Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Reverse (-)

20171035 .. 20176589

Gene Structure 5555 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g22020.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGCCAGAATTTGAACCAATACATAAAAAATTGTATCCACAAGGGATGTGTTGGCATAAATTCTTATTCCCATTTCACATCTCCCCTATGACCCATACTGATTCCAGTAAGTACCTAACCTTTTGGCCTTCCTCCTCTGCCTTGTCTTTTATCCAAAATCACCGTCCGCAGTCAGAAGCTTTTACATTTATTTATATAAAGGAAACTCGATCCTCACTCAAAATCCAAAGGAAAGATAACCCACATCAAATCTCAATGGAGATTAGTGCCCCAGTCCCCCATGGCCCCTCCTCCTCTTTCTCAAGTCCCCGGGCCTACCTCCGAGCCCTGGCTGACACACCCACCCGCCTCGCTCGCCGGGCCAGTTCCGTCTCCACCTCCTACGACGAAATGAGCGCCGTTCGAGCTCGCTCCGGCCCCCACATGCAGAAGACGCTCCGCTGGTTCGACCTCATCGGATTGGGCCTCGGCGGGATGGTCGGTGCTGGCGTCTTTGTCACCACCGGTCGTGCCAGTCGCCTCTACGCCGGCCCAGCTATCGTCATCTCCTACGCCATTGCCGGATTCTGCGCTCTTCTCTCCGCCTTCTGCTACACTGAGTTCGCCGTCGACATGCCCGTTGCTGGCGGCGCCTTTAGCTACCTCCGCGTCACCTTCGGTGAATTCGTGGCGTTTTTAACCGGAGCGAACCTGGTGATGGACTACGTAATGTCGAACGCCGCCGTCGCGAGGGGCTTCACCGCCTACTTGGGCTCTGCAATCGGCGTCCCCGCCGCCAAATGGAGGTTCACTGTCTCCGGACTCCCCGACGGATTCAATCAGACCGACGTCGTCGCCGTCGTCGTCGTTTTAACCATTACGCTTATCATCTGCTACAGTACGAAGGAGAGCTCTGTTTTGAACATGGTGCTGACGGCGGTGCATATAATCTTCATCATGTTTGTTATAGTCGCTGGATTCTGCAAAGGGGACTGGAACAACTTCACGCACCCGGCCGACCCGGCTCGGCCATCCGGGTTTTTTCCTTACGGGGTTTCGGGTGTGTTTAATGGGGCAAGTATGGTTTACCTCAGCTACATCGGGTACGACGCCGTATCGACGATGGCGGAAGAGGTGAAGAATCCGGTTAAGGACATCCCAATCGGCGTGTCGGGCTCAGTCTTGCTCGTCACCGTCCTCTACTGCTTAATGGCGGCGTCCATGTCGAAGCTCCTCCCGTACGACGCGATCGACCCGGAGGCTCCGTTTTCAGCAGCGTTCAGAGGGAAGTGGGAGTCGAACGTGATCGGAGTGGGGGCCAGTTTTGGAATTCTAACGTCACTGCTTGTGGCCATGCTGGGCCAGGCGCGTTACATGTGTGTCATCGGACGGTCCAGGGTTGTCCCTGGTTGGTTCGCTAGGGTCCACCCTAAGACATCCACGCCTGTCAACGCCTCCGCTTTTCTCGGTATCTTGACAGCCGCAATTGCGCTTTTCACGGATCTGAATGTCCTTCTCAACCTTGTATCCATTGGCACGCTATTTGTTTTCTACATGGTGGCCAACGCTGTGATTTTTAGGCGCTATGTCGTGGTGGGGACGACCAATCCACGACCTACATTATCATTCCTGTGCTCATTTTCCCTCACCTCTATCATCTTCGTCTTCATTTGGCATTTCGCACCACGAGGGAAGCTGAAAGCCTTCATGCTTGTTGTCACCGCAGCAATTGCGGTTTCAATGCTGCAAATTTTCCATTTCCAGGTTCCACAAGTGAGAAAGCCGGAATATTGGGGCGTCCCCTTGATGCCATGGATGCCATCCATCTCCATCTTCTTGAACATATTTTTGTTGGGGTCTATGGACAAGCCATCCTATGTGAGGTTCGGAGTCTTTTCGGGAGTTACCGTGCTCGTGTACGTGTTCTATAGCGTTCATGCTAGCTTTGATGCAGAAGGAAGTGGATCTCTCAATCAAAAGAACGGTGAATTTCACAGAGAATCAGCTCAAGAAAGTAATGATCCAAGTCTTGGAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

673

Amino Acids

73.45

Weight (kDa)

9.24

Isoelectric Point (pI)

40.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	831
AccB1I	GGYRCC	1 cut(s)	629
AccB7I	CCANNNNNTGG	1 cut(s)	2009
AccI	GTMKAC	1 cut(s)	609
AccII	CGCG	4 cut(s)	648, 728, 1226, 1348
AccIII	TCCGGA	1 cut(s)	797
AclWI	GGATC	4 cut(s)	204, 1488, 1951, 1994
AcoI	YGGCCR	4 cut(s)	993, 1007, 1329, 1539
AcsI	RAATTY	6 cut(s)	8, 59, 662, 1308, 1728, 1967
AcyI	GRCGYC	7 cut(s)	489, 630, 765, 828, 1089, 1196, 1776
AfaI	GTAC	5 cut(s)	113, 880, 1085, 1220, 1898
AfiI	CCNNNNNNNGG	9 cut(s)	328, 623, 697, 729, 780, 783, 1741, 1860, 2009
AflIII	ACRYGT	2 cut(s)	1353, 1899
AgeI	ACCGGT	1 cut(s)	503
AgsI	TTSAA	5 cut(s)	14, 817, 901, 1719, 1819
AjnI	CCWGG	6 cut(s)	327, 690, 1341, 1373, 1384, 1740
AjuI	GAANNNNNNNTTGG	2 cut(s)	770, 802
Alw21I	GWGCWC	4 cut(s)	409, 893, 1616, 1893
Alw26I	GTCTC	2 cut(s)	376, 799
AlwI	GGATC	4 cut(s)	204, 1488, 1951, 1994
Ama87I	CYCGRG	1 cut(s)	309
Aor13HI	TCCGGA	1 cut(s)	797
ApeKI	GCWGC	3 cut(s)	1253, 1703, 1723
ApoI	RAATTY	6 cut(s)	8, 59, 662, 1308, 1728, 1967
ArsI	GACNNNNNNTTYG	2 cut(s)	148, 180
AsiGI	ACCGGT	1 cut(s)	503
Asp700I	GAANNNNTTC	2 cut(s)	980, 1682
AspLEI	GCGC	6 cut(s)	398, 572, 632, 1348, 1471, 1563
AsuC2I	CCSGG	7 cut(s)	310, 311, 359, 992, 1001, 1015, 1235
AsuNHI	GCTAGC	1 cut(s)	1919
AvaI	CYCGRG	1 cut(s)	309
AvaII	GGWCC	2 cut(s)	1371, 1402
BaeGI	GKGCMC	1 cut(s)	271
BalI	TGGCCA	2 cut(s)	1331, 1541
BanI	GGYRCC	1 cut(s)	629
BanII	GRGCYC	5 cut(s)	328, 409, 755, 893, 1157
BauI	CACGAG	2 cut(s)	1665, 1892
BbsI	GAAGAC	2 cut(s)	437, 1636
Bbv12I	GWGCWC	4 cut(s)	409, 893, 1616, 1893
BbvCI	CCTCAGC	1 cut(s)	1070
BbvI	GCAGC	3 cut(s)	1265, 1710, 1715
BccI	CCATC	8 cut(s)	469, 691, 1018, 1096, 1807, 1811, 1817, 1858
BceAI	ACGGC	6 cut(s)	383, 590, 707, 821, 930, 1076
BciT130I	CCWGG	6 cut(s)	329, 692, 1343, 1375, 1386, 1742
BciVI	GTATCC	2 cut(s)	45, 1516
BcnI	CCSGG	7 cut(s)	310, 311, 359, 992, 1001, 1015, 1235
BcoDI	GTCTC	2 cut(s)	376, 799
BfaI	CTAG	2 cut(s)	1398, 1920
BfmI	CTRYAG	2 cut(s)	874, 1906
BfoI	RGCGCY	3 cut(s)	399, 633, 1564
BfuI	GTATCC	2 cut(s)	45, 1516
BglI	GCCNNNNNGGC	1 cut(s)	1001
BisI	GCNGC	8 cut(s)	628, 720, 774, 1194, 1254, 1461, 1704, 1724
BlsI	GCNGC	8 cut(s)	629, 721, 775, 1195, 1255, 1462, 1705, 1725
Bme18I	GGWCC	2 cut(s)	1371, 1402
BmeT110I	CYCGRG	1 cut(s)	309
BmiI	GGNNCC	7 cut(s)	286, 418, 631, 1242, 1297, 1403, 1746
BmrI	ACTGGG	1 cut(s)	266
BmsI	GCATC	3 cut(s)	1776, 1785, 1918
BmtI	GCTAGC	1 cut(s)	1923
BmuI	ACTGGG	1 cut(s)	266
BoxI	GACNNNNGTC	1 cut(s)	827
BpiI	GAAGAC	2 cut(s)	437, 1636
Bpu10I	CCTNAGC	1 cut(s)	1070
BpuEI	CTTGAG	2 cut(s)	286, 1971
BpuMI	CCSGG	7 cut(s)	310, 311, 359, 992, 1001, 1015, 1235
BsaAI	YACGTR	2 cut(s)	706, 1900
BsaHI	GRCGYC	7 cut(s)	489, 630, 765, 828, 1089, 1196, 1776
BsaJI	CCNNGG	8 cut(s)	280, 308, 309, 327, 466, 1374, 1384, 1790
BsaWI	WCCGGW	4 cut(s)	503, 680, 797, 1123
BsaXI	ACNNNNNCTCC	4 cut(s)	1229, 1259, 1872, 1902
Bsc4I	CCNNNNNNNGG	9 cut(s)	328, 623, 697, 729, 780, 783, 1741, 1860, 2009
Bse118I	RCCGGY	2 cut(s)	503, 527
Bse1I	ACTGG	6 cut(s)	105, 272, 363, 513, 977, 1299
Bse3DI	GCAATG	1 cut(s)	555
BseAI	TCCGGA	1 cut(s)	797
BseBI	CCWGG	6 cut(s)	329, 692, 1343, 1375, 1386, 1742
BseDI	CCNNGG	8 cut(s)	280, 308, 309, 327, 466, 1374, 1384, 1790
BseGI	GGATG	8 cut(s)	51, 480, 1010, 1134, 1415, 1799, 1800, 1850
BseLI	CCNNNNNNNGG	9 cut(s)	328, 623, 697, 729, 780, 783, 1741, 1860, 2009
BseMI	GCAATG	1 cut(s)	555
BseMII	CTCAG	3 cut(s)	588, 1084, 1170
BseNI	ACTGG	6 cut(s)	105, 272, 363, 513, 977, 1299
BseRI	GAGGAG	4 cut(s)	124, 280, 283, 1202
BseSI	GKGCMC	1 cut(s)	271
BseX3I	CGGCCG	1 cut(s)	993
BseXI	GCAGC	3 cut(s)	1265, 1710, 1715
BseYI	CCCAGC	2 cut(s)	532, 1336
Bsh1236I	CGCG	4 cut(s)	648, 728, 1226, 1348
Bsh1285I	CGRYCG	3 cut(s)	508, 996, 1230
BshNI	GGYRCC	1 cut(s)	629
BshTI	ACCGGT	1 cut(s)	503
BsiEI	CGRYCG	3 cut(s)	508, 996, 1230
BsiHKAI	GWGCWC	4 cut(s)	409, 893, 1616, 1893
BsiHKCI	CYCGRG	1 cut(s)	309
BsiWI	CGTACG	1 cut(s)	1218
BslFI	GGGAC	7 cut(s)	260, 291, 752, 983, 1367, 1591, 1763
BslI	CCNNNNNNNGG	9 cut(s)	328, 623, 697, 729, 780, 783, 1741, 1860, 2009
BsmAI	GTCTC	2 cut(s)	376, 799
BsmBI	CGTCTC	1 cut(s)	376
BsmFI	GGGAC	7 cut(s)	260, 291, 752, 983, 1367, 1591, 1763
BsoBI	CYCGRG	1 cut(s)	309
Bsp1286I	GDGCHC	8 cut(s)	271, 328, 409, 755, 893, 1157, 1616, 1893
Bsp13I	TCCGGA	1 cut(s)	797
Bsp143I	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
Bsp19I	CCATGG	2 cut(s)	280, 1790
Bsp68I	TCGCGA	1 cut(s)	728
BspCNI	CTCAG	3 cut(s)	589, 1083, 1169
BspEI	TCCGGA	1 cut(s)	797
BspFNI	CGCG	4 cut(s)	648, 728, 1226, 1348
BspLI	GGNNCC	7 cut(s)	286, 418, 631, 1242, 1297, 1403, 1746
BspOI	GCTAGC	1 cut(s)	1923
BspPI	GGATC	4 cut(s)	204, 1488, 1951, 1994
BspQI	GCTCTTC	1 cut(s)	579
BspT107I	GGYRCC	1 cut(s)	629
BsrDI	GCAATG	1 cut(s)	555
BsrFI	RCCGGY	2 cut(s)	503, 527
BsrI	ACTGG	6 cut(s)	105, 272, 363, 513, 977, 1299
BssAI	RCCGGY	2 cut(s)	503, 527
BssECI	CCNNGG	8 cut(s)	280, 308, 309, 327, 466, 1374, 1384, 1790
BssMI	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
BssNI	GRCGYC	7 cut(s)	489, 630, 765, 828, 1089, 1196, 1776
BssSI	CACGAG	2 cut(s)	1665, 1892
BssT1I	CCWWGG	2 cut(s)	280, 1790
Bst2BI	CACGAG	2 cut(s)	1665, 1892
Bst2UI	CCWGG	6 cut(s)	329, 692, 1343, 1375, 1386, 1742
Bst4CI	ACNGT	7 cut(s)	164, 793, 878, 1174, 1371, 1888, 1964
Bst6I	CTCTTC	2 cut(s)	579, 1104
BstACI	GRCGYC	7 cut(s)	489, 630, 765, 828, 1089, 1196, 1776
BstAPI	GCANNNNNTGC	1 cut(s)	1709
BstBAI	YACGTR	2 cut(s)	706, 1900
BstC8I	GCNNGC	7 cut(s)	355, 409, 487, 529, 625, 1517, 1921
BstDEI	CTNAG	4 cut(s)	597, 1070, 1156, 1410
BstDSI	CCRYGG	2 cut(s)	280, 1790
BstENI	CCTNNNNNAGG	1 cut(s)	1858
BstF5I	GGATG	8 cut(s)	51, 480, 1010, 1134, 1415, 1799, 1800, 1850
BstFNI	CGCG	4 cut(s)	648, 728, 1226, 1348
BstH2I	RGCGCY	3 cut(s)	399, 633, 1564
BstHHI	GCGC	6 cut(s)	398, 572, 632, 1348, 1471, 1563
BstKTI	GATC	6 cut(s)	212, 1230, 1287, 1483, 1946, 2002
BstMAI	GTCTC	2 cut(s)	376, 799
BstMBI	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
BstMCI	CGRYCG	3 cut(s)	508, 996, 1230
BstNI	CCWGG	6 cut(s)	329, 692, 1343, 1375, 1386, 1742
BstNSI	RCATGY	3 cut(s)	427, 616, 1357
BstPAI	GACNNNNGTC	1 cut(s)	827
BstSFI	CTRYAG	2 cut(s)	874, 1906
BstSLI	GKGCMC	1 cut(s)	271
BstSNI	TACGTA	1 cut(s)	706
BstUI	CGCG	4 cut(s)	648, 728, 1226, 1348
BstV1I	GCAGC	3 cut(s)	1265, 1710, 1715
BstV2I	GAAGAC	2 cut(s)	437, 1636
BstX2I	RGATCY	2 cut(s)	1480, 1943
BstYI	RGATCY	2 cut(s)	1480, 1943
BstZI	CGGCCG	1 cut(s)	993
BsuI	GTATCC	2 cut(s)	45, 1516
BtgI	CCRYGG	2 cut(s)	280, 1790
BtsCI	GGATG	8 cut(s)	51, 480, 1010, 1134, 1415, 1799, 1800, 1850
BtsI	GCAGTG	1 cut(s)	1319
BtsIMutI	CAGTG	3 cut(s)	594, 789, 1319
BtuMI	TCGCGA	1 cut(s)	728
Cac8I	GCNNGC	7 cut(s)	355, 409, 487, 529, 625, 1517, 1921
CfoI	GCGC	6 cut(s)	398, 572, 632, 1348, 1471, 1563
Cfr10I	RCCGGY	2 cut(s)	503, 527
Cfr9I	CCCGGG	1 cut(s)	309
CseI	GACGC	8 cut(s)	442, 478, 637, 754, 1097, 1185, 1232, 1765
CsiI	ACCWGGT	1 cut(s)	690
Csp6I	GTAC	5 cut(s)	112, 879, 1084, 1219, 1897
CspAI	ACCGGT	1 cut(s)	503
CviQI	GTAC	5 cut(s)	112, 879, 1084, 1219, 1897
DdeI	CTNAG	4 cut(s)	597, 1070, 1156, 1410
DinI	GGCGCC	1 cut(s)	631
DpnI	GATC	6 cut(s)	211, 1229, 1286, 1482, 1945, 2001
DpnII	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
EaeI	YGGCCR	4 cut(s)	993, 1007, 1329, 1539
EagI	CGGCCG	1 cut(s)	993
Eam1104I	CTCTTC	2 cut(s)	579, 1104
EarI	CTCTTC	2 cut(s)	579, 1104
EciI	GGCGGA	2 cut(s)	571, 1121
Ecl136II	GAGCTC	2 cut(s)	407, 891
EclXI	CGGCCG	1 cut(s)	993
Eco105I	TACGTA	1 cut(s)	706
Eco130I	CCWWGG	2 cut(s)	280, 1790
Eco24I	GRGCYC	5 cut(s)	328, 409, 755, 893, 1157
Eco47I	GGWCC	2 cut(s)	1371, 1402
Eco52I	CGGCCG	1 cut(s)	993
Eco53kI	GAGCTC	2 cut(s)	407, 891
Eco88I	CYCGRG	1 cut(s)	309
EcoICRI	GAGCTC	2 cut(s)	407, 891
EcoNI	CCTNNNNNAGG	1 cut(s)	1858
EcoRI	GAATTC	2 cut(s)	662, 1308
EcoRII	CCWGG	6 cut(s)	327, 690, 1341, 1373, 1384, 1740
EcoT14I	CCWWGG	2 cut(s)	280, 1790
EcoT38I	GRGCYC	5 cut(s)	328, 409, 755, 893, 1157
EgeI	GGCGCC	1 cut(s)	631
EheI	GGCGCC	1 cut(s)	631
ErhI	CCWWGG	2 cut(s)	280, 1790
Esp3I	CGTCTC	1 cut(s)	376
FaqI	GGGAC	7 cut(s)	260, 291, 752, 983, 1367, 1591, 1763
FauI	CCCGC	3 cut(s)	353, 464, 778
FblI	GTMKAC	1 cut(s)	609
Fnu4HI	GCNGC	8 cut(s)	628, 720, 774, 1194, 1254, 1461, 1704, 1724
FokI	GGATG	8 cut(s)	58, 487, 997, 1121, 1402, 1786, 1807, 1837
FriOI	GRGCYC	5 cut(s)	328, 409, 755, 893, 1157
Fsp4HI	GCNGC	8 cut(s)	628, 720, 774, 1194, 1254, 1461, 1704, 1724
FspBI	CTAG	2 cut(s)	1398, 1920
GlaI	GCGC	6 cut(s)	397, 571, 631, 1347, 1470, 1562
GluI	GCNGC	8 cut(s)	628, 720, 774, 1194, 1254, 1461, 1704, 1724
GsaI	CCCAGC	2 cut(s)	536, 1340
HaeII	RGCGCY	3 cut(s)	399, 633, 1564
HgaI	GACGC	8 cut(s)	442, 478, 637, 754, 1097, 1185, 1232, 1765
HhaI	GCGC	6 cut(s)	398, 572, 632, 1348, 1471, 1563
Hin1I	GRCGYC	7 cut(s)	489, 630, 765, 828, 1089, 1196, 1776
Hin6I	GCGC	6 cut(s)	396, 570, 630, 1346, 1469, 1561
HinP1I	GCGC	6 cut(s)	396, 570, 630, 1346, 1469, 1561
HincII	GTYRAC	2 cut(s)	610, 1429
HindII	GTYRAC	2 cut(s)	610, 1429
HindIII	AAGCTT	1 cut(s)	177
HinfI	GANTC	9 cut(s)	101, 564, 801, 813, 957, 1120, 1274, 1869, 1979
Hpy166II	GTNNAC	6 cut(s)	610, 789, 1066, 1405, 1429, 1897
Hpy188I	TCNGA	9 cut(s)	175, 323, 458, 822, 1262, 1289, 1367, 1485, 1868
Hpy188III	TCNNGA	6 cut(s)	727, 798, 1453, 1816, 1878, 1988
Hpy8I	GTNNAC	6 cut(s)	610, 789, 1066, 1405, 1429, 1897
HpyAV	CCTTC	7 cut(s)	138, 595, 664, 877, 1502, 1693, 1928
HpyCH4III	ACNGT	7 cut(s)	164, 793, 878, 1174, 1371, 1888, 1964
HpyCH4IV	ACGT	5 cut(s)	705, 828, 1281, 1316, 1899
HpyCH4V	TGCA	6 cut(s)	427, 758, 922, 963, 1726, 1931
HpyF3I	CTNAG	4 cut(s)	597, 1070, 1156, 1410
HpySE526I	ACGT	5 cut(s)	705, 828, 1281, 1316, 1899
Hsp92I	GRCGYC	7 cut(s)	489, 630, 765, 828, 1089, 1196, 1776
HspAI	GCGC	6 cut(s)	396, 570, 630, 1346, 1469, 1561
KasI	GGCGCC	1 cut(s)	629
Kpn2I	TCCGGA	1 cut(s)	797
KroI	GCCGGC	1 cut(s)	527
KroNI	GCCGGC	1 cut(s)	529
Kzo9I	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
LguI	GCTCTTC	1 cut(s)	579
LmnI	GCTCC	5 cut(s)	416, 441, 683, 1215, 1246
Lsp1109I	GCAGC	3 cut(s)	1265, 1710, 1715
LweI	GCATC	3 cut(s)	1776, 1785, 1918
MabI	ACCWGGT	1 cut(s)	690
MaeI	CTAG	2 cut(s)	1398, 1920
MaeII	ACGT	5 cut(s)	705, 828, 1281, 1316, 1899
MaeIII	GTNAC	7 cut(s)	496, 649, 1168, 1317, 1349, 1696, 1882
MalI	GATC	6 cut(s)	211, 1229, 1286, 1482, 1945, 2001
MboI	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
MboII	GAAGA	8 cut(s)	442, 566, 922, 1121, 1129, 1630, 1636, 1804
MfeI	CAATTG	2 cut(s)	1464, 1707
MflI	RGATCY	2 cut(s)	1480, 1943
MhlI	GDGCHC	8 cut(s)	271, 328, 409, 755, 893, 1157, 1616, 1893
MlsI	TGGCCA	2 cut(s)	1331, 1541
MluCI	AATT	9 cut(s)	8, 29, 59, 662, 1308, 1464, 1707, 1728, 1967
MluNI	TGGCCA	2 cut(s)	1331, 1541
Mly113I	GGCGCC	1 cut(s)	630
MlyI	GAGTC	3 cut(s)	795, 1283, 1878
Mox20I	TGGCCA	2 cut(s)	1331, 1541
MroI	TCCGGA	1 cut(s)	797
MroNI	GCCGGC	1 cut(s)	527
MroXI	GAANNNNTTC	2 cut(s)	980, 1682
MscI	TGGCCA	2 cut(s)	1331, 1541
MseI	TTAA	5 cut(s)	677, 851, 1047, 1128, 1187
MslI	CAYNNNNRTG	1 cut(s)	1609
Msp20I	TGGCCA	2 cut(s)	1331, 1541
MspA1I	CMGCKG	1 cut(s)	441
MunI	CAATTG	2 cut(s)	1464, 1707
MvaI	CCWGG	6 cut(s)	329, 692, 1343, 1375, 1386, 1742
MvnI	CGCG	4 cut(s)	648, 728, 1226, 1348
NaeI	GCCGGC	1 cut(s)	529
NarI	GGCGCC	1 cut(s)	630
NciI	CCSGG	7 cut(s)	310, 311, 359, 992, 1001, 1015, 1235
NcoI	CCATGG	2 cut(s)	280, 1790
NdeII	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
NgoMIV	GCCGGC	1 cut(s)	527
NheI	GCTAGC	1 cut(s)	1919
NlaIV	GGNNCC	7 cut(s)	286, 418, 631, 1242, 1297, 1403, 1746
NmeAIII	GCCGAG	2 cut(s)	447, 985
NmuCI	GTSAC	5 cut(s)	496, 649, 1168, 1317, 1696
NruI	TCGCGA	1 cut(s)	728
NspI	RCATGY	3 cut(s)	427, 616, 1357
PciI	ACATGT	1 cut(s)	1353
PciSI	GCTCTTC	1 cut(s)	579
PcsI	WCGNNNNNNNCGW	7 cut(s)	486, 615, 663, 834, 837, 840, 1227
PdiI	GCCGGC	1 cut(s)	529
PdmI	GAANNNNTTC	2 cut(s)	980, 1682
PfeI	GAWTC	6 cut(s)	101, 564, 813, 957, 1120, 1979
Pfl23II	CGTACG	1 cut(s)	1218
PflFI	GACNNNGTC	1 cut(s)	830
PflMI	CCANNNNNTGG	1 cut(s)	2009
PinAI	ACCGGT	1 cut(s)	503
PkrI	GCNGC	8 cut(s)	629, 721, 775, 1195, 1255, 1462, 1705, 1725
Ple19I	CGATCG	1 cut(s)	1230
PleI	GAGTC	3 cut(s)	795, 1282, 1877
PluTI	GGCGCC	1 cut(s)	633
PpsI	GAGTC	3 cut(s)	795, 1282, 1877
Ppu21I	YACGTR	2 cut(s)	706, 1900
PscI	ACATGT	1 cut(s)	1353
PshAI	GACNNNNGTC	1 cut(s)	827
Psp124BI	GAGCTC	2 cut(s)	409, 893
Psp6I	CCWGG	6 cut(s)	327, 690, 1341, 1373, 1384, 1740
PspFI	CCCAGC	2 cut(s)	532, 1336
PspGI	CCWGG	6 cut(s)	327, 690, 1341, 1373, 1384, 1740
PspLI	CGTACG	1 cut(s)	1218
PspN4I	GGNNCC	7 cut(s)	286, 418, 631, 1242, 1297, 1403, 1746
PsuI	RGATCY	2 cut(s)	1480, 1943
PsyI	GACNNNGTC	1 cut(s)	830
PvuI	CGATCG	1 cut(s)	1230
RruI	TCGCGA	1 cut(s)	728
RsaI	GTAC	5 cut(s)	113, 880, 1085, 1220, 1898
RsaNI	GTAC	5 cut(s)	112, 879, 1084, 1219, 1897
RseI	CAYNNNNRTG	1 cut(s)	1609
SacI	GAGCTC	2 cut(s)	409, 893
SalI	GTCGAC	1 cut(s)	608
SapI	GCTCTTC	1 cut(s)	579
SaqAI	TTAA	5 cut(s)	677, 851, 1047, 1128, 1187
SatI	GCNGC	8 cut(s)	628, 720, 774, 1194, 1254, 1461, 1704, 1724
Sau3AI	GATC	6 cut(s)	209, 1227, 1284, 1480, 1943, 1999
SchI	GAGTC	3 cut(s)	795, 1283, 1878
SduI	GDGCHC	8 cut(s)	271, 328, 409, 755, 893, 1157, 1616, 1893
SexAI	ACCWGGT	1 cut(s)	690
SfaNI	GCATC	3 cut(s)	1776, 1785, 1918
SfcI	CTRYAG	2 cut(s)	874, 1906
SfoI	GGCGCC	1 cut(s)	631
SinI	GGWCC	2 cut(s)	1371, 1402
SmaI	CCCGGG	1 cut(s)	311
SmiMI	CAYNNNNRTG	1 cut(s)	1609
SmlI	CTYRAG	2 cut(s)	301, 1986
SmoI	CTYRAG	2 cut(s)	301, 1986
SnaBI	TACGTA	1 cut(s)	706
Sse9I	AATT	9 cut(s)	8, 29, 59, 662, 1308, 1464, 1707, 1728, 1967
SspDI	GGCGCC	1 cut(s)	629
SspI	AATATT	1 cut(s)	1769
SspMI	CTAG	2 cut(s)	1398, 1920
SstI	GAGCTC	2 cut(s)	409, 893
StyI	CCWWGG	2 cut(s)	280, 1790
TaaI	ACNGT	7 cut(s)	164, 793, 878, 1174, 1371, 1888, 1964
TaiI	ACGT	5 cut(s)	708, 831, 1284, 1319, 1902
TaqI	TCGA	9 cut(s)	208, 403, 447, 609, 713, 1097, 1205, 1230, 1277
TaqII	GACCGA	1 cut(s)	839
TasI	AATT	9 cut(s)	8, 29, 59, 662, 1308, 1464, 1707, 1728, 1967
TauI	GCSGC	5 cut(s)	630, 722, 776, 1196, 1463
TfiI	GAWTC	6 cut(s)	101, 564, 813, 957, 1120, 1979
Tru1I	TTAA	5 cut(s)	677, 851, 1047, 1128, 1187
Tru9I	TTAA	5 cut(s)	677, 851, 1047, 1128, 1187
TscAI	CASTG	3 cut(s)	601, 796, 1326
TseFI	GTSAC	5 cut(s)	496, 649, 1168, 1317, 1696
TseI	GCWGC	3 cut(s)	1253, 1703, 1723
Tsp45I	GTSAC	5 cut(s)	496, 649, 1168, 1317, 1696
TspDTI	ATGAA	4 cut(s)	922, 1636, 1675, 1904
TspGWI	ACGGA	4 cut(s)	358, 825, 1233, 1493
TspMI	CCCGGG	1 cut(s)	309
TspRI	CASTG	3 cut(s)	601, 796, 1326
Tth111I	GACNNNGTC	1 cut(s)	830
Van91I	CCANNNNNTGG	1 cut(s)	2009
VpaK11BI	GGWCC	2 cut(s)	1371, 1402
XagI	CCTNNNNNAGG	1 cut(s)	1858
XapI	RAATTY	6 cut(s)	8, 59, 662, 1308, 1728, 1967
XceI	RCATGY	3 cut(s)	427, 616, 1357
XmaI	CCCGGG	1 cut(s)	309
XmiI	GTMKAC	1 cut(s)	609
XmnI	GAANNNNTTC	2 cut(s)	980, 1682
XspI	CTAG	2 cut(s)	1398, 1920
ZraI	GACGTC	1 cut(s)	829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.