Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Forward (+)

5456175 .. 5461709

Gene Structure 5535 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g05050.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGAGGAGAGCCAGAGCCAATGCCATGCGTCGTCTTTCTCGAGCCCCCGGGCCTACCTCAGAGCTCTAGCTGACACTCCGGCCCGTCTGGCCCGCCGTGCCGTTTCAGTCTCCACCTCCTACGACGAAATGAGCGCCGTCCGCGCCCGCTCCGGCTCCGACATGCACAAGACCCTCGGCTGGTTGGACCTCCTCGGCTTCGGCTTCGGCGGCATGGTCGGCGCCGGAGTGTTCGTCACCACCGGCCGTGCCAGTCGCCTCTATGCCGGCCCTTCTGTGGTCATATCCTACGCCATTGCCGGCCTCTGCGCTCTTCTCTCCGCCTTCTGCTACACCGAGTTTGCCGTCGACATGCCCGTCGCAGGCGGCGCCTTCAGCTATCTCCGGGTCACATTCGGTGAATTCGCGGCCTTCTTGACCGGAGCCAACTTGATGATGGACTATGTGATGTCGAACGCCGCCGTTGCGAGGGGCTTCACGGCTTACTTGGGCACCGCAATTGGCGTCCCCGCCGCAAAATGGAGGTTCACAGTCGCCGCACTCCCCAACGGCTTCAATGAAATCGACGTCGTTGCTGTGGTCGTGGTCTTAGCGGTCACGCTCATTATCTGCTACAGTACAAGGGAGAGCTCGGTGGTCAATATGGTGTTGACGGCTCTGCATATAACATTCATATTATTCGTCATCGTGATCGGGTTCTGCAAAGGCGACTGGAACAACTTCACAGCACCGGCCGACCCGACCACGCATCCGTCCGGTTTTTTCCCGTACGGGATTGCCGGCGTGTTTAACGGGGCGAGCATGGTGTATCTGAGCTATATCGGATACGACGCCGTGTCGACCATGGCGGAAGAGGTGCGCAACCCCGTCAAGGACATTCCCATCGGAGTCTCCGGTTCCGTCCTCATCGTCACCCTTCTTTACTGTCTCATGGCGGCGTCCATGTCCAAACTGCTCCCCTACGATATGATCGACCCGGAGGCGCCGTTCTCGGCGGCGTTCAGAGGGAAATGGGAGGCGAGAGTGATCGGAGTGGGGGCCAGCCTGGGGATTCTGACGTCGCTGCTGGTGGCGATGCTGGGGCAGGCGAGGTACATGTGTGTCATCGGGCGATCCAGTGTGGTCCCCGCATGGTTCGCCAGGGTCCACCCCAAGACATCCACGCCGGTCAACTCTTCCGCTTTTCTCGGTATCTTAACCGCAGCAATTTCGCTTTTCACTGATCTGAATGTCCTACTCAATCTTGTATCCATTGGCACACTCTTTGTCTTTTACATGGTGGCCAATGCTGTGATTTTTAGGCGCTACGTTGCACTGGGGAGGACAAAACCATGGCCTACAATATCATTCCTGTGCTCCTTTTCTTTGACAGCAATCTTCTTCTCGGTGATCTGGCAAATTGCTCCACAGGGAAGAGCCAAAGCATTGATGCTTTGTGTTACTGCAATAATTGCAGCTTCAATCGTTCAAATTTTCCACTGCATGGTTAAACAAGCGCGAAAACCCGAATTCTGGGGCGTGCCTTTGATGCCATGGATGCCATCTGTCTCCATTTTCTTGAACGTCTTTCTGTTGGGGTCATTGGACAGACCATCCTATGTGAGATTTGGATACTTTTCAGGTTTTGCTGTGCTTGTGTATGTTTTCTACAGCGTTCATGCCAGCTTTGATGCACAAGGGAATGAGTCTTTCACTCAGAAGAATGGCGAAATCCACATAGAGTCTGCACAGGAAAGTAATGATCCAGGACTTAAAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

587

Amino Acids

63.24

Weight (kDa)

8.7

Isoelectric Point (pI)

39.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	59 - 469	7e-52	Amino acid permease
AA_permease	PF00324	68 - 436	2.3e-28	Amino acid permease
AA_permease_C	PF13906	505 - 555	6e-13	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	356
AatII	GACGTC	2 cut(s)	570, 1061
Acc16I	TGCGCA	1 cut(s)	860
AccB1I	GGYRCC	4 cut(s)	221, 368, 491, 982
AccB7I	CCANNNNNTGG	1 cut(s)	1483
AccBSI	CCGCTC	1 cut(s)	150
AccI	GTMKAC	2 cut(s)	348, 839
AccII	CGCG	3 cut(s)	144, 407, 1498
AclWI	GGATC	2 cut(s)	1107, 1736
AcoI	YGGCCR	3 cut(s)	244, 732, 1281
AcsI	RAATTY	3 cut(s)	401, 1470, 1508
AcuI	CTGAAG	1 cut(s)	358
AcyI	GRCGYC	8 cut(s)	222, 369, 504, 567, 831, 938, 983, 1058
AfaI	GTAC	3 cut(s)	619, 770, 1094
AfiI	CCNNNNNNNGG	9 cut(s)	180, 277, 362, 468, 519, 871, 1047, 1483, 1512
AflIII	ACRYGT	1 cut(s)	1095
AgsI	TTSAA	4 cut(s)	556, 1461, 1469, 1561
AhdI	GACNNNNNGTC	1 cut(s)	835
AjnI	CCWGG	3 cut(s)	1044, 1139, 1744
AloI	GAACNNNNNNTCC	2 cut(s)	971, 1003
AluBI	AGCT	7 cut(s)	65, 71, 378, 630, 816, 1457, 1665
AluI	AGCT	7 cut(s)	65, 71, 378, 630, 816, 1457, 1665
Alw21I	GWGCWC	3 cut(s)	67, 632, 1358
Alw26I	GTCTC	4 cut(s)	115, 895, 932, 1552
AlwI	GGATC	2 cut(s)	1107, 1736
Ama87I	CYCGRG	2 cut(s)	40, 48
ApeKI	GCWGC	3 cut(s)	1063, 1202, 1454
ApoI	RAATTY	3 cut(s)	401, 1470, 1508
Asp700I	GAANNNNTTC	1 cut(s)	719
AspLEI	GCGC	9 cut(s)	137, 146, 224, 311, 371, 861, 985, 1305, 1498
AspS9I	GGNCC	8 cut(s)	51, 82, 91, 187, 269, 1038, 1123, 1144
AsuC2I	CCSGG	4 cut(s)	49, 50, 386, 977
AsuHPI	GGTGA	4 cut(s)	229, 410, 904, 1399
AvaI	CYCGRG	2 cut(s)	40, 48
AvaII	GGWCC	3 cut(s)	187, 1123, 1144
BaeGI	GKGCMC	1 cut(s)	494
BaeI	ACNNNNGTAYC	2 cut(s)	1084, 1117
BalI	TGGCCA	1 cut(s)	1283
BanI	GGYRCC	4 cut(s)	221, 368, 491, 982
BanII	GRGCYC	3 cut(s)	47, 67, 632
Bbv12I	GWGCWC	3 cut(s)	67, 632, 1358
BbvI	GCAGC	3 cut(s)	1050, 1214, 1466
BccI	CCATC	4 cut(s)	430, 890, 1549, 1600
BcgI	CGANNNNNNTGC	4 cut(s)	554, 588, 1191, 1225
BciT130I	CCWGG	3 cut(s)	1046, 1141, 1746
BciVI	GTATCC	3 cut(s)	818, 1258, 1604
BcnI	CCSGG	4 cut(s)	49, 50, 386, 977
BcoDI	GTCTC	4 cut(s)	115, 895, 932, 1552
BfaI	CTAG	1 cut(s)	68
BfmI	CTRYAG	2 cut(s)	613, 1648
BfoI	RGCGCY	5 cut(s)	138, 225, 372, 986, 1306
BfuI	GTATCC	3 cut(s)	818, 1258, 1604
BglI	GCCNNNNNGGC	1 cut(s)	89
Bme1390I	CCNGG	7 cut(s)	49, 50, 386, 977, 1046, 1141, 1746
Bme18I	GGWCC	3 cut(s)	187, 1123, 1144
BmeRI	GACNNNNNGTC	1 cut(s)	835
BmeT110I	CYCGRG	2 cut(s)	40, 48
BmgT120I	GGNCC	8 cut(s)	51, 82, 91, 187, 269, 1038, 1123, 1144
BmrFI	CCNGG	7 cut(s)	49, 50, 386, 977, 1046, 1141, 1746
BmrI	ACTGGG	1 cut(s)	1325
BmsI	GCATC	6 cut(s)	757, 1065, 1419, 1518, 1527, 1660
BmuI	ACTGGG	1 cut(s)	1325
BpuMI	CCSGG	4 cut(s)	49, 50, 386, 977
BsaHI	GRCGYC	8 cut(s)	222, 369, 504, 567, 831, 938, 983, 1058
BsaJI	CCNNGG	9 cut(s)	47, 48, 175, 193, 843, 1045, 1140, 1331, 1532
BsaWI	WCCGGW	3 cut(s)	419, 755, 893
BsaXI	ACNNNNNCTCC	4 cut(s)	219, 249, 971, 1001
Bsc4I	CCNNNNNNNGG	9 cut(s)	180, 277, 362, 468, 519, 871, 1047, 1483, 1512
Bse118I	RCCGGY	6 cut(s)	242, 266, 299, 730, 779, 1165
Bse1I	ACTGG	4 cut(s)	252, 716, 1116, 1320
Bse3DI	GCAATG	1 cut(s)	294
BseBI	CCWGG	3 cut(s)	1046, 1141, 1746
BseDI	CCNNGG	9 cut(s)	47, 48, 175, 193, 843, 1045, 1140, 1331, 1532
BseGI	GGATG	4 cut(s)	748, 1157, 1542, 1592
BseLI	CCNNNNNNNGG	9 cut(s)	180, 277, 362, 468, 519, 871, 1047, 1483, 1512
BseMI	GCAATG	1 cut(s)	294
BseMII	CTCAG	3 cut(s)	73, 803, 1709
BseNI	ACTGG	4 cut(s)	252, 716, 1116, 1320
BseRI	GAGGAG	2 cut(s)	20, 182
BseSI	GKGCMC	1 cut(s)	494
BseX3I	CGGCCG	2 cut(s)	244, 732
BseXI	GCAGC	3 cut(s)	1050, 1214, 1466
BseYI	CCCAGC	1 cut(s)	1078
BsgI	GTGCAG	1 cut(s)	1710
Bsh1236I	CGCG	3 cut(s)	144, 407, 1498
Bsh1285I	CGRYCG	2 cut(s)	247, 735
BshNI	GGYRCC	4 cut(s)	221, 368, 491, 982
BsiEI	CGRYCG	2 cut(s)	247, 735
BsiHKAI	GWGCWC	3 cut(s)	67, 632, 1358
BsiHKCI	CYCGRG	2 cut(s)	40, 48
BsiWI	CGTACG	1 cut(s)	768
BslFI	GGGAC	2 cut(s)	491, 1109
BslI	CCNNNNNNNGG	9 cut(s)	180, 277, 362, 468, 519, 871, 1047, 1483, 1512
BsmAI	GTCTC	4 cut(s)	115, 895, 932, 1552
BsmFI	GGGAC	2 cut(s)	491, 1109
BsoBI	CYCGRG	2 cut(s)	40, 48
Bsp1286I	GDGCHC	5 cut(s)	47, 67, 494, 632, 1358
Bsp143I	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
Bsp19I	CCATGG	3 cut(s)	843, 1331, 1532
BspCNI	CTCAG	3 cut(s)	72, 804, 1708
BspFNI	CGCG	3 cut(s)	144, 407, 1498
BspPI	GGATC	2 cut(s)	1107, 1736
BspQI	GCTCTTC	2 cut(s)	318, 1408
BspT107I	GGYRCC	4 cut(s)	221, 368, 491, 982
BsrBI	CCGCTC	1 cut(s)	150
BsrDI	GCAATG	1 cut(s)	294
BsrFI	RCCGGY	6 cut(s)	242, 266, 299, 730, 779, 1165
BsrI	ACTGG	4 cut(s)	252, 716, 1116, 1320
BssAI	RCCGGY	6 cut(s)	242, 266, 299, 730, 779, 1165
BssECI	CCNNGG	9 cut(s)	47, 48, 175, 193, 843, 1045, 1140, 1331, 1532
BssMI	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
BssNI	GRCGYC	8 cut(s)	222, 369, 504, 567, 831, 938, 983, 1058
BssT1I	CCWWGG	3 cut(s)	843, 1331, 1532
Bst2UI	CCWGG	3 cut(s)	1046, 1141, 1746
Bst4CI	ACNGT	3 cut(s)	532, 617, 926
Bst6I	CTCTTC	4 cut(s)	318, 846, 1180, 1408
BstACI	GRCGYC	8 cut(s)	222, 369, 504, 567, 831, 938, 983, 1058
BstAPI	GCANNNNNTGC	1 cut(s)	1451
BstDEI	CTNAG	4 cut(s)	59, 589, 812, 1695
BstDSI	CCRYGG	3 cut(s)	843, 1331, 1532
BstF5I	GGATG	4 cut(s)	748, 1157, 1542, 1592
BstFNI	CGCG	3 cut(s)	144, 407, 1498
BstH2I	RGCGCY	5 cut(s)	138, 225, 372, 986, 1306
BstHHI	GCGC	9 cut(s)	137, 146, 224, 311, 371, 861, 985, 1305, 1498
BstKTI	GATC	7 cut(s)	693, 972, 1029, 1115, 1225, 1392, 1744
BstMAI	GTCTC	4 cut(s)	115, 895, 932, 1552
BstMBI	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
BstMCI	CGRYCG	2 cut(s)	247, 735
BstNI	CCWGG	3 cut(s)	1046, 1141, 1746
BstNSI	RCATGY	3 cut(s)	166, 355, 1099
BstSCI	CCNGG	7 cut(s)	47, 48, 384, 975, 1044, 1139, 1744
BstSFI	CTRYAG	2 cut(s)	613, 1648
BstSLI	GKGCMC	1 cut(s)	494
BstUI	CGCG	3 cut(s)	144, 407, 1498
BstV1I	GCAGC	3 cut(s)	1050, 1214, 1466
BstZI	CGGCCG	2 cut(s)	244, 732
BsuI	GTATCC	3 cut(s)	818, 1258, 1604
BtgI	CCRYGG	3 cut(s)	843, 1331, 1532
BtgZI	GCGATG	1 cut(s)	1088
BtsCI	GGATG	4 cut(s)	748, 1157, 1542, 1592
BtsI	GCAGTG	1 cut(s)	1477
BtsIMutI	CAGTG	4 cut(s)	1123, 1218, 1313, 1477
CfoI	GCGC	9 cut(s)	137, 146, 224, 311, 371, 861, 985, 1305, 1498
Cfr10I	RCCGGY	6 cut(s)	242, 266, 299, 730, 779, 1165
Cfr13I	GGNCC	8 cut(s)	51, 82, 91, 187, 269, 1038, 1123, 1144
Cfr9I	CCCGGG	1 cut(s)	48
CseI	GACGC	4 cut(s)	18, 493, 839, 927
Csp6I	GTAC	3 cut(s)	618, 769, 1093
CviQI	GTAC	3 cut(s)	618, 769, 1093
DdeI	CTNAG	4 cut(s)	59, 589, 812, 1695
DinI	GGCGCC	3 cut(s)	223, 370, 984
DpnI	GATC	7 cut(s)	692, 971, 1028, 1114, 1224, 1391, 1743
DpnII	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
DrdI	GACNNNNNNGTC	1 cut(s)	356
DriI	GACNNNNNGTC	1 cut(s)	835
DseDI	GACNNNNNNGTC	1 cut(s)	356
EaeI	YGGCCR	3 cut(s)	244, 732, 1281
EagI	CGGCCG	2 cut(s)	244, 732
Eam1104I	CTCTTC	4 cut(s)	318, 846, 1180, 1408
Eam1105I	GACNNNNNGTC	1 cut(s)	835
EarI	CTCTTC	4 cut(s)	318, 846, 1180, 1408
EciI	GGCGGA	2 cut(s)	310, 863
Ecl136II	GAGCTC	2 cut(s)	65, 630
EclXI	CGGCCG	2 cut(s)	244, 732
Eco130I	CCWWGG	3 cut(s)	843, 1331, 1532
Eco24I	GRGCYC	3 cut(s)	47, 67, 632
Eco47I	GGWCC	3 cut(s)	187, 1123, 1144
Eco52I	CGGCCG	2 cut(s)	244, 732
Eco53kI	GAGCTC	2 cut(s)	65, 630
Eco57I	CTGAAG	1 cut(s)	358
Eco88I	CYCGRG	2 cut(s)	40, 48
EcoICRI	GAGCTC	2 cut(s)	65, 630
EcoRI	GAATTC	2 cut(s)	401, 1508
EcoRII	CCWGG	3 cut(s)	1044, 1139, 1744
EcoT14I	CCWWGG	3 cut(s)	843, 1331, 1532
EcoT38I	GRGCYC	3 cut(s)	47, 67, 632
EgeI	GGCGCC	3 cut(s)	223, 370, 984
EheI	GGCGCC	3 cut(s)	223, 370, 984
ErhI	CCWWGG	3 cut(s)	843, 1331, 1532
FaqI	GGGAC	2 cut(s)	491, 1109
FauI	CCCGC	4 cut(s)	101, 155, 517, 1135
FblI	GTMKAC	2 cut(s)	348, 839
FokI	GGATG	4 cut(s)	735, 1144, 1549, 1579
FriOI	GRGCYC	3 cut(s)	47, 67, 632
FspBI	CTAG	1 cut(s)	68
FspI	TGCGCA	1 cut(s)	860
GlaI	GCGC	9 cut(s)	136, 145, 223, 310, 370, 860, 984, 1304, 1497
GsaI	CCCAGC	1 cut(s)	1082
HaeII	RGCGCY	5 cut(s)	138, 225, 372, 986, 1306
HgaI	GACGC	4 cut(s)	18, 493, 839, 927
HhaI	GCGC	9 cut(s)	137, 146, 224, 311, 371, 861, 985, 1305, 1498
Hin1I	GRCGYC	8 cut(s)	222, 369, 504, 567, 831, 938, 983, 1058
Hin6I	GCGC	9 cut(s)	135, 144, 222, 309, 369, 859, 983, 1303, 1496
HinP1I	GCGC	9 cut(s)	135, 144, 222, 309, 369, 859, 983, 1303, 1496
HincII	GTYRAC	4 cut(s)	349, 651, 840, 1171
HindII	GTYRAC	4 cut(s)	349, 651, 840, 1171
HinfI	GANTC	4 cut(s)	888, 1051, 1685, 1721
HphI	GGTGA	4 cut(s)	229, 410, 904, 1399
Hpy166II	GTNNAC	6 cut(s)	349, 528, 651, 840, 1147, 1171
Hpy188III	TCNNGA	4 cut(s)	40, 415, 688, 1558
Hpy8I	GTNNAC	6 cut(s)	349, 528, 651, 840, 1147, 1171
Hpy99I	CGWCG	8 cut(s)	34, 128, 350, 362, 569, 572, 833, 1063
HpyAV	CCTTC	5 cut(s)	282, 334, 382, 421, 926
HpyCH4III	ACNGT	3 cut(s)	532, 617, 926
HpyCH4IV	ACGT	4 cut(s)	567, 1058, 1308, 1563
HpyCH4V	TGCA	9 cut(s)	166, 661, 702, 1313, 1445, 1454, 1482, 1673, 1727
HpyF3I	CTNAG	4 cut(s)	59, 589, 812, 1695
HpySE526I	ACGT	4 cut(s)	567, 1058, 1308, 1563
Hsp92I	GRCGYC	8 cut(s)	222, 369, 504, 567, 831, 938, 983, 1058
HspAI	GCGC	9 cut(s)	135, 144, 222, 309, 369, 859, 983, 1303, 1496
KasI	GGCGCC	3 cut(s)	221, 368, 982
KroI	GCCGGC	3 cut(s)	266, 299, 779
KroNI	GCCGGC	3 cut(s)	268, 301, 781
Kzo9I	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
LguI	GCTCTTC	2 cut(s)	318, 1408
LmnI	GCTCC	6 cut(s)	155, 161, 422, 960, 1361, 1408
Lsp1109I	GCAGC	3 cut(s)	1050, 1214, 1466
LweI	GCATC	6 cut(s)	757, 1065, 1419, 1518, 1527, 1660
MaeI	CTAG	1 cut(s)	68
MaeII	ACGT	4 cut(s)	567, 1058, 1308, 1563
MaeIII	GTNAC	5 cut(s)	235, 388, 595, 910, 1438
MalI	GATC	7 cut(s)	692, 971, 1028, 1114, 1224, 1391, 1743
MbiI	CCGCTC	1 cut(s)	150
MboI	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
MboII	GAAGA	7 cut(s)	305, 863, 1167, 1369, 1372, 1425, 1711
MfeI	CAATTG	1 cut(s)	498
MhlI	GDGCHC	5 cut(s)	47, 67, 494, 632, 1358
MlsI	TGGCCA	1 cut(s)	1283
MluCI	AATT	7 cut(s)	401, 498, 1206, 1398, 1449, 1470, 1508
MluNI	TGGCCA	1 cut(s)	1283
Mly113I	GGCGCC	3 cut(s)	222, 369, 983
MlyI	GAGTC	3 cut(s)	897, 1694, 1730
MmeI	TCCRAC	2 cut(s)	165, 183
Mox20I	TGGCCA	1 cut(s)	1283
MroNI	GCCGGC	3 cut(s)	266, 299, 779
MroXI	GAANNNNTTC	1 cut(s)	719
MscI	TGGCCA	1 cut(s)	1283
MseI	TTAA	4 cut(s)	789, 1196, 1488, 1752
MslI	CAYNNNNRTG	1 cut(s)	1351
Msp20I	TGGCCA	1 cut(s)	1283
MspR9I	CCNGG	7 cut(s)	49, 50, 386, 977, 1046, 1141, 1746
MunI	CAATTG	1 cut(s)	498
MvaI	CCWGG	3 cut(s)	1046, 1141, 1746
MvnI	CGCG	3 cut(s)	144, 407, 1498
NaeI	GCCGGC	3 cut(s)	268, 301, 781
NarI	GGCGCC	3 cut(s)	222, 369, 983
NciI	CCSGG	4 cut(s)	49, 50, 386, 977
NcoI	CCATGG	3 cut(s)	843, 1331, 1532
NdeII	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
NgoMIV	GCCGGC	3 cut(s)	266, 299, 779
NmeAIII	GCCGAG	3 cut(s)	156, 174, 971
NmuCI	GTSAC	4 cut(s)	235, 388, 595, 910
NsbI	TGCGCA	1 cut(s)	860
NspI	RCATGY	3 cut(s)	166, 355, 1099
PaeR7I	CTCGAG	1 cut(s)	40
PciI	ACATGT	1 cut(s)	1095
PciSI	GCTCTTC	2 cut(s)	318, 1408
PcsI	WCGNNNNNNNCGW	3 cut(s)	38, 354, 969
PdiI	GCCGGC	3 cut(s)	268, 301, 781
PdmI	GAANNNNTTC	1 cut(s)	719
PfeI	GAWTC	1 cut(s)	1051
Pfl23II	CGTACG	1 cut(s)	768
PflMI	CCANNNNNTGG	1 cut(s)	1483
PfoI	TCCNGGA	1 cut(s)	1744
PleI	GAGTC	3 cut(s)	896, 1693, 1729
PluTI	GGCGCC	3 cut(s)	225, 372, 986
PpsI	GAGTC	3 cut(s)	896, 1693, 1729
PscI	ACATGT	1 cut(s)	1095
Psp124BI	GAGCTC	2 cut(s)	67, 632
Psp6I	CCWGG	3 cut(s)	1044, 1139, 1744
PspFI	CCCAGC	1 cut(s)	1078
PspGI	CCWGG	3 cut(s)	1044, 1139, 1744
PspLI	CGTACG	1 cut(s)	768
PspPI	GGNCC	8 cut(s)	51, 82, 91, 187, 269, 1038, 1123, 1144
RsaI	GTAC	3 cut(s)	619, 770, 1094
RsaNI	GTAC	3 cut(s)	618, 769, 1093
RseI	CAYNNNNRTG	1 cut(s)	1351
SacI	GAGCTC	2 cut(s)	67, 632
SalI	GTCGAC	2 cut(s)	347, 838
SapI	GCTCTTC	2 cut(s)	318, 1408
SaqAI	TTAA	4 cut(s)	789, 1196, 1488, 1752
Sau3AI	GATC	7 cut(s)	690, 969, 1026, 1112, 1222, 1389, 1741
Sau96I	GGNCC	8 cut(s)	51, 82, 91, 187, 269, 1038, 1123, 1144
SchI	GAGTC	3 cut(s)	897, 1694, 1730
ScrFI	CCNGG	7 cut(s)	49, 50, 386, 977, 1046, 1141, 1746
SduI	GDGCHC	5 cut(s)	47, 67, 494, 632, 1358
SfaNI	GCATC	6 cut(s)	757, 1065, 1419, 1518, 1527, 1660
SfcI	CTRYAG	2 cut(s)	613, 1648
SfiI	GGCCNNNNNGGCC	1 cut(s)	89
SfoI	GGCGCC	3 cut(s)	223, 370, 984
Sfr274I	CTCGAG	1 cut(s)	40
SinI	GGWCC	3 cut(s)	187, 1123, 1144
SlaI	CTCGAG	1 cut(s)	40
SmaI	CCCGGG	1 cut(s)	50
SmiMI	CAYNNNNRTG	1 cut(s)	1351
SmlI	CTYRAG	1 cut(s)	40
SmoI	CTYRAG	1 cut(s)	40
Sse9I	AATT	7 cut(s)	401, 498, 1206, 1398, 1449, 1470, 1508
SspDI	GGCGCC	3 cut(s)	221, 368, 982
SspMI	CTAG	1 cut(s)	68
SstI	GAGCTC	2 cut(s)	67, 632
StyD4I	CCNGG	7 cut(s)	47, 48, 384, 975, 1044, 1139, 1744
StyI	CCWWGG	3 cut(s)	843, 1331, 1532
TaaI	ACNGT	3 cut(s)	532, 617, 926
TaiI	ACGT	4 cut(s)	570, 1061, 1311, 1566
TaqI	TCGA	6 cut(s)	41, 348, 452, 564, 839, 972
TasI	AATT	7 cut(s)	401, 498, 1206, 1398, 1449, 1470, 1508
TatI	WGTACW	1 cut(s)	617
TauI	GCSGC	8 cut(s)	213, 369, 410, 461, 515, 539, 938, 998
TfiI	GAWTC	1 cut(s)	1051
Tru1I	TTAA	4 cut(s)	789, 1196, 1488, 1752
Tru9I	TTAA	4 cut(s)	789, 1196, 1488, 1752
TscAI	CASTG	4 cut(s)	1123, 1225, 1320, 1484
TseFI	GTSAC	4 cut(s)	235, 388, 595, 910
TseI	GCWGC	3 cut(s)	1063, 1202, 1454
Tsp45I	GTSAC	4 cut(s)	235, 388, 595, 910
TspDTI	ATGAA	3 cut(s)	573, 661, 1646
TspGWI	ACGGA	2 cut(s)	741, 889
TspMI	CCCGGG	1 cut(s)	48
TspRI	CASTG	4 cut(s)	1123, 1225, 1320, 1484
Van91I	CCANNNNNTGG	1 cut(s)	1483
VpaK11BI	GGWCC	3 cut(s)	187, 1123, 1144
XapI	RAATTY	3 cut(s)	401, 1470, 1508
XceI	RCATGY	3 cut(s)	166, 355, 1099
XcmI	CCANNNNNNNNNTGG	1 cut(s)	433
XhoI	CTCGAG	1 cut(s)	40
XmaI	CCCGGG	1 cut(s)	48
XmiI	GTMKAC	2 cut(s)	348, 839
XmnI	GAANNNNTTC	1 cut(s)	719
XspI	CTAG	1 cut(s)	68
ZraI	GACGTC	2 cut(s)	568, 1059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.