Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Reverse (-)

46151008 .. 46153714

Gene Structure 2707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00252110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGGAAGCCAAAACACTCCAGTATAGTTTTGCAAACATGGCTTCCACCACCACCACAACTCAAACTCCTCCCAACAACACAAACACCAGTCTTTGCTTCTCCAACTATCTCCAATCCCTGTCCCAAACACCCCACAGGCTCAGAAAGAGAATGCTTGCCACCTGGACCCCAGACCAGGAGCTCAACCAAGTGAGGCAAAGGTCAGGGGCTGATATGAAGAGAAAACTCAAGTGGTATGATCTCATGGCTCTTGGTGTTGGAGGCATGCTTGGCGTTGGAGTCTTTGTCACAACAGGTTCTGTAGCCCACAAAACAGCTGGTCCTTCTGTCTTCATATCCTATATCATTGCAGGAATATCAGCCCTTCTTTCTTCCTTGTGTTACACTGAATTTTCTGTTCAAATTCCAGTTGCTGGTGGTGCTTTTAGTTATCTCAGAGTGACTTTTGGAGAATTTGTCGGTTATTTTGCTGGGGCAAATATACTCATGGAGTATGTATTGTCAAATGCTGCTGTGGCAAGGAGTTTTACTGAGTATTTATCCTCTGCATTTGGAGAAGATGATCCGAGGACATGGAGAGTAGAAGTGGATGGATTAGTCAAGGGCTATAATATGTTGGACTTCCCAGCTGTTGCTCTTATTCTACTTCTCACTTTCTGCCTTTGCCATAGCACAAAGGAAAGCTCCACACTGAACCTTGTTATGACGGTGTTTCATGTGGTGTTCTTTGGATTTATTATAATTGCTGGTTTCTGCATTGGGAGCACCAACAACTTGGTGAAGCCTAAGGGACTAGCACCTTTTGGTGTTAGAGGTGTTCTTGATGGGGCAGCTATAGTTTATTTCAGTTACATCGGCTACGATTCAGCTTCAACCATGGCCGAAGAGATCCAAAACCCTTCGCAGAGCCTGCCCGTCGGCATCATTGGTTCCGTTGTCATTACCTCCATGCTTTATTGCCTTATGGCCTTGTCCTTGTGTTTGATGGTTCCTTACAACAAGATATCAGAGAAAATATCATTTTCAGTGGCTTTCAGACAGATTGGTTGGGACTGGGCAAGTAACTTGGTTGGGGCTGGTGCAAGCTTGGGGATTGTTGCTTCACTCTTGGTTGCCATGTTAGGCCAAGCCAGGTACCTTTGTGTTATTGGAAGGGCGCGGCTAGTGCCATCCTGGTTAGCCAAGGTGCATCCTTCAACAGGCACTCCACTGAATGCCACACTCTTCCTGGGACTCTGCACAGCATCAATTGCACTCTTCACTGACCTCGAAATAGTGATTGAAATGATCTCCATCGGCACCCTCTTGGTGTTCTACCTTGTGGCCAATGCACTCATTTATCGTCGATATGTGATCATCGCCAACAGCCCCCATTTCAAACTCTCTTGTTCCTCTTCCTCCTTTCATCTAGTGCCATCGGCTTTTCCGTGTCCTGGAAGCTTAACCAACAACACTGGGGGTTACCGCTTTTCGGAATGTCAACTGTTACCATCATTGCCTTCTTCAACTACATGGTTTGCCGTATGGGCATGTTTCATAACATTGTTCTATCTACTGTATGGTGTTCACTCGACTTATACGGCAGAGGAGAGGGAGAGTACTGGTGTTGATGAAGTGAATCCAAGCTCAGCAGTGCAACAAATAAAGCTAGATATTCAAGTAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

555

Amino Acids

60.32

Weight (kDa)

7.89

Isoelectric Point (pI)

33.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	76 - 449	5e-49	Amino acid permease
AA_permease	PF00324	82 - 447	2.2e-29	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	740
Acc65I	GGTACC	1 cut(s)	1134
AccB1I	GGYRCC	2 cut(s)	1134, 1298
AccB7I	CCANNNNNTGG	1 cut(s)	413
AccII	CGCG	1 cut(s)	1159
AciI	CCGC	2 cut(s)	1159, 1465
AclWI	GGATC	2 cut(s)	557, 883
AcoI	YGGCCR	2 cut(s)	879, 1323
AcsI	RAATTY	3 cut(s)	389, 402, 452
AfaI	GTAC	2 cut(s)	1136, 1600
AfiI	CCNNNNNNNGG	5 cut(s)	175, 413, 1199, 1433, 1471
AgsI	TTSAA	7 cut(s)	401, 873, 1197, 1283, 1378, 1506, 1658
AjnI	CCWGG	6 cut(s)	161, 174, 1130, 1172, 1227, 1432
Alw21I	GWGCWC	2 cut(s)	183, 767
AlwI	GGATC	2 cut(s)	557, 883
AlwNI	CAGNNNCTG	4 cut(s)	209, 299, 413, 910
AoxI	GGCC	4 cut(s)	879, 966, 1123, 1323
ApeKI	GCWGC	2 cut(s)	509, 830
ApoI	RAATTY	3 cut(s)	389, 402, 452
Asp718I	GGTACC	1 cut(s)	1134
AspLEI	GCGC	1 cut(s)	1159
AspS9I	GGNCC	2 cut(s)	165, 320
AsuHPI	GGTGA	1 cut(s)	790
AvaII	GGWCC	2 cut(s)	165, 320
AxyI	CCTNAGG	1 cut(s)	786
BaeI	ACNNNNGTAYC	2 cut(s)	1126, 1159
BalI	TGGCCA	1 cut(s)	1325
BanI	GGYRCC	2 cut(s)	1134, 1298
BanII	GRGCYC	1 cut(s)	183
BbsI	GAAGAC	1 cut(s)	322
Bbv12I	GWGCWC	2 cut(s)	183, 767
BbvI	GCAGC	2 cut(s)	496, 842
BccI	CCATC	7 cut(s)	584, 818, 979, 1177, 1301, 1423, 1498
BceAI	ACGGC	2 cut(s)	1505, 1596
BciT130I	CCWGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
BclI	TGATCA	1 cut(s)	1353
BfaI	CTAG	4 cut(s)	794, 1163, 1409, 1649
BfmI	CTRYAG	2 cut(s)	300, 834
BglI	GCCNNNNNGGC	1 cut(s)	1526
BisI	GCNGC	3 cut(s)	510, 831, 1160
BlpI	GCTNAGC	1 cut(s)	1627
BlsI	GCNGC	3 cut(s)	511, 832, 1161
BmcAI	AGTACT	1 cut(s)	1600
Bme1390I	CCNGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
Bme18I	GGWCC	2 cut(s)	165, 320
BmgT120I	GGNCC	2 cut(s)	165, 320
BmiI	GGNNCC	5 cut(s)	167, 931, 990, 1136, 1300
BmrFI	CCNGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
BmrI	ACTGGG	2 cut(s)	1063, 1464
BmsI	GCATC	3 cut(s)	930, 1198, 1253
BmuI	ACTGGG	2 cut(s)	1063, 1464
BpiI	GAAGAC	1 cut(s)	322
Bpu1102I	GCTNAGC	1 cut(s)	1627
BpuEI	CTTGAG	1 cut(s)	212
BsaBI	GATNNNNATC	1 cut(s)	1292
BsaJI	CCNNGG	4 cut(s)	566, 876, 1182, 1228
BsaXI	ACNNNNNCTCC	8 cut(s)	49, 79, 270, 300, 441, 471, 1189, 1219
Bsc4I	CCNNNNNNNGG	5 cut(s)	175, 413, 1199, 1433, 1471
Bse1I	ACTGG	6 cut(s)	19, 87, 407, 1058, 1459, 1606
Bse21I	CCTNAGG	1 cut(s)	786
Bse3DI	GCAATG	2 cut(s)	345, 1493
Bse8I	GATNNNNATC	1 cut(s)	1292
BseBI	CCWGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
BseDI	CCNNGG	4 cut(s)	566, 876, 1182, 1228
BseGI	GGATG	3 cut(s)	595, 1169, 1189
BseJI	GATNNNNATC	1 cut(s)	1292
BseLI	CCNNNNNNNGG	5 cut(s)	175, 413, 1199, 1433, 1471
BseMI	GCAATG	2 cut(s)	345, 1493
BseMII	CTCAG	4 cut(s)	154, 448, 522, 1641
BseNI	ACTGG	6 cut(s)	19, 87, 407, 1058, 1459, 1606
BseRI	GAGGAG	2 cut(s)	57, 1601
BseXI	GCAGC	2 cut(s)	496, 842
BseYI	CCCAGC	2 cut(s)	470, 625
BsgI	GTGCAG	1 cut(s)	1222
Bsh1236I	CGCG	1 cut(s)	1159
BshFI	GGCC	4 cut(s)	881, 968, 1125, 1325
BshNI	GGYRCC	2 cut(s)	1134, 1298
BsiHKAI	GWGCWC	2 cut(s)	183, 767
BslFI	GGGAC	4 cut(s)	106, 804, 1064, 1245
BslI	CCNNNNNNNGG	5 cut(s)	175, 413, 1199, 1433, 1471
BsmFI	GGGAC	4 cut(s)	106, 804, 1064, 1245
BsmI	GAATGC	2 cut(s)	156, 1219
BsnI	GGCC	4 cut(s)	881, 968, 1125, 1325
Bsp1286I	GDGCHC	2 cut(s)	183, 767
Bsp143I	GATC	5 cut(s)	238, 562, 888, 1287, 1353
Bsp1720I	GCTNAGC	1 cut(s)	1627
Bsp19I	CCATGG	1 cut(s)	876
BspACI	CCGC	2 cut(s)	1159, 1465
BspANI	GGCC	4 cut(s)	881, 968, 1125, 1325
BspCNI	CTCAG	4 cut(s)	153, 447, 523, 1640
BspFNI	CGCG	1 cut(s)	1159
BspLI	GGNNCC	5 cut(s)	167, 931, 990, 1136, 1300
BspPI	GGATC	2 cut(s)	557, 883
BspT107I	GGYRCC	2 cut(s)	1134, 1298
BsrDI	GCAATG	2 cut(s)	345, 1493
BsrI	ACTGG	6 cut(s)	19, 87, 407, 1058, 1459, 1606
BssECI	CCNNGG	4 cut(s)	566, 876, 1182, 1228
BssMI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
BssT1I	CCWWGG	2 cut(s)	876, 1182
Bst2UI	CCWGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
Bst4CI	ACNGT	3 cut(s)	709, 1485, 1557
Bst6I	CTCTTC	5 cut(s)	212, 879, 1229, 1262, 1399
BstAPI	GCANNNNNTGC	2 cut(s)	910, 1250
BstC8I	GCNNGC	4 cut(s)	156, 266, 911, 1084
BstDEI	CTNAG	5 cut(s)	140, 434, 531, 786, 1627
BstDSI	CCRYGG	1 cut(s)	876
BstEII	GGTNACC	1 cut(s)	1460
BstENI	CCTNNNNNAGG	1 cut(s)	1197
BstF5I	GGATG	3 cut(s)	595, 1169, 1189
BstFNI	CGCG	1 cut(s)	1159
BstHHI	GCGC	1 cut(s)	1159
BstKTI	GATC	5 cut(s)	241, 565, 891, 1290, 1356
BstMBI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 270, 419, 515, 762, 910, 1165, 1250, 1526
BstNI	CCWGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
BstNSI	RCATGY	2 cut(s)	268, 1533
BstPI	GGTNACC	1 cut(s)	1460
BstSCI	CCNGG	6 cut(s)	161, 174, 1130, 1172, 1227, 1432
BstSFI	CTRYAG	2 cut(s)	300, 834
BstUI	CGCG	1 cut(s)	1159
BstV1I	GCAGC	2 cut(s)	496, 842
BstV2I	GAAGAC	1 cut(s)	322
BstX2I	RGATCY	1 cut(s)	888
BstXI	CCANNNNNNTGG	1 cut(s)	775
BstYI	RGATCY	1 cut(s)	888
Bsu36I	CCTNAGG	1 cut(s)	786
BsuRI	GGCC	4 cut(s)	881, 968, 1125, 1325
BtgI	CCRYGG	1 cut(s)	876
BtgZI	GCGATG	1 cut(s)	1342
BtsCI	GGATG	3 cut(s)	595, 1169, 1189
BtsI	GCAGTG	1 cut(s)	1638
BtsIMutI	CAGTG	7 cut(s)	384, 689, 1032, 1208, 1260, 1452, 1638
Cac8I	GCNNGC	4 cut(s)	156, 266, 911, 1084
CaiI	CAGNNNCTG	4 cut(s)	209, 299, 413, 910
CfoI	GCGC	1 cut(s)	1159
Cfr13I	GGNCC	2 cut(s)	165, 320
Csp6I	GTAC	2 cut(s)	1135, 1599
CviQI	GTAC	2 cut(s)	1135, 1599
DdeI	CTNAG	5 cut(s)	140, 434, 531, 786, 1627
DpnI	GATC	5 cut(s)	240, 564, 890, 1289, 1355
DpnII	GATC	5 cut(s)	238, 562, 888, 1287, 1353
EaeI	YGGCCR	2 cut(s)	879, 1323
Eam1104I	CTCTTC	5 cut(s)	212, 879, 1229, 1262, 1399
EarI	CTCTTC	5 cut(s)	212, 879, 1229, 1262, 1399
Ecl136II	GAGCTC	1 cut(s)	181
Eco130I	CCWWGG	2 cut(s)	876, 1182
Eco24I	GRGCYC	1 cut(s)	183
Eco32I	GATATC	1 cut(s)	1005
Eco47I	GGWCC	2 cut(s)	165, 320
Eco53kI	GAGCTC	1 cut(s)	181
Eco81I	CCTNAGG	1 cut(s)	786
Eco91I	GGTNACC	1 cut(s)	1460
EcoICRI	GAGCTC	1 cut(s)	181
EcoNI	CCTNNNNNAGG	1 cut(s)	1197
EcoO65I	GGTNACC	1 cut(s)	1460
EcoRII	CCWGG	6 cut(s)	161, 174, 1130, 1172, 1227, 1432
EcoRV	GATATC	1 cut(s)	1005
EcoT14I	CCWWGG	2 cut(s)	876, 1182
EcoT38I	GRGCYC	1 cut(s)	183
ErhI	CCWWGG	2 cut(s)	876, 1182
FaqI	GGGAC	4 cut(s)	106, 804, 1064, 1245
FbaI	TGATCA	1 cut(s)	1353
Fnu4HI	GCNGC	3 cut(s)	510, 831, 1160
FokI	GGATG	3 cut(s)	602, 1156, 1176
FriOI	GRGCYC	1 cut(s)	183
Fsp4HI	GCNGC	3 cut(s)	510, 831, 1160
FspBI	CTAG	4 cut(s)	794, 1163, 1409, 1649
GlaI	GCGC	1 cut(s)	1158
GluI	GCNGC	3 cut(s)	510, 831, 1160
GsaI	CCCAGC	2 cut(s)	474, 629
HaeIII	GGCC	4 cut(s)	881, 968, 1125, 1325
HhaI	GCGC	1 cut(s)	1159
Hin6I	GCGC	1 cut(s)	1157
HinP1I	GCGC	1 cut(s)	1157
HincII	GTYRAC	1 cut(s)	1481
HindII	GTYRAC	1 cut(s)	1481
HindIII	AAGCTT	2 cut(s)	1084, 1438
HinfI	GANTC	4 cut(s)	279, 863, 1233, 1618
HphI	GGTGA	1 cut(s)	790
Hpy166II	GTNNAC	2 cut(s)	1481, 1567
Hpy188I	TCNGA	7 cut(s)	143, 437, 567, 1009, 1037, 1474, 1667
Hpy188III	TCNNGA	1 cut(s)	821
Hpy8I	GTNNAC	2 cut(s)	1481, 1567
Hpy99I	CGWCG	2 cut(s)	920, 1347
HpyAV	CCTTC	6 cut(s)	333, 374, 909, 1146, 1203, 1509
HpyCH4III	ACNGT	3 cut(s)	709, 1485, 1557
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 270, 419, 515, 762, 910, 1165, 1250, 1526
HpyF3I	CTNAG	5 cut(s)	140, 434, 531, 786, 1627
HspAI	GCGC	1 cut(s)	1157
KpnI	GGTACC	1 cut(s)	1138
Ksp22I	TGATCA	1 cut(s)	1353
Kzo9I	GATC	5 cut(s)	238, 562, 888, 1287, 1353
LmnI	GCTCC	3 cut(s)	178, 689, 762
Lsp1109I	GCAGC	2 cut(s)	496, 842
LweI	GCATC	3 cut(s)	930, 1198, 1253
MaeI	CTAG	4 cut(s)	794, 1163, 1409, 1649
MaeIII	GTNAC	7 cut(s)	286, 380, 439, 848, 1061, 1460, 1485
MalI	GATC	5 cut(s)	240, 564, 890, 1289, 1355
MboI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
MboII	GAAGA	9 cut(s)	229, 322, 363, 569, 896, 1216, 1249, 1386, 1494
MfeI	CAATTG	1 cut(s)	1248
MflI	RGATCY	1 cut(s)	888
MhlI	GDGCHC	2 cut(s)	183, 767
MlsI	TGGCCA	1 cut(s)	1325
MluCI	AATT	5 cut(s)	389, 402, 452, 741, 1248
MluNI	TGGCCA	1 cut(s)	1325
MlyI	GAGTC	2 cut(s)	288, 1227
MmeI	TCCRAC	4 cut(s)	126, 238, 256, 597
Mox20I	TGGCCA	1 cut(s)	1325
MscI	TGGCCA	1 cut(s)	1325
MseI	TTAA	1 cut(s)	1442
Msp20I	TGGCCA	1 cut(s)	1325
MspA1I	CMGCKG	2 cut(s)	317, 629
MspR9I	CCNGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
MunI	CAATTG	1 cut(s)	1248
Mva1269I	GAATGC	2 cut(s)	156, 1219
MvaI	CCWGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
MvnI	CGCG	1 cut(s)	1159
MwoI	GCNNNNNNNGC	9 cut(s)	38, 270, 419, 515, 762, 910, 1165, 1250, 1526
NcoI	CCATGG	1 cut(s)	876
NdeII	GATC	5 cut(s)	238, 562, 888, 1287, 1353
NlaIV	GGNNCC	5 cut(s)	167, 931, 990, 1136, 1300
NmuCI	GTSAC	2 cut(s)	286, 439
NspI	RCATGY	2 cut(s)	268, 1533
PaeI	GCATGC	1 cut(s)	268
PcsI	WCGNNNNNNNCGW	1 cut(s)	1424
PctI	GAATGC	2 cut(s)	156, 1219
PfeI	GAWTC	2 cut(s)	863, 1618
PflMI	CCANNNNNTGG	1 cut(s)	413
PfoI	TCCNGGA	1 cut(s)	1432
PkrI	GCNGC	3 cut(s)	511, 832, 1161
PleI	GAGTC	2 cut(s)	287, 1227
PpsI	GAGTC	2 cut(s)	287, 1227
PsiI	TTATAA	1 cut(s)	740
Psp124BI	GAGCTC	1 cut(s)	183
Psp6I	CCWGG	6 cut(s)	161, 174, 1130, 1172, 1227, 1432
PspEI	GGTNACC	1 cut(s)	1460
PspFI	CCCAGC	2 cut(s)	470, 625
PspGI	CCWGG	6 cut(s)	161, 174, 1130, 1172, 1227, 1432
PspN4I	GGNNCC	5 cut(s)	167, 931, 990, 1136, 1300
PspPI	GGNCC	2 cut(s)	165, 320
PstNI	CAGNNNCTG	4 cut(s)	209, 299, 413, 910
PsuI	RGATCY	1 cut(s)	888
PvuII	CAGCTG	2 cut(s)	317, 629
RsaI	GTAC	2 cut(s)	1136, 1600
RsaNI	GTAC	2 cut(s)	1135, 1599
SacI	GAGCTC	1 cut(s)	183
SaqAI	TTAA	1 cut(s)	1442
SatI	GCNGC	3 cut(s)	510, 831, 1160
Sau3AI	GATC	5 cut(s)	238, 562, 888, 1287, 1353
Sau96I	GGNCC	2 cut(s)	165, 320
ScaI	AGTACT	1 cut(s)	1600
SchI	GAGTC	2 cut(s)	288, 1227
ScrFI	CCNGG	6 cut(s)	163, 176, 1132, 1174, 1229, 1434
SduI	GDGCHC	2 cut(s)	183, 767
SfaNI	GCATC	3 cut(s)	930, 1198, 1253
SfcI	CTRYAG	2 cut(s)	300, 834
SinI	GGWCC	2 cut(s)	165, 320
SmlI	CTYRAG	1 cut(s)	227
SmoI	CTYRAG	1 cut(s)	227
SphI	GCATGC	1 cut(s)	268
Sse9I	AATT	5 cut(s)	389, 402, 452, 741, 1248
SsiI	CCGC	2 cut(s)	1159, 1465
SspMI	CTAG	4 cut(s)	794, 1163, 1409, 1649
SstI	GAGCTC	1 cut(s)	183
StyD4I	CCNGG	6 cut(s)	161, 174, 1130, 1172, 1227, 1432
StyI	CCWWGG	2 cut(s)	876, 1182
TaaI	ACNGT	3 cut(s)	709, 1485, 1557
TaqI	TCGA	3 cut(s)	1269, 1345, 1571
TasI	AATT	5 cut(s)	389, 402, 452, 741, 1248
TatI	WGTACW	1 cut(s)	1598
TauI	GCSGC	1 cut(s)	1162
TfiI	GAWTC	2 cut(s)	863, 1618
Tru1I	TTAA	1 cut(s)	1442
Tru9I	TTAA	1 cut(s)	1442
TscAI	CASTG	7 cut(s)	391, 696, 1032, 1215, 1267, 1459, 1638
TseFI	GTSAC	2 cut(s)	286, 439
TseI	GCWGC	2 cut(s)	509, 830
Tsp45I	GTSAC	2 cut(s)	286, 439
TspDTI	ATGAA	6 cut(s)	230, 322, 704, 1394, 1525, 1626
TspGWI	ACGGA	2 cut(s)	922, 1416
TspRI	CASTG	7 cut(s)	391, 696, 1032, 1215, 1267, 1459, 1638
Van91I	CCANNNNNTGG	1 cut(s)	413
VpaK11BI	GGWCC	2 cut(s)	165, 320
XagI	CCTNNNNNAGG	1 cut(s)	1197
XapI	RAATTY	3 cut(s)	389, 402, 452
XceI	RCATGY	2 cut(s)	268, 1533
XcmI	CCANNNNNNNNNTGG	2 cut(s)	314, 1225
XspI	CTAG	4 cut(s)	794, 1163, 1409, 1649
ZrmI	AGTACT	1 cut(s)	1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.