Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Reverse (-)

47656974 .. 47659585

Gene Structure 2612 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003368

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGCTTCCACCACCACCACAACTCAAACTCCTCCCAACAACACAAACACCAGTCTTTGCTTCTCCAACTATCTCGAATCCCTGTCCCAAACACCCCACAGGCTCAGAAAGAGAATGCTTGCCACCTGGACCCCAGACCAGGAGCTCAACCAAGTAAGGCAAAGGTCAGGGGCTGATATGAAGAGAAAACTCAAGTGGTATGATCTCATGGCTCTTGGTGTTGGAGGCATGCTTGGCGTTGGAGTCTTTGTCACAACAGGTTCTGTAGCCCACAAAACAGCTGGTCCTTCTGTCTTCATATCCTATATCATTGCAGGAATATCAGCCCTTCTTTCTTCCTTGTGTTACACTGAATTTTCTGTTCAAATTCCAGTTGCTGGTGGTGCTTTTAGTTATCTCAGAGTGACTTTTGGAGAATTTGTCGGTTATTTTGCTGGGGCAAATATACTCATGGAGTATGTATTGTCAAATGCTGCTGTGGCAAGGAGTTTTACTGAGTATTTATCCTCTGCATTTGGAGAAGATGATCCGAGGACATGGAGAGTAGAAGTGGATGGGTTAGTAAAGGGCTATAATATGTTGGACTTCCCAGCTGTTGCTCTTATTCTACTTCTCACTTTCTGCCTTTGCCATAGCACAAAGGAAAGCTCCACACTGAACCTTGTTATGACGGTGTTTCATGTGGTGTTCTTTGGATTTATTATAATTGTTGGTTTCTGCATTGGGAGCACCAACAACTTGGTGAAGCCTAAGGGACTAGCACCGTTTGGTGTTAAAGGTGTTCTTGATGGGGCAGCTATAGTTTATTTCAGTTACATCGGCTACGATTCAGCTTCAACCATGGCCGAAGAGATCCAAAACCCTTCACAGAGCCTGCCCGTCGGCATCATTGGTTCCGTTGTAATTACCTCCATGCTTTATTGCCTTATGGCCTTGTCCTTGTGTTTGATGGTTCCTTACAACAAGATATCAGAGAAAATATCATTTTCAGTGGCTTTCAGACAGATTGGTTGGGACTGGGCAAGTAACGTGGTTGGGGCTGGTGCAAGCTTGGGGATTGTTGCTTCACTCTTGGTTGCCATGTTAGGCCAAGCCAGGTACCTTTGTGTCATTGGAAGGGCGCGGCTAGTGCCATCCTGGTTAGCCAAGGTGCATCCTTCAACAGGCACTCCACTGAATGCCACACTCTTCCTGGGACTCTGCACAGCATCAATTGCACTCTTCACTGACCTCGAAATAGTGATTGAAATGATCTCCATCGGCACCCTCTTGGTGTTCTACCTTGTGGCCAATGCTCTCATTTATCGTCGATATGTGATCATCACCAACAACCCCCCCTTTCAAACTCTCTTGTTCCTCTTCCTCCTTTCATCTAGTGCCATCGGCTTTTCCGTGTCCTGGAAGCTTAACCAACAACGCTGGGGGTCACCGCTTTTCGGAATGTCAACAGTTACCATCATTGCCTTCTTCAACTACATGGTACCTTGTGTTTGCCATCCCACGGGGTGGTCGATGCCATTCATGCCATGGCCGGCTGCACTATCTATCTTCCTTAATGTGTTTCTCATGACCACACTAAAGAAGTTCTCATTCGAAAGGTTTGCCATATGGGCATGTTTCATAACATTGTTCTATCTACTGTATGGAGTTCACTCGACTTATAAGGCAGAGGAGAGGGAGAGTACTGGTGTTGATGAAGTGAATCCAAGCTCAGCAGTGCAACAAATAAAGCTAGATATTCAAGTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

584

Amino Acids

63.95

Weight (kDa)

8.49

Isoelectric Point (pI)

32.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	64 - 506	5.8e-49	Amino acid permease
AA_permease	PF00324	70 - 435	4.7e-26	Amino acid permease
AA_permease_C	PF13906	503 - 552	3.5e-10	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	704, 1662
Acc65I	GGTACC	2 cut(s)	1098, 1480
AccB1I	GGYRCC	3 cut(s)	1098, 1262, 1480
AccB7I	CCANNNNNTGG	2 cut(s)	377, 1506
AccII	CGCG	1 cut(s)	1123
AciI	CCGC	2 cut(s)	1123, 1430
AclWI	GGATC	2 cut(s)	521, 847
AcoI	YGGCCR	3 cut(s)	843, 1287, 1529
AcsI	RAATTY	3 cut(s)	353, 366, 416
AdeI	CACNNNGTG	1 cut(s)	1506
AfaI	GTAC	3 cut(s)	1100, 1482, 1684
AfiI	CCNNNNNNNGG	7 cut(s)	139, 377, 1163, 1398, 1436, 1501, 1506
AgsI	TTSAA	7 cut(s)	365, 837, 1161, 1247, 1343, 1471, 1742
AjnI	CCWGG	6 cut(s)	125, 138, 1094, 1136, 1191, 1397
Alw21I	GWGCWC	2 cut(s)	147, 731
AlwI	GGATC	2 cut(s)	521, 847
AlwNI	CAGNNNCTG	4 cut(s)	173, 263, 377, 874
AoxI	GGCC	5 cut(s)	843, 930, 1087, 1287, 1529
ApeKI	GCWGC	3 cut(s)	473, 794, 1535
ApoI	RAATTY	3 cut(s)	353, 366, 416
Asp718I	GGTACC	2 cut(s)	1098, 1480
AspLEI	GCGC	1 cut(s)	1123
AspS9I	GGNCC	2 cut(s)	129, 284
AsuHPI	GGTGA	3 cut(s)	754, 1315, 1419
AsuII	TTCGAA	1 cut(s)	1593
AvaII	GGWCC	2 cut(s)	129, 284
AxyI	CCTNAGG	1 cut(s)	750
BaeI	ACNNNNGTAYC	2 cut(s)	1090, 1123
BalI	TGGCCA	1 cut(s)	1289
BanI	GGYRCC	3 cut(s)	1098, 1262, 1480
BanII	GRGCYC	1 cut(s)	147
BbsI	GAAGAC	1 cut(s)	286
Bbv12I	GWGCWC	2 cut(s)	147, 731
BbvI	GCAGC	3 cut(s)	460, 806, 1522
BccI	CCATC	8 cut(s)	548, 782, 943, 1141, 1265, 1388, 1463, 1503
BcgI	CGANNNNNNTGC	2 cut(s)	1583, 1617
BciT130I	CCWGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
BclI	TGATCA	1 cut(s)	1317
BfaI	CTAG	4 cut(s)	758, 1127, 1374, 1733
BfmI	CTRYAG	2 cut(s)	264, 798
BglI	GCCNNNNNGGC	1 cut(s)	1610
BisI	GCNGC	4 cut(s)	474, 795, 1124, 1536
BlpI	GCTNAGC	1 cut(s)	1711
BlsI	GCNGC	4 cut(s)	475, 796, 1125, 1537
BmcAI	AGTACT	1 cut(s)	1684
Bme1390I	CCNGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
Bme18I	GGWCC	2 cut(s)	129, 284
BmgT120I	GGNCC	2 cut(s)	129, 284
BmiI	GGNNCC	6 cut(s)	131, 895, 954, 1100, 1264, 1482
BmrFI	CCNGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
BmrI	ACTGGG	1 cut(s)	1027
BmsI	GCATC	4 cut(s)	894, 1162, 1217, 1503
BmuI	ACTGGG	1 cut(s)	1027
BpiI	GAAGAC	1 cut(s)	286
Bpu1102I	GCTNAGC	1 cut(s)	1711
Bpu14I	TTCGAA	1 cut(s)	1593
BpuEI	CTTGAG	1 cut(s)	176
BsaBI	GATNNNNATC	1 cut(s)	1256
BsaJI	CCNNGG	6 cut(s)	530, 840, 1146, 1192, 1500, 1526
BsaXI	ACNNNNNCTCC	8 cut(s)	13, 43, 234, 264, 405, 435, 1153, 1183
Bsc4I	CCNNNNNNNGG	7 cut(s)	139, 377, 1163, 1398, 1436, 1501, 1506
Bse118I	RCCGGY	1 cut(s)	1531
Bse1I	ACTGG	4 cut(s)	51, 371, 1022, 1690
Bse21I	CCTNAGG	1 cut(s)	750
Bse3DI	GCAATG	2 cut(s)	309, 1458
Bse8I	GATNNNNATC	1 cut(s)	1256
BseBI	CCWGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
BseDI	CCNNGG	6 cut(s)	530, 840, 1146, 1192, 1500, 1526
BseGI	GGATG	4 cut(s)	559, 1133, 1153, 1495
BseJI	GATNNNNATC	1 cut(s)	1256
BseLI	CCNNNNNNNGG	7 cut(s)	139, 377, 1163, 1398, 1436, 1501, 1506
BseMI	GCAATG	2 cut(s)	309, 1458
BseMII	CTCAG	4 cut(s)	118, 412, 486, 1725
BseNI	ACTGG	4 cut(s)	51, 371, 1022, 1690
BseRI	GAGGAG	2 cut(s)	21, 1685
BseXI	GCAGC	3 cut(s)	460, 806, 1522
BseYI	CCCAGC	3 cut(s)	434, 589, 1419
BsgI	GTGCAG	2 cut(s)	1186, 1521
Bsh1236I	CGCG	1 cut(s)	1123
BshFI	GGCC	5 cut(s)	845, 932, 1089, 1289, 1531
BshNI	GGYRCC	3 cut(s)	1098, 1262, 1480
BsiHKAI	GWGCWC	2 cut(s)	147, 731
BsiSI	CCGG	1 cut(s)	1532
BslFI	GGGAC	4 cut(s)	70, 768, 1028, 1209
BslI	CCNNNNNNNGG	7 cut(s)	139, 377, 1163, 1398, 1436, 1501, 1506
BsmFI	GGGAC	4 cut(s)	70, 768, 1028, 1209
BsmI	GAATGC	2 cut(s)	120, 1183
BsnI	GGCC	5 cut(s)	845, 932, 1089, 1289, 1531
Bsp119I	TTCGAA	1 cut(s)	1593
Bsp1286I	GDGCHC	2 cut(s)	147, 731
Bsp143I	GATC	5 cut(s)	202, 526, 852, 1251, 1317
Bsp1720I	GCTNAGC	1 cut(s)	1711
Bsp19I	CCATGG	2 cut(s)	840, 1526
BspACI	CCGC	2 cut(s)	1123, 1430
BspANI	GGCC	5 cut(s)	845, 932, 1089, 1289, 1531
BspCNI	CTCAG	4 cut(s)	117, 411, 487, 1724
BspFNI	CGCG	1 cut(s)	1123
BspHI	TCATGA	1 cut(s)	1566
BspLI	GGNNCC	6 cut(s)	131, 895, 954, 1100, 1264, 1482
BspPI	GGATC	2 cut(s)	521, 847
BspT104I	TTCGAA	1 cut(s)	1593
BspT107I	GGYRCC	3 cut(s)	1098, 1262, 1480
BsrDI	GCAATG	2 cut(s)	309, 1458
BsrFI	RCCGGY	1 cut(s)	1531
BsrI	ACTGG	4 cut(s)	51, 371, 1022, 1690
BssAI	RCCGGY	1 cut(s)	1531
BssECI	CCNNGG	6 cut(s)	530, 840, 1146, 1192, 1500, 1526
BssMI	GATC	5 cut(s)	202, 526, 852, 1251, 1317
BssT1I	CCWWGG	3 cut(s)	840, 1146, 1526
Bst2UI	CCWGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
Bst4CI	ACNGT	4 cut(s)	673, 765, 1450, 1641
Bst6I	CTCTTC	5 cut(s)	176, 843, 1193, 1226, 1364
BstAPI	GCANNNNNTGC	1 cut(s)	1214
BstBI	TTCGAA	1 cut(s)	1593
BstC8I	GCNNGC	5 cut(s)	120, 230, 875, 1048, 1533
BstDEI	CTNAG	5 cut(s)	104, 398, 495, 750, 1711
BstDSI	CCRYGG	3 cut(s)	840, 1500, 1526
BstEII	GGTNACC	1 cut(s)	1425
BstENI	CCTNNNNNAGG	1 cut(s)	1161
BstF5I	GGATG	4 cut(s)	559, 1133, 1153, 1495
BstFNI	CGCG	1 cut(s)	1123
BstHHI	GCGC	1 cut(s)	1123
BstKTI	GATC	5 cut(s)	205, 529, 855, 1254, 1320
BstMBI	GATC	5 cut(s)	202, 526, 852, 1251, 1317
BstMWI	GCNNNNNNNGC	8 cut(s)	234, 383, 479, 726, 1129, 1214, 1522, 1610
BstNI	CCWGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
BstNSI	RCATGY	2 cut(s)	232, 1617
BstPI	GGTNACC	1 cut(s)	1425
BstSCI	CCNGG	6 cut(s)	125, 138, 1094, 1136, 1191, 1397
BstSFI	CTRYAG	2 cut(s)	264, 798
BstUI	CGCG	1 cut(s)	1123
BstV1I	GCAGC	3 cut(s)	460, 806, 1522
BstV2I	GAAGAC	1 cut(s)	286
BstX2I	RGATCY	1 cut(s)	852
BstXI	CCANNNNNNTGG	1 cut(s)	739
BstYI	RGATCY	1 cut(s)	852
Bsu36I	CCTNAGG	1 cut(s)	750
BsuRI	GGCC	5 cut(s)	845, 932, 1089, 1289, 1531
BtgI	CCRYGG	3 cut(s)	840, 1500, 1526
BtsCI	GGATG	4 cut(s)	559, 1133, 1153, 1495
BtsI	GCAGTG	1 cut(s)	1722
BtsIMutI	CAGTG	6 cut(s)	348, 653, 996, 1172, 1224, 1722
Cac8I	GCNNGC	5 cut(s)	120, 230, 875, 1048, 1533
CaiI	CAGNNNCTG	4 cut(s)	173, 263, 377, 874
CciI	TCATGA	1 cut(s)	1566
CfoI	GCGC	1 cut(s)	1123
Cfr10I	RCCGGY	1 cut(s)	1531
Cfr13I	GGNCC	2 cut(s)	129, 284
Csp6I	GTAC	3 cut(s)	1099, 1481, 1683
CspCI	CAANNNNNGTGG	2 cut(s)	1011, 1046
CviQI	GTAC	3 cut(s)	1099, 1481, 1683
DdeI	CTNAG	5 cut(s)	104, 398, 495, 750, 1711
DpnI	GATC	5 cut(s)	204, 528, 854, 1253, 1319
DpnII	GATC	5 cut(s)	202, 526, 852, 1251, 1317
DraIII	CACNNNGTG	1 cut(s)	1506
EaeI	YGGCCR	3 cut(s)	843, 1287, 1529
Eam1104I	CTCTTC	5 cut(s)	176, 843, 1193, 1226, 1364
EarI	CTCTTC	5 cut(s)	176, 843, 1193, 1226, 1364
Ecl136II	GAGCTC	1 cut(s)	145
Eco130I	CCWWGG	3 cut(s)	840, 1146, 1526
Eco24I	GRGCYC	1 cut(s)	147
Eco32I	GATATC	1 cut(s)	969
Eco47I	GGWCC	2 cut(s)	129, 284
Eco53kI	GAGCTC	1 cut(s)	145
Eco81I	CCTNAGG	1 cut(s)	750
Eco91I	GGTNACC	1 cut(s)	1425
EcoICRI	GAGCTC	1 cut(s)	145
EcoNI	CCTNNNNNAGG	1 cut(s)	1161
EcoO65I	GGTNACC	1 cut(s)	1425
EcoRII	CCWGG	6 cut(s)	125, 138, 1094, 1136, 1191, 1397
EcoRV	GATATC	1 cut(s)	969
EcoT14I	CCWWGG	3 cut(s)	840, 1146, 1526
EcoT38I	GRGCYC	1 cut(s)	147
ErhI	CCWWGG	3 cut(s)	840, 1146, 1526
FalI	AAGNNNNNCTT	2 cut(s)	768, 800
FaqI	GGGAC	4 cut(s)	70, 768, 1028, 1209
FauNDI	CATATG	1 cut(s)	1607
FbaI	TGATCA	1 cut(s)	1317
Fnu4HI	GCNGC	4 cut(s)	474, 795, 1124, 1536
FokI	GGATG	4 cut(s)	566, 1120, 1140, 1482
FriOI	GRGCYC	1 cut(s)	147
Fsp4HI	GCNGC	4 cut(s)	474, 795, 1124, 1536
FspBI	CTAG	4 cut(s)	758, 1127, 1374, 1733
GlaI	GCGC	1 cut(s)	1122
GluI	GCNGC	4 cut(s)	474, 795, 1124, 1536
GsaI	CCCAGC	3 cut(s)	438, 593, 1423
HaeIII	GGCC	5 cut(s)	845, 932, 1089, 1289, 1531
HapII	CCGG	1 cut(s)	1532
HhaI	GCGC	1 cut(s)	1123
Hin6I	GCGC	1 cut(s)	1121
HinP1I	GCGC	1 cut(s)	1121
HincII	GTYRAC	1 cut(s)	1446
HindII	GTYRAC	1 cut(s)	1446
HindIII	AAGCTT	2 cut(s)	1048, 1403
HinfI	GANTC	5 cut(s)	77, 243, 827, 1197, 1702
HpaII	CCGG	1 cut(s)	1532
HphI	GGTGA	3 cut(s)	754, 1315, 1419
Hpy166II	GTNNAC	2 cut(s)	1446, 1651
Hpy188I	TCNGA	6 cut(s)	107, 401, 531, 973, 1001, 1439
Hpy188III	TCNNGA	3 cut(s)	74, 785, 1567
Hpy8I	GTNNAC	2 cut(s)	1446, 1651
Hpy99I	CGWCG	2 cut(s)	884, 1311
HpyAV	CCTTC	6 cut(s)	297, 338, 873, 1110, 1167, 1474
HpyCH4III	ACNGT	4 cut(s)	673, 765, 1450, 1641
HpyCH4IV	ACGT	1 cut(s)	1029
HpyCH4V	TGCA	9 cut(s)	314, 512, 720, 1046, 1153, 1203, 1217, 1538, 1720
HpyF10VI	GCNNNNNNNGC	8 cut(s)	234, 383, 479, 726, 1129, 1214, 1522, 1610
HpyF3I	CTNAG	5 cut(s)	104, 398, 495, 750, 1711
HpySE526I	ACGT	1 cut(s)	1029
HspAI	GCGC	1 cut(s)	1121
KpnI	GGTACC	2 cut(s)	1102, 1484
KroI	GCCGGC	1 cut(s)	1531
KroNI	GCCGGC	1 cut(s)	1533
Ksp22I	TGATCA	1 cut(s)	1317
Kzo9I	GATC	5 cut(s)	202, 526, 852, 1251, 1317
LmnI	GCTCC	3 cut(s)	142, 653, 726
Lsp1109I	GCAGC	3 cut(s)	460, 806, 1522
LweI	GCATC	4 cut(s)	894, 1162, 1217, 1503
MaeI	CTAG	4 cut(s)	758, 1127, 1374, 1733
MaeII	ACGT	1 cut(s)	1029
MaeIII	GTNAC	7 cut(s)	250, 344, 403, 812, 1025, 1425, 1450
MalI	GATC	5 cut(s)	204, 528, 854, 1253, 1319
MboI	GATC	5 cut(s)	202, 526, 852, 1251, 1317
MfeI	CAATTG	1 cut(s)	1212
MflI	RGATCY	1 cut(s)	852
MhlI	GDGCHC	2 cut(s)	147, 731
MlsI	TGGCCA	1 cut(s)	1289
MluCI	AATT	6 cut(s)	353, 366, 416, 705, 903, 1212
MluNI	TGGCCA	1 cut(s)	1289
MlyI	GAGTC	2 cut(s)	252, 1191
MmeI	TCCRAC	4 cut(s)	90, 202, 220, 561
Mox20I	TGGCCA	1 cut(s)	1289
MroNI	GCCGGC	1 cut(s)	1531
MscI	TGGCCA	1 cut(s)	1289
MseI	TTAA	3 cut(s)	774, 1407, 1554
Msp20I	TGGCCA	1 cut(s)	1289
MspA1I	CMGCKG	2 cut(s)	281, 593
MspI	CCGG	1 cut(s)	1532
MspR9I	CCNGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
MunI	CAATTG	1 cut(s)	1212
Mva1269I	GAATGC	2 cut(s)	120, 1183
MvaI	CCWGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
MvnI	CGCG	1 cut(s)	1123
MwoI	GCNNNNNNNGC	8 cut(s)	234, 383, 479, 726, 1129, 1214, 1522, 1610
NaeI	GCCGGC	1 cut(s)	1533
NcoI	CCATGG	2 cut(s)	840, 1526
NdeI	CATATG	1 cut(s)	1607
NdeII	GATC	5 cut(s)	202, 526, 852, 1251, 1317
NgoMIV	GCCGGC	1 cut(s)	1531
NlaIV	GGNNCC	6 cut(s)	131, 895, 954, 1100, 1264, 1482
NmuCI	GTSAC	3 cut(s)	250, 403, 1425
NspI	RCATGY	2 cut(s)	232, 1617
NspV	TTCGAA	1 cut(s)	1593
PaeI	GCATGC	1 cut(s)	232
PagI	TCATGA	1 cut(s)	1566
PcsI	WCGNNNNNNNCGW	2 cut(s)	1389, 1508
PctI	GAATGC	2 cut(s)	120, 1183
PdiI	GCCGGC	1 cut(s)	1533
PfeI	GAWTC	3 cut(s)	77, 827, 1702
PflMI	CCANNNNNTGG	2 cut(s)	377, 1506
PfoI	TCCNGGA	1 cut(s)	1397
PkrI	GCNGC	4 cut(s)	475, 796, 1125, 1537
PleI	GAGTC	2 cut(s)	251, 1191
PpsI	GAGTC	2 cut(s)	251, 1191
PsiI	TTATAA	2 cut(s)	704, 1662
Psp124BI	GAGCTC	1 cut(s)	147
Psp6I	CCWGG	6 cut(s)	125, 138, 1094, 1136, 1191, 1397
PspEI	GGTNACC	1 cut(s)	1425
PspFI	CCCAGC	3 cut(s)	434, 589, 1419
PspGI	CCWGG	6 cut(s)	125, 138, 1094, 1136, 1191, 1397
PspN4I	GGNNCC	6 cut(s)	131, 895, 954, 1100, 1264, 1482
PspPI	GGNCC	2 cut(s)	129, 284
PstNI	CAGNNNCTG	4 cut(s)	173, 263, 377, 874
PsuI	RGATCY	1 cut(s)	852
PvuII	CAGCTG	2 cut(s)	281, 593
RsaI	GTAC	3 cut(s)	1100, 1482, 1684
RsaNI	GTAC	3 cut(s)	1099, 1481, 1683
SacI	GAGCTC	1 cut(s)	147
SaqAI	TTAA	3 cut(s)	774, 1407, 1554
SatI	GCNGC	4 cut(s)	474, 795, 1124, 1536
Sau3AI	GATC	5 cut(s)	202, 526, 852, 1251, 1317
Sau96I	GGNCC	2 cut(s)	129, 284
ScaI	AGTACT	1 cut(s)	1684
SchI	GAGTC	2 cut(s)	252, 1191
ScrFI	CCNGG	6 cut(s)	127, 140, 1096, 1138, 1193, 1399
SduI	GDGCHC	2 cut(s)	147, 731
SfaNI	GCATC	4 cut(s)	894, 1162, 1217, 1503
SfcI	CTRYAG	2 cut(s)	264, 798
SfuI	TTCGAA	1 cut(s)	1593
SinI	GGWCC	2 cut(s)	129, 284
SmlI	CTYRAG	1 cut(s)	191
SmoI	CTYRAG	1 cut(s)	191
SphI	GCATGC	1 cut(s)	232
Sse9I	AATT	6 cut(s)	353, 366, 416, 705, 903, 1212
SsiI	CCGC	2 cut(s)	1123, 1430
SspMI	CTAG	4 cut(s)	758, 1127, 1374, 1733
SstI	GAGCTC	1 cut(s)	147
StyD4I	CCNGG	6 cut(s)	125, 138, 1094, 1136, 1191, 1397
StyI	CCWWGG	3 cut(s)	840, 1146, 1526
TaaI	ACNGT	4 cut(s)	673, 765, 1450, 1641
TaiI	ACGT	1 cut(s)	1032
TaqI	TCGA	6 cut(s)	75, 1233, 1309, 1511, 1593, 1655
TasI	AATT	6 cut(s)	353, 366, 416, 705, 903, 1212
TatI	WGTACW	1 cut(s)	1682
TauI	GCSGC	1 cut(s)	1126
TfiI	GAWTC	3 cut(s)	77, 827, 1702
Tru1I	TTAA	3 cut(s)	774, 1407, 1554
Tru9I	TTAA	3 cut(s)	774, 1407, 1554
TscAI	CASTG	6 cut(s)	355, 660, 996, 1179, 1231, 1722
TseFI	GTSAC	3 cut(s)	250, 403, 1425
TseI	GCWGC	3 cut(s)	473, 794, 1535
Tsp45I	GTSAC	3 cut(s)	250, 403, 1425
TspDTI	ATGAA	7 cut(s)	194, 286, 668, 1359, 1510, 1609, 1710
TspGWI	ACGGA	2 cut(s)	886, 1381
TspRI	CASTG	6 cut(s)	355, 660, 996, 1179, 1231, 1722
Van91I	CCANNNNNTGG	2 cut(s)	377, 1506
VpaK11BI	GGWCC	2 cut(s)	129, 284
XagI	CCTNNNNNAGG	1 cut(s)	1161
XapI	RAATTY	3 cut(s)	353, 366, 416
XceI	RCATGY	2 cut(s)	232, 1617
XcmI	CCANNNNNNNNNTGG	3 cut(s)	278, 1189, 1524
XspI	CTAG	4 cut(s)	758, 1127, 1374, 1733
ZrmI	AGTACT	1 cut(s)	1684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.