	GAWTC	1 cut(s)	281
PkrI	GCNGC	1 cut(s)	95
Ppu21I	YACGTR	1 cut(s)	344
Psp124BI	GAGCTC	1 cut(s)	138
PspN4I	GGNNCC	1 cut(s)	516
PspPI	GGNCC	2 cut(s)	256, 515
PsuI	RGATCY	1 cut(s)	384
RsaI	GTAC	3 cut(s)	263, 328, 342
RsaNI	GTAC	3 cut(s)	262, 327, 341
SacI	GAGCTC	1 cut(s)	138
SatI	GCNGC	1 cut(s)	94
Sau3AI	GATC	2 cut(s)	384, 445
Sau96I	GGNCC	2 cut(s)	256, 515
SduI	GDGCHC	1 cut(s)	138
SetI	ASST	7 cut(s)	86, 138, 176, 229, 335, 346, 480
SfaNI	GCATC	1 cut(s)	126
SgrAI	CRCCGGYG	1 cut(s)	145
SinI	GGWCC	2 cut(s)	256, 515
Sse9I	AATT	4 cut(s)	186, 395, 491, 519
SsiI	CCGC	2 cut(s)	51, 94
SspMI	CTAG	2 cut(s)	330, 380
SstI	GAGCTC	1 cut(s)	138
TaaI	ACNGT	2 cut(s)	208, 320
TaiI	ACGT	1 cut(s)	346
TaqII	GACCGA	1 cut(s)	177
TasI	AATT	4 cut(s)	186, 395, 491, 519
TatI	WGTACW	2 cut(s)	261, 326
TauI	GCSGC	1 cut(s)	96
TfiI	GAWTC	1 cut(s)	281
TscAI	CASTG	1 cut(s)	280
TseFI	GTSAC	1 cut(s)	202
Tsp45I	GTSAC	1 cut(s)	202
TspRI	CASTG	1 cut(s)	280
VpaK11BI	GGWCC	2 cut(s)	256, 515
XspI	CTAG	2 cut(s)	330, 380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.