Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Forward (+)

47488887 .. 47492797

Gene Structure 3911 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029718

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGAGAGCCATGGGTCGTCTTTCTCTAGCCCCCGGACCTACCTCCGAGCTCTGTGTGAGACTCCGGCCCGTCTGGCTCGCCGTGCCGTTTCAGTCTCAACCTCCTACGAGGAAATGAGTGCGGTCCGCGCCCGGTCCGGCTCCGACATGGAGAAGAGCCTTGGCTGGCTCGACCTGGTTGGGTTCGGCGTAGGCGGCATGGTCGGTGCCGGAGTGTTCGTCACCACCGGCCGTGCAAGTCGGCTGTATGCGGGTCCATCTGTGGTGCTATCGTATGCCATTGCCGGACTCTGCGCCCTTCTCTCCGCCTTCTGCTACACTGAGTTTGCCGTCGACATGCCAGTCGCAGGCGGTGCCTTTAGCTATCTCCGGGTCACATTTGGTGAATTTGCGGCGTTTTTGACTGGAGCCAACTTGGTGATGGACTATGTGATGTCGAACGCCGCCGTTGCAAGGGGTTTCACGGCTTACTTGGGCACCGCAATTGGGGTCCCCGCTGCAAAATGGAGGTTCACGGTGGCCGGACTCCCCAATGGTTTCAATGAAATCGACGTCGTTGCTGTTGTGGTGGTTTTAGCAATTACGCTCATTATCTGCTGCAGTACAAGGGAGAGCTCGGTGGTCAATATGGTGTTGACGGCGCTGCATATAATATTCATATTATTCGTCATAGTAGTTGGGTTGTGCAAAGGCGACTGGAACAACTTCACTGAACCGGGCGACCCGACGCATCCATCCGGGTTTTTTCCGTACGGGGTTTCTGGCGTCTTTAATGGGGCGAGCATGGTTTATCTCAGCTATATCGGATACGACGCCGTTTCGACCATGGCGGAAGAGGTCCGCAACCCCGTCAAGGACATTCCTATCGGAGTATCCGGGTCCGTCCTCATCGTCACTGTTCTTTACTGTTTGATGGCCGCGTCCATGTCCAAACTGCTTCCATACGATATGATCGATCCGGAGGCACCGTTCTCTGCGGCGTTCGGAGGGAAATGGGAGTCGAGAGTGATCGGAGTGGGGGCCGCGCTGGGAATTCTGACGTCGCTATTGGTGGCGATGCTGGGGCAGGCGAGGTACATGTGTGTCATCGGACGATCGAGTGTGGTCCCCGCATGGTTCGCGAGGGTCCACCCCAAGACATCCACGCCTATTAACTCCTCCGCTTTTCTCGGTATCTTGACTGCAGCAATTTCTCTTTTCACTGATCTGAATGTCCTTCTCAATCTTGTATCCATTGGCACACTCTTTGTCTTTTACATGGTCGCCAATGCTGTGATTTTTAGGCGCTACGTTGTGGTGGGGAGGACAAAACCATGGCCTACAATATCATTCCTGTGCTCATTTTCTCTCACAGCTATCATCTTCTCGGTCATTTGGCAAATTGCCCCAGAGGGAAGAACCAAAGCCTTGATGCTTTGTGTTACTGCAGTAATTGCAGCTTCAATCGTACAAACTTTCCATTGCATGGTTAAACAAGCACGAAAACCCGAGTTTTGGGGTGTGCCTTTGATGCCATGGATGCCATCTGTCTCCATTTTCTTGAACATATTTCTGTTGGGGTCATTGGACAGACCATCCTATGTGAGATTTGGATACTTTTCAGGTTTTGCGGTGCTTGTATATGTTTTCTACAGTGTTCATGCTAGCTTTGATGCGCAAGGAAATGGGTCTTTCACTCAGAAGAATGGTGAAATTCACGTAGAGTCTGCAGAGGAAAGTAATGATCCAGGTCTTAAAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

581

Amino Acids

62.29

Weight (kDa)

8.21

Isoelectric Point (pI)

35.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	54 - 474	2.3e-55	Amino acid permease
AA_permease	PF00324	62 - 434	5.6e-30	Amino acid permease
AA_permease_C	PF13906	499 - 549	4.4e-13	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	341
AatII	GACGTC	2 cut(s)	555, 1043
Acc16I	TGCGCA	1 cut(s)	1656
AccB1I	GGYRCC	4 cut(s)	206, 353, 476, 964
AccB7I	CCANNNNNTGG	1 cut(s)	1465
AccI	GTMKAC	1 cut(s)	333
AccII	CGCG	4 cut(s)	129, 920, 1025, 1121
AccIII	TCCGGA	1 cut(s)	958
AclWI	GGATC	2 cut(s)	950, 1718
AcoI	YGGCCR	3 cut(s)	229, 519, 915
AcsI	RAATTY	3 cut(s)	386, 1032, 1692
AcyI	GRCGYC	4 cut(s)	552, 765, 813, 1040
AfaI	GTAC	4 cut(s)	604, 752, 1076, 1449
AfiI	CCNNNNNNNGG	6 cut(s)	347, 453, 486, 853, 1465, 1494
AflIII	ACRYGT	1 cut(s)	1077
AgsI	TTSAA	3 cut(s)	541, 1443, 1543
AjnI	CCWGG	2 cut(s)	174, 1726
AloI	GAACNNNNNNTCC	2 cut(s)	953, 985
AluBI	AGCT	7 cut(s)	50, 363, 615, 798, 1355, 1439, 1647
AluI	AGCT	7 cut(s)	50, 363, 615, 798, 1355, 1439, 1647
Alw21I	GWGCWC	3 cut(s)	52, 617, 1340
Alw26I	GTCTC	3 cut(s)	53, 100, 1534
AlwI	GGATC	2 cut(s)	950, 1718
Ama87I	CYCGRG	1 cut(s)	1487
Aor13HI	TCCGGA	1 cut(s)	958
AoxI	GGCC	6 cut(s)	66, 229, 519, 915, 1020, 1316
ApeKI	GCWGC	5 cut(s)	497, 597, 643, 1184, 1436
ApoI	RAATTY	3 cut(s)	386, 1032, 1692
Asp700I	GAANNNNTTC	1 cut(s)	704
AspLEI	GCGC	6 cut(s)	131, 296, 643, 1027, 1287, 1657
AsuC2I	CCSGG	6 cut(s)	34, 133, 371, 717, 739, 877
AsuHPI	GGTGA	4 cut(s)	214, 395, 430, 1700
AsuNHI	GCTAGC	1 cut(s)	1643
AvaI	CYCGRG	1 cut(s)	1487
AvaII	GGWCC	9 cut(s)	36, 124, 135, 254, 490, 838, 879, 1105, 1126
BaeGI	GKGCMC	1 cut(s)	479
BaeI	ACNNNNGTAYC	2 cut(s)	1066, 1099
BanI	GGYRCC	4 cut(s)	206, 353, 476, 964
BanII	GRGCYC	2 cut(s)	52, 617
Bbv12I	GWGCWC	3 cut(s)	52, 617, 1340
BbvI	GCAGC	5 cut(s)	484, 584, 630, 1196, 1448
BccI	CCATC	6 cut(s)	265, 415, 742, 907, 1531, 1582
BceAI	ACGGC	8 cut(s)	66, 71, 216, 314, 431, 480, 654, 800
BcgI	CGANNNNNNTGC	2 cut(s)	539, 573
BciT130I	CCWGG	2 cut(s)	176, 1728
BciVI	GTATCC	4 cut(s)	800, 883, 1240, 1586
BcnI	CCSGG	6 cut(s)	34, 133, 371, 717, 739, 877
BcoDI	GTCTC	3 cut(s)	53, 100, 1534
BfaI	CTAG	2 cut(s)	27, 1644
BfmI	CTRYAG	5 cut(s)	598, 1182, 1425, 1630, 1707
BfoI	RGCGCY	2 cut(s)	644, 1288
BfuI	GTATCC	4 cut(s)	800, 883, 1240, 1586
BglI	GCCNNNNNGGC	1 cut(s)	74
Bme1390I	CCNGG	8 cut(s)	34, 133, 176, 371, 717, 739, 877, 1728
Bme18I	GGWCC	9 cut(s)	36, 124, 135, 254, 490, 838, 879, 1105, 1126
BmeT110I	CYCGRG	1 cut(s)	1487
BmrFI	CCNGG	8 cut(s)	34, 133, 176, 371, 717, 739, 877, 1728
BmsI	GCATC	6 cut(s)	739, 1047, 1401, 1500, 1509, 1642
BmtI	GCTAGC	1 cut(s)	1647
BpmI	CTGGAG	1 cut(s)	426
BpuMI	CCSGG	6 cut(s)	34, 133, 371, 717, 739, 877
Bsa29I	ATCGAT	1 cut(s)	954
BsaAI	YACGTR	1 cut(s)	1699
BsaHI	GRCGYC	4 cut(s)	552, 765, 813, 1040
BsaJI	CCNNGG	6 cut(s)	10, 32, 160, 825, 1313, 1514
BsaWI	WCCGGW	1 cut(s)	958
BsaXI	ACNNNNNCTCC	4 cut(s)	204, 234, 953, 983
Bsc4I	CCNNNNNNNGG	6 cut(s)	347, 453, 486, 853, 1465, 1494
Bse118I	RCCGGY	1 cut(s)	227
Bse1I	ACTGG	3 cut(s)	341, 409, 701
Bse3DI	GCAATG	2 cut(s)	279, 1459
BseAI	TCCGGA	1 cut(s)	958
BseBI	CCWGG	2 cut(s)	176, 1728
BseCI	ATCGAT	1 cut(s)	954
BseDI	CCNNGG	6 cut(s)	10, 32, 160, 825, 1313, 1514
BseGI	GGATG	5 cut(s)	730, 734, 1139, 1524, 1574
BseLI	CCNNNNNNNGG	6 cut(s)	347, 453, 486, 853, 1465, 1494
BseMI	GCAATG	2 cut(s)	279, 1459
BseMII	CTCAG	3 cut(s)	312, 808, 1691
BseNI	ACTGG	3 cut(s)	341, 409, 701
BseRI	GAGGAG	1 cut(s)	1147
BseSI	GKGCMC	1 cut(s)	479
BseX3I	CGGCCG	1 cut(s)	229
BseXI	GCAGC	5 cut(s)	484, 584, 630, 1196, 1448
BseYI	CCCAGC	2 cut(s)	1027, 1060
Bsh1236I	CGCG	4 cut(s)	129, 920, 1025, 1121
Bsh1285I	CGRYCG	2 cut(s)	232, 1097
BshFI	GGCC	6 cut(s)	68, 231, 521, 917, 1022, 1318
BshNI	GGYRCC	4 cut(s)	206, 353, 476, 964
BshVI	ATCGAT	1 cut(s)	954
BsiEI	CGRYCG	2 cut(s)	232, 1097
BsiHKAI	GWGCWC	3 cut(s)	52, 617, 1340
BsiHKCI	CYCGRG	1 cut(s)	1487
BsiWI	CGTACG	1 cut(s)	750
BslFI	GGGAC	2 cut(s)	476, 1091
BslI	CCNNNNNNNGG	6 cut(s)	347, 453, 486, 853, 1465, 1494
BsmAI	GTCTC	3 cut(s)	53, 100, 1534
BsmFI	GGGAC	2 cut(s)	476, 1091
BsnI	GGCC	6 cut(s)	68, 231, 521, 917, 1022, 1318
BsoBI	CYCGRG	1 cut(s)	1487
Bsp1286I	GDGCHC	4 cut(s)	52, 479, 617, 1340
Bsp13I	TCCGGA	1 cut(s)	958
Bsp143I	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
Bsp19I	CCATGG	4 cut(s)	10, 825, 1313, 1514
Bsp68I	TCGCGA	1 cut(s)	1121
BspANI	GGCC	6 cut(s)	68, 231, 521, 917, 1022, 1318
BspCNI	CTCAG	3 cut(s)	313, 807, 1690
BspDI	ATCGAT	1 cut(s)	954
BspEI	TCCGGA	1 cut(s)	958
BspFNI	CGCG	4 cut(s)	129, 920, 1025, 1121
BspMAI	CTGCAG	4 cut(s)	602, 1186, 1429, 1711
BspOI	GCTAGC	1 cut(s)	1647
BspPI	GGATC	2 cut(s)	950, 1718
BspQI	GCTCTTC	1 cut(s)	149
BspT107I	GGYRCC	4 cut(s)	206, 353, 476, 964
BsrDI	GCAATG	2 cut(s)	279, 1459
BsrFI	RCCGGY	1 cut(s)	227
BsrI	ACTGG	3 cut(s)	341, 409, 701
BssAI	RCCGGY	1 cut(s)	227
BssECI	CCNNGG	6 cut(s)	10, 32, 160, 825, 1313, 1514
BssMI	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
BssNI	GRCGYC	4 cut(s)	552, 765, 813, 1040
BssT1I	CCWWGG	5 cut(s)	10, 160, 825, 1313, 1514
Bst2UI	CCWGG	2 cut(s)	176, 1728
Bst4CI	ACNGT	5 cut(s)	517, 898, 908, 969, 1634
Bst6I	CTCTTC	2 cut(s)	149, 828
BstACI	GRCGYC	4 cut(s)	552, 765, 813, 1040
BstAPI	GCANNNNNTGC	2 cut(s)	353, 1433
BstBAI	YACGTR	1 cut(s)	1699
BstC8I	GCNNGC	6 cut(s)	79, 167, 349, 781, 1068, 1645
BstDEI	CTNAG	3 cut(s)	321, 794, 1677
BstDSI	CCRYGG	4 cut(s)	10, 825, 1313, 1514
BstF5I	GGATG	5 cut(s)	730, 734, 1139, 1524, 1574
BstFNI	CGCG	4 cut(s)	129, 920, 1025, 1121
BstH2I	RGCGCY	2 cut(s)	644, 1288
BstHHI	GCGC	6 cut(s)	131, 296, 643, 1027, 1287, 1657
BstKTI	GATC	6 cut(s)	954, 958, 1011, 1097, 1207, 1726
BstMAI	GTCTC	3 cut(s)	53, 100, 1534
BstMBI	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
BstMCI	CGRYCG	2 cut(s)	232, 1097
BstNI	CCWGG	2 cut(s)	176, 1728
BstNSI	RCATGY	2 cut(s)	340, 1081
BstSCI	CCNGG	8 cut(s)	32, 131, 174, 369, 715, 737, 875, 1726
BstSFI	CTRYAG	5 cut(s)	598, 1182, 1425, 1630, 1707
BstSLI	GKGCMC	1 cut(s)	479
BstUI	CGCG	4 cut(s)	129, 920, 1025, 1121
BstV1I	GCAGC	5 cut(s)	484, 584, 630, 1196, 1448
BstZI	CGGCCG	1 cut(s)	229
Bsu15I	ATCGAT	1 cut(s)	954
BsuI	GTATCC	4 cut(s)	800, 883, 1240, 1586
BsuRI	GGCC	6 cut(s)	68, 231, 521, 917, 1022, 1318
BsuTUI	ATCGAT	1 cut(s)	954
BtgI	CCRYGG	4 cut(s)	10, 825, 1313, 1514
BtgZI	GCGATG	1 cut(s)	1070
BtsCI	GGATG	5 cut(s)	730, 734, 1139, 1524, 1574
BtsIMutI	CAGTG	5 cut(s)	318, 708, 894, 1200, 1639
BtuMI	TCGCGA	1 cut(s)	1121
Cac8I	GCNNGC	6 cut(s)	79, 167, 349, 781, 1068, 1645
CfoI	GCGC	6 cut(s)	131, 296, 643, 1027, 1287, 1657
Cfr10I	RCCGGY	1 cut(s)	227
ClaI	ATCGAT	1 cut(s)	954
CpoI	CGGWCCG	2 cut(s)	124, 135
CseI	GACGC	4 cut(s)	736, 754, 821, 909
CsiI	ACCWGGT	1 cut(s)	174
Csp6I	GTAC	4 cut(s)	603, 751, 1075, 1448
CspI	CGGWCCG	2 cut(s)	124, 135
CviQI	GTAC	4 cut(s)	603, 751, 1075, 1448
DdeI	CTNAG	3 cut(s)	321, 794, 1677
DpnI	GATC	6 cut(s)	953, 957, 1010, 1096, 1206, 1725
DpnII	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
DrdI	GACNNNNNNGTC	1 cut(s)	341
DseDI	GACNNNNNNGTC	1 cut(s)	341
EaeI	YGGCCR	3 cut(s)	229, 519, 915
EagI	CGGCCG	1 cut(s)	229
Eam1104I	CTCTTC	2 cut(s)	149, 828
EarI	CTCTTC	2 cut(s)	149, 828
EciI	GGCGGA	2 cut(s)	295, 845
Ecl136II	GAGCTC	2 cut(s)	50, 615
EclXI	CGGCCG	1 cut(s)	229
Eco130I	CCWWGG	5 cut(s)	10, 160, 825, 1313, 1514
Eco24I	GRGCYC	2 cut(s)	52, 617
Eco47I	GGWCC	9 cut(s)	36, 124, 135, 254, 490, 838, 879, 1105, 1126
Eco52I	CGGCCG	1 cut(s)	229
Eco53kI	GAGCTC	2 cut(s)	50, 615
Eco88I	CYCGRG	1 cut(s)	1487
EcoICRI	GAGCTC	2 cut(s)	50, 615
EcoO109I	RGGNCCY	1 cut(s)	490
EcoRI	GAATTC	1 cut(s)	1032
EcoRII	CCWGG	2 cut(s)	174, 1726
EcoT14I	CCWWGG	5 cut(s)	10, 160, 825, 1313, 1514
EcoT38I	GRGCYC	2 cut(s)	52, 617
ErhI	CCWWGG	5 cut(s)	10, 160, 825, 1313, 1514
FaqI	GGGAC	2 cut(s)	476, 1091
FauI	CCCGC	3 cut(s)	244, 502, 1117
FblI	GTMKAC	1 cut(s)	333
FokI	GGATG	5 cut(s)	717, 721, 1126, 1531, 1561
FriOI	GRGCYC	2 cut(s)	52, 617
FspBI	CTAG	2 cut(s)	27, 1644
FspI	TGCGCA	1 cut(s)	1656
GlaI	GCGC	6 cut(s)	130, 295, 642, 1026, 1286, 1656
GsaI	CCCAGC	2 cut(s)	1031, 1064
GsuI	CTGGAG	1 cut(s)	426
HaeII	RGCGCY	2 cut(s)	644, 1288
HaeIII	GGCC	6 cut(s)	68, 231, 521, 917, 1022, 1318
HgaI	GACGC	4 cut(s)	736, 754, 821, 909
HhaI	GCGC	6 cut(s)	131, 296, 643, 1027, 1287, 1657
Hin1I	GRCGYC	4 cut(s)	552, 765, 813, 1040
Hin6I	GCGC	6 cut(s)	129, 294, 641, 1025, 1285, 1655
HinP1I	GCGC	6 cut(s)	129, 294, 641, 1025, 1285, 1655
HincII	GTYRAC	2 cut(s)	334, 636
HindII	GTYRAC	2 cut(s)	334, 636
HinfI	GANTC	5 cut(s)	61, 288, 525, 998, 1703
HphI	GGTGA	4 cut(s)	214, 395, 430, 1700
Hpy166II	GTNNAC	4 cut(s)	334, 513, 636, 1129
Hpy188III	TCNNGA	5 cut(s)	959, 1002, 1120, 1177, 1540
Hpy8I	GTNNAC	4 cut(s)	334, 513, 636, 1129
Hpy99I	CGWCG	6 cut(s)	335, 554, 557, 730, 815, 1045
HpyAV	CCTTC	3 cut(s)	308, 319, 1226
HpyCH4III	ACNGT	5 cut(s)	517, 898, 908, 969, 1634
HpyCH4IV	ACGT	4 cut(s)	552, 1040, 1290, 1698
HpyF3I	CTNAG	3 cut(s)	321, 794, 1677
HpySE526I	ACGT	4 cut(s)	552, 1040, 1290, 1698
Hsp92I	GRCGYC	4 cut(s)	552, 765, 813, 1040
HspAI	GCGC	6 cut(s)	129, 294, 641, 1025, 1285, 1655
KflI	GGGWCCC	1 cut(s)	490
Kpn2I	TCCGGA	1 cut(s)	958
Kzo9I	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
LguI	GCTCTTC	1 cut(s)	149
LmnI	GCTCC	2 cut(s)	146, 407
Lsp1109I	GCAGC	5 cut(s)	484, 584, 630, 1196, 1448
LweI	GCATC	6 cut(s)	739, 1047, 1401, 1500, 1509, 1642
MabI	ACCWGGT	1 cut(s)	174
MaeI	CTAG	2 cut(s)	27, 1644
MaeII	ACGT	4 cut(s)	552, 1040, 1290, 1698
MaeIII	GTNAC	4 cut(s)	220, 373, 892, 1420
MalI	GATC	6 cut(s)	953, 957, 1010, 1096, 1206, 1725
MboI	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
MboII	GAAGA	5 cut(s)	166, 845, 1354, 1407, 1693
MfeI	CAATTG	1 cut(s)	483
MhlI	GDGCHC	4 cut(s)	52, 479, 617, 1340
MluCI	AATT	8 cut(s)	386, 483, 579, 1032, 1188, 1380, 1431, 1692
MlyI	GAGTC	5 cut(s)	55, 282, 519, 1007, 1712
MmeI	TCCRAC	1 cut(s)	168
MroI	TCCGGA	1 cut(s)	958
MroXI	GAANNNNTTC	1 cut(s)	704
MseI	TTAA	4 cut(s)	771, 1152, 1470, 1734
MslI	CAYNNNNRTG	1 cut(s)	1333
MspA1I	CMGCKG	1 cut(s)	497
MspR9I	CCNGG	8 cut(s)	34, 133, 176, 371, 717, 739, 877, 1728
MunI	CAATTG	1 cut(s)	483
MvaI	CCWGG	2 cut(s)	176, 1728
MvnI	CGCG	4 cut(s)	129, 920, 1025, 1121
NciI	CCSGG	6 cut(s)	34, 133, 371, 717, 739, 877
NcoI	CCATGG	4 cut(s)	10, 825, 1313, 1514
NdeII	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
NheI	GCTAGC	1 cut(s)	1643
NmuCI	GTSAC	3 cut(s)	220, 373, 892
NruI	TCGCGA	1 cut(s)	1121
NsbI	TGCGCA	1 cut(s)	1656
NspI	RCATGY	2 cut(s)	340, 1081
PciI	ACATGT	1 cut(s)	1077
PciSI	GCTCTTC	1 cut(s)	149
PcsI	WCGNNNNNNNCGW	1 cut(s)	951
PdmI	GAANNNNTTC	1 cut(s)	704
Pfl23II	CGTACG	1 cut(s)	750
PflMI	CCANNNNNTGG	1 cut(s)	1465
Ple19I	CGATCG	1 cut(s)	1097
PleI	GAGTC	5 cut(s)	55, 282, 519, 1006, 1711
PpsI	GAGTC	5 cut(s)	55, 282, 519, 1006, 1711
Ppu21I	YACGTR	1 cut(s)	1699
PpuMI	RGGWCCY	1 cut(s)	490
PscI	ACATGT	1 cut(s)	1077
Psp124BI	GAGCTC	2 cut(s)	52, 617
Psp5II	RGGWCCY	1 cut(s)	490
Psp6I	CCWGG	2 cut(s)	174, 1726
PspFI	CCCAGC	2 cut(s)	1027, 1060
PspGI	CCWGG	2 cut(s)	174, 1726
PspLI	CGTACG	1 cut(s)	750
PspPPI	RGGWCCY	1 cut(s)	490
PstI	CTGCAG	4 cut(s)	602, 1186, 1429, 1711
PvuI	CGATCG	1 cut(s)	1097
RruI	TCGCGA	1 cut(s)	1121
RsaI	GTAC	4 cut(s)	604, 752, 1076, 1449
RsaNI	GTAC	4 cut(s)	603, 751, 1075, 1448
RseI	CAYNNNNRTG	1 cut(s)	1333
Rsr2I	CGGWCCG	2 cut(s)	124, 135
RsrII	CGGWCCG	2 cut(s)	124, 135
SacI	GAGCTC	2 cut(s)	52, 617
SalI	GTCGAC	1 cut(s)	332
SapI	GCTCTTC	1 cut(s)	149
SaqAI	TTAA	4 cut(s)	771, 1152, 1470, 1734
Sau3AI	GATC	6 cut(s)	951, 955, 1008, 1094, 1204, 1723
SchI	GAGTC	5 cut(s)	55, 282, 519, 1007, 1712
ScrFI	CCNGG	8 cut(s)	34, 133, 176, 371, 717, 739, 877, 1728
SduI	GDGCHC	4 cut(s)	52, 479, 617, 1340
SexAI	ACCWGGT	1 cut(s)	174
SfaNI	GCATC	6 cut(s)	739, 1047, 1401, 1500, 1509, 1642
SfcI	CTRYAG	5 cut(s)	598, 1182, 1425, 1630, 1707
SinI	GGWCC	9 cut(s)	36, 124, 135, 254, 490, 838, 879, 1105, 1126
SmiMI	CAYNNNNRTG	1 cut(s)	1333
Sse9I	AATT	8 cut(s)	386, 483, 579, 1032, 1188, 1380, 1431, 1692
SspI	AATATT	1 cut(s)	654
SspMI	CTAG	2 cut(s)	27, 1644
SstI	GAGCTC	2 cut(s)	52, 617
StyD4I	CCNGG	8 cut(s)	32, 131, 174, 369, 715, 737, 875, 1726
StyI	CCWWGG	5 cut(s)	10, 160, 825, 1313, 1514
TaaI	ACNGT	5 cut(s)	517, 898, 908, 969, 1634
TaiI	ACGT	4 cut(s)	555, 1043, 1293, 1701
TaqI	TCGA	8 cut(s)	171, 333, 437, 549, 821, 954, 1001, 1097
TaqII	GACCGA	1 cut(s)	1357
TasI	AATT	8 cut(s)	386, 483, 579, 1032, 1188, 1380, 1431, 1692
TatI	WGTACW	1 cut(s)	602
TauI	GCSGC	6 cut(s)	198, 395, 446, 920, 980, 1025
Tru1I	TTAA	4 cut(s)	771, 1152, 1470, 1734
Tru9I	TTAA	4 cut(s)	771, 1152, 1470, 1734
TscAI	CASTG	5 cut(s)	325, 715, 901, 1207, 1639
TseFI	GTSAC	3 cut(s)	220, 373, 892
TseI	GCWGC	5 cut(s)	497, 597, 643, 1184, 1436
Tsp45I	GTSAC	3 cut(s)	220, 373, 892
TspDTI	ATGAA	3 cut(s)	558, 646, 1628
TspGWI	ACGGA	2 cut(s)	738, 871
TspRI	CASTG	5 cut(s)	325, 715, 901, 1207, 1639
Van91I	CCANNNNNTGG	1 cut(s)	1465
VpaK11BI	GGWCC	9 cut(s)	36, 124, 135, 254, 490, 838, 879, 1105, 1126
XapI	RAATTY	3 cut(s)	386, 1032, 1692
XceI	RCATGY	2 cut(s)	340, 1081
XcmI	CCANNNNNNNNNTGG	1 cut(s)	418
XmiI	GTMKAC	1 cut(s)	333
XmnI	GAANNNNTTC	1 cut(s)	704
XspI	CTAG	2 cut(s)	27, 1644
ZraI	GACGTC	2 cut(s)	553, 1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.