tRNA rRNA methyltransferase (SpoU) family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17610 AT4G17610 AT4G17610 |
| fragaria_vesca | FvH4_5g20370 FvH4_5g20370 FvH4_5g20370 FvH4_5g20370 FvH4_5g20370 |
| malus_domestica | MD04G1055600.v1.1 |
| prunus_persica | Prupe.5G055400_v2.0.a1 Prupe.5G055400_v2.0.a1 |
| pyrus_communis | pycom04g04890 |
| rosa_chinensis | RchiOBHm_Chr7g0205631 |
| rosa_laevigata | RLG00000003369 |
| rosa_multiflora | Rmu_ssc0000482.1_g000025 |
| rosa_roxburghii | Rroxscaffold_3G00252130 |
| rosa_rugosa | Rorug07G0092300 |
| rosa_samantha | Rh7AG223100 Rh7AG230100 Rh7BG218100 Rh7CG236300 Rh7DG230000 |
| rosa_wichuraiana | Rw7G019240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2663, 3722 |
| Acc36I | ACCTGC | 2 cut(s) | 1145, 4210 |
| Acc65I | GGTACC | 1 cut(s) | 487 |
| AccB1I | GGYRCC | 3 cut(s) | 433, 487, 5489 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 4265, 4462 |
| AccBSI | CCGCTC | 1 cut(s) | 32 |
| AccI | GTMKAC | 3 cut(s) | 5, 5401, 5510 |
| AclI | AACGTT | 2 cut(s) | 2649, 5475 |
| AclWI | GGATC | 8 cut(s) | 186, 523, 1930, 2737, 2899, 3961, 4053, 5520 |
| AcoI | YGGCCR | 1 cut(s) | 27 |
| AcuI | CTGAAG | 7 cut(s) | 1935, 2058, 2212, 3119, 3635, 3764, 3846 |
| AcvI | CACGTG | 1 cut(s) | 3899 |
| AcyI | GRCGYC | 1 cut(s) | 5490 |
| AdeI | CACNNNGTG | 1 cut(s) | 1265 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1315, 4188, 4261, 4265, 4462, 4675, 5453 |
| AflII | CTTAAG | 3 cut(s) | 182, 2164, 2249 |
| AflIII | ACRYGT | 1 cut(s) | 5419 |
| AgeI | ACCGGT | 2 cut(s) | 768, 5404 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 720 |
| AhlI | ACTAGT | 1 cut(s) | 4276 |
| AjiI | CACGTC | 2 cut(s) | 3185, 3499 |
| AleI | CACNNNNGTG | 1 cut(s) | 2816 |
| Alw21I | GWGCWC | 8 cut(s) | 247, 1048, 1671, 2445, 2520, 2875, 3604, 4725 |
| Alw26I | GTCTC | 4 cut(s) | 392, 2683, 2960, 3436 |
| Alw44I | GTGCAC | 4 cut(s) | 243, 1667, 2871, 3600 |
| AlwI | GGATC | 8 cut(s) | 186, 523, 1930, 2737, 2899, 3961, 4053, 5520 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1619, 2969, 4462, 5026 |
| Ama87I | CYCGRG | 2 cut(s) | 3292, 4682 |
| AoxI | GGCC | 6 cut(s) | 27, 3397, 3608, 3847, 4307, 5122 |
| ApaLI | GTGCAC | 4 cut(s) | 243, 1667, 2871, 3600 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2419, 2451, 4823, 4855 |
| AseI | ATTAAT | 1 cut(s) | 4236 |
| AsiGI | ACCGGT | 2 cut(s) | 768, 5404 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 878, 4398, 4752, 5270 |
| Asp718I | GGTACC | 1 cut(s) | 487 |
| AspA2I | CCTAGG | 1 cut(s) | 3713 |
| AspLEI | GCGC | 4 cut(s) | 337, 4318, 4590, 5492 |
| AspS9I | GGNCC | 9 cut(s) | 771, 1637, 2467, 2777, 3397, 3608, 3848, 5344, 5377 |
| AsuC2I | CCSGG | 1 cut(s) | 4670 |
| AsuHPI | GGTGA | 4 cut(s) | 2488, 3806, 3948, 4424 |
| AsuNHI | GCTAGC | 1 cut(s) | 3928 |
| AvaI | CYCGRG | 2 cut(s) | 3292, 4682 |
| AvaII | GGWCC | 6 cut(s) | 771, 1637, 2467, 2777, 5344, 5377 |
| AvrII | CCTAGG | 1 cut(s) | 3713 |
| AxyI | CCTNAGG | 1 cut(s) | 4311 |
| BaeGI | GKGCMC | 4 cut(s) | 247, 1671, 2875, 3604 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4088, 4121 |
| BanI | GGYRCC | 3 cut(s) | 433, 487, 5489 |
| BanII | GRGCYC | 3 cut(s) | 1048, 2445, 2520 |
| BauI | CACGAG | 1 cut(s) | 4985 |
| BbrPI | CACGTG | 1 cut(s) | 3899 |
| BbsI | GAAGAC | 5 cut(s) | 102, 2030, 2331, 3474, 3537 |
| Bbv12I | GWGCWC | 8 cut(s) | 247, 1048, 1671, 2445, 2520, 2875, 3604, 4725 |
| BccI | CCATC | 7 cut(s) | 188, 261, 1639, 2725, 2846, 3303, 3437 |
| BceAI | ACGGC | 3 cut(s) | 74, 1231, 4763 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1143, 1177 |
| BclI | TGATCA | 2 cut(s) | 1557, 1785 |
| BcnI | CCSGG | 1 cut(s) | 4670 |
| BcoDI | GTCTC | 4 cut(s) | 392, 2683, 2960, 3436 |
| BcuI | ACTAGT | 1 cut(s) | 4276 |
| BfmI | CTRYAG | 4 cut(s) | 4186, 4203, 4624, 5027 |
| BfoI | RGCGCY | 2 cut(s) | 4319, 5493 |
| BfrI | CTTAAG | 3 cut(s) | 182, 2164, 2249 |
| BfuAI | ACCTGC | 2 cut(s) | 1145, 4210 |
| BglII | AGATCT | 2 cut(s) | 4805, 5465 |
| BlnI | CCTAGG | 1 cut(s) | 3713 |
| BmcAI | AGTACT | 2 cut(s) | 2233, 3728 |
| Bme18I | GGWCC | 6 cut(s) | 771, 1637, 2467, 2777, 5344, 5377 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 720 |
| BmeT110I | CYCGRG | 2 cut(s) | 3292, 4682 |
| BmgBI | CACGTC | 2 cut(s) | 3185, 3499 |
| BmgT120I | GGNCC | 9 cut(s) | 771, 1637, 2467, 2777, 3397, 3608, 3848, 5344, 5377 |
| BmiI | GGNNCC | 6 cut(s) | 435, 489, 1638, 2161, 5235, 5491 |
| BmrI | ACTGGG | 2 cut(s) | 4450, 5246 |
| BmtI | GCTAGC | 1 cut(s) | 3932 |
| BmuI | ACTGGG | 2 cut(s) | 4450, 5246 |
| BpiI | GAAGAC | 5 cut(s) | 102, 2030, 2331, 3474, 3537 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2663, 2695 |
| BpmI | CTGGAG | 6 cut(s) | 1470, 2504, 2534, 2934, 2991, 3290 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1806, 5019 |
| BpuMI | CCSGG | 1 cut(s) | 4670 |
| Bsa29I | ATCGAT | 2 cut(s) | 39, 2598 |
| BsaAI | YACGTR | 2 cut(s) | 3899, 4100 |
| BsaBI | GATNNNNATC | 1 cut(s) | 210 |
| BsaHI | GRCGYC | 1 cut(s) | 5490 |
| BsaI | GGTCTC | 1 cut(s) | 2683 |
| BsaWI | WCCGGW | 3 cut(s) | 768, 2815, 5404 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2797, 2827, 3156, 3186 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1315, 4188, 4261, 4265, 4462, 4675, 5453 |
| Bse118I | RCCGGY | 3 cut(s) | 768, 2790, 5404 |
| Bse21I | CCTNAGG | 1 cut(s) | 4311 |
| Bse3DI | GCAATG | 3 cut(s) | 1115, 1966, 5493 |
| Bse8I | GATNNNNATC | 1 cut(s) | 210 |
| BseCI | ATCGAT | 2 cut(s) | 39, 2598 |
| BseGI | GGATG | 8 cut(s) | 204, 653, 1773, 2338, 2490, 3216, 3457, 5434 |
| BseJI | GATNNNNATC | 1 cut(s) | 210 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1315, 4188, 4261, 4265, 4462, 4675, 5453 |
| BseMI | GCAATG | 3 cut(s) | 1115, 1966, 5493 |
| BseMII | CTCAG | 8 cut(s) | 165, 672, 2535, 3319, 3388, 3849, 4325, 5033 |
| BseRI | GAGGAG | 5 cut(s) | 121, 782, 1193, 1693, 3033 |
| BseSI | GKGCMC | 4 cut(s) | 247, 1671, 2875, 3604 |
| BseYI | CCCAGC | 2 cut(s) | 3347, 4869 |
| BsgI | GTGCAG | 2 cut(s) | 1743, 3207 |
| BshFI | GGCC | 6 cut(s) | 29, 3399, 3610, 3849, 4309, 5124 |
| BshNI | GGYRCC | 3 cut(s) | 433, 487, 5489 |
| BshTI | ACCGGT | 2 cut(s) | 768, 5404 |
| BshVI | ATCGAT | 2 cut(s) | 39, 2598 |
| BsiHKAI | GWGCWC | 8 cut(s) | 247, 1048, 1671, 2445, 2520, 2875, 3604, 4725 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3292, 4682 |
| BsiSI | CCGG | 5 cut(s) | 769, 2791, 2816, 4669, 5405 |
| BslFI | GGGAC | 6 cut(s) | 946, 1076, 1150, 3642, 5234, 5325 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1315, 4188, 4261, 4265, 4462, 4675, 5453 |
| BsmAI | GTCTC | 4 cut(s) | 392, 2683, 2960, 3436 |
| BsmFI | GGGAC | 6 cut(s) | 946, 1076, 1150, 3642, 5234, 5325 |
| BsmI | GAATGC | 5 cut(s) | 1001, 1765, 1856, 3349, 3556 |
| BsnI | GGCC | 6 cut(s) | 29, 3399, 3610, 3849, 4309, 5124 |
| Bso31I | GGTCTC | 1 cut(s) | 2683 |
| BsoBI | CYCGRG | 2 cut(s) | 3292, 4682 |
| Bsp1286I | GDGCHC | 8 cut(s) | 247, 1048, 1671, 2445, 2520, 2875, 3604, 4725 |
| Bsp1407I | TGTACA | 2 cut(s) | 986, 4826 |
| Bsp19I | CCATGG | 1 cut(s) | 2135 |
| BspANI | GGCC | 6 cut(s) | 29, 3399, 3610, 3849, 4309, 5124 |
| BspCNI | CTCAG | 8 cut(s) | 166, 671, 2536, 3318, 3387, 3850, 4324, 5032 |
| BspDI | ATCGAT | 2 cut(s) | 39, 2598 |
| BspHI | TCATGA | 5 cut(s) | 280, 1531, 2260, 2437, 3811 |
| BspLI | GGNNCC | 6 cut(s) | 435, 489, 1638, 2161, 5235, 5491 |
| BspMAI | CTGCAG | 2 cut(s) | 4207, 5031 |
| BspMI | ACCTGC | 2 cut(s) | 1145, 4210 |
| BspOI | GCTAGC | 1 cut(s) | 3932 |
| BspPI | GGATC | 8 cut(s) | 186, 523, 1930, 2737, 2899, 3961, 4053, 5520 |
| BspT107I | GGYRCC | 3 cut(s) | 433, 487, 5489 |
| BspTI | CTTAAG | 3 cut(s) | 182, 2164, 2249 |
| BspTNI | GGTCTC | 1 cut(s) | 2683 |
| BsrBI | CCGCTC | 1 cut(s) | 32 |
| BsrDI | GCAATG | 3 cut(s) | 1115, 1966, 5493 |
| BsrFI | RCCGGY | 3 cut(s) | 768, 2790, 5404 |
| BsrGI | TGTACA | 2 cut(s) | 986, 4826 |
| BssAI | RCCGGY | 3 cut(s) | 768, 2790, 5404 |
| BssNAI | GTATAC | 2 cut(s) | 5402, 5511 |
| BssNI | GRCGYC | 1 cut(s) | 5490 |
| BssSI | CACGAG | 1 cut(s) | 4985 |
| BssT1I | CCWWGG | 4 cut(s) | 2135, 3117, 3713, 5380 |
| Bst1107I | GTATAC | 2 cut(s) | 5402, 5511 |
| Bst2BI | CACGAG | 1 cut(s) | 4985 |
| Bst6I | CTCTTC | 5 cut(s) | 934, 1344, 2664, 4327, 4529 |
| BstACI | GRCGYC | 1 cut(s) | 5490 |
| BstAFI | CTTAAG | 3 cut(s) | 182, 2164, 2249 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1117, 1802, 3530, 4775 |
| BstAUI | TGTACA | 2 cut(s) | 986, 4826 |
| BstBAI | YACGTR | 2 cut(s) | 3899, 4100 |
| BstC8I | GCNNGC | 8 cut(s) | 2383, 2826, 3584, 3930, 4442, 5065, 5122, 5434 |
| BstDSI | CCRYGG | 2 cut(s) | 2135, 2887 |
| BstF5I | GGATG | 8 cut(s) | 204, 653, 1773, 2338, 2490, 3216, 3457, 5434 |
| BstH2I | RGCGCY | 2 cut(s) | 4319, 5493 |
| BstHHI | GCGC | 4 cut(s) | 337, 4318, 4590, 5492 |
| BstMAI | GTCTC | 4 cut(s) | 392, 2683, 2960, 3436 |
| BstNSI | RCATGY | 4 cut(s) | 2091, 2385, 3586, 5423 |
| BstSFI | CTRYAG | 4 cut(s) | 4186, 4203, 4624, 5027 |
| BstSLI | GKGCMC | 4 cut(s) | 247, 1671, 2875, 3604 |
| BstV2I | GAAGAC | 5 cut(s) | 102, 2030, 2331, 3474, 3537 |
| BstX2I | RGATCY | 6 cut(s) | 178, 515, 4045, 4805, 5465, 5525 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2731 |
| BstYI | RGATCY | 6 cut(s) | 178, 515, 4045, 4805, 5465, 5525 |
| BstZ17I | GTATAC | 2 cut(s) | 5402, 5511 |
| Bsu15I | ATCGAT | 2 cut(s) | 39, 2598 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4311 |
| BsuRI | GGCC | 6 cut(s) | 29, 3399, 3610, 3849, 4309, 5124 |
| BsuTUI | ATCGAT | 2 cut(s) | 39, 2598 |
| BtgI | CCRYGG | 2 cut(s) | 2135, 2887 |
| BtrI | CACGTC | 2 cut(s) | 3185, 3499 |
| BtsCI | GGATG | 8 cut(s) | 204, 653, 1773, 2338, 2490, 3216, 3457, 5434 |
| BtsI | GCAGTG | 1 cut(s) | 1383 |
| BveI | ACCTGC | 2 cut(s) | 1145, 4210 |
| Cac8I | GCNNGC | 8 cut(s) | 2383, 2826, 3584, 3930, 4442, 5065, 5122, 5434 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1619, 2969, 4462, 5026 |
| CciI | TCATGA | 5 cut(s) | 280, 1531, 2260, 2437, 3811 |
| CfoI | GCGC | 4 cut(s) | 337, 4318, 4590, 5492 |
| Cfr10I | RCCGGY | 3 cut(s) | 768, 2790, 5404 |
| Cfr13I | GGNCC | 9 cut(s) | 771, 1637, 2467, 2777, 3397, 3608, 3848, 5344, 5377 |
| ClaI | ATCGAT | 2 cut(s) | 39, 2598 |
| CseI | GACGC | 1 cut(s) | 3018 |
| CsiI | ACCWGGT | 1 cut(s) | 363 |
| CspAI | ACCGGT | 2 cut(s) | 768, 5404 |
| DinI | GGCGCC | 1 cut(s) | 5491 |
| DraI | TTTAAA | 3 cut(s) | 2881, 3253, 4734 |
| DraIII | CACNNNGTG | 1 cut(s) | 1265 |
| DriI | GACNNNNNGTC | 1 cut(s) | 720 |
| EaeI | YGGCCR | 1 cut(s) | 27 |
| Eam1104I | CTCTTC | 5 cut(s) | 934, 1344, 2664, 4327, 4529 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 720 |
| EarI | CTCTTC | 5 cut(s) | 934, 1344, 2664, 4327, 4529 |
| Ecl136II | GAGCTC | 3 cut(s) | 1046, 2443, 2518 |
| Eco130I | CCWWGG | 4 cut(s) | 2135, 3117, 3713, 5380 |
| Eco24I | GRGCYC | 3 cut(s) | 1048, 2445, 2520 |
| Eco31I | GGTCTC | 1 cut(s) | 2683 |
| Eco32I | GATATC | 3 cut(s) | 496, 4613, 5413 |
| Eco47I | GGWCC | 6 cut(s) | 771, 1637, 2467, 2777, 5344, 5377 |
| Eco53kI | GAGCTC | 3 cut(s) | 1046, 2443, 2518 |
| Eco57I | CTGAAG | 7 cut(s) | 1935, 2058, 2212, 3119, 3635, 3764, 3846 |
| Eco72I | CACGTG | 1 cut(s) | 3899 |
| Eco81I | CCTNAGG | 1 cut(s) | 4311 |
| Eco88I | CYCGRG | 2 cut(s) | 3292, 4682 |
| EcoICRI | GAGCTC | 3 cut(s) | 1046, 2443, 2518 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2777, 3848 |
| EcoRI | GAATTC | 3 cut(s) | 1384, 2141, 2924 |
| EcoRV | GATATC | 3 cut(s) | 496, 4613, 5413 |
| EcoT14I | CCWWGG | 4 cut(s) | 2135, 3117, 3713, 5380 |
| EcoT22I | ATGCAT | 4 cut(s) | 1856, 2338, 3588, 4363 |
| EcoT38I | GRGCYC | 3 cut(s) | 1048, 2445, 2520 |
| EgeI | GGCGCC | 1 cut(s) | 5491 |
| EheI | GGCGCC | 1 cut(s) | 5491 |
| ErhI | CCWWGG | 4 cut(s) | 2135, 3117, 3713, 5380 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 931, 963, 2172, 2204, 4526, 4558 |
| FaqI | GGGAC | 6 cut(s) | 946, 1076, 1150, 3642, 5234, 5325 |
| FauI | CCCGC | 2 cut(s) | 1756, 4645 |
| FauNDI | CATATG | 2 cut(s) | 1122, 2995 |
| FbaI | TGATCA | 2 cut(s) | 1557, 1785 |
| FblI | GTMKAC | 3 cut(s) | 5, 5401, 5510 |
| FokI | GGATG | 8 cut(s) | 211, 640, 1780, 2345, 2477, 3223, 3464, 5441 |
| FriOI | GRGCYC | 3 cut(s) | 1048, 2445, 2520 |
| GlaI | GCGC | 4 cut(s) | 336, 4317, 4589, 5491 |
| GsaI | CCCAGC | 2 cut(s) | 3351, 4873 |
| GsuI | CTGGAG | 6 cut(s) | 1470, 2504, 2534, 2934, 2991, 3290 |
| HaeII | RGCGCY | 2 cut(s) | 4319, 5493 |
| HaeIII | GGCC | 6 cut(s) | 29, 3399, 3610, 3849, 4309, 5124 |
| HapII | CCGG | 5 cut(s) | 769, 2791, 2816, 4669, 5405 |
| HgaI | GACGC | 1 cut(s) | 3018 |
| HhaI | GCGC | 4 cut(s) | 337, 4318, 4590, 5492 |
| Hin1I | GRCGYC | 1 cut(s) | 5490 |
| Hin6I | GCGC | 4 cut(s) | 335, 4316, 4588, 5490 |
| HinP1I | GCGC | 4 cut(s) | 335, 4316, 4588, 5490 |
| HincII | GTYRAC | 2 cut(s) | 2786, 4666 |
| HindII | GTYRAC | 2 cut(s) | 2786, 4666 |
| HindIII | AAGCTT | 3 cut(s) | 2243, 3048, 5009 |
| HpaI | GTTAAC | 1 cut(s) | 4666 |
| HpaII | CCGG | 5 cut(s) | 769, 2791, 2816, 4669, 5405 |
| HphI | GGTGA | 4 cut(s) | 2488, 3806, 3948, 4424 |
| Hpy99I | CGWCG | 2 cut(s) | 568, 3186 |
| HpyCH4IV | ACGT | 7 cut(s) | 2649, 3184, 3498, 3898, 4099, 4129, 5475 |
| HpySE526I | ACGT | 7 cut(s) | 2649, 3184, 3498, 3898, 4099, 4129, 5475 |
| Hsp92I | GRCGYC | 1 cut(s) | 5490 |
| HspAI | GCGC | 4 cut(s) | 335, 4316, 4588, 5490 |
| KasI | GGCGCC | 1 cut(s) | 5489 |
| KpnI | GGTACC | 1 cut(s) | 491 |
| Ksp22I | TGATCA | 2 cut(s) | 1557, 1785 |
| KspAI | GTTAAC | 1 cut(s) | 4666 |
| LmnI | GCTCC | 9 cut(s) | 1451, 2515, 2523, 2972, 3013, 3739, 4057, 4270, 4714 |
| MabI | ACCWGGT | 1 cut(s) | 363 |
| MaeII | ACGT | 7 cut(s) | 2649, 3184, 3498, 3898, 4099, 4129, 5475 |
| MbiI | CCGCTC | 1 cut(s) | 32 |
| MfeI | CAATTG | 3 cut(s) | 1713, 2399, 3093 |
| MflI | RGATCY | 6 cut(s) | 178, 515, 4045, 4805, 5465, 5525 |
| MhlI | GDGCHC | 8 cut(s) | 247, 1048, 1671, 2445, 2520, 2875, 3604, 4725 |
| Mly113I | GGCGCC | 1 cut(s) | 5490 |
| MlyI | GAGTC | 3 cut(s) | 137, 3172, 4496 |
| MmeI | TCCRAC | 4 cut(s) | 183, 2445, 3142, 5227 |
| Mph1103I | ATGCAT | 4 cut(s) | 1856, 2338, 3588, 4363 |
| MroXI | GAANNNNTTC | 4 cut(s) | 878, 4398, 4752, 5270 |
| MspA1I | CMGCKG | 4 cut(s) | 80, 4873, 5048, 5487 |
| MspCI | CTTAAG | 3 cut(s) | 182, 2164, 2249 |
| MspI | CCGG | 5 cut(s) | 769, 2791, 2816, 4669, 5405 |
| MunI | CAATTG | 3 cut(s) | 1713, 2399, 3093 |
| Mva1269I | GAATGC | 5 cut(s) | 1001, 1765, 1856, 3349, 3556 |
| NarI | GGCGCC | 1 cut(s) | 5490 |
| NciI | CCSGG | 1 cut(s) | 4670 |
| NcoI | CCATGG | 1 cut(s) | 2135 |
| NdeI | CATATG | 2 cut(s) | 1122, 2995 |
| NheI | GCTAGC | 1 cut(s) | 3928 |
| NlaIV | GGNNCC | 6 cut(s) | 435, 489, 1638, 2161, 5235, 5491 |
| NmeAIII | GCCGAG | 1 cut(s) | 3433 |
| NmuCI | GTSAC | 8 cut(s) | 576, 1257, 1444, 2288, 3753, 4125, 4780, 5215 |
| NsiI | ATGCAT | 4 cut(s) | 1856, 2338, 3588, 4363 |
| NspI | RCATGY | 4 cut(s) | 2091, 2385, 3586, 5423 |
| OliI | CACNNNNGTG | 1 cut(s) | 2816 |
| PaeI | GCATGC | 2 cut(s) | 2385, 3586 |
| PaeR7I | CTCGAG | 1 cut(s) | 4682 |
| PagI | TCATGA | 5 cut(s) | 280, 1531, 2260, 2437, 3811 |
| PciI | ACATGT | 1 cut(s) | 5419 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 1525, 3181, 4992, 5001 |
| PctI | GAATGC | 5 cut(s) | 1001, 1765, 1856, 3349, 3556 |
| PdmI | GAANNNNTTC | 4 cut(s) | 878, 4398, 4752, 5270 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 4265, 4462 |
| PfoI | TCCNGGA | 1 cut(s) | 2058 |
| PinAI | ACCGGT | 2 cut(s) | 768, 5404 |
| PleI | GAGTC | 3 cut(s) | 137, 3172, 4496 |
| PluTI | GGCGCC | 1 cut(s) | 5493 |
| PmaCI | CACGTG | 1 cut(s) | 3899 |
| PmlI | CACGTG | 1 cut(s) | 3899 |
| PpsI | GAGTC | 3 cut(s) | 137, 3172, 4496 |
| Ppu21I | YACGTR | 2 cut(s) | 3899, 4100 |
| PpuMI | RGGWCCY | 1 cut(s) | 2777 |
| PscI | ACATGT | 1 cut(s) | 5419 |
| PshBI | ATTAAT | 1 cut(s) | 4236 |
| PsiI | TTATAA | 2 cut(s) | 2663, 3722 |
| Psp124BI | GAGCTC | 3 cut(s) | 1048, 2445, 2520 |
| Psp1406I | AACGTT | 2 cut(s) | 2649, 5475 |
| Psp5II | RGGWCCY | 1 cut(s) | 2777 |
| PspCI | CACGTG | 1 cut(s) | 3899 |
| PspFI | CCCAGC | 2 cut(s) | 3347, 4869 |
| PspN4I | GGNNCC | 6 cut(s) | 435, 489, 1638, 2161, 5235, 5491 |
| PspPI | GGNCC | 9 cut(s) | 771, 1637, 2467, 2777, 3397, 3608, 3848, 5344, 5377 |
| PspPPI | RGGWCCY | 1 cut(s) | 2777 |
| PspXI | VCTCGAGB | 1 cut(s) | 4682 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1614, 1646, 4235, 4267 |
| PstI | CTGCAG | 2 cut(s) | 4207, 5031 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1619, 2969, 4462, 5026 |
| PsuI | RGATCY | 6 cut(s) | 178, 515, 4045, 4805, 5465, 5525 |
| PvuII | CAGCTG | 1 cut(s) | 4873 |
| SacI | GAGCTC | 3 cut(s) | 1048, 2445, 2520 |
| Sau96I | GGNCC | 9 cut(s) | 771, 1637, 2467, 2777, 3397, 3608, 3848, 5344, 5377 |
| ScaI | AGTACT | 2 cut(s) | 2233, 3728 |
| SchI | GAGTC | 3 cut(s) | 137, 3172, 4496 |
| SduI | GDGCHC | 8 cut(s) | 247, 1048, 1671, 2445, 2520, 2875, 3604, 4725 |
| SexAI | ACCWGGT | 1 cut(s) | 363 |
| SfcI | CTRYAG | 4 cut(s) | 4186, 4203, 4624, 5027 |
| SfoI | GGCGCC | 1 cut(s) | 5491 |
| Sfr274I | CTCGAG | 1 cut(s) | 4682 |
| SinI | GGWCC | 6 cut(s) | 771, 1637, 2467, 2777, 5344, 5377 |
| SlaI | CTCGAG | 1 cut(s) | 4682 |
| SpeI | ACTAGT | 1 cut(s) | 4276 |
| SphI | GCATGC | 2 cut(s) | 2385, 3586 |
| SspDI | GGCGCC | 1 cut(s) | 5489 |
| SspI | AATATT | 2 cut(s) | 1432, 4005 |
| SstI | GAGCTC | 3 cut(s) | 1048, 2445, 2520 |
| StyI | CCWWGG | 4 cut(s) | 2135, 3117, 3713, 5380 |
| TaiI | ACGT | 7 cut(s) | 2652, 3187, 3501, 3901, 4102, 4132, 5478 |
| TaqI | TCGA | 9 cut(s) | 39, 396, 1879, 2041, 2598, 3181, 4683, 4995, 5244 |
| TatI | WGTACW | 9 cut(s) | 955, 986, 1327, 2231, 3726, 4071, 4242, 4826, 5185 |
| TauI | GCSGC | 5 cut(s) | 32, 80, 653, 4309, 5490 |
| TseFI | GTSAC | 8 cut(s) | 576, 1257, 1444, 2288, 3753, 4125, 4780, 5215 |
| Tsp45I | GTSAC | 8 cut(s) | 576, 1257, 1444, 2288, 3753, 4125, 4780, 5215 |
| TspGWI | ACGGA | 3 cut(s) | 1156, 2904, 3190 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 4265, 4462 |
| Vha464I | CTTAAG | 3 cut(s) | 182, 2164, 2249 |
| VneI | GTGCAC | 4 cut(s) | 243, 1667, 2871, 3600 |
| VpaK11BI | GGWCC | 6 cut(s) | 771, 1637, 2467, 2777, 5344, 5377 |
| VspI | ATTAAT | 1 cut(s) | 4236 |
| XbaI | TCTAGA | 2 cut(s) | 4021, 5033 |
| XceI | RCATGY | 4 cut(s) | 2091, 2385, 3586, 5423 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1679, 4442 |
| XhoI | CTCGAG | 1 cut(s) | 4682 |
| XmaJI | CCTAGG | 1 cut(s) | 3713 |
| XmiI | GTMKAC | 3 cut(s) | 5, 5401, 5510 |
| XmnI | GAANNNNTTC | 4 cut(s) | 878, 4398, 4752, 5270 |
| ZrmI | AGTACT | 2 cut(s) | 2233, 3728 |
| Zsp2I | ATGCAT | 4 cut(s) | 1856, 2338, 3588, 4363 |