Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Forward (+)

3313953 .. 3317340

Gene Structure 3388 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G10600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGAGGCCCAATACCGGAACCACGACGGAGACACCTCTTTCTCTAGCCTCCGTGTCTACCTCAACTCTCTCTCCGACACTCCCTCCCGTTTTTCCCGCCGAGCCGTTTCCGTTTCCACCTCTTACGACGAGATGAGCCGCGTCCGCGCCGTCTCCGGCGAGCAGATGCGTCGTACTCTCCGTTGGTACGATCTCATCGGACTCGGAATCGGTGGAATGATCGGAGCCGGAGTCTTCGTCACCACCGGCCGTGCTAGTCGTCTCTACGCTGGTCCATCAATCGTCGTCTCTTACGCAATCGCCGGACTCTGTGCTCTACTCTCCGCCTTCTGTTACACCGAGTTCGCCGTTCACCTCCCCGTCGCCGGCGGTGCTTTCAGCTACATCCGTATCACATTCGGCGAGTTTCCGGCGTTTATAACCGGAGCAAATCTGATAATGGACTACGTACTGTCAAACGCCGCCGTTTCAAGAGGATTCACCGCTTATCTCGGATCTGCATTCGGAATCTCAACATCGGAGTGGAGATTCATCGTCTCCGGTCTCCCAAACGGATTCAACGAAATCGATCCCATCGCCGTTATCGTCGTCCTCGCCGTCACGTTCGTCATCTGTTACAGTACGAGAGAGAGTTCGAAGGTGAATATGGTATTAACGGCGTTACACATTGCATTTATAGTATTCGTGATCGTCATGGGTTTCTCGAAAGGAGACGTAAAGAATTTAACCCGACCCGATAACCCGGAAAACCCATCCGGATTCTTCCCGTTTGGAGTTTCGGGTGTGTTTAACGGAGCAGCAATGGTTTATCTAAGTTACATAGGATACGACGCCGTTTCGACAATGGCTGAAGAAGTAAAAGACCCAGTCAAAGACATACCAATGGGAATCTCTGGCTCAGTCGCAATCGTCATTGTACTTTACTGTTTAATGGCTATCTCTATGTCAATGCTTCTCCCGTACGATCTGATAGATGCGGAGGCACCGTATTCGGCGGCGTTTAGTAAATCGGAAGGATGGGAATGGGTGACGAGAGTGGTTGGGATTGGAGCAAGTTTCGGGATATTAACGTCGTTGATAGTAGCCATGTTGGGTCAGGCTCGGTACATGTGCGTCATCGGACGGTCAAGAGTTGTCCCCATTTGGTTTGCTAAGGTTCATCCCAAGACATCTACTCCAGTCAACGCTTCCGCTTTTCTTGGAATCTTCACGGCGGTTCTCGCCCTCTTCACCGACCTAAACGTCCTCCTAAACCTAGTCTCCATCGGAACGCTCTTCGTCTTCTATATGGTCGCAAACGCTGTTATATTTCGCCGTTACGTAACGGTCGGATACACGGAGCCATGGCCAACACTCTCCTTCCTCTGCCTATTCTCCATAACCTCAATTTTGTTTACCTTGGTCTGGCAACTTGCACCGTCGGGCCCACCTAAATGGTTCATACTTGGAGCTAGCACGGTCACGGCTATAGCCATCGTCCAGATATTCCATTGTGTTGTACCTCAAGCTAGGATCCCTGAGTTTTGGGGTGTACCGTTGATGCCGTGGACTCCATGCGTTTCGATATTTTTGAACATTTTCTTGCTTGGATCATTGGATGCTCCTTCGTATATCAGATTCGGGTTCTTCTCGGGATTAGTGGTGCTCGTGTATGTGTTTTATAGTGTTCATGCAAGCTATGATGCTGAAGGAGACGGGTCTCTTGATTTCAAAGACGTGGAAAGCCTTGAAAGAATTAACAGAGTGTTGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

584

Amino Acids

63.7

Weight (kDa)

6.33

Isoelectric Point (pI)

31.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	61 - 478	1.5e-58	Amino acid permease
AA_permease	PF00324	68 - 440	8e-33	Amino acid permease
AA_permease_C	PF13906	509 - 559	3.6e-14	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	419
AasI	GACNNNNNNGTC	1 cut(s)	1241
AccB1I	GGYRCC	1 cut(s)	982
AccI	GTMKAC	1 cut(s)	57
AccII	CGCG	2 cut(s)	141, 147
AccIII	TCCGGA	1 cut(s)	755
AclWI	GGATC	5 cut(s)	502, 563, 1507, 1520, 1597
AcoI	YGGCCR	2 cut(s)	247, 1346
AcsI	RAATTY	1 cut(s)	721
AcuI	CTGAAG	2 cut(s)	870, 1707
AcyI	GRCGYC	1 cut(s)	831
AfaI	GTAC	9 cut(s)	175, 188, 450, 622, 918, 962, 1106, 1500, 1533
AfiI	CCNNNNNNNGG	3 cut(s)	15, 365, 1404
AflIII	ACRYGT	1 cut(s)	1107
AgsI	TTSAA	5 cut(s)	471, 559, 1573, 1711, 1730
AjiI	CACGTC	1 cut(s)	1717
AluBI	AGCT	4 cut(s)	381, 1451, 1508, 1677
AluI	AGCT	4 cut(s)	381, 1451, 1508, 1677
Alw21I	GWGCWC	2 cut(s)	316, 1647
AlwI	GGATC	5 cut(s)	502, 563, 1507, 1520, 1597
Ama87I	CYCGRG	1 cut(s)	1630
Aor13HI	TCCGGA	1 cut(s)	755
AoxI	GGCC	4 cut(s)	6, 247, 1346, 1423
ApaI	GGGCCC	1 cut(s)	1427
ApeKI	GCWGC	1 cut(s)	797
ApoI	RAATTY	1 cut(s)	721
Asp700I	GAANNNNTTC	1 cut(s)	1577
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	4 cut(s)	7, 272, 1423, 1424
AsuC2I	CCSGG	1 cut(s)	743
AsuHPI	GGTGA	6 cut(s)	232, 344, 472, 652, 1039, 1222
AsuII	TTCGAA	1 cut(s)	635
AsuNHI	GCTAGC	1 cut(s)	1451
AvaI	CYCGRG	1 cut(s)	1630
AvaII	GGWCC	1 cut(s)	272
BaeGI	GKGCMC	1 cut(s)	1427
BaeI	ACNNNNGTAYC	2 cut(s)	373, 406
BalI	TGGCCA	1 cut(s)	1348
BamHI	GGATCC	1 cut(s)	1512
BanI	GGYRCC	1 cut(s)	982
BanII	GRGCYC	1 cut(s)	1427
BauI	CACGAG	1 cut(s)	1646
BbsI	GAAGAC	2 cut(s)	226, 1273
Bbv12I	GWGCWC	2 cut(s)	316, 1647
BbvI	GCAGC	1 cut(s)	809
BccI	CCATC	6 cut(s)	283, 581, 760, 1011, 1271, 1481
BcgI	CGANNNNNNTGC	4 cut(s)	152, 186, 972, 1006
BciVI	GTATCC	2 cut(s)	818, 1325
BcnI	CCSGG	1 cut(s)	743
BfaI	CTAG	5 cut(s)	45, 255, 1256, 1452, 1509
BfmI	CTRYAG	1 cut(s)	1467
BfuI	GTATCC	2 cut(s)	818, 1325
BisI	GCNGC	4 cut(s)	139, 462, 798, 996
BlsI	GCNGC	4 cut(s)	140, 463, 799, 997
Bme1390I	CCNGG	1 cut(s)	743
Bme18I	GGWCC	1 cut(s)	272
BmeT110I	CYCGRG	1 cut(s)	1630
BmgBI	CACGTC	1 cut(s)	1717
BmgT120I	GGNCC	4 cut(s)	7, 272, 1423, 1424
BmiI	GGNNCC	6 cut(s)	20, 226, 984, 1341, 1425, 1514
BmrFI	CCNGG	1 cut(s)	743
BmrI	ACTGGG	1 cut(s)	860
BmsI	GCATC	5 cut(s)	156, 964, 1530, 1588, 1672
BmtI	GCTAGC	1 cut(s)	1455
BmuI	ACTGGG	1 cut(s)	860
BpiI	GAAGAC	2 cut(s)	226, 1273
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	1 cut(s)	1152
Bpu14I	TTCGAA	1 cut(s)	635
BpuEI	CTTGAG	1 cut(s)	1488
BpuMI	CCSGG	1 cut(s)	743
Bsa29I	ATCGAT	1 cut(s)	567
BsaAI	YACGTR	2 cut(s)	448, 1321
BsaHI	GRCGYC	1 cut(s)	831
BsaI	GGTCTC	2 cut(s)	548, 1704
BsaJI	CCNNGG	3 cut(s)	1343, 1398, 1544
BsaWI	WCCGGW	4 cut(s)	15, 422, 539, 755
Bsc4I	CCNNNNNNNGG	3 cut(s)	15, 365, 1404
Bse118I	RCCGGY	2 cut(s)	245, 365
Bse1I	ACTGG	2 cut(s)	866, 1178
Bse3DI	GCAATG	2 cut(s)	666, 807
BseAI	TCCGGA	1 cut(s)	755
BseCI	ATCGAT	1 cut(s)	567
BseDI	CCNNGG	3 cut(s)	1343, 1398, 1544
BseGI	GGATG	5 cut(s)	384, 752, 1022, 1159, 1603
BseLI	CCNNNNNNNGG	3 cut(s)	15, 365, 1404
BseMI	GCAATG	2 cut(s)	666, 807
BseMII	CTCAG	2 cut(s)	912, 1509
BseNI	ACTGG	2 cut(s)	866, 1178
BseSI	GKGCMC	1 cut(s)	1427
BseX3I	CGGCCG	1 cut(s)	247
BseXI	GCAGC	1 cut(s)	809
Bsh1236I	CGCG	2 cut(s)	141, 147
Bsh1285I	CGRYCG	2 cut(s)	250, 1329
BshFI	GGCC	4 cut(s)	8, 249, 1348, 1425
BshNI	GGYRCC	1 cut(s)	982
BshVI	ATCGAT	1 cut(s)	567
BsiEI	CGRYCG	2 cut(s)	250, 1329
BsiHKAI	GWGCWC	2 cut(s)	316, 1647
BsiHKCI	CYCGRG	1 cut(s)	1630
BsiWI	CGTACG	1 cut(s)	960
BslFI	GGGAC	1 cut(s)	1121
BslI	CCNNNNNNNGG	3 cut(s)	15, 365, 1404
BsmBI	CGTCTC	6 cut(s)	157, 266, 292, 541, 705, 1686
BsmFI	GGGAC	1 cut(s)	1121
BsmI	GAATGC	1 cut(s)	500
BsnI	GGCC	4 cut(s)	8, 249, 1348, 1425
Bso31I	GGTCTC	2 cut(s)	548, 1704
BsoBI	CYCGRG	1 cut(s)	1630
Bsp119I	TTCGAA	1 cut(s)	635
Bsp120I	GGGCCC	1 cut(s)	1423
Bsp1286I	GDGCHC	3 cut(s)	316, 1427, 1647
Bsp13I	TCCGGA	1 cut(s)	755
Bsp143I	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
Bsp19I	CCATGG	1 cut(s)	1343
BspANI	GGCC	4 cut(s)	8, 249, 1348, 1425
BspCNI	CTCAG	2 cut(s)	911, 1510
BspDI	ATCGAT	1 cut(s)	567
BspEI	TCCGGA	1 cut(s)	755
BspFNI	CGCG	2 cut(s)	141, 147
BspLI	GGNNCC	6 cut(s)	20, 226, 984, 1341, 1425, 1514
BspOI	GCTAGC	1 cut(s)	1455
BspPI	GGATC	5 cut(s)	502, 563, 1507, 1520, 1597
BspQI	GCTCTTC	1 cut(s)	1280
BspT104I	TTCGAA	1 cut(s)	635
BspT107I	GGYRCC	1 cut(s)	982
BspTNI	GGTCTC	2 cut(s)	548, 1704
BsrDI	GCAATG	2 cut(s)	666, 807
BsrFI	RCCGGY	2 cut(s)	245, 365
BsrI	ACTGG	2 cut(s)	866, 1178
BssAI	RCCGGY	2 cut(s)	245, 365
BssECI	CCNNGG	3 cut(s)	1343, 1398, 1544
BssMI	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
BssNI	GRCGYC	1 cut(s)	831
BssSI	CACGAG	1 cut(s)	1646
BssT1I	CCWWGG	2 cut(s)	1343, 1398
Bst2BI	CACGAG	1 cut(s)	1646
Bst4CI	ACNGT	9 cut(s)	453, 620, 926, 987, 1125, 1327, 1419, 1459, 1536
Bst6I	CTCTTC	2 cut(s)	1232, 1280
BstACI	GRCGYC	1 cut(s)	831
BstBAI	YACGTR	2 cut(s)	448, 1321
BstBI	TTCGAA	1 cut(s)	635
BstC8I	GCNNGC	4 cut(s)	161, 367, 1453, 1675
BstDEI	CTNAG	4 cut(s)	812, 898, 1152, 1518
BstDSI	CCRYGG	2 cut(s)	1343, 1544
BstF5I	GGATG	5 cut(s)	384, 752, 1022, 1159, 1603
BstFNI	CGCG	2 cut(s)	141, 147
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	8 cut(s)	193, 222, 497, 571, 690, 967, 1515, 1592
BstMBI	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
BstMCI	CGRYCG	2 cut(s)	250, 1329
BstMWI	GCNNNNNNNGC	3 cut(s)	144, 371, 1220
BstNSI	RCATGY	1 cut(s)	1111
BstSCI	CCNGG	1 cut(s)	741
BstSFI	CTRYAG	1 cut(s)	1467
BstSLI	GKGCMC	1 cut(s)	1427
BstSNI	TACGTA	2 cut(s)	448, 1321
BstUI	CGCG	2 cut(s)	141, 147
BstV1I	GCAGC	1 cut(s)	809
BstV2I	GAAGAC	2 cut(s)	226, 1273
BstX2I	RGATCY	2 cut(s)	494, 1512
BstXI	CCANNNNNNTGG	1 cut(s)	1434
BstYI	RGATCY	2 cut(s)	494, 1512
BstZI	CGGCCG	1 cut(s)	247
Bsu15I	ATCGAT	1 cut(s)	567
BsuI	GTATCC	2 cut(s)	818, 1325
BsuRI	GGCC	4 cut(s)	8, 249, 1348, 1425
BsuTUI	ATCGAT	1 cut(s)	567
BtgI	CCRYGG	2 cut(s)	1343, 1544
BtgZI	GCGATG	1 cut(s)	559
BtrI	CACGTC	1 cut(s)	1717
BtsCI	GGATG	5 cut(s)	384, 752, 1022, 1159, 1603
Cac8I	GCNNGC	4 cut(s)	161, 367, 1453, 1675
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	2 cut(s)	245, 365
Cfr13I	GGNCC	4 cut(s)	7, 272, 1423, 1424
ClaI	ATCGAT	1 cut(s)	567
CseI	GACGC	4 cut(s)	130, 158, 839, 1102
Csp6I	GTAC	9 cut(s)	174, 187, 449, 621, 917, 961, 1105, 1499, 1532
CviAII	CATG	6 cut(s)	694, 1087, 1108, 1344, 1554, 1670
CviQI	GTAC	9 cut(s)	174, 187, 449, 621, 917, 961, 1105, 1499, 1532
DdeI	CTNAG	4 cut(s)	812, 898, 1152, 1518
DpnI	GATC	8 cut(s)	192, 221, 496, 570, 689, 966, 1514, 1591
DpnII	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
DrdI	GACNNNNNNGTC	1 cut(s)	1241
DseDI	GACNNNNNNGTC	1 cut(s)	1241
EaeI	YGGCCR	2 cut(s)	247, 1346
EagI	CGGCCG	1 cut(s)	247
Eam1104I	CTCTTC	2 cut(s)	1232, 1280
EarI	CTCTTC	2 cut(s)	1232, 1280
EciI	GGCGGA	1 cut(s)	313
EclXI	CGGCCG	1 cut(s)	247
Eco105I	TACGTA	2 cut(s)	448, 1321
Eco130I	CCWWGG	2 cut(s)	1343, 1398
Eco24I	GRGCYC	1 cut(s)	1427
Eco31I	GGTCTC	2 cut(s)	548, 1704
Eco47I	GGWCC	1 cut(s)	272
Eco52I	CGGCCG	1 cut(s)	247
Eco57I	CTGAAG	2 cut(s)	870, 1707
Eco88I	CYCGRG	1 cut(s)	1630
EcoT14I	CCWWGG	2 cut(s)	1343, 1398
EcoT38I	GRGCYC	1 cut(s)	1427
ErhI	CCWWGG	2 cut(s)	1343, 1398
Esp3I	CGTCTC	6 cut(s)	157, 266, 292, 541, 705, 1686
FaeI	CATG	6 cut(s)	697, 1090, 1111, 1347, 1557, 1673
FaqI	GGGAC	1 cut(s)	1121
FatI	CATG	6 cut(s)	693, 1086, 1107, 1343, 1553, 1669
FauI	CCCGC	1 cut(s)	104
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	4 cut(s)	139, 462, 798, 996
FokI	GGATG	5 cut(s)	371, 739, 1029, 1146, 1610
FriOI	GRGCYC	1 cut(s)	1427
Fsp4HI	GCNGC	4 cut(s)	139, 462, 798, 996
FspBI	CTAG	5 cut(s)	45, 255, 1256, 1452, 1509
GlaI	GCGC	1 cut(s)	148
GluI	GCNGC	4 cut(s)	139, 462, 798, 996
GsuI	CTGGAG	1 cut(s)	1161
HaeIII	GGCC	4 cut(s)	8, 249, 1348, 1425
HgaI	GACGC	4 cut(s)	130, 158, 839, 1102
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	1 cut(s)	831
Hin1II	CATG	6 cut(s)	697, 1090, 1111, 1347, 1557, 1673
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HincII	GTYRAC	1 cut(s)	1183
HindII	GTYRAC	1 cut(s)	1183
HphI	GGTGA	6 cut(s)	232, 344, 472, 652, 1039, 1222
Hpy166II	GTNNAC	6 cut(s)	58, 352, 1183, 1395, 1532, 1548
Hpy188III	TCNNGA	9 cut(s)	471, 685, 703, 756, 1060, 1128, 1480, 1632, 1703
Hpy8I	GTNNAC	6 cut(s)	58, 352, 1183, 1395, 1532, 1548
Hpy99I	CGWCG	9 cut(s)	29, 131, 174, 287, 365, 590, 833, 1075, 1423
HpyAV	CCTTC	6 cut(s)	337, 631, 1007, 1369, 1614, 1682
HpyCH4III	ACNGT	9 cut(s)	453, 620, 926, 987, 1125, 1327, 1419, 1459, 1536
HpyCH4IV	ACGT	7 cut(s)	447, 602, 714, 1070, 1242, 1320, 1716
HpyCH4V	TGCA	4 cut(s)	500, 671, 1415, 1673
HpyF10VI	GCNNNNNNNGC	3 cut(s)	144, 371, 1220
HpyF3I	CTNAG	4 cut(s)	812, 898, 1152, 1518
HpySE526I	ACGT	7 cut(s)	447, 602, 714, 1070, 1242, 1320, 1716
Hsp92I	GRCGYC	1 cut(s)	831
Hsp92II	CATG	6 cut(s)	697, 1090, 1111, 1347, 1557, 1673
HspAI	GCGC	1 cut(s)	147
Kpn2I	TCCGGA	1 cut(s)	755
KroI	GCCGGC	1 cut(s)	365
KroNI	GCCGGC	1 cut(s)	367
Kzo9I	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
LguI	GCTCTTC	1 cut(s)	1280
LmnI	GCTCC	7 cut(s)	224, 425, 794, 1049, 1339, 1448, 1606
Lsp1109I	GCAGC	1 cut(s)	809
LweI	GCATC	5 cut(s)	156, 964, 1530, 1588, 1672
MaeI	CTAG	5 cut(s)	45, 255, 1256, 1452, 1509
MaeII	ACGT	7 cut(s)	447, 602, 714, 1070, 1242, 1320, 1716
MalI	GATC	8 cut(s)	192, 221, 496, 570, 689, 966, 1514, 1591
MboI	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
MboII	GAAGA	8 cut(s)	226, 754, 863, 1198, 1219, 1267, 1273, 1618
MflI	RGATCY	2 cut(s)	494, 1512
MhlI	GDGCHC	3 cut(s)	316, 1427, 1647
MlsI	TGGCCA	1 cut(s)	1348
MluCI	AATT	3 cut(s)	721, 1386, 1734
MluNI	TGGCCA	1 cut(s)	1348
MlyI	GAGTC	4 cut(s)	195, 240, 300, 1543
MmeI	TCCRAC	2 cut(s)	99, 1309
Mox20I	TGGCCA	1 cut(s)	1348
MreI	CGCCGGCG	1 cut(s)	365
MroI	TCCGGA	1 cut(s)	755
MroNI	GCCGGC	1 cut(s)	365
MroXI	GAANNNNTTC	1 cut(s)	1577
MscI	TGGCCA	1 cut(s)	1348
MseI	TTAA	7 cut(s)	653, 725, 789, 929, 1067, 1737, 1753
MslI	CAYNNNNRTG	3 cut(s)	520, 881, 1432
Msp20I	TGGCCA	1 cut(s)	1348
MspR9I	CCNGG	1 cut(s)	743
Mva1269I	GAATGC	1 cut(s)	500
MvnI	CGCG	2 cut(s)	141, 147
MwoI	GCNNNNNNNGC	3 cut(s)	144, 371, 1220
NaeI	GCCGGC	1 cut(s)	367
NciI	CCSGG	1 cut(s)	743
NcoI	CCATGG	1 cut(s)	1343
NdeII	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
NgoMIV	GCCGGC	1 cut(s)	365
NheI	GCTAGC	1 cut(s)	1451
NlaIII	CATG	6 cut(s)	697, 1090, 1111, 1347, 1557, 1673
NlaIV	GGNNCC	6 cut(s)	20, 226, 984, 1341, 1425, 1514
NmeAIII	GCCGAG	1 cut(s)	125
NmuCI	GTSAC	4 cut(s)	238, 598, 1027, 1459
NspI	RCATGY	1 cut(s)	1111
NspV	TTCGAA	1 cut(s)	635
PciI	ACATGT	1 cut(s)	1107
PciSI	GCTCTTC	1 cut(s)	1280
PcsI	WCGNNNNNNNCGW	4 cut(s)	178, 558, 582, 594
PctI	GAATGC	1 cut(s)	500
PdiI	GCCGGC	1 cut(s)	367
PdmI	GAANNNNTTC	1 cut(s)	1577
PfeI	GAWTC	9 cut(s)	207, 477, 507, 528, 555, 759, 888, 1203, 1617
Pfl23II	CGTACG	1 cut(s)	960
PflFI	GACNNNGTC	1 cut(s)	866
PkrI	GCNGC	4 cut(s)	140, 463, 799, 997
PleI	GAGTC	4 cut(s)	195, 239, 300, 1543
PpsI	GAGTC	4 cut(s)	195, 239, 300, 1543
Ppu21I	YACGTR	2 cut(s)	448, 1321
PscI	ACATGT	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	419
PspLI	CGTACG	1 cut(s)	960
PspN4I	GGNNCC	6 cut(s)	20, 226, 984, 1341, 1425, 1514
PspOMI	GGGCCC	1 cut(s)	1423
PspPI	GGNCC	4 cut(s)	7, 272, 1423, 1424
PsuI	RGATCY	2 cut(s)	494, 1512
PsyI	GACNNNGTC	1 cut(s)	866
RsaI	GTAC	9 cut(s)	175, 188, 450, 622, 918, 962, 1106, 1500, 1533
RsaNI	GTAC	9 cut(s)	174, 187, 449, 621, 917, 961, 1105, 1499, 1532
RseI	CAYNNNNRTG	3 cut(s)	520, 881, 1432
SapI	GCTCTTC	1 cut(s)	1280
SaqAI	TTAA	7 cut(s)	653, 725, 789, 929, 1067, 1737, 1753
SatI	GCNGC	4 cut(s)	139, 462, 798, 996
Sau3AI	GATC	8 cut(s)	190, 219, 494, 568, 687, 964, 1512, 1589
Sau96I	GGNCC	4 cut(s)	7, 272, 1423, 1424
SchI	GAGTC	4 cut(s)	195, 240, 300, 1543
ScrFI	CCNGG	1 cut(s)	743
SduI	GDGCHC	3 cut(s)	316, 1427, 1647
SfaNI	GCATC	5 cut(s)	156, 964, 1530, 1588, 1672
SfcI	CTRYAG	1 cut(s)	1467
SfuI	TTCGAA	1 cut(s)	635
SgrAI	CRCCGGYG	1 cut(s)	365
SinI	GGWCC	1 cut(s)	272
SmiMI	CAYNNNNRTG	3 cut(s)	520, 881, 1432
SmlI	CTYRAG	1 cut(s)	1503
SmoI	CTYRAG	1 cut(s)	1503
SnaBI	TACGTA	2 cut(s)	448, 1321
Sse9I	AATT	3 cut(s)	721, 1386, 1734
SspMI	CTAG	5 cut(s)	45, 255, 1256, 1452, 1509
StyD4I	CCNGG	1 cut(s)	741
StyI	CCWWGG	2 cut(s)	1343, 1398
TaaI	ACNGT	9 cut(s)	453, 620, 926, 987, 1125, 1327, 1419, 1459, 1536
TaiI	ACGT	7 cut(s)	450, 605, 717, 1073, 1245, 1323, 1719
TaqI	TCGA	5 cut(s)	567, 635, 704, 839, 1562
TasI	AATT	3 cut(s)	721, 1386, 1734
TatI	WGTACW	1 cut(s)	916
TauI	GCSGC	3 cut(s)	141, 464, 998
TfiI	GAWTC	9 cut(s)	207, 477, 507, 528, 555, 759, 888, 1203, 1617
Tru1I	TTAA	7 cut(s)	653, 725, 789, 929, 1067, 1737, 1753
Tru9I	TTAA	7 cut(s)	653, 725, 789, 929, 1067, 1737, 1753
TseFI	GTSAC	4 cut(s)	238, 598, 1027, 1459
TseI	GCWGC	1 cut(s)	797
Tsp45I	GTSAC	4 cut(s)	238, 598, 1027, 1459
TspDTI	ATGAA	4 cut(s)	520, 1148, 1429, 1658
TspGWI	ACGGA	8 cut(s)	41, 42, 100, 170, 377, 567, 807, 1352
Tth111I	GACNNNGTC	1 cut(s)	866
VpaK11BI	GGWCC	1 cut(s)	272
XapI	RAATTY	1 cut(s)	721
XceI	RCATGY	1 cut(s)	1111
XmiI	GTMKAC	1 cut(s)	57
XmnI	GAANNNNTTC	1 cut(s)	1577
XspI	CTAG	5 cut(s)	45, 255, 1256, 1452, 1509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.