Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Forward (+)

23448395 .. 23451307

Gene Structure 2913 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18402

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGAAGCCAAAACACTCCAGTATAGTTTTGCAAACATGGCTTCCACCACCACCACAACTCAAACTCCTCCCAACAACACAAACACCAGTCTTTGCTTCTCCAACTATCTCCAATCCCTGTCCCAAACACCCCACAGGCTCAGAAAGAGAATGCTTGCCACCTGGACCCCAGACCAGGAGCTCAACCAAGTGAGGCAAAGGTCAGGGGCTGATATGAAGAGAAAACTCAAGTGGTATGATCTCATGGCTCTTGGTGTTGGAGGCATGCTTGGCGTTGGAGTCTTTGTCACAACAGGTTCTGTAGCCCACAAAACAGCTGGTCCTTCTGTCTTCATATCCTATATCATTGCAGGAATATCAGCCCTTCTTTCTTCCTTGTGTTACACTGAATTTTCTGTTCAAATTCCAGTTGCTGGTGGTGCTTTTAGTTATCTCAGAGTGACTTTTGGAGAATTTGTAGGTTATTTTGCTGGGGCAAATATACTCATGGAGTATGTATTGTCAAATGCTGCTGTGGCAAGGAGTTTTACAGAGTATTTATCCTCTGCATTTGGAGAAGATGATCCGAGGACATGGAGAGTAGAAGTGGATGGGTTAGTAAAGGGCTATAATATGTTGGACTTCCCAGCTGTTGCTCTTATTCTACTTCTCACTTTCTGCCTTTGCCATAGCACAAAGGAAAGCTCCACACTGAACCTTGTTATGACGGTGTTTCATGTGGTGTTCTTTGGATTTATTATAATTGCTGGTTTCTGCATTGGGAGCACCAACAACTTGGTGAAGCCTAAGGGACTAGCGCCTTTTGGTGTTAGAGGAGTTCTTGATGGGGCAGCTATAGTTTATTTCAGTTACATCGGCTACGATTCAGCTTCAACCATGGCCGAAGAGATCCAAAACCCTTCGCAGAGCCTGCCCGTCGGCATCATTGGTTCCGTTGTCATTACCTCCATGCTTTATTGCCTTATGGCCTTGTCCTTGTGTTTGATGGTTCCTTACAACAAGATATCAGAGAAAATATCATTTTCAGTGGCTTTCAGACAGATTGGTTGGGACTGGGCAAGTAACGTGGTTGGGGCTGGTGCAAGCTTGGGGATTGTTGCTTCACTCTTGGTTGCCATGTTAGGCCAAGCCAGGTACCTTTGTGTTATTGGCAGGGCGCGGCTAGTGCCATCCTGGTTAGCCAAGGTGCATCCTTCAACAGGCACTCCACTGAATGCCACACTCTTCCTTGGACTCTGCACAGCATCAATTGCACTCTTCACTGACCTCGAAATAGTGATTGAAATGATCTCCATCGGCACCCTCTTGGTGTTCTACCTTGTGGCCAATGCTCTCATTTATCGTCGATATGTGATCATCACCAACAACCCCCCATTTCAAACTCTCTTGTTCCTCTTCCTCCTTTCATCTAGTGCCATCGGCTTTTCCGTGTCCTGGAAGCTTAACCAACAACGCTGGGGGTTACCGCTTTTCGGAATGTCAACAGTTACCATCATTGCCTTCTTCAACTACATGGTACCTTGTGTTTGCCATCCCACTGGGTGGTCGATGCCATTCATGCCATGGCCGGCTGCACTATCTATCTTCCTTAATGTGTTTCTCATGACCACGCTAAAGAAGTTCTCATTCGAAAGGTTTGCCATATGGGCATGTTTCATAACATTGTTCTATCTATTGTATGGTGTTCACTCGACTTATAAGGCAGAGGAGAGGGAGAGTACTGGTGTTGATGAAGTGAATCCAAGCTCAGCAGTGCAACAAATAAAGCTAGATATTCAAGTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

595

Amino Acids

65.36

Weight (kDa)

8.61

Isoelectric Point (pI)

33.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	76 - 520	9.7e-49	Amino acid permease
AA_permease	PF00324	82 - 461	2.3e-25	Amino acid permease
AA_permease_C	PF13906	515 - 564	3.6e-10	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	740, 1698
Acc65I	GGTACC	2 cut(s)	1134, 1516
AccB1I	GGYRCC	3 cut(s)	1134, 1298, 1516
AccB7I	CCANNNNNTGG	2 cut(s)	413, 1542
AccII	CGCG	1 cut(s)	1159
AciI	CCGC	2 cut(s)	1159, 1466
AclWI	GGATC	2 cut(s)	557, 883
AcoI	YGGCCR	3 cut(s)	879, 1323, 1565
AcsI	RAATTY	3 cut(s)	389, 402, 452
AdeI	CACNNNGTG	1 cut(s)	1542
AfaI	GTAC	3 cut(s)	1136, 1518, 1720
AfiI	CCNNNNNNNGG	6 cut(s)	175, 413, 1199, 1434, 1472, 1542
AgsI	TTSAA	7 cut(s)	401, 873, 1197, 1283, 1379, 1507, 1778
AjnI	CCWGG	5 cut(s)	161, 174, 1130, 1172, 1433
Alw21I	GWGCWC	2 cut(s)	183, 767
AlwI	GGATC	2 cut(s)	557, 883
AlwNI	CAGNNNCTG	4 cut(s)	209, 299, 413, 910
AoxI	GGCC	5 cut(s)	879, 966, 1123, 1323, 1565
ApeKI	GCWGC	3 cut(s)	509, 830, 1571
ApoI	RAATTY	3 cut(s)	389, 402, 452
Asp718I	GGTACC	2 cut(s)	1134, 1516
AspLEI	GCGC	2 cut(s)	799, 1159
AspS9I	GGNCC	2 cut(s)	165, 320
AsuHPI	GGTGA	2 cut(s)	790, 1351
AsuII	TTCGAA	1 cut(s)	1629
AvaII	GGWCC	2 cut(s)	165, 320
AxyI	CCTNAGG	1 cut(s)	786
BaeI	ACNNNNGTAYC	2 cut(s)	1126, 1159
BalI	TGGCCA	1 cut(s)	1325
BanI	GGYRCC	3 cut(s)	1134, 1298, 1516
BanII	GRGCYC	1 cut(s)	183
BbsI	GAAGAC	1 cut(s)	322
Bbv12I	GWGCWC	2 cut(s)	183, 767
BbvI	GCAGC	3 cut(s)	496, 842, 1558
BccI	CCATC	8 cut(s)	584, 818, 979, 1177, 1301, 1424, 1499, 1539
BcgI	CGANNNNNNTGC	2 cut(s)	1619, 1653
BciT130I	CCWGG	5 cut(s)	163, 176, 1132, 1174, 1435
BclI	TGATCA	1 cut(s)	1353
BfaI	CTAG	4 cut(s)	794, 1163, 1410, 1769
BfmI	CTRYAG	2 cut(s)	300, 834
BfoI	RGCGCY	1 cut(s)	800
BglI	GCCNNNNNGGC	1 cut(s)	1646
BisI	GCNGC	4 cut(s)	510, 831, 1160, 1572
BlpI	GCTNAGC	1 cut(s)	1747
BlsI	GCNGC	4 cut(s)	511, 832, 1161, 1573
BmcAI	AGTACT	1 cut(s)	1720
Bme1390I	CCNGG	5 cut(s)	163, 176, 1132, 1174, 1435
Bme18I	GGWCC	2 cut(s)	165, 320
BmgT120I	GGNCC	2 cut(s)	165, 320
BmiI	GGNNCC	6 cut(s)	167, 931, 990, 1136, 1300, 1518
BmrFI	CCNGG	5 cut(s)	163, 176, 1132, 1174, 1435
BmrI	ACTGGG	2 cut(s)	1063, 1548
BmsI	GCATC	4 cut(s)	930, 1198, 1253, 1539
BmuI	ACTGGG	2 cut(s)	1063, 1548
BpiI	GAAGAC	1 cut(s)	322
Bpu1102I	GCTNAGC	1 cut(s)	1747
Bpu14I	TTCGAA	1 cut(s)	1629
BpuEI	CTTGAG	1 cut(s)	212
BsaBI	GATNNNNATC	1 cut(s)	1292
BsaJI	CCNNGG	5 cut(s)	566, 876, 1182, 1228, 1562
BsaXI	ACNNNNNCTCC	8 cut(s)	49, 79, 270, 300, 441, 471, 1189, 1219
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 413, 1199, 1434, 1472, 1542
Bse118I	RCCGGY	1 cut(s)	1567
Bse1I	ACTGG	6 cut(s)	19, 87, 407, 1058, 1543, 1726
Bse21I	CCTNAGG	1 cut(s)	786
Bse3DI	GCAATG	2 cut(s)	345, 1494
Bse8I	GATNNNNATC	1 cut(s)	1292
BseBI	CCWGG	5 cut(s)	163, 176, 1132, 1174, 1435
BseDI	CCNNGG	5 cut(s)	566, 876, 1182, 1228, 1562
BseGI	GGATG	4 cut(s)	595, 1169, 1189, 1531
BseJI	GATNNNNATC	1 cut(s)	1292
BseLI	CCNNNNNNNGG	6 cut(s)	175, 413, 1199, 1434, 1472, 1542
BseMI	GCAATG	2 cut(s)	345, 1494
BseMII	CTCAG	3 cut(s)	154, 448, 1761
BseNI	ACTGG	6 cut(s)	19, 87, 407, 1058, 1543, 1726
BseRI	GAGGAG	3 cut(s)	57, 828, 1721
BseXI	GCAGC	3 cut(s)	496, 842, 1558
BseYI	CCCAGC	3 cut(s)	470, 625, 1455
BsgI	GTGCAG	2 cut(s)	1222, 1557
Bsh1236I	CGCG	1 cut(s)	1159
BshFI	GGCC	5 cut(s)	881, 968, 1125, 1325, 1567
BshNI	GGYRCC	3 cut(s)	1134, 1298, 1516
BsiHKAI	GWGCWC	2 cut(s)	183, 767
BsiSI	CCGG	1 cut(s)	1568
BslFI	GGGAC	3 cut(s)	106, 804, 1064
BslI	CCNNNNNNNGG	6 cut(s)	175, 413, 1199, 1434, 1472, 1542
BsmFI	GGGAC	3 cut(s)	106, 804, 1064
BsmI	GAATGC	2 cut(s)	156, 1219
BsnI	GGCC	5 cut(s)	881, 968, 1125, 1325, 1567
Bsp119I	TTCGAA	1 cut(s)	1629
Bsp1286I	GDGCHC	2 cut(s)	183, 767
Bsp143I	GATC	5 cut(s)	238, 562, 888, 1287, 1353
Bsp1720I	GCTNAGC	1 cut(s)	1747
Bsp19I	CCATGG	2 cut(s)	876, 1562
BspACI	CCGC	2 cut(s)	1159, 1466
BspANI	GGCC	5 cut(s)	881, 968, 1125, 1325, 1567
BspCNI	CTCAG	3 cut(s)	153, 447, 1760
BspFNI	CGCG	1 cut(s)	1159
BspHI	TCATGA	1 cut(s)	1602
BspLI	GGNNCC	6 cut(s)	167, 931, 990, 1136, 1300, 1518
BspPI	GGATC	2 cut(s)	557, 883
BspT104I	TTCGAA	1 cut(s)	1629
BspT107I	GGYRCC	3 cut(s)	1134, 1298, 1516
BsrDI	GCAATG	2 cut(s)	345, 1494
BsrFI	RCCGGY	1 cut(s)	1567
BsrI	ACTGG	6 cut(s)	19, 87, 407, 1058, 1543, 1726
BssAI	RCCGGY	1 cut(s)	1567
BssECI	CCNNGG	5 cut(s)	566, 876, 1182, 1228, 1562
BssMI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
BssT1I	CCWWGG	4 cut(s)	876, 1182, 1228, 1562
Bst2UI	CCWGG	5 cut(s)	163, 176, 1132, 1174, 1435
Bst4CI	ACNGT	2 cut(s)	709, 1486
Bst6I	CTCTTC	5 cut(s)	212, 879, 1229, 1262, 1400
BstAPI	GCANNNNNTGC	2 cut(s)	910, 1250
BstBI	TTCGAA	1 cut(s)	1629
BstC8I	GCNNGC	5 cut(s)	156, 266, 911, 1084, 1569
BstDEI	CTNAG	4 cut(s)	140, 434, 786, 1747
BstDSI	CCRYGG	2 cut(s)	876, 1562
BstEII	GGTNACC	1 cut(s)	1461
BstENI	CCTNNNNNAGG	1 cut(s)	1197
BstF5I	GGATG	4 cut(s)	595, 1169, 1189, 1531
BstFNI	CGCG	1 cut(s)	1159
BstH2I	RGCGCY	1 cut(s)	800
BstHHI	GCGC	2 cut(s)	799, 1159
BstKTI	GATC	5 cut(s)	241, 565, 891, 1290, 1356
BstMBI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
BstNI	CCWGG	5 cut(s)	163, 176, 1132, 1174, 1435
BstNSI	RCATGY	2 cut(s)	268, 1653
BstPI	GGTNACC	1 cut(s)	1461
BstSCI	CCNGG	5 cut(s)	161, 174, 1130, 1172, 1433
BstSFI	CTRYAG	2 cut(s)	300, 834
BstUI	CGCG	1 cut(s)	1159
BstV1I	GCAGC	3 cut(s)	496, 842, 1558
BstV2I	GAAGAC	1 cut(s)	322
BstX2I	RGATCY	1 cut(s)	888
BstXI	CCANNNNNNTGG	2 cut(s)	775, 1538
BstYI	RGATCY	1 cut(s)	888
Bsu36I	CCTNAGG	1 cut(s)	786
BsuRI	GGCC	5 cut(s)	881, 968, 1125, 1325, 1567
BtgI	CCRYGG	2 cut(s)	876, 1562
BtsCI	GGATG	4 cut(s)	595, 1169, 1189, 1531
BtsI	GCAGTG	1 cut(s)	1758
BtsIMutI	CAGTG	7 cut(s)	384, 689, 1032, 1208, 1260, 1536, 1758
Cac8I	GCNNGC	5 cut(s)	156, 266, 911, 1084, 1569
CaiI	CAGNNNCTG	4 cut(s)	209, 299, 413, 910
CciI	TCATGA	1 cut(s)	1602
CfoI	GCGC	2 cut(s)	799, 1159
Cfr10I	RCCGGY	1 cut(s)	1567
Cfr13I	GGNCC	2 cut(s)	165, 320
Csp6I	GTAC	3 cut(s)	1135, 1517, 1719
CspCI	CAANNNNNGTGG	2 cut(s)	1047, 1082
CviQI	GTAC	3 cut(s)	1135, 1517, 1719
DdeI	CTNAG	4 cut(s)	140, 434, 786, 1747
DpnI	GATC	5 cut(s)	240, 564, 890, 1289, 1355
DpnII	GATC	5 cut(s)	238, 562, 888, 1287, 1353
DraIII	CACNNNGTG	1 cut(s)	1542
EaeI	YGGCCR	3 cut(s)	879, 1323, 1565
Eam1104I	CTCTTC	5 cut(s)	212, 879, 1229, 1262, 1400
EarI	CTCTTC	5 cut(s)	212, 879, 1229, 1262, 1400
Ecl136II	GAGCTC	1 cut(s)	181
Eco130I	CCWWGG	4 cut(s)	876, 1182, 1228, 1562
Eco24I	GRGCYC	1 cut(s)	183
Eco32I	GATATC	1 cut(s)	1005
Eco47I	GGWCC	2 cut(s)	165, 320
Eco53kI	GAGCTC	1 cut(s)	181
Eco81I	CCTNAGG	1 cut(s)	786
Eco91I	GGTNACC	1 cut(s)	1461
EcoICRI	GAGCTC	1 cut(s)	181
EcoNI	CCTNNNNNAGG	1 cut(s)	1197
EcoO65I	GGTNACC	1 cut(s)	1461
EcoRII	CCWGG	5 cut(s)	161, 174, 1130, 1172, 1433
EcoRV	GATATC	1 cut(s)	1005
EcoT14I	CCWWGG	4 cut(s)	876, 1182, 1228, 1562
EcoT38I	GRGCYC	1 cut(s)	183
ErhI	CCWWGG	4 cut(s)	876, 1182, 1228, 1562
FaqI	GGGAC	3 cut(s)	106, 804, 1064
FauNDI	CATATG	1 cut(s)	1643
FbaI	TGATCA	1 cut(s)	1353
Fnu4HI	GCNGC	4 cut(s)	510, 831, 1160, 1572
FokI	GGATG	4 cut(s)	602, 1156, 1176, 1518
FriOI	GRGCYC	1 cut(s)	183
Fsp4HI	GCNGC	4 cut(s)	510, 831, 1160, 1572
FspBI	CTAG	4 cut(s)	794, 1163, 1410, 1769
GlaI	GCGC	2 cut(s)	798, 1158
GluI	GCNGC	4 cut(s)	510, 831, 1160, 1572
GsaI	CCCAGC	3 cut(s)	474, 629, 1459
HaeII	RGCGCY	1 cut(s)	800
HaeIII	GGCC	5 cut(s)	881, 968, 1125, 1325, 1567
HapII	CCGG	1 cut(s)	1568
HhaI	GCGC	2 cut(s)	799, 1159
Hin6I	GCGC	2 cut(s)	797, 1157
HinP1I	GCGC	2 cut(s)	797, 1157
HincII	GTYRAC	1 cut(s)	1482
HindII	GTYRAC	1 cut(s)	1482
HindIII	AAGCTT	2 cut(s)	1084, 1439
HinfI	GANTC	4 cut(s)	279, 863, 1233, 1738
HpaII	CCGG	1 cut(s)	1568
HphI	GGTGA	2 cut(s)	790, 1351
Hpy166II	GTNNAC	2 cut(s)	1482, 1687
Hpy188I	TCNGA	6 cut(s)	143, 437, 567, 1009, 1037, 1475
Hpy188III	TCNNGA	2 cut(s)	821, 1603
Hpy8I	GTNNAC	2 cut(s)	1482, 1687
Hpy99I	CGWCG	2 cut(s)	920, 1347
HpyAV	CCTTC	5 cut(s)	333, 374, 909, 1203, 1510
HpyCH4III	ACNGT	2 cut(s)	709, 1486
HpyCH4IV	ACGT	1 cut(s)	1065
HpyF3I	CTNAG	4 cut(s)	140, 434, 786, 1747
HpySE526I	ACGT	1 cut(s)	1065
HspAI	GCGC	2 cut(s)	797, 1157
KpnI	GGTACC	2 cut(s)	1138, 1520
KroI	GCCGGC	1 cut(s)	1567
KroNI	GCCGGC	1 cut(s)	1569
Ksp22I	TGATCA	1 cut(s)	1353
Kzo9I	GATC	5 cut(s)	238, 562, 888, 1287, 1353
LmnI	GCTCC	3 cut(s)	178, 689, 762
Lsp1109I	GCAGC	3 cut(s)	496, 842, 1558
LweI	GCATC	4 cut(s)	930, 1198, 1253, 1539
MaeI	CTAG	4 cut(s)	794, 1163, 1410, 1769
MaeII	ACGT	1 cut(s)	1065
MaeIII	GTNAC	7 cut(s)	286, 380, 439, 848, 1061, 1461, 1486
MalI	GATC	5 cut(s)	240, 564, 890, 1289, 1355
MboI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
MfeI	CAATTG	1 cut(s)	1248
MflI	RGATCY	1 cut(s)	888
MhlI	GDGCHC	2 cut(s)	183, 767
MlsI	TGGCCA	1 cut(s)	1325
MluCI	AATT	5 cut(s)	389, 402, 452, 741, 1248
MluNI	TGGCCA	1 cut(s)	1325
MlyI	GAGTC	2 cut(s)	288, 1227
MmeI	TCCRAC	4 cut(s)	126, 238, 256, 597
Mox20I	TGGCCA	1 cut(s)	1325
MroNI	GCCGGC	1 cut(s)	1567
MscI	TGGCCA	1 cut(s)	1325
MseI	TTAA	2 cut(s)	1443, 1590
Msp20I	TGGCCA	1 cut(s)	1325
MspA1I	CMGCKG	2 cut(s)	317, 629
MspI	CCGG	1 cut(s)	1568
MspR9I	CCNGG	5 cut(s)	163, 176, 1132, 1174, 1435
MunI	CAATTG	1 cut(s)	1248
Mva1269I	GAATGC	2 cut(s)	156, 1219
MvaI	CCWGG	5 cut(s)	163, 176, 1132, 1174, 1435
MvnI	CGCG	1 cut(s)	1159
NaeI	GCCGGC	1 cut(s)	1569
NcoI	CCATGG	2 cut(s)	876, 1562
NdeI	CATATG	1 cut(s)	1643
NdeII	GATC	5 cut(s)	238, 562, 888, 1287, 1353
NgoMIV	GCCGGC	1 cut(s)	1567
NlaIV	GGNNCC	6 cut(s)	167, 931, 990, 1136, 1300, 1518
NmuCI	GTSAC	2 cut(s)	286, 439
NspI	RCATGY	2 cut(s)	268, 1653
NspV	TTCGAA	1 cut(s)	1629
PaeI	GCATGC	1 cut(s)	268
PagI	TCATGA	1 cut(s)	1602
PcsI	WCGNNNNNNNCGW	1 cut(s)	1425
PctI	GAATGC	2 cut(s)	156, 1219
PdiI	GCCGGC	1 cut(s)	1569
PfeI	GAWTC	2 cut(s)	863, 1738
PflMI	CCANNNNNTGG	2 cut(s)	413, 1542
PfoI	TCCNGGA	1 cut(s)	1433
PkrI	GCNGC	4 cut(s)	511, 832, 1161, 1573
PleI	GAGTC	2 cut(s)	287, 1227
PpsI	GAGTC	2 cut(s)	287, 1227
PsiI	TTATAA	2 cut(s)	740, 1698
Psp124BI	GAGCTC	1 cut(s)	183
Psp6I	CCWGG	5 cut(s)	161, 174, 1130, 1172, 1433
PspEI	GGTNACC	1 cut(s)	1461
PspFI	CCCAGC	3 cut(s)	470, 625, 1455
PspGI	CCWGG	5 cut(s)	161, 174, 1130, 1172, 1433
PspN4I	GGNNCC	6 cut(s)	167, 931, 990, 1136, 1300, 1518
PspPI	GGNCC	2 cut(s)	165, 320
PstNI	CAGNNNCTG	4 cut(s)	209, 299, 413, 910
PsuI	RGATCY	1 cut(s)	888
PvuII	CAGCTG	2 cut(s)	317, 629
RsaI	GTAC	3 cut(s)	1136, 1518, 1720
RsaNI	GTAC	3 cut(s)	1135, 1517, 1719
SacI	GAGCTC	1 cut(s)	183
SaqAI	TTAA	2 cut(s)	1443, 1590
SatI	GCNGC	4 cut(s)	510, 831, 1160, 1572
Sau3AI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
Sau96I	GGNCC	2 cut(s)	165, 320
ScaI	AGTACT	1 cut(s)	1720
SchI	GAGTC	2 cut(s)	288, 1227
ScrFI	CCNGG	5 cut(s)	163, 176, 1132, 1174, 1435
SduI	GDGCHC	2 cut(s)	183, 767
SfaNI	GCATC	4 cut(s)	930, 1198, 1253, 1539
SfcI	CTRYAG	2 cut(s)	300, 834
SfuI	TTCGAA	1 cut(s)	1629
SinI	GGWCC	2 cut(s)	165, 320
SmlI	CTYRAG	1 cut(s)	227
SmoI	CTYRAG	1 cut(s)	227
SphI	GCATGC	1 cut(s)	268
Sse9I	AATT	5 cut(s)	389, 402, 452, 741, 1248
SsiI	CCGC	2 cut(s)	1159, 1466
SspMI	CTAG	4 cut(s)	794, 1163, 1410, 1769
SstI	GAGCTC	1 cut(s)	183
StyD4I	CCNGG	5 cut(s)	161, 174, 1130, 1172, 1433
StyI	CCWWGG	4 cut(s)	876, 1182, 1228, 1562
TaaI	ACNGT	2 cut(s)	709, 1486
TaiI	ACGT	1 cut(s)	1068
TaqI	TCGA	5 cut(s)	1269, 1345, 1547, 1629, 1691
TasI	AATT	5 cut(s)	389, 402, 452, 741, 1248
TatI	WGTACW	1 cut(s)	1718
TauI	GCSGC	1 cut(s)	1162
TfiI	GAWTC	2 cut(s)	863, 1738
Tru1I	TTAA	2 cut(s)	1443, 1590
Tru9I	TTAA	2 cut(s)	1443, 1590
TscAI	CASTG	7 cut(s)	391, 696, 1032, 1215, 1267, 1543, 1758
TseFI	GTSAC	2 cut(s)	286, 439
TseI	GCWGC	3 cut(s)	509, 830, 1571
Tsp45I	GTSAC	2 cut(s)	286, 439
TspDTI	ATGAA	7 cut(s)	230, 322, 704, 1395, 1546, 1645, 1746
TspGWI	ACGGA	2 cut(s)	922, 1417
TspRI	CASTG	7 cut(s)	391, 696, 1032, 1215, 1267, 1543, 1758
Van91I	CCANNNNNTGG	2 cut(s)	413, 1542
VpaK11BI	GGWCC	2 cut(s)	165, 320
XagI	CCTNNNNNAGG	1 cut(s)	1197
XapI	RAATTY	3 cut(s)	389, 402, 452
XceI	RCATGY	2 cut(s)	268, 1653
XcmI	CCANNNNNNNNNTGG	2 cut(s)	314, 1560
XspI	CTAG	4 cut(s)	794, 1163, 1410, 1769
ZrmI	AGTACT	1 cut(s)	1720

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.