Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Reverse (-)

7220931 .. 7229743

Gene Structure 8813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0092300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGGAAACTGCTGCTCCGATGACGCCGGCGGCCAGACGGCCGTCGGCGGCACCGCCGCTTCTCACGGCAATCCCAACGACGCTCACAACGACGCCGTCGATCACCTCCTCAAGACCCGCGGCTACCACGGCCTCTTCTCTCAGATCGAGTTATCCTTGGCTGCTATAGACTTGCGTGATCGGGACGTGCTCTCGAAGAGTGATCCCATGGTGGTCGTATATACAAAAGGAAGAGATGGAGGGCTTGTAGAGCTTGGCCGCACTGAAGTAGTTCTAAATTCATTAAATCCGAAATGGATCACAAAGCATAATGTCACTTATCATTTTGAGGTCGTACAGACTTTGGTGTTTCGCGTGTATGATGTCGATACTCAGTTTCACAATGTGGAAGTGAAGATGCTTAAGCTAGATGAGCAACAATTTCTTGGCGAGGCAACTTGTGCATTGTCGGAGATAGTTGCAAAATCAGACAGATTATTAACCCTGGATCTTGTATATAGAGAGGAATCGAGCAGATCAAACCGTGGAAAGCTCATTGTGCATGCTGAGGAGTCTGTTAGCTCAAAGACAACAATTGAGATGAGTTTGAGGTGTTTAGATTTGGAATACAAGGATCTCTTCTCGAAAAGTGACCCTTTTTTGGTAATATCGAAAATTGCGGATAGTGGGATCACAATTCCAGTTTGCAAAACAGAAGTCATAAAGAACGAACTCAAACCTGCATGGAAGCCAATATATTTGAATATTCAACAAGTTGGAAGCAAGGACAGCCCCTTGATAATAGAGTGTTTTAACTTCAACAGCAATGGCAAACATGATTTGATTGGAAAAGCTCAAAAATCACTGGCTGACCTGGAAAAGCTTCATACTAGTGGACAAGGAGAAAATTTATTTATACCTGCTGGGCATGATCACCACAACAAGACACTGAAGAGTCAACTATTTGTGGACAAGTTTACTGAGAGTGTTCAACACACGTTCCTTGATTACTTGGCTGGGGGCTGTGAATTAAATTTCATGGTGGCTGTTGATTTTACAGCTTCAAATGGGAACCCTCGCCTGCCCGATTCTTTGCATTATATAGATCCTTCAGGAAGAACAAATGCATACCAGAGAGCAATCATTGAGGTTGTGGAGGTGTTGCAGTTTTATGATTCAGACAAGCGCTTTCCAGCCTGGGGATTTGGAGCCCGACCAATCGATGGTCCAGTTTCTCATTGCTTCAACTTGAATGGGAGTAGTCATCACTGTGAGGTTGAAGGAATCCAAGGAATTATGGTGGCATATTCAAGTGCCCTCCAAAATGTTTCTCTTGCCGGACCAACTCTTTTTGGACCCATAATCACTAATGCTGCATCAATTGCCAGCCAGTCTCTTGCGAATGGTGGACAAAAATACTTCGTTTTGTTAATAATCACGGATGGAGTAGTCACAGATCTCCAAGAAACCAAAGATGCCCTCGTGAAAGCATCTGACCTGCCATTGTCAATCCTCATTGTTGGAGTAGGAGGAGCTGACTTCAAAGAAATGGAGATTTTGGATGCTGACAAGGGTGACAGGCTTGAAAGTACGACTGGGCGTGTTGCTTCACGTGATATAGTGCAGTTTGTTCCATTCCGAGATGTACAAAGTGGAGAAATTTCCGTTGTTCAGGCGCTTTTAGCAGAATTACCATCTCAGTTTCTGACTTACATGCGATCCAGAAATATTAAACCAAATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000451 GO:0000453 GO:0001510 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008173 GO:0008175 GO:0008649 GO:0008757 GO:0009451 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016072 GO:0016423 GO:0016435 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0022613 GO:0030488 GO:0031167 GO:0031323 GO:0031326 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070039 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:0140102 GO:1901360 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SpoU_methylase

Protein Analysis

574

Amino Acids

63.03

Weight (kDa)

5.47

Isoelectric Point (pI)

32.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	54 - 156	4.8e-11	C2 domain
C2	PF00168	196 - 287	5.2e-11	C2 domain
Copine	PF07002	357 - 572	1.2e-82	Copine

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	727, 907, 1485
AccB1I	GGYRCC	1 cut(s)	50
AccB7I	CCANNNNNTGG	1 cut(s)	1202
AccII	CGCG	2 cut(s)	120, 354
AciI	CCGC	8 cut(s)	30, 48, 54, 57, 118, 120, 259, 659
AclWI	GGATC	7 cut(s)	197, 305, 495, 621, 677, 1079, 1692
AcoI	YGGCCR	3 cut(s)	31, 39, 256
AcsI	RAATTY	5 cut(s)	277, 886, 1012, 1638, 1717
AcuI	CTGAAG	3 cut(s)	285, 950, 1074
AcvI	CACGTG	1 cut(s)	1592
AcyI	GRCGYC	2 cut(s)	24, 93
AdeI	CACNNNGTG	1 cut(s)	385
AfaI	GTAC	3 cut(s)	336, 1570, 1626
AfeI	AGCGCT	1 cut(s)	1166
AfiI	CCNNNNNNNGG	3 cut(s)	640, 1178, 1202
AflII	CTTAAG	1 cut(s)	401
AflIII	ACRYGT	1 cut(s)	975
AhlI	ACTAGT	1 cut(s)	869
AjiI	CACGTC	1 cut(s)	187
AjnI	CCWGG	3 cut(s)	483, 852, 1175
AluBI	AGCT	8 cut(s)	253, 406, 532, 561, 833, 862, 1040, 1514
AluI	AGCT	8 cut(s)	253, 406, 532, 561, 833, 862, 1040, 1514
Alw21I	GWGCWC	1 cut(s)	192
Alw26I	GTCTC	1 cut(s)	1377
AlwI	GGATC	7 cut(s)	197, 305, 495, 621, 677, 1079, 1692
AlwNI	CAGNNNCTG	1 cut(s)	1684
Aor51HI	AGCGCT	1 cut(s)	1166
AoxI	GGCC	4 cut(s)	31, 39, 130, 256
ApeKI	GCWGC	3 cut(s)	12, 161, 1352
ApoI	RAATTY	5 cut(s)	277, 886, 1012, 1638, 1717
ArsI	GACNNNNNNTTYG	2 cut(s)	681, 713
Asp700I	GAANNNNTTC	2 cut(s)	270, 861
AspLEI	GCGC	2 cut(s)	1167, 1657
AspS9I	GGNCC	3 cut(s)	1205, 1319, 1334
AsuHPI	GGTGA	3 cut(s)	95, 905, 1565
AvaII	GGWCC	3 cut(s)	1205, 1319, 1334
BaeGI	GKGCMC	1 cut(s)	1297
BanI	GGYRCC	1 cut(s)	50
BanII	GRGCYC	1 cut(s)	1192
BauI	CACGAG	1 cut(s)	1460
BbrPI	CACGTG	1 cut(s)	1592
Bbv12I	GWGCWC	1 cut(s)	192
BbvCI	CCTCAGC	1 cut(s)	546
BbvI	GCAGC	2 cut(s)	148, 1339
BccI	CCATC	4 cut(s)	230, 1196, 1415, 1681
BceAI	ACGGC	5 cut(s)	26, 54, 80, 82, 145
BciT130I	CCWGG	3 cut(s)	485, 854, 1177
BclI	TGATCA	1 cut(s)	910
BcoDI	GTCTC	1 cut(s)	1377
BcuI	ACTAGT	1 cut(s)	869
BfaI	CTAG	2 cut(s)	407, 870
BfmI	CTRYAG	1 cut(s)	165
BfoI	RGCGCY	2 cut(s)	1168, 1658
BfrI	CTTAAG	1 cut(s)	401
BfuAI	ACCTGC	3 cut(s)	727, 907, 1485
BglII	AGATCT	1 cut(s)	1435
BisI	GCNGC	8 cut(s)	13, 31, 49, 57, 121, 162, 259, 1353
BlsI	GCNGC	8 cut(s)	14, 32, 50, 58, 122, 163, 260, 1354
Bme1390I	CCNGG	3 cut(s)	485, 854, 1177
Bme18I	GGWCC	3 cut(s)	1205, 1319, 1334
BmgBI	CACGTC	1 cut(s)	187
BmgT120I	GGNCC	3 cut(s)	1205, 1319, 1334
BmiI	GGNNCC	4 cut(s)	52, 1052, 1189, 1336
BmrFI	CCNGG	3 cut(s)	485, 854, 1177
BmrI	ACTGGG	1 cut(s)	1584
BmsI	GCATC	5 cut(s)	387, 1364, 1444, 1478, 1531
BmuI	ACTGGG	1 cut(s)	1584
BoxI	GACNNNNGTC	1 cut(s)	41
Bpu10I	CCTNAGC	1 cut(s)	546
BpuEI	CTTGAG	1 cut(s)	95
Bsa29I	ATCGAT	1 cut(s)	1200
BsaAI	YACGTR	1 cut(s)	1592
BsaHI	GRCGYC	2 cut(s)	24, 93
BsaJI	CCNNGG	8 cut(s)	118, 127, 156, 207, 483, 523, 1176, 1267
BsaXI	ACNNNNNCTCC	3 cut(s)	29, 231, 261
Bsc4I	CCNNNNNNNGG	3 cut(s)	640, 1178, 1202
Bse118I	RCCGGY	1 cut(s)	26
Bse1I	ACTGG	5 cut(s)	680, 849, 1208, 1369, 1579
Bse3DI	GCAATG	2 cut(s)	811, 1216
BseBI	CCWGG	3 cut(s)	485, 854, 1177
BseCI	ATCGAT	1 cut(s)	1200
BseDI	CCNNGG	8 cut(s)	118, 127, 156, 207, 483, 523, 1176, 1267
BseGI	GGATG	2 cut(s)	1426, 1546
BseLI	CCNNNNNNNGG	3 cut(s)	640, 1178, 1202
BseMI	GCAATG	2 cut(s)	811, 1216
BseMII	CTCAG	5 cut(s)	155, 386, 537, 951, 1691
BseNI	ACTGG	5 cut(s)	680, 849, 1208, 1369, 1579
BseRI	GAGGAG	3 cut(s)	98, 563, 1524
BseSI	GKGCMC	1 cut(s)	1297
BseX3I	CGGCCG	1 cut(s)	39
BseXI	GCAGC	2 cut(s)	148, 1339
BseYI	CCCAGC	2 cut(s)	902, 995
BsgI	GTGCAG	1 cut(s)	1622
Bsh1236I	CGCG	2 cut(s)	120, 354
Bsh1285I	CGRYCG	1 cut(s)	42
BshFI	GGCC	4 cut(s)	33, 41, 132, 258
BshNI	GGYRCC	1 cut(s)	50
BshVI	ATCGAT	1 cut(s)	1200
BsiEI	CGRYCG	1 cut(s)	42
BsiHKAI	GWGCWC	1 cut(s)	192
BsiSI	CCGG	2 cut(s)	27, 1317
BslFI	GGGAC	1 cut(s)	197
BslI	CCNNNNNNNGG	3 cut(s)	640, 1178, 1202
BsmAI	GTCTC	1 cut(s)	1377
BsmFI	GGGAC	1 cut(s)	197
BsnI	GGCC	4 cut(s)	33, 41, 132, 258
Bsp1286I	GDGCHC	3 cut(s)	192, 1192, 1297
Bsp1407I	TGTACA	1 cut(s)	1624
Bsp19I	CCATGG	1 cut(s)	207
BspACI	CCGC	8 cut(s)	30, 48, 54, 57, 118, 120, 259, 659
BspANI	GGCC	4 cut(s)	33, 41, 132, 258
BspCNI	CTCAG	5 cut(s)	154, 385, 538, 952, 1690
BspDI	ATCGAT	1 cut(s)	1200
BspFNI	CGCG	2 cut(s)	120, 354
BspLI	GGNNCC	4 cut(s)	52, 1052, 1189, 1336
BspMI	ACCTGC	3 cut(s)	727, 907, 1485
BspPI	GGATC	7 cut(s)	197, 305, 495, 621, 677, 1079, 1692
BspT107I	GGYRCC	1 cut(s)	50
BspTI	CTTAAG	1 cut(s)	401
BsrDI	GCAATG	2 cut(s)	811, 1216
BsrFI	RCCGGY	1 cut(s)	26
BsrGI	TGTACA	1 cut(s)	1624
BsrI	ACTGG	5 cut(s)	680, 849, 1208, 1369, 1579
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	8 cut(s)	118, 127, 156, 207, 483, 523, 1176, 1267
BssNI	GRCGYC	2 cut(s)	24, 93
BssSI	CACGAG	1 cut(s)	1460
BssT1I	CCWWGG	3 cut(s)	156, 207, 1267
Bst2BI	CACGAG	1 cut(s)	1460
Bst2UI	CCWGG	3 cut(s)	485, 854, 1177
Bst4CI	ACNGT	2 cut(s)	524, 1250
Bst6I	CTCTTC	5 cut(s)	140, 191, 226, 623, 926
BstACI	GRCGYC	2 cut(s)	24, 93
BstAFI	CTTAAG	1 cut(s)	401
BstAPI	GCANNNNNTGC	2 cut(s)	440, 1361
BstAUI	TGTACA	1 cut(s)	1624
BstBAI	YACGTR	1 cut(s)	1592
BstC8I	GCNNGC	4 cut(s)	28, 543, 1061, 1366
BstDEI	CTNAG	5 cut(s)	141, 372, 546, 960, 1677
BstDSI	CCRYGG	4 cut(s)	118, 127, 207, 523
BstF5I	GGATG	2 cut(s)	1426, 1546
BstFNI	CGCG	2 cut(s)	120, 354
BstH2I	RGCGCY	2 cut(s)	1168, 1658
BstHHI	GCGC	2 cut(s)	1167, 1657
BstMAI	GTCTC	1 cut(s)	1377
BstMCI	CGRYCG	1 cut(s)	42
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 250, 412, 440, 538, 768, 1361, 1661
BstNI	CCWGG	3 cut(s)	485, 854, 1177
BstNSI	RCATGY	2 cut(s)	545, 1696
BstPAI	GACNNNNGTC	1 cut(s)	41
BstSCI	CCNGG	3 cut(s)	483, 852, 1175
BstSFI	CTRYAG	1 cut(s)	165
BstSLI	GKGCMC	1 cut(s)	1297
BstUI	CGCG	2 cut(s)	120, 354
BstV1I	GCAGC	2 cut(s)	148, 1339
BstX2I	RGATCY	4 cut(s)	487, 613, 1084, 1435
BstYI	RGATCY	4 cut(s)	487, 613, 1084, 1435
BstZI	CGGCCG	1 cut(s)	39
Bsu15I	ATCGAT	1 cut(s)	1200
BsuRI	GGCC	4 cut(s)	33, 41, 132, 258
BsuTUI	ATCGAT	1 cut(s)	1200
BtgI	CCRYGG	4 cut(s)	118, 127, 207, 523
BtrI	CACGTC	1 cut(s)	187
BtsCI	GGATG	2 cut(s)	1426, 1546
BtsIMutI	CAGTG	4 cut(s)	261, 842, 926, 1246
BveI	ACCTGC	3 cut(s)	727, 907, 1485
Cac8I	GCNNGC	4 cut(s)	28, 543, 1061, 1366
CaiI	CAGNNNCTG	1 cut(s)	1684
CfoI	GCGC	2 cut(s)	1167, 1657
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	3 cut(s)	1205, 1319, 1334
Cfr42I	CCGCGG	1 cut(s)	121
ClaI	ATCGAT	1 cut(s)	1200
CseI	GACGC	3 cut(s)	32, 89, 101
Csp6I	GTAC	3 cut(s)	335, 1569, 1625
CviAII	CATG	7 cut(s)	208, 542, 723, 815, 908, 1018, 1693
CviQI	GTAC	3 cut(s)	335, 1569, 1625
DdeI	CTNAG	5 cut(s)	141, 372, 546, 960, 1677
DraIII	CACNNNGTG	1 cut(s)	385
EaeI	YGGCCR	3 cut(s)	31, 39, 256
EagI	CGGCCG	1 cut(s)	39
Eam1104I	CTCTTC	5 cut(s)	140, 191, 226, 623, 926
EarI	CTCTTC	5 cut(s)	140, 191, 226, 623, 926
EclXI	CGGCCG	1 cut(s)	39
Eco130I	CCWWGG	3 cut(s)	156, 207, 1267
Eco24I	GRGCYC	1 cut(s)	1192
Eco47I	GGWCC	3 cut(s)	1205, 1319, 1334
Eco47III	AGCGCT	1 cut(s)	1166
Eco52I	CGGCCG	1 cut(s)	39
Eco57I	CTGAAG	3 cut(s)	285, 950, 1074
Eco72I	CACGTG	1 cut(s)	1592
EcoRII	CCWGG	3 cut(s)	483, 852, 1175
EcoT14I	CCWWGG	3 cut(s)	156, 207, 1267
EcoT22I	ATGCAT	1 cut(s)	1108
EcoT38I	GRGCYC	1 cut(s)	1192
ErhI	CCWWGG	3 cut(s)	156, 207, 1267
FaeI	CATG	7 cut(s)	211, 545, 726, 818, 911, 1021, 1696
FalI	AAGNNNNNCTT	4 cut(s)	602, 634, 619, 651
FaqI	GGGAC	1 cut(s)	197
FatI	CATG	7 cut(s)	207, 541, 722, 814, 907, 1017, 1692
FauI	CCCGC	1 cut(s)	125
FbaI	TGATCA	1 cut(s)	910
Fnu4HI	GCNGC	8 cut(s)	13, 31, 49, 57, 121, 162, 259, 1353
FokI	GGATG	2 cut(s)	1433, 1553
FriOI	GRGCYC	1 cut(s)	1192
Fsp4HI	GCNGC	8 cut(s)	13, 31, 49, 57, 121, 162, 259, 1353
FspBI	CTAG	2 cut(s)	407, 870
GlaI	GCGC	2 cut(s)	1166, 1656
GluI	GCNGC	8 cut(s)	13, 31, 49, 57, 121, 162, 259, 1353
GsaI	CCCAGC	2 cut(s)	906, 999
HaeII	RGCGCY	2 cut(s)	1168, 1658
HaeIII	GGCC	4 cut(s)	33, 41, 132, 258
HapII	CCGG	2 cut(s)	27, 1317
HgaI	GACGC	3 cut(s)	32, 89, 101
HhaI	GCGC	2 cut(s)	1167, 1657
Hin1I	GRCGYC	2 cut(s)	24, 93
Hin1II	CATG	7 cut(s)	211, 545, 726, 818, 911, 1021, 1696
Hin6I	GCGC	2 cut(s)	1165, 1655
HinP1I	GCGC	2 cut(s)	1165, 1655
HincII	GTYRAC	1 cut(s)	938
HindII	GTYRAC	1 cut(s)	938
HindIII	AAGCTT	1 cut(s)	860
HinfI	GANTC	6 cut(s)	506, 551, 934, 1067, 1154, 1263
HpaII	CCGG	2 cut(s)	27, 1317
HphI	GGTGA	3 cut(s)	95, 905, 1565
Hpy166II	GTNNAC	5 cut(s)	875, 938, 949, 957, 1388
Hpy188I	TCNGA	9 cut(s)	19, 144, 291, 451, 469, 1159, 1474, 1619, 1686
Hpy188III	TCNNGA	7 cut(s)	112, 182, 193, 622, 1092, 1462, 1701
Hpy8I	GTNNAC	5 cut(s)	875, 938, 949, 957, 1388
Hpy99I	CGWCG	4 cut(s)	47, 83, 95, 101
HpyAV	CCTTC	2 cut(s)	1098, 1253
HpyCH4III	ACNGT	2 cut(s)	524, 1250
HpyCH4IV	ACGT	3 cut(s)	186, 977, 1591
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 250, 412, 440, 538, 768, 1361, 1661
HpyF3I	CTNAG	5 cut(s)	141, 372, 546, 960, 1677
HpySE526I	ACGT	3 cut(s)	186, 977, 1591
Hsp92I	GRCGYC	2 cut(s)	24, 93
Hsp92II	CATG	7 cut(s)	211, 545, 726, 818, 911, 1021, 1696
HspAI	GCGC	2 cut(s)	1165, 1655
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Ksp22I	TGATCA	1 cut(s)	910
KspI	CCGCGG	1 cut(s)	121
LmnI	GCTCC	3 cut(s)	20, 1187, 1511
Lsp1109I	GCAGC	2 cut(s)	148, 1339
LweI	GCATC	5 cut(s)	387, 1364, 1444, 1478, 1531
MaeI	CTAG	2 cut(s)	407, 870
MaeII	ACGT	3 cut(s)	186, 977, 1591
MaeIII	GTNAC	4 cut(s)	313, 629, 1429, 1553
MboII	GAAGA	7 cut(s)	127, 208, 243, 406, 610, 943, 1107
MfeI	CAATTG	2 cut(s)	573, 1359
MflI	RGATCY	4 cut(s)	487, 613, 1084, 1435
MhlI	GDGCHC	3 cut(s)	192, 1192, 1297
MlyI	GAGTC	2 cut(s)	560, 943
MmeI	TCCRAC	3 cut(s)	429, 736, 1480
Mph1103I	ATGCAT	1 cut(s)	1108
MreI	CGCCGGCG	1 cut(s)	26
MroNI	GCCGGC	1 cut(s)	26
MroXI	GAANNNNTTC	2 cut(s)	270, 861
MseI	TTAA	7 cut(s)	284, 402, 479, 792, 1010, 1409, 1710
MslI	CAYNNNNRTG	2 cut(s)	870, 1248
MspA1I	CMGCKG	1 cut(s)	120
MspCI	CTTAAG	1 cut(s)	401
MspI	CCGG	2 cut(s)	27, 1317
MspR9I	CCNGG	3 cut(s)	485, 854, 1177
MunI	CAATTG	2 cut(s)	573, 1359
MvaI	CCWGG	3 cut(s)	485, 854, 1177
MvnI	CGCG	2 cut(s)	120, 354
MwoI	GCNNNNNNNGC	8 cut(s)	129, 250, 412, 440, 538, 768, 1361, 1661
NaeI	GCCGGC	1 cut(s)	28
NcoI	CCATGG	1 cut(s)	207
NgoMIV	GCCGGC	1 cut(s)	26
NlaIII	CATG	7 cut(s)	211, 545, 726, 818, 911, 1021, 1696
NlaIV	GGNNCC	4 cut(s)	52, 1052, 1189, 1336
NmuCI	GTSAC	4 cut(s)	313, 629, 1429, 1553
NsiI	ATGCAT	1 cut(s)	1108
NspI	RCATGY	2 cut(s)	545, 1696
PaeI	GCATGC	1 cut(s)	545
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 96
PdiI	GCCGGC	1 cut(s)	28
PdmI	GAANNNNTTC	2 cut(s)	270, 861
PfeI	GAWTC	4 cut(s)	506, 1067, 1154, 1263
PflFI	GACNNNGTC	1 cut(s)	95
PflMI	CCANNNNNTGG	1 cut(s)	1202
PkrI	GCNGC	8 cut(s)	14, 32, 50, 58, 122, 163, 260, 1354
PleI	GAGTC	2 cut(s)	559, 942
PmaCI	CACGTG	1 cut(s)	1592
PmlI	CACGTG	1 cut(s)	1592
PpsI	GAGTC	2 cut(s)	559, 942
Ppu21I	YACGTR	1 cut(s)	1592
PshAI	GACNNNNGTC	1 cut(s)	41
Psp6I	CCWGG	3 cut(s)	483, 852, 1175
PspCI	CACGTG	1 cut(s)	1592
PspFI	CCCAGC	2 cut(s)	902, 995
PspGI	CCWGG	3 cut(s)	483, 852, 1175
PspN4I	GGNNCC	4 cut(s)	52, 1052, 1189, 1336
PspPI	GGNCC	3 cut(s)	1205, 1319, 1334
PstNI	CAGNNNCTG	1 cut(s)	1684
PsuI	RGATCY	4 cut(s)	487, 613, 1084, 1435
PsyI	GACNNNGTC	1 cut(s)	95
RsaI	GTAC	3 cut(s)	336, 1570, 1626
RsaNI	GTAC	3 cut(s)	335, 1569, 1625
RseI	CAYNNNNRTG	2 cut(s)	870, 1248
SacII	CCGCGG	1 cut(s)	121
SaqAI	TTAA	7 cut(s)	284, 402, 479, 792, 1010, 1409, 1710
SatI	GCNGC	8 cut(s)	13, 31, 49, 57, 121, 162, 259, 1353
Sau96I	GGNCC	3 cut(s)	1205, 1319, 1334
SchI	GAGTC	2 cut(s)	560, 943
ScrFI	CCNGG	3 cut(s)	485, 854, 1177
SduI	GDGCHC	3 cut(s)	192, 1192, 1297
SfaNI	GCATC	5 cut(s)	387, 1364, 1444, 1478, 1531
SfcI	CTRYAG	1 cut(s)	165
Sfr303I	CCGCGG	1 cut(s)	121
SgrAI	CRCCGGYG	1 cut(s)	26
SgrBI	CCGCGG	1 cut(s)	121
SinI	GGWCC	3 cut(s)	1205, 1319, 1334
SmiMI	CAYNNNNRTG	2 cut(s)	870, 1248
SmlI	CTYRAG	2 cut(s)	110, 401
SmoI	CTYRAG	2 cut(s)	110, 401
SpeI	ACTAGT	1 cut(s)	869
SphI	GCATGC	1 cut(s)	545
SsiI	CCGC	8 cut(s)	30, 48, 54, 57, 118, 120, 259, 659
SspI	AATATT	2 cut(s)	745, 1708
SspMI	CTAG	2 cut(s)	407, 870
StyD4I	CCNGG	3 cut(s)	483, 852, 1175
StyI	CCWWGG	3 cut(s)	156, 207, 1267
TaaI	ACNGT	2 cut(s)	524, 1250
TaiI	ACGT	3 cut(s)	189, 980, 1594
TaqI	TCGA	8 cut(s)	99, 147, 194, 366, 509, 623, 650, 1200
TatI	WGTACW	1 cut(s)	1624
TauI	GCSGC	5 cut(s)	33, 51, 59, 123, 261
TfiI	GAWTC	4 cut(s)	506, 1067, 1154, 1263
Tru1I	TTAA	7 cut(s)	284, 402, 479, 792, 1010, 1409, 1710
Tru9I	TTAA	7 cut(s)	284, 402, 479, 792, 1010, 1409, 1710
TscAI	CASTG	4 cut(s)	268, 849, 933, 1253
TseFI	GTSAC	4 cut(s)	313, 629, 1429, 1553
TseI	GCWGC	3 cut(s)	12, 161, 1352
Tsp45I	GTSAC	4 cut(s)	313, 629, 1429, 1553
TspDTI	ATGAA	3 cut(s)	270, 854, 1006
TspGWI	ACGGA	2 cut(s)	1433, 1633
TspRI	CASTG	4 cut(s)	268, 849, 933, 1253
Tth111I	GACNNNGTC	1 cut(s)	95
Van91I	CCANNNNNTGG	1 cut(s)	1202
Vha464I	CTTAAG	1 cut(s)	401
VpaK11BI	GGWCC	3 cut(s)	1205, 1319, 1334
XapI	RAATTY	5 cut(s)	277, 886, 1012, 1638, 1717
XceI	RCATGY	2 cut(s)	545, 1696
XmnI	GAANNNNTTC	2 cut(s)	270, 861
XspI	CTAG	2 cut(s)	407, 870
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.